Citrus Sinensis ID: 041447

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
Protein Sequence
SWVFISKVLVVLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG
Secondary Structure (PSIPRED)
ccEEEEHHHHHHccccccccHHHHHHHHHcccccccccccccccEEEEEEEccccEEEEEEcccccccHHHHHHHHHHHHcccccccccEEEEEccccEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHcccccEEcHHHHHHHHHccccHHccccccccccEEEEEcccccEEEEEEEcccccccHHHHHHHHHHHHHccccccEEEEEEEccccEEEEEEEcccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
SWVFISKVLVVLNrsvdnpsyEDLRKLLDSGLdltwssgkdgfgsvykgqlhtGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYeympngsldrhifpnegrgksfswEKLHEVALGTARgieylhng
Flexible Loop (DISEMBL)
SWVFISKVLVVlnrsvdnpsyEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGtargieylhng
Low Complexity Region (SEG)
SWVFISKVLVVLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG
Disordered region (IsUnstruct)
*WVFISKVLVVLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL***
Disordered Region (DISOPRED)
SWV****VL****RSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN*
Disordered Region (DISEMBL)
SWVFISKVLVVLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG
Disordered Region (DISPRO)
SWVFISKVLVVLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
SWVFISKVLVVLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	148	2.2.26 [Sep-21-2011]
O64477	828	G-type lectin S-receptor-	no	no	0.831	0.148	0.5	3e-25
Q9FID5	806	Probable receptor-like pr	no	no	0.898	0.165	0.443	7e-25
Q9FLV4	872	G-type lectin S-receptor-	no	no	0.885	0.150	0.439	2e-23
Q3ECH2	892	Probable receptor-like pr	no	no	0.837	0.139	0.430	3e-23
Q9FID6	813	Probable receptor-like pr	no	no	0.817	0.148	0.446	1e-22
Q9XID3	829	G-type lectin S-receptor-	no	no	0.722	0.129	0.481	2e-21
Q9M0X5	675	Cysteine-rich receptor-li	no	no	0.722	0.158	0.458	2e-21
O65238	872	G-type lectin S-receptor-	no	no	0.864	0.146	0.419	3e-21
Q9CAL3	649	Cysteine-rich receptor-li	no	no	0.945	0.215	0.426	4e-21
Q9XEC8	648	Cysteine-rich receptor-li	no	no	0.831	0.189	0.448	5e-21

>sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1

 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/124 (50%), Positives = 81/124 (65%), Gaps = 1/124 (0%)

Query: 25  RKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHH 84
           R+L ++  + +   G  GFGSV+KG L     IAVK LE  +    +F  EV TIG I H
Sbjct: 486 RELQNATKNFSDKLGGGGFGSVFKGALPDSSDIAVKRLEGISQGEKQFRTEVVTIGTIQH 545

Query: 85  VNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGK-SFSWEKLHEVALGTARGIE 143
           VN+V+L GF SEGSK+ LVY+YMPNGSLD H+F N+   K    W+   ++ALGTARG+ 
Sbjct: 546 VNLVRLRGFCSEGSKKLLVYDYMPNGSLDSHLFLNQVEEKIVLGWKLRFQIALGTARGLA 605

Query: 144 YLHN 147
           YLH+
Sbjct: 606 YLHD 609

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9FID5|Y5393_ARATH Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1

 Score =  112 bits (280), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 63/142 (44%), Positives = 95/142 (66%), Gaps = 9/142 (6%)

Query: 9   LVVLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS 68
           +V+  + ++  +Y +L+K+  S    ++  GK GFG+VY G L  G  +AVK+L++   S
Sbjct: 478 VVMFKKLLNMYTYAELKKITKS---FSYIIGKGGFGTVYGGNLSNGRKVAVKVLKDLKGS 534

Query: 69  AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSW 128
           A +FINEV+++ +  HVN+V LLGF  EGSKRA+VYE++ NGSLD+ +     R KS + 
Sbjct: 535 AEDFINEVASMSQTSHVNIVSLLGFCFEGSKRAIVYEFLENGSLDQFM----SRNKSLTQ 590

Query: 129 E--KLHEVALGTARGIEYLHNG 148
           +   L+ +ALG ARG+EYLH G
Sbjct: 591 DVTTLYGIALGIARGLEYLHYG 612

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/132 (43%), Positives = 79/132 (59%), Gaps = 1/132 (0%)

Query: 16  VDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENS-NFSAVEFIN 74
            D+P     R L +   + +   G  GFG+VYKG +    L+AVK L+ + +    EFI 
Sbjct: 514 CDSPVSFTYRDLQNCTNNFSQLLGSGGFGTVYKGTVAGETLVAVKRLDRALSHGEREFIT 573

Query: 75  EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
           EV+TIG +HH+N+V+L G+ SE S R LVYEYM NGSLD+ IF +E       W    E+
Sbjct: 574 EVNTIGSMHHMNLVRLCGYCSEDSHRLLVYEYMINGSLDKWIFSSEQTANLLDWRTRFEI 633

Query: 135 ALGTARGIEYLH 146
           A+ TA+GI Y H
Sbjct: 634 AVATAQGIAYFH 645

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q3ECH2|Y1670_ARATH Probable receptor-like protein kinase At1g67000 OS=Arabidopsis thaliana GN=At1g67000 PE=2 SV=2

 Score =  107 bits (266), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 56/130 (43%), Positives = 86/130 (66%), Gaps = 6/130 (4%)

Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE-FINEVST 78
           +Y +++K+  S    T   G+ GFG VY G L    ++AVK+L++S  +  E FINEV++
Sbjct: 547 TYAEVKKMTKS---FTEVVGRGGFGIVYSGTLSDSSMVAVKVLKDSKGTDGEDFINEVAS 603

Query: 79  IGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGT 138
           + +  HVN+V LLGF  EGS+RA++YE++ NGSLD+  F ++    +   + L+ +ALG 
Sbjct: 604 MSQTSHVNIVSLLGFCCEGSRRAIIYEFLGNGSLDK--FISDKSSVNLDLKTLYGIALGV 661

Query: 139 ARGIEYLHNG 148
           ARG+EYLH G
Sbjct: 662 ARGLEYLHYG 671

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FID6|Y5392_ARATH Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 86/130 (66%), Gaps = 9/130 (6%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIG 80
           Y +L+K+  S    + + GK GFG+VY+G L  G  +AVK+L++   +  +FINEV+++ 
Sbjct: 488 YAELKKITKS---FSHTVGKGGFGTVYRGNLSNGRTVAVKVLKDLKGNGDDFINEVTSMS 544

Query: 81  RIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWE--KLHEVALGT 138
           +  HVN+V LLGF  EGSKRA++ E++ +GSLD+ I     R KS +     L+ +ALG 
Sbjct: 545 QTSHVNIVSLLGFCYEGSKRAIISEFLEHGSLDQFI----SRNKSLTPNVTTLYGIALGI 600

Query: 139 ARGIEYLHNG 148
           ARG+EYLH G
Sbjct: 601 ARGLEYLHYG 610

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana GN=At1g34300 PE=1 SV=1

 Score =  101 bits (252), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 69/108 (63%), Gaps = 1/108 (0%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G  GFG+VY+G L    ++AVK LE       +F  EV+TI   HH+N+V+L+GF S+G 
Sbjct: 491 GAGGFGTVYRGVLTNRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSQGR 550

Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
            R LVYE+M NGSLD  +F  +   K  +WE    +ALGTA+GI YLH
Sbjct: 551 HRLLVYEFMRNGSLDNFLFTTDS-AKFLTWEYRFNIALGTAKGITYLH 597

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1

 Score =  101 bits (252), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 2/109 (1%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKML-ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
           G  GFG VYKGQL TG  +A+K L + S   A EF NEV  + ++ H N+ +LLG+  +G
Sbjct: 354 GHGGFGEVYKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDG 413

Query: 98  SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
            ++ LVYE++PN SLD  +F NE R +   W++ +++  G ARGI YLH
Sbjct: 414 EEKILVYEFVPNKSLDYFLFDNEKR-RVLDWQRRYKIIEGIARGILYLH 461

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O65238|Y5537_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2

 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/131 (41%), Positives = 76/131 (58%), Gaps = 3/131 (2%)

Query: 19  PSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSA-VEFINEVS 77
           P   +  +L  +  +     G  GFGSVYKG L    LIAVK + N       EF  E++
Sbjct: 502 PQKFEFEELEQATENFKMQIGSGGFGSVYKGTLPDETLIAVKKITNHGLHGRQEFCTEIA 561

Query: 78  TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
            IG I H N+V+L GF + G +  LVYEYM +GSL++ +F   G G    W++  ++ALG
Sbjct: 562 IIGNIRHTNLVKLRGFCARGRQLLLVYEYMNHGSLEKTLF--SGNGPVLEWQERFDIALG 619

Query: 138 TARGIEYLHNG 148
           TARG+ YLH+G
Sbjct: 620 TARGLAYLHSG 630

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9CAL3|CRK2_ARATH Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1

 Score =  100 bits (248), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 61/143 (42%), Positives = 81/143 (56%), Gaps = 3/143 (2%)

Query: 5   ISKVLVVLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLE- 63
           + K+   L  S  N  Y  L K   S  D     G+ GFG+VYKG L  G  IAVK L  
Sbjct: 299 VEKMAKTLKDSSLNFKYSTLEKATGS-FDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFF 357

Query: 64  NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRG 123
           N+   A +F NEV+ I  + H N+V+LLG    G +  LVYEY+ N SLDR IF +  RG
Sbjct: 358 NNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIF-DVNRG 416

Query: 124 KSFSWEKLHEVALGTARGIEYLH 146
           K+  W++ + + +GTA G+ YLH
Sbjct: 417 KTLDWQRRYTIIVGTAEGLVYLH 439

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9XEC8|CRK38_ARATH Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=3 SV=1

 Score = 99.8 bits (247), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 4/127 (3%)

Query: 23  DLRKLLDSGLDLTWSS--GKDGFGSVYKGQLHTGGLIAVKML-ENSNFSAVEFINEVSTI 79
           D R +L +  D ++ +  G+ GFGSVYKG+L  G  IAVK L   S    +EF NEV  +
Sbjct: 328 DFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQGEIEFRNEVLLL 387

Query: 80  GRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA 139
            R+ H N+V+LLGF +EG +  LVYE++PN SLD  IF  E R    +W+    +  G A
Sbjct: 388 TRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKR-LLLTWDMRARIIEGVA 446

Query: 140 RGIEYLH 146
           RG+ YLH
Sbjct: 447 RGLVYLH 453

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	148
147801082	590	hypothetical protein VITISV_037666 [Viti	0.851	0.213	0.573	2e-36
359495102	603	PREDICTED: probable receptor-like protei	0.851	0.208	0.569	8e-36
359496297	252	PREDICTED: probable receptor-like protei	0.851	0.5	0.573	6e-35
359490857	660	PREDICTED: probable receptor-like protei	0.851	0.190	0.550	1e-34
302144044	462	unnamed protein product [Vitis vinifera]	0.851	0.272	0.550	1e-34
225455649	495	PREDICTED: probable receptor-like protei	0.851	0.254	0.565	2e-34
224132672	349	predicted protein [Populus trichocarpa]	0.844	0.358	0.581	3e-34
225455116	608	PREDICTED: probable receptor-like protei	0.743	0.180	0.627	3e-34
224132918	219	predicted protein [Populus trichocarpa]	0.844	0.570	0.558	4e-34
359496672	682	PREDICTED: probable receptor-like protei	0.851	0.184	0.550	5e-34

>gi|147801082|emb|CAN71175.1| hypothetical protein VITISV_037666 [Vitis vinifera]

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 74/129 (57%), Positives = 98/129 (75%), Gaps = 3/129 (2%)

Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTI 79
           SY +++K+       T   G+ G+GSVYKG+L +G L+AVKML NS  +  +FINEV+TI
Sbjct: 289 SYSNIKKMTKG---FTEKLGEGGYGSVYKGKLXSGHLVAVKMLANSKANGQDFINEVATI 345

Query: 80  GRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA 139
           GRIHH NVVQL+GF  EGSKRALVY++MPNGSLD++IFP +    S S+EK+++++LG A
Sbjct: 346 GRIHHFNVVQLIGFCVEGSKRALVYDFMPNGSLDKYIFPEKEEXISLSFEKMYQISLGVA 405

Query: 140 RGIEYLHNG 148
            GIEYLH G
Sbjct: 406 HGIEYLHRG 414

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495102|ref|XP_002263106.2| PREDICTED: probable receptor-like protein kinase At1g67000-like [Vitis vinifera]

 Score =  154 bits (390), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 74/130 (56%), Positives = 99/130 (76%), Gaps = 4/130 (3%)

Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTI 79
           SY +++K+    ++     G+ G+GSVYKG+L +G  +AVKM+ NS  +  +FINEV+TI
Sbjct: 283 SYSNIKKMTKGFME---KLGEGGYGSVYKGKLRSGHFVAVKMMANSKANGQDFINEVATI 339

Query: 80  GRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP-NEGRGKSFSWEKLHEVALGT 138
           GRIHHVNVVQL+GF +EGSKRALVY++MPNGSLD++IFP  EG     S EK++E++LG 
Sbjct: 340 GRIHHVNVVQLIGFCAEGSKRALVYDFMPNGSLDKYIFPEKEGNISLLSLEKMYEISLGV 399

Query: 139 ARGIEYLHNG 148
           A GIEYLH G
Sbjct: 400 AYGIEYLHRG 409

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496297|ref|XP_003635201.1| PREDICTED: probable receptor-like protein kinase At1g67000-like, partial [Vitis vinifera]

 Score =  152 bits (383), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 74/129 (57%), Positives = 98/129 (75%), Gaps = 3/129 (2%)

Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTI 79
           SY +++K+       T   G+ G+GSVYKG+L +G L+AVKML NS  +  +FINEV+TI
Sbjct: 27  SYSNIKKMTKG---FTEKLGEGGYGSVYKGKLTSGHLVAVKMLANSKANGQDFINEVATI 83

Query: 80  GRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA 139
           GRIHH NVVQL+GF  EGSKRALVY++MPNGSLD++IFP +    S S+EK+++++LG A
Sbjct: 84  GRIHHFNVVQLIGFCVEGSKRALVYDFMPNGSLDKYIFPEKEEHISLSFEKMYQISLGVA 143

Query: 140 RGIEYLHNG 148
            GIEYLH G
Sbjct: 144 HGIEYLHRG 152

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490857|ref|XP_002268692.2| PREDICTED: probable receptor-like protein kinase At1g67000-like [Vitis vinifera]

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 71/129 (55%), Positives = 96/129 (74%), Gaps = 3/129 (2%)

Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTI 79
           SY +++K+ D   +   S GK GFGSVYKG+L +G ++AVK+L  S  +  +FINEV+TI
Sbjct: 331 SYSEIKKMTD---NFKTSLGKGGFGSVYKGKLQSGSIVAVKVLATSKANGEDFINEVATI 387

Query: 80  GRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA 139
           GRIHH+NVV+L+GF + GSK AL+Y++MPNGSLD++IF         SWE L+++ALG A
Sbjct: 388 GRIHHMNVVRLIGFCANGSKWALIYDFMPNGSLDKYIFLKRENSVYLSWEMLYKIALGIA 447

Query: 140 RGIEYLHNG 148
           RGIEYLH G
Sbjct: 448 RGIEYLHRG 456

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302144044|emb|CBI23149.3| unnamed protein product [Vitis vinifera]

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 71/129 (55%), Positives = 94/129 (72%), Gaps = 3/129 (2%)

Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTI 79
           SY +++K+ +   D     G+ GFGSVYKG+L +G ++AVKML  S  +  +FINEV+TI
Sbjct: 134 SYSEIKKITNGFKD---KLGQGGFGSVYKGKLRSGCIVAVKMLVMSKTNGQDFINEVATI 190

Query: 80  GRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA 139
           GRIHHVNVV+L+GF  EG K AL+Y++MPNGSLD++IFP        SWE L+++ALG  
Sbjct: 191 GRIHHVNVVRLIGFCVEGPKWALIYDFMPNGSLDKYIFPERKNSVPLSWEILYKIALGVG 250

Query: 140 RGIEYLHNG 148
           RGIEYLH G
Sbjct: 251 RGIEYLHQG 259

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455649|ref|XP_002263232.1| PREDICTED: probable receptor-like protein kinase At5g39020-like [Vitis vinifera]

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/129 (56%), Positives = 98/129 (75%), Gaps = 3/129 (2%)

Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTI 79
           SY +L+K+     +     G+ GFGSVYKG+L +G ++AVKML  S  +  +FINEV+TI
Sbjct: 171 SYSELKKMTH---NFKNKLGQGGFGSVYKGKLRSGRIVAVKMLVMSKANGQDFINEVATI 227

Query: 80  GRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA 139
           GRIHHVNVV+L+GFY +GSK ALVY++MPNGSLD+ +F ++G     SWE+L+++ALG A
Sbjct: 228 GRIHHVNVVRLVGFYIQGSKWALVYDFMPNGSLDKFVFLDQGNNIPLSWERLYKIALGVA 287

Query: 140 RGIEYLHNG 148
           RGIEYLH G
Sbjct: 288 RGIEYLHQG 296

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224132672|ref|XP_002327852.1| predicted protein [Populus trichocarpa] gi|222837261|gb|EEE75640.1| predicted protein [Populus trichocarpa]

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/129 (58%), Positives = 95/129 (73%), Gaps = 4/129 (3%)

Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTI 79
           SY D+RK+     D     GK GFG+VYKG+L +G   A+K+L  S  +  +FINEV+TI
Sbjct: 44  SYSDIRKITRGFKD---ELGKGGFGTVYKGKLRSGRFAAIKLLGKSKANGQDFINEVATI 100

Query: 80  GRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA 139
           GRIHH NVVQL+GF +EGSKRALVY++MPNGSLD H+F  EG   S SW+KLH+++LG A
Sbjct: 101 GRIHHTNVVQLIGFCAEGSKRALVYDFMPNGSLDSHLFSQEG-SISLSWQKLHQISLGVA 159

Query: 140 RGIEYLHNG 148
            GI+YLH G
Sbjct: 160 CGIDYLHLG 168

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455116|ref|XP_002268775.1| PREDICTED: probable receptor-like protein kinase At1g67000-like [Vitis vinifera]

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 91/110 (82%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G+ G+GSVYKG+L +G L+AVK++ NS  +  +FINEV+TIG+IHHVNVVQLLGF  EGS
Sbjct: 305 GEGGYGSVYKGKLRSGHLVAVKLMTNSKSNGQDFINEVATIGKIHHVNVVQLLGFCVEGS 364

Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
           KRALVY++MPNGSLD++IFP +    S S+EK+++++LG A GIEYLH G
Sbjct: 365 KRALVYDFMPNGSLDKYIFPEKEGNISLSFEKMYQISLGVAHGIEYLHRG 414

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224132918|ref|XP_002321441.1| predicted protein [Populus trichocarpa] gi|222868437|gb|EEF05568.1| predicted protein [Populus trichocarpa]

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 72/129 (55%), Positives = 99/129 (76%), Gaps = 4/129 (3%)

Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTI 79
           SY D++K+ +         G+ G+GSVYKG+L +G L AVKML+ S+ +  +FINEV+TI
Sbjct: 21  SYSDIKKITNG---FKEKLGQGGYGSVYKGKLRSGHLAAVKMLDKSSANGQDFINEVATI 77

Query: 80  GRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA 139
           GRIHHVNVV+L+GF +EGSKRALVY++MPNGSLD+++   +G     SW+K++E++LG A
Sbjct: 78  GRIHHVNVVRLIGFCAEGSKRALVYDFMPNGSLDKYVLSRQGN-TILSWQKMYEISLGVA 136

Query: 140 RGIEYLHNG 148
           RGIEYLH G
Sbjct: 137 RGIEYLHRG 145

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496672|ref|XP_002267570.2| PREDICTED: probable receptor-like protein kinase At1g67000-like [Vitis vinifera]

 Score =  149 bits (375), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 71/129 (55%), Positives = 94/129 (72%), Gaps = 3/129 (2%)

Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTI 79
           SY D++K+ +S  D     G+ GFGSVYKG+L +G ++AVK+L  S     +FINEV+TI
Sbjct: 354 SYYDIKKMTNSFKD---KLGQGGFGSVYKGKLKSGRVVAVKVLVMSKADGQDFINEVATI 410

Query: 80  GRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA 139
           GRIHH+NVV+L+GF  EGSK AL+Y++MPNGSLD+ IFP        SWE+L+++ALG  
Sbjct: 411 GRIHHINVVKLVGFCIEGSKWALIYDFMPNGSLDKFIFPKHENNTPLSWERLYKIALGVG 470

Query: 140 RGIEYLHNG 148
            GIEYLH G
Sbjct: 471 HGIEYLHQG 479

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	148
TAIR|locus:2204480	666	AT1G66910 [Arabidopsis thalian	0.729	0.162	0.509	5.4e-27
TAIR|locus:2176737	665	PR5K "PR5-like receptor kinase	0.831	0.184	0.488	2.1e-26
TAIR|locus:2141862	853	AT4G18250 [Arabidopsis thalian	0.831	0.144	0.476	4.3e-25
TAIR|locus:2059103	828	AT2G19130 [Arabidopsis thalian	0.831	0.148	0.5	2.9e-24
TAIR|locus:2177152	806	AT5G39030 [Arabidopsis thalian	0.912	0.167	0.435	3.6e-24
TAIR|locus:2020583	799	AT1G70250 [Arabidopsis thalian	0.831	0.153	0.441	1.2e-23
TAIR|locus:2176717	638	AT5G38260 [Arabidopsis thalian	0.837	0.194	0.449	1.6e-23
TAIR|locus:2034344	381	ASG5 "ALTERED SEED GERMINATION	0.729	0.283	0.467	1e-22
TAIR|locus:2014604	381	AT1G76370 [Arabidopsis thalian	0.729	0.283	0.486	1e-22
TAIR|locus:2019688	674	AT1G66930 [Arabidopsis thalian	0.837	0.183	0.438	1.3e-22

TAIR|locus:2204480 AT1G66910 [Arabidopsis thaliana (taxid:3702)]

 Score = 301 (111.0 bits), Expect = 5.4e-27, Sum P(2) = 5.4e-27
 Identities = 56/110 (50%), Positives = 81/110 (73%)

Query:    39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
             GK GFG+VY+G L+ G  +AVK+L+ S  +  +FINEV+++ +  HVN+V LLGF SEG 
Sbjct:   355 GKGGFGTVYRGTLYDGRSVAVKVLKESQGNGEDFINEVASMSQTSHVNIVTLLGFCSEGY 414

Query:    99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
             KRA++YE+M NGSLD+ I  +  +  +  W +L+ +ALG ARG+EYLH+G
Sbjct:   415 KRAIIYEFMENGSLDKFI--SSKKSSTMDWRELYGIALGVARGLEYLHHG 462

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2176737 PR5K "PR5-like receptor kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 306 (112.8 bits), Expect = 2.1e-26, P = 2.1e-26
 Identities = 63/129 (48%), Positives = 90/129 (69%)

Query:    20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVST 78
             SY  ++K+ +S   +    GK GFG+VYKG+L   G  +AVK+L+ S  +  EFINEV++
Sbjct:   322 SYTRVKKMTNSFAHVL---GKGGFGTVYKGKLADSGRDVAVKILKVSEGNGEEFINEVAS 378

Query:    79 IGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGT 138
             + R  HVN+V LLGF  E +KRA++YE+MPNGSLD++I  N        WE+L++VA+G 
Sbjct:   379 MSRTSHVNIVSLLGFCYEKNKRAIIYEFMPNGSLDKYISAN--MSTKMEWERLYDVAVGI 436

Query:   139 ARGIEYLHN 147
             +RG+EYLHN
Sbjct:   437 SRGLEYLHN 445

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0009691 "cytokinin biosynthetic process" evidence=RCA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0009620 "response to fungus" evidence=ISS

TAIR|locus:2141862 AT4G18250 [Arabidopsis thaliana (taxid:3702)]

 Score = 296 (109.3 bits), Expect = 4.3e-25, P = 4.3e-25
 Identities = 62/130 (47%), Positives = 89/130 (68%)

Query:    20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLH--TGGLIAVKMLENSNFSAVEFINEVS 77
             S+E ++K+ +S  D     GK GFG+VYKG+L   +G  IA+K+L+ S  +  EFINE+ 
Sbjct:   510 SFEKVKKMTNS-FDHV--IGKGGFGTVYKGKLPDASGRDIALKILKESKGNGEEFINELV 566

Query:    78 TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
             ++ R  HVN+V L GF  EGS+RA++YE+MPNGSLD+ I  +E       W+ L+ +A+G
Sbjct:   567 SMSRASHVNIVSLFGFCYEGSQRAIIYEFMPNGSLDKFI--SENMSTKIEWKTLYNIAVG 624

Query:   138 TARGIEYLHN 147
              ARG+EYLHN
Sbjct:   625 VARGLEYLHN 634

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)]

 Score = 288 (106.4 bits), Expect = 2.9e-24, P = 2.9e-24
 Identities = 62/124 (50%), Positives = 81/124 (65%)

Query:    25 RKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHH 84
             R+L ++  + +   G  GFGSV+KG L     IAVK LE  +    +F  EV TIG I H
Sbjct:   486 RELQNATKNFSDKLGGGGFGSVFKGALPDSSDIAVKRLEGISQGEKQFRTEVVTIGTIQH 545

Query:    85 VNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS-FSWEKLHEVALGTARGIE 143
             VN+V+L GF SEGSK+ LVY+YMPNGSLD H+F N+   K    W+   ++ALGTARG+ 
Sbjct:   546 VNLVRLRGFCSEGSKKLLVYDYMPNGSLDSHLFLNQVEEKIVLGWKLRFQIALGTARGLA 605

Query:   144 YLHN 147
             YLH+
Sbjct:   606 YLHD 609

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2177152 AT5G39030 [Arabidopsis thaliana (taxid:3702)]

 Score = 287 (106.1 bits), Expect = 3.6e-24, P = 3.6e-24
 Identities = 61/140 (43%), Positives = 94/140 (67%)

Query:     9 LVVLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS 68
             +V+  + ++  +Y +L+K+  S    ++  GK GFG+VY G L  G  +AVK+L++   S
Sbjct:   478 VVMFKKLLNMYTYAELKKITKS---FSYIIGKGGFGTVYGGNLSNGRKVAVKVLKDLKGS 534

Query:    69 AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSW 128
             A +FINEV+++ +  HVN+V LLGF  EGSKRA+VYE++ NGSLD+ +  N+   +  + 
Sbjct:   535 AEDFINEVASMSQTSHVNIVSLLGFCFEGSKRAIVYEFLENGSLDQFMSRNKSLTQDVT- 593

Query:   129 EKLHEVALGTARGIEYLHNG 148
               L+ +ALG ARG+EYLH G
Sbjct:   594 -TLYGIALGIARGLEYLHYG 612

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2020583 AT1G70250 [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 1.2e-23, P = 1.2e-23
 Identities = 57/129 (44%), Positives = 84/129 (65%)

Query:    20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVST 78
             SY  ++K+  S  ++    GK GFG+VYKG+L  G   +AVK+L+ SN    +FINE+++
Sbjct:   450 SYVQVKKMTKSFENVL---GKGGFGTVYKGKLPDGSRDVAVKILKESNEDGEDFINEIAS 506

Query:    79 IGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGT 138
             + R  H N+V LLGF  EG K+A++YE MPNGSLD+ I  N        W+ L+ +A+G 
Sbjct:   507 MSRTSHANIVSLLGFCYEGRKKAIIYELMPNGSLDKFISKN--MSAKMEWKTLYNIAVGV 564

Query:   139 ARGIEYLHN 147
             + G+EYLH+
Sbjct:   565 SHGLEYLHS 573

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2176717 AT5G38260 [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 1.6e-23, P = 1.6e-23
 Identities = 58/129 (44%), Positives = 87/129 (67%)

Query:    20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTI 79
             SY ++RK+       + + GK GFG+VY G L  G  +AVK+L++   +  +FINEV+++
Sbjct:   312 SYAEVRKITKL---FSHTLGKGGFGTVYGGNLCDGRKVAVKILKDFKSNGEDFINEVASM 368

Query:    80 GRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA 139
              +  HVN+V LLGF  EGSKRA+VYE++ NGSLD+  F +E +  +     L+ +ALG A
Sbjct:   369 SQTSHVNIVSLLGFCYEGSKRAIVYEFLENGSLDQ--FLSEKKSLNLDVSTLYRIALGVA 426

Query:   140 RGIEYLHNG 148
             RG++YLH+G
Sbjct:   427 RGLDYLHHG 435

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2034344 ASG5 "ALTERED SEED GERMINATION 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 51/109 (46%), Positives = 70/109 (64%)

Query:    39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAV-EFINEVSTIGRIHHVNVVQLLGFYSEG 97
             G+ GFG VYKG+L +G ++A+K L         EFI EV  +  +HH N+V L+G+ + G
Sbjct:    85 GEGGFGRVYKGRLDSGQVVAIKQLNPDGLQGNREFIVEVLMLSLLHHPNLVTLIGYCTSG 144

Query:    98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              +R LVYEYMP GSL+ H+F  E   +  SW    ++A+G ARGIEYLH
Sbjct:   145 DQRLLVYEYMPMGSLEDHLFDLESNQEPLSWNTRMKIAVGAARGIEYLH 193

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2014604 AT1G76370 [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 53/109 (48%), Positives = 70/109 (64%)

Query:    39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSA-VEFINEVSTIGRIHHVNVVQLLGFYSEG 97
             GK GFGSVYKG+L +G ++A+K L         EFI EV  +   HH N+V L+G+ + G
Sbjct:    82 GKGGFGSVYKGRLDSGQVVAIKQLNPDGHQGNQEFIVEVCMLSVFHHPNLVTLIGYCTSG 141

Query:    98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
             ++R LVYEYMP GSL+ H+F  E      SW    ++A+G ARGIEYLH
Sbjct:   142 AQRLLVYEYMPMGSLEDHLFDLEPDQTPLSWYTRMKIAVGAARGIEYLH 190

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2019688 AT1G66930 [Arabidopsis thaliana (taxid:3702)]

 Score = 271 (100.5 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 57/130 (43%), Positives = 87/130 (66%)

Query:    20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKML-ENSNFSAVEFINEVST 78
             +Y  ++++  S  ++    G+ GFG VY+G L  G ++AVK+L E+   ++ +FINEVS+
Sbjct:   337 TYAQVKRMTKSFAEVV---GRGGFGIVYRGTLCDGRMVAVKVLKESKGNNSEDFINEVSS 393

Query:    79 IGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGT 138
             + +  HVN+V LLGF SEGS+RA++YE++ NGSLD+ I  +E          L+ +ALG 
Sbjct:   394 MSQTSHVNIVSLLGFCSEGSRRAIIYEFLENGSLDKFI--SEKTSVILDLTALYGIALGV 451

Query:   139 ARGIEYLHNG 148
             ARG+EYLH G
Sbjct:   452 ARGLEYLHYG 461

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	148
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-21
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-21
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	5e-21
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	6e-20
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-19
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-19
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-17
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	6e-16
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	5e-12
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	6e-12
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	8e-12
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	9e-12
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	3e-11
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	4e-11
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	7e-11
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	2e-10
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-10
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-10
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	5e-10
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	8e-10
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	1e-09
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-09
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-09
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	5e-09
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	7e-09
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	8e-09
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	1e-08
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-08
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-08
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	2e-08
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	2e-08
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	3e-08
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	3e-08
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	3e-08
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	4e-08
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	4e-08
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	6e-08
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	7e-08
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	7e-08
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	9e-08
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-07
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-07
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	1e-07
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-07
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-07
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	3e-07
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-07
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	4e-07
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	5e-07
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	6e-07
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	7e-07
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	7e-07
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	8e-07
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-06
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-06
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-06
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-06
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	4e-06
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	9e-06
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	9e-06
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-05
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-05
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-05
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	1e-05
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	2e-05
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-05
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	2e-05
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-05
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	2e-05
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-05
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	3e-05
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	3e-05
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	3e-05
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	3e-05
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	4e-05
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	4e-05
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	5e-05
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	5e-05
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	6e-05
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	6e-05
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	7e-05
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	7e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-04
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-04
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	1e-04
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	2e-04
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	3e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-04
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	3e-04
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	4e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	4e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	5e-04
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-04
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	5e-04
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	5e-04
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	5e-04
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	5e-04
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	6e-04
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	6e-04
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	6e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	7e-04
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	0.002
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	0.002
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	0.002
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	0.002
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	0.002
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	0.003
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	0.003
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	0.003
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	0.003
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	0.003
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	0.003
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	0.004
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	0.004
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	0.004

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 86.8 bits (216), Expect = 1e-21
 Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 10/112 (8%)

Query: 43  FGSVYKGQLH-----TGGLIAVKMLENSNFSA--VEFINEVSTIGRIHHVNVVQLLGFYS 95
           FG VYKG L      T   +AVK L+         EF+ E S + ++ H N+V+LLG  +
Sbjct: 12  FGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCT 71

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           +G    +V EYMP G L   +      G+  + + L ++AL  A+G+EYL +
Sbjct: 72  QGEPLYIVTEYMPGGDLLDFL---RKHGEKLTLKDLLQMALQIAKGMEYLES 120

Length = 258

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 86.1 bits (214), Expect = 2e-21
 Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 9/111 (8%)

Query: 43  FGSVYKGQL-----HTGGLIAVKML-ENSNFSAV-EFINEVSTIGRIHHVNVVQLLGFYS 95
           FG VYKG L          +AVK L E+++   + EF+ E   + ++ H N+V+LLG  +
Sbjct: 12  FGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCT 71

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
           E     +V EYMP G L  ++  N  R K  S   L   AL  ARG+EYL 
Sbjct: 72  EEEPLMIVMEYMPGGDLLDYLRKN--RPKELSLSDLLSFALQIARGMEYLE 120

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 85.3 bits (212), Expect = 5e-21
 Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 10/111 (9%)

Query: 43  FGSVYKGQL-----HTGGLIAVKML-ENSNFSAV-EFINEVSTIGRIHHVNVVQLLGFYS 95
           FG VYKG+L          +AVK L E+++   + EF+ E   + ++ H NVV+LLG  +
Sbjct: 12  FGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCT 71

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
           E     +V EYM  G L  ++          S   L   AL  ARG+EYL 
Sbjct: 72  EEEPLYIVMEYMEGGDLLSYL---RKNRPKLSLSDLLSFALQIARGMEYLE 119

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 82.3 bits (204), Expect = 6e-20
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 19/131 (14%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFI---NEV 76
           YE LRKL           G   FG+VYK +   TG ++AVK+L+  +  + +      E+
Sbjct: 1   YELLRKL-----------GSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREI 49

Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVAL 136
             + R+ H N+V+L+  + +     LV EY   G L  ++     RG   S ++  ++AL
Sbjct: 50  RILRRLSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLS----RGGPLSEDEAKKIAL 105

Query: 137 GTARGIEYLHN 147
              RG+EYLH+
Sbjct: 106 QILRGLEYLHS 116

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 80.0 bits (198), Expect = 2e-19
 Identities = 36/112 (32%), Positives = 64/112 (57%), Gaps = 6/112 (5%)

Query: 39  GKDGFGSVYKGQLH-TGGLIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
           G+ GFG+VY  +   TG  +A+K++  E+S+    E + E+  + +++H N+V+L G + 
Sbjct: 2   GEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFE 61

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           + +   LV EY   GSL   +  NEG+    S +++  + L    G+EYLH+
Sbjct: 62  DENHLYLVMEYCEGGSLKDLLKENEGK---LSEDEILRILLQILEGLEYLHS 110

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 80.3 bits (199), Expect = 4e-19
 Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 11/116 (9%)

Query: 43  FGSVYKGQLHTGG----LIAVKML-ENSNFSAV-EFINEVSTIGRIHHVNVVQLLGFYSE 96
           FG VYKG+L         +AVK L E+++     +F+ E   + ++ H NVV+LLG  +E
Sbjct: 8   FGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE 67

Query: 97  GSKRALVYEYMPNGSLDRHI-----FPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                LV EYM  G L  ++             + S + L   A+  A+G+EYL +
Sbjct: 68  EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS 123

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 75.3 bits (186), Expect = 3e-17
 Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 18/130 (13%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE--FINEVS 77
           YE L KL           G+  FG VY  +   TG L+A+K+++           + E+ 
Sbjct: 1   YEILEKL-----------GEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIK 49

Query: 78  TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
            + ++ H N+V+L   + +  K  LV EY   G L   +     +    S ++       
Sbjct: 50  ILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLL----KKRGRLSEDEARFYLRQ 105

Query: 138 TARGIEYLHN 147
               +EYLH+
Sbjct: 106 ILSALEYLHS 115

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 72.0 bits (177), Expect = 6e-16
 Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 9/111 (8%)

Query: 43  FGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           FG V +G+L   G     +A+K L+   S+   ++F+ E S +G+  H N+++L G  ++
Sbjct: 17  FGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK 76

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                ++ EYM NGSLD+ +  N+G+   F+  +L  +  G A G++YL  
Sbjct: 77  SRPVMIITEYMENGSLDKFLRENDGK---FTVGQLVGMLRGIASGMKYLSE 124

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 61.1 bits (149), Expect = 5e-12
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFY 94
           G+  FG VYKG  L TG  +A+K +             + E+  +  + H N+V+ +G  
Sbjct: 9   GRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSI 68

Query: 95  SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                  ++ EY  NGSL + I       +S     +++V     +G+ YLH 
Sbjct: 69  ETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQV----LQGLAYLHE 117

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 60.6 bits (148), Expect = 6e-12
 Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 20/120 (16%)

Query: 39  GKDGFGSVYKGQLH-TGGLIAVK--MLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFY 94
           G+  FGSVY      TG L+AVK   L   +   +E +  E+  +  + H N+V+  G  
Sbjct: 9   GRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSE 68

Query: 95  SEGSKRAL--VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHE--VALGTA---RGIEYLHN 147
            +  K  L    EY+  GSL   +       K F   KL E  +   T     G+ YLH+
Sbjct: 69  RDEEKNTLNIFLEYVSGGSLSSLL-------KKFG--KLPEPVIRKYTRQILEGLAYLHS 119

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 60.3 bits (147), Expect = 8e-12
 Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSE 96
           GK GFG VYK     TG  +A+K+++  +    E I NE+  + +  H N+V+  G Y +
Sbjct: 9   GKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLK 68

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             +  +V E+   GSL   +   +   ++ +  ++  V     +G+EYLH+
Sbjct: 69  KDELWIVMEFCSGGSLKDLL---KSTNQTLTESQIAYVCKELLKGLEYLHS 116

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 60.5 bits (147), Expect = 9e-12
 Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 24/129 (18%)

Query: 39  GKDGFGSVYKGQLHTGG------LIAVKMLENSNFSAV--EFINEVSTIGRIHHVNVVQL 90
           G+  FG VYKG+L           +A+K L+ +    V  EF  E   +  + H N+V L
Sbjct: 14  GEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCL 73

Query: 91  LGFYSEGSKRALVYEYMPNGSLDRHIF-----PNEGRG---------KSFSWEKLHEVAL 136
           LG  ++     +++EY+ +G L  H F     P+   G          S        +A+
Sbjct: 74  LGVCTKEQPTCMLFEYLAHGDL--HEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAI 131

Query: 137 GTARGIEYL 145
             A G+EYL
Sbjct: 132 QIAAGMEYL 140

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 59.0 bits (143), Expect = 3e-11
 Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 5/115 (4%)

Query: 32  LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
           L L  + GK  FG V  G  + G  +AVK L++ + +A  F+ E S +  + H N+VQLL
Sbjct: 8   LKLGATIGKGEFGDVMLG-DYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLL 66

Query: 92  GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS-FSWEKLHEVALGTARGIEYL 145
           G   +G+   +V EYM  GSL  ++     RG++  +  +    AL    G+EYL
Sbjct: 67  GVVLQGNPLYIVTEYMAKGSLVDYL---RSRGRAVITLAQQLGFALDVCEGMEYL 118

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 58.8 bits (142), Expect = 4e-11
 Identities = 34/115 (29%), Positives = 63/115 (54%), Gaps = 9/115 (7%)

Query: 39  GKDGFGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V++G L   G     +A+K L+   +     +F++E S +G+  H N+++L G
Sbjct: 14  GAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEG 73

Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             ++     ++ EYM NG+LD+++  ++G    FS  +L  +  G A G++YL +
Sbjct: 74  VVTKFKPAMIITEYMENGALDKYLRDHDG---EFSSYQLVGMLRGIAAGMKYLSD 125

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 57.8 bits (140), Expect = 7e-11
 Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 20/131 (15%)

Query: 34  LTWSSGKDGFGSVYKGQLHTGG------LIAVKMLEN--SNFSAVEFINEVSTIGRIHHV 85
           L    G+  FG V+ G+ +         L+AVK L+   SN +  +F  E   +    H 
Sbjct: 9   LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68

Query: 86  NVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSW-----------EKLHEV 134
           N+V+  G  +EG    +V+EYM +G L++ +  + G   +F              +L ++
Sbjct: 69  NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSH-GPDAAFLKSPDSPMGELTLSQLLQI 127

Query: 135 ALGTARGIEYL 145
           A+  A G+ YL
Sbjct: 128 AVQIASGMVYL 138

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 56.7 bits (137), Expect = 2e-10
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 15/124 (12%)

Query: 39  GKDGFGSVYKGQLH----TGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLL 91
           G+  FGSV +GQL     +   +AVK ++    +  E   F++E + +    H NV++L+
Sbjct: 8   GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLI 67

Query: 92  GFYSEGSKRA------LVYEYMPNGSLDRHIFPN--EGRGKSFSWEKLHEVALGTARGIE 143
           G   E S         ++  +M +G L   +  +   G  +    + L +  +  A G+E
Sbjct: 68  GVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME 127

Query: 144 YLHN 147
           YL N
Sbjct: 128 YLSN 131

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 56.7 bits (137), Expect = 2e-10
 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 5/109 (4%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAV--EFINEVSTIGRIHHVNVVQLLGFYSE 96
           GK  FG VYKG L     +AVK   ++    +  +F+ E   + +  H N+V+L+G   +
Sbjct: 4   GKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQ 63

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
                +V E +P GSL   +   + R      +KL +++L  A G+EYL
Sbjct: 64  KQPIYIVMELVPGGSLLTFLRKKKNRLTV---KKLLQMSLDAAAGMEYL 109

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 56.1 bits (135), Expect = 3e-10
 Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 30  SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQ 89
           S L L    G   FG V+ G       +A+K +     S  +FI E   + ++ H  +VQ
Sbjct: 4   SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQ 63

Query: 90  LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           L G  +E S   LV+E+M +G L  ++    G    FS E L  + L    G+ YL
Sbjct: 64  LYGVCTERSPICLVFEFMEHGCLSDYLRAQRG---KFSQETLLGMCLDVCEGMAYL 116

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 55.5 bits (134), Expect = 5e-10
 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 3/107 (2%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G   FG V+ G+      +A+KM+     S  +FI E   + ++ H N+VQL G  ++  
Sbjct: 13  GSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR 72

Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
              +V EYM NG L  ++   +G+  +   E L ++       +EYL
Sbjct: 73  PIFIVTEYMANGCLLNYLRERKGKLGT---EWLLDMCSDVCEAMEYL 116

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 55.3 bits (133), Expect = 8e-10
 Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 9/113 (7%)

Query: 39  GKDGFGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V +G+L   G     +A+K L++  +     +F++E S +G+  H N++ L G
Sbjct: 13  GAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEG 72

Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
             ++     ++ E+M NG+LD  +  N+G+   F+  +L  +  G A G++YL
Sbjct: 73  VVTKSRPVMIITEFMENGALDSFLRQNDGQ---FTVIQLVGMLRGIAAGMKYL 122

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 54.5 bits (131), Expect = 1e-09
 Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 9/126 (7%)

Query: 26  KLLDSGLDLTWSSGKDGFGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTI 79
           +L +  + +    G   FG + +G L         +A+  L    S+     F+ E  T+
Sbjct: 1   ELDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTL 60

Query: 80  GRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA 139
           G+  H N+V+L G  + G+   +V EYM NG+LD  +  +EG+       +L  +  G A
Sbjct: 61  GQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQ---LVAGQLMGMLPGLA 117

Query: 140 RGIEYL 145
            G++YL
Sbjct: 118 SGMKYL 123

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 54.6 bits (131), Expect = 1e-09
 Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 7/116 (6%)

Query: 32  LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
           L L  + GK  FG V  G  + G  +AVK ++N + +A  F+ E S + ++ H N+VQLL
Sbjct: 8   LKLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLL 65

Query: 92  G-FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS-FSWEKLHEVALGTARGIEYL 145
           G    E     +V EYM  GSL  ++     RG+S    + L + +L     +EYL
Sbjct: 66  GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL 118

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 54.3 bits (131), Expect = 2e-09
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 14/122 (11%)

Query: 39  GKDGFGSVYKGQLHT------GGLIAVKML-ENSNFSA-VEFINEVSTIGRIHHVNVVQL 90
           G+  FG VY+G             +A+K + EN++    +EF+NE S +   +  +VV+L
Sbjct: 15  GQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRL 74

Query: 91  LGFYSEGSKRALVYEYMPNGSLD---RHIFPNE---GRGKSFSWEKLHEVALGTARGIEY 144
           LG  S G    +V E M  G L    R   P           + +K  ++A   A G+ Y
Sbjct: 75  LGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAY 134

Query: 145 LH 146
           L 
Sbjct: 135 LA 136

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 52.8 bits (127), Expect = 5e-09
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 18/121 (14%)

Query: 39  GKDGFGSVYKGQL-----HTGGLIAVKMLENS--NFSAVEFINEVSTIGRIHHVNVVQLL 91
           G+  FG V   +      +TG  +AVK L +S       +F  E+  +  + H N+V+  
Sbjct: 13  GEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYK 72

Query: 92  GFYSEGSKRA--LVYEYMPNGSLD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
           G   +   R+  L+ EY+P+GSL    +         +   +      +    +G++YL 
Sbjct: 73  GVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLF------SSQICKGMDYLG 126

Query: 147 N 147
           +
Sbjct: 127 S 127

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 52.2 bits (126), Expect = 7e-09
 Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 33/153 (21%)

Query: 7   KVLVVLNRSVD--NPS--YEDLRKLLDSGLDLTWSSGKDGFGSVYKG-QLHTGGLIAVKM 61
           ++   L   V   +P   Y++L K+           G+   G VYK     TG  +A+K 
Sbjct: 3   ELKAALKDIVSEGDPRELYKNLEKI-----------GEGASGEVYKATDRATGKEVAIKK 51

Query: 62  --LENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL----DRH 115
             L   N   +  INE+  +    H N+V     Y  G +  +V EYM  GSL     ++
Sbjct: 52  MRLRKQNKELI--INEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQN 109

Query: 116 IFP-NEGRGKSFSWEKLHEVALGTARGIEYLHN 147
               NE +        +  V     +G+EYLH+
Sbjct: 110 FVRMNEPQ--------IAYVCREVLQGLEYLHS 134

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 52.4 bits (124), Expect = 8e-09
 Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)

Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKML----ENSNFSAVEFINE 75
           SY  LRKL           G+  FG VY  +     L+A+K+L    E+ +     F+ E
Sbjct: 1   SYRILRKL-----------GEGSFGEVYLARDRK--LVALKVLAKKLESKSKEVERFLRE 47

Query: 76  VSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
           +  +  + H  N+V+L  F+ +     LV EY+  GSL   +    GR    S  +   +
Sbjct: 48  IQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSL-EDLLKKIGRKGPLSESEALFI 106

Query: 135 ALGTARGIEYLH 146
                  +EYLH
Sbjct: 107 LAQILSALEYLH 118

Length = 384

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 51.7 bits (124), Expect = 1e-08
 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 3/108 (2%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSN-FSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
           G   FG V++G       +A+K+L++ +     +F  EV  + R+ H +++ L    S G
Sbjct: 15  GSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVG 74

Query: 98  SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
               ++ E M  GSL    F     G+      L ++A   A G+ YL
Sbjct: 75  EPVYIITELMEKGSL--LAFLRSPEGQVLPVASLIDMACQVAEGMAYL 120

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 2/103 (1%)

Query: 43  FGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL 102
           FG V+ G  +    +AVK L+    S   F+ E   + ++ H  +VQL    SE     +
Sbjct: 19  FGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYI 78

Query: 103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           V EYM  GSL    F   G GK     +L ++A   A G+ YL
Sbjct: 79  VTEYMSKGSLLD--FLKSGEGKKLRLPQLVDMAAQIAEGMAYL 119

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 17/117 (14%)

Query: 39  GKDGFGSVYKGQLHTGG-----LIAVKMLENSN--FSAVEFINEVSTIGRIHHVNVVQLL 91
           G   FG+VYKG     G      +A+K+L       +  E ++E   +  + H +VV+LL
Sbjct: 16  GSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLL 75

Query: 92  GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS---FSWEKLHEVALGTARGIEYL 145
           G     S+  L+ + MP G L  ++  ++    S    +W       +  A+G+ YL
Sbjct: 76  GI-CLSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNW------CVQIAKGMSYL 125

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 51.1 bits (122), Expect = 2e-08
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 9/113 (7%)

Query: 39  GKDGFGSVYKGQLHTGG----LIAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V  G+L   G     +A+K L+   +     +F++E S +G+  H N++ L G
Sbjct: 13  GAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEG 72

Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
             ++     +V EYM NGSLD  +  ++G+   F+  +L  +  G A G++YL
Sbjct: 73  VVTKSKPVMIVTEYMENGSLDAFLRKHDGQ---FTVIQLVGMLRGIASGMKYL 122

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 51.2 bits (122), Expect = 2e-08
 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 20/127 (15%)

Query: 39  GKDGFGSVYKGQLHTGG-----LIAVKMLENSNFSA--VEFINEVSTIGRIHHVNVVQLL 91
           G+  FG +YKG L+  G     L+A+K L++ N      EF  E S +  +HH N+V LL
Sbjct: 14  GECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLL 73

Query: 92  GFYSEGSKRALVYEYMPNGSLDRHIF---PNEGRG----------KSFSWEKLHEVALGT 138
           G  ++     +++EY+  G L   +    P+   G           S        +A+  
Sbjct: 74  GVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQI 133

Query: 139 ARGIEYL 145
           A G+EYL
Sbjct: 134 AAGMEYL 140

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 50.5 bits (121), Expect = 3e-08
 Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 11/118 (9%)

Query: 39  GKDGFGSVYKGQ-LHTGGL-----IAVKMLENSNFSAVE--FINEVSTIGRIHHVNVVQL 90
           G   FG VY+G      G      +AVK L  S     E  F+ E   + + +H N+V+L
Sbjct: 15  GHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRL 74

Query: 91  LGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           +G   E   R ++ E M  G L    R   P   R  S + + L   A   A+G +YL
Sbjct: 75  IGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL 132

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 50.5 bits (121), Expect = 3e-08
 Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 11/115 (9%)

Query: 39  GKDGFGSVYKG-----QLHTGGLIAVKMLENSNFSAVE-FINEVSTIGRIHHVNVVQLLG 92
           GK  FGSV        Q +TG ++AVK L++S    +  F  E+  +  + H N+V+  G
Sbjct: 13  GKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKG 72

Query: 93  F-YSEGSKR-ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
             YS G +   LV EY+P GSL  ++  +  R       KL   A    +G+EYL
Sbjct: 73  VCYSAGRRNLRLVMEYLPYGSLRDYLQKHRER---LDHRKLLLYASQICKGMEYL 124

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 50.3 bits (120), Expect = 3e-08
 Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 3/107 (2%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G   FG V  G+      +A+KM++  + S  EFI E   + ++ H  +VQL G  ++  
Sbjct: 13  GTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR 72

Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
              +V EYM NG L  ++      GK F   +L E+      G+ YL
Sbjct: 73  PIYIVTEYMSNGCLLNYL---REHGKRFQPSQLLEMCKDVCEGMAYL 116

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 50.4 bits (121), Expect = 4e-08
 Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 5/111 (4%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSE 96
           G   +G VYK + + TG L+A+K+++       E I  E+S +    H N+V   G Y  
Sbjct: 12  GSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLR 71

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             K  +V EY   GSL   I+    RG   S  ++  V   T +G+ YLH 
Sbjct: 72  RDKLWIVMEYCGGGSLQ-DIY-QVTRG-PLSELQIAYVCRETLKGLAYLHE 119

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 50.0 bits (119), Expect = 4e-08
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)

Query: 34  LTWSSGKDGFGSVYKGQLHT------GGLIAVKMLENSNFSA-VEFINEVSTIGRIHHVN 86
           L W  G+  FG V+  + H         L+AVK L+ ++ SA  +F  E   +  + H +
Sbjct: 9   LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQH 68

Query: 87  VVQLLGFYSEGSKRALVYEYMPNGSLDR 114
           +V+  G  +EG    +V+EYM +G L+R
Sbjct: 69  IVRFYGVCTEGRPLLMVFEYMRHGDLNR 96

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 49.6 bits (118), Expect = 6e-08
 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 3/114 (2%)

Query: 32  LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
           L L    G   FG V+ G  +    +AVK L+    S   F+ E   + ++ H  +VQL 
Sbjct: 8   LQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLY 67

Query: 92  GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
              SE     +V EYM  GSL    F  +G G++     L ++A   A G+ Y+
Sbjct: 68  AVVSE-EPIYIVTEYMSKGSL--LDFLKDGEGRALKLPNLVDMAAQVAAGMAYI 118

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 49.6 bits (119), Expect = 7e-08
 Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 5/110 (4%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
           G+  +GSVYK     TG ++A+K++        E I E+S + +     +V+  G Y + 
Sbjct: 12  GEGSYGSVYKAIHKETGQVVAIKVVPVEE-DLQEIIKEISILKQCDSPYIVKYYGSYFKN 70

Query: 98  SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           +   +V EY   GS+   +   +   K+ + E++  +   T +G+EYLH+
Sbjct: 71  TDLWIVMEYCGAGSVSDIM---KITNKTLTEEEIAAILYQTLKGLEYLHS 117

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 49.6 bits (118), Expect = 7e-08
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 6/98 (6%)

Query: 21  YEDLRKLLDSG--LDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE-FINEV 76
           YE +R+ LD     ++    G   FG VYK +   TG L A K++E  +   +E ++ E+
Sbjct: 1   YEHVRRDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEI 60

Query: 77  STIGRIHHVNVVQLLG-FYSEGSKRALVYEYMPNGSLD 113
             +   +H  +V+LLG FY +G K  ++ E+ P G++D
Sbjct: 61  EILATCNHPYIVKLLGAFYWDG-KLWIMIEFCPGGAVD 97

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 49.4 bits (118), Expect = 9e-08
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 16/121 (13%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSA----------VEFIN-EVSTIGRIHHVN 86
           GK  +G VY    + TG ++AVK +E     A          V+ +  E+ T+  + H+N
Sbjct: 10  GKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLN 69

Query: 87  VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
           +VQ LGF +     ++  EY+P GS+        GR   F  + +         G+ YLH
Sbjct: 70  IVQYLGFETTEEYLSIFLEYVPGGSIGS-CLRTYGR---FEEQLVRFFTEQVLEGLAYLH 125

Query: 147 N 147
           +
Sbjct: 126 S 126

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 48.7 bits (117), Expect = 1e-07
 Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 27/120 (22%)

Query: 43  FGSVYKG-QLHTGGLIAVKMLENS---------NFSAVEFINEVSTIGRIHHVNVVQLLG 92
           +  VYK     TG ++A+K ++           NF+A   + E+  +  + H N++ LL 
Sbjct: 13  YAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTA---LREIKLLQELKHPNIIGLLD 69

Query: 93  FYSEGSKRALVYEYMPNGSL-----DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            +   S   LV+E+M    L     D+ I       KS+    L        RG+EYLH+
Sbjct: 70  VFGHKSNINLVFEFME-TDLEKVIKDKSIVLTPADIKSYMLMTL--------RGLEYLHS 120

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 48.7 bits (116), Expect = 1e-07
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 19  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 78

Query: 102 LVYEYMPNGSL 112
           ++ E+M  G+L
Sbjct: 79  IITEFMTYGNL 89

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 13/130 (10%)

Query: 16  VDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINE 75
           +D  S + LRKL           G   FG V++G  +    +AVK L+       +F+ E
Sbjct: 3   IDRTSIQLLRKL-----------GAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAE 51

Query: 76  VSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVA 135
              + ++ H  ++QL    +      +V E M  GSL  ++    GR  +    +L ++A
Sbjct: 52  AQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGR--ALKLPQLIDMA 109

Query: 136 LGTARGIEYL 145
              A G+ YL
Sbjct: 110 AQVASGMAYL 119

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 20/118 (16%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKM--LENSNFSAVEFIN-EVSTIGRIHHVNVVQLLGFY 94
           GK  FG VYK     T  ++A+K+  LE +    +E I  E+  + +     + +  G +
Sbjct: 10  GKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE-DEIEDIQQEIQFLSQCRSPYITKYYGSF 68

Query: 95  SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA-----RGIEYLHN 147
            +GSK  ++ EY   GS    + P           KL E  +         G+EYLH 
Sbjct: 69  LKGSKLWIIMEYCGGGSCLDLLKPG----------KLDETYIAFILREVLLGLEYLHE 116

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 48.0 bits (114), Expect = 2e-07
 Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 11/116 (9%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKM--LENSNFSAVE-----FINEVSTIGRIHHVNVVQLL 91
           GK  +G+VY G  + G LIAVK   L+ SN  A E        EV  +  + HVN+VQ L
Sbjct: 9   GKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYL 68

Query: 92  GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           G   + +  ++  E++P GS+   +     R          +       G+ YLHN
Sbjct: 69  GTCLDDNTISIFMEFVPGGSISSIL----NRFGPLPEPVFCKYTKQILDGVAYLHN 120

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 47.7 bits (113), Expect = 3e-07
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 10/100 (10%)

Query: 56  LIAVKMLENSNFSAV--EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD 113
           L+AVKML          +F+ E+  + R+ + N+++LLG         ++ EYM NG L+
Sbjct: 46  LVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLN 105

Query: 114 RHIFPNEGRGK--------SFSWEKLHEVALGTARGIEYL 145
           + +   E            S S   L  +A+  A G++YL
Sbjct: 106 QFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYL 145

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 15/116 (12%)

Query: 39  GKDGFGSVYKGQLH--TGGLIAVK---MLENSNF-SAVEFINEVSTIGRIHHVNVVQLLG 92
           G+   G VYK + H  TG + A+K   +  +  F   +    E+ T+       VV+  G
Sbjct: 10  GQGSSGVVYKVR-HKPTGKIYALKKIHVDGDEEFRKQLL--RELKTLRSCESPYVVKCYG 66

Query: 93  -FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            FY EG    +V EYM  GSL   +     +        L  +A    +G++YLH 
Sbjct: 67  AFYKEGEIS-IVLEYMDGGSLADLL----KKVGKIPEPVLAYIARQILKGLDYLHT 117

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 47.6 bits (113), Expect = 4e-07
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 9/99 (9%)

Query: 56  LIAVKML-ENSNFSAV-EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD 113
           L+AVKML E++N +A  +F+ E+  + R+   N+++LL          ++ EYM NG L+
Sbjct: 48  LVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLN 107

Query: 114 ----RHIFPNEGR---GKSFSWEKLHEVALGTARGIEYL 145
               RH            + S+  L  +A   A G++YL
Sbjct: 108 QFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYL 146

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 47.3 bits (113), Expect = 5e-07
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 11/100 (11%)

Query: 56  LIAVKML---ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
           L+AVK+L    + N +  +F+ EV  + R+   N+ +LLG  +      ++ EYM NG L
Sbjct: 48  LVAVKVLRPDASDN-AREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDL 106

Query: 113 D----RHIFPNEGR---GKSFSWEKLHEVALGTARGIEYL 145
           +    +H+    G     KS S+  L  +A   A G+ YL
Sbjct: 107 NQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYL 146

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 46.8 bits (112), Expect = 6e-07
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 17/117 (14%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFIN--EVSTIGRI-HHVNVVQLLGFY 94
           G   FGSVY  +   TG L+A+K ++   +S  E +N  EV ++ ++  H N+V+L   +
Sbjct: 8   GDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVF 67

Query: 95  SEGSKRALVYEYMPNGSL-----DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
            E  +   V+EYM  G+L     DR       +GK FS   +  +     +G+ ++H
Sbjct: 68  RENDELYFVFEYM-EGNLYQLMKDR-------KGKPFSESVIRSIIYQILQGLAHIH 116

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 46.7 bits (111), Expect = 7e-07
 Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 13/123 (10%)

Query: 39  GKDGFGSVY----KGQLHTGG--LIAVKMLENS--NFSAVEFINEVSTIGRIHHVNVVQL 90
           G+  FG V+    KG    GG  L+ VK L+ +       EF  E+    ++ H NVV+L
Sbjct: 14  GRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRL 73

Query: 91  LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKL---HEVALGT--ARGIEYL 145
           LG   E     ++ EY   G L + +   + + +      L    +VAL T  A G+++L
Sbjct: 74  LGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHL 133

Query: 146 HNG 148
            N 
Sbjct: 134 SNA 136

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 46.6 bits (111), Expect = 7e-07
 Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 21/127 (16%)

Query: 35  TWSSGK----DGFGSVYKG-QLHTGGLIAVK--MLENSNFSAVEFIN----EVSTIGRIH 83
            W  G+      FGSVY+G  L  G   AVK   L +   +  E +     E++ + ++ 
Sbjct: 1   RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ 60

Query: 84  HVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTAR--- 140
           H N+VQ LG   E     +  E +P GSL + +     +  SF       + L T +   
Sbjct: 61  HPNIVQYLGTEREEDNLYIFLELVPGGSLAKLL----KKYGSFPEP---VIRLYTRQILL 113

Query: 141 GIEYLHN 147
           G+EYLH+
Sbjct: 114 GLEYLHD 120

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 46.3 bits (110), Expect = 8e-07
 Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 30/137 (21%)

Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKM--LENSNFSAVEFINEV 76
           +++ L KL           G+  + +VYKG+   TG ++A+K   L+    +    I E+
Sbjct: 1   NFKQLEKL-----------GEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREI 49

Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRG-------KSFSWE 129
           S +  + H N+V+L       +K  LV+EYM +  L +++  +  RG       KSF+++
Sbjct: 50  SLMKELKHENIVRLHDVIHTENKLMLVFEYM-DKDLKKYMDTHGVRGALDPNTVKSFTYQ 108

Query: 130 KLHEVALGTARGIEYLH 146
            L        +GI + H
Sbjct: 109 LL--------KGIAFCH 117

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 46.0 bits (109), Expect = 1e-06
 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 13/128 (10%)

Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
           NPS     K L SG           FG V+ G+      +A+K +     S  +FI E  
Sbjct: 2   NPSELTFMKELGSGQ----------FGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAK 51

Query: 78  TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
            + ++ H  +VQL G  ++     +V E+M NG L  ++   +G+    S + L  +   
Sbjct: 52  VMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGK---LSKDMLLSMCQD 108

Query: 138 TARGIEYL 145
              G+EYL
Sbjct: 109 VCEGMEYL 116

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 45.6 bits (109), Expect = 2e-06
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 29/135 (21%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKM--LENSN--FSAVEFINE 75
           YE L KL           G+  +G VYK +   TG ++A+K   L+N          + E
Sbjct: 1   YEKLEKL-----------GEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIP-STALRE 48

Query: 76  VSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN---GSLDRHIFP-NEGRGKSFSWEKL 131
           +S +  + H N+V+LL       K  LV+EY        LD+   P +    KS  ++ L
Sbjct: 49  ISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLL 108

Query: 132 HEVALGTARGIEYLH 146
                   RG+ Y H
Sbjct: 109 --------RGLAYCH 115

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 9/95 (9%)

Query: 57  IAVKM--LENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGS-LD 113
           +A+K   LE    S  E   EV  + + +H NVV+    +  G +  LV  Y+  GS LD
Sbjct: 29  VAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLD 88

Query: 114 --RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
             +  +P  G  ++     L EV     +G+EYLH
Sbjct: 89  IMKSSYPRGGLDEAIIATVLKEV----LKGLEYLH 119

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 44.8 bits (107), Expect = 3e-06
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 15/130 (11%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVK--MLENSNFSAVEF-INEV 76
           YE ++++           GK  FG VY  +    G L  +K   L N +    E  +NEV
Sbjct: 2   YEIIKQI-----------GKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEV 50

Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVAL 136
             + +++H N+++    + E  K  +V EY   G L + I   +  GK F  E++ +  +
Sbjct: 51  KILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFV 110

Query: 137 GTARGIEYLH 146
                ++YLH
Sbjct: 111 QLCLALKYLH 120

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 44.6 bits (105), Expect = 4e-06
 Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 8/121 (6%)

Query: 27  LLD-SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHV 85
           LL+   L L    G+  FG+V +G+ +TG  +AVK ++  + +A  F+ E + + ++HH 
Sbjct: 2   LLNLQKLTLGEIIGEGEFGAVLQGE-YTGQKVAVKNIK-CDVTAQAFLEETAVMTKLHHK 59

Query: 86  NVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSF-SWEKLHEVALGTARGIEY 144
           N+V+LLG         +V E M  G+L   +     RG++  S  +L + +L  A G+EY
Sbjct: 60  NLVRLLGVILHNGLY-IVMELMSKGNLVNFL---RTRGRALVSVIQLLQFSLDVAEGMEY 115

Query: 145 L 145
           L
Sbjct: 116 L 116

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 43.6 bits (103), Expect = 9e-06
 Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFY 94
           GK  +GSVYK + L      A+K ++  + S  E    +NE+  +  ++H N++     +
Sbjct: 9   GKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAF 68

Query: 95  SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
            +G+K  +V EY P G L + I   + + K    +++  + +   RG++ LH
Sbjct: 69  LDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 43.4 bits (102), Expect = 9e-06
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 17/107 (15%)

Query: 56  LIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD 113
           L+AVK+L  + +  +  +F+ EV  + R+   N+++LLG   +     ++ EYM NG L+
Sbjct: 48  LVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLN 107

Query: 114 RHI---------------FPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           + +                P      + S+  L  VAL  A G++YL
Sbjct: 108 QFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYL 154

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 3/107 (2%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G+  FG V+ G  +    +A+K L+        F+ E   + ++ H  +V L    SE  
Sbjct: 15  GQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-E 73

Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
              +V E+M  GSL    F  EG GK     +L ++A   A G+ Y+
Sbjct: 74  PIYIVTEFMGKGSLLD--FLKEGDGKYLKLPQLVDMAAQIADGMAYI 118

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 23/124 (18%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE----------FINEVSTIGRIHHVNV 87
           G   FGSVY G    +G L+AVK +E  + SA               E++ +  + H N+
Sbjct: 9   GSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENI 68

Query: 88  VQLLGFYSEGSKRALVYEYMPNGS----LDRHIFPNEGRGKSFSWEKLHEVALGTARGIE 143
           VQ LG   +     +  EY+P GS    L+ +    E   ++F  + L        +G+ 
Sbjct: 69  VQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQIL--------KGLN 120

Query: 144 YLHN 147
           YLHN
Sbjct: 121 YLHN 124

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 15/93 (16%)

Query: 39  GKDGFGSVYK--------GQLHTGGLIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVV 88
           G+  FG V++         +  T  ++AVKML  E S     +F  E + +    H N+V
Sbjct: 14  GQGAFGRVFQARAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAALMAEFDHPNIV 71

Query: 89  QLLGFYSEGSKRALVYEYMPNGSLD---RHIFP 118
           +LLG  + G    L++EYM  G L+   RH  P
Sbjct: 72  KLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSP 104

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 11/115 (9%)

Query: 39  GKDGFGSVYKGQLHTGGL----IAVKMLENSNFSAV--EFINEVSTIGRIHHVNVVQLLG 92
           G   FG V +G+  T G     +AVK L++   S +  +F+ E + +  + H N+++L G
Sbjct: 4   GDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYG 63

Query: 93  FYSEGSKRALVYEYMPNGSL-DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
                    +V E  P GSL DR      G    F    L + A+  A G+ YL 
Sbjct: 64  VVLT-HPLMMVTELAPLGSLLDRLRKDALG---HFLISTLCDYAVQIANGMRYLE 114

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 43.0 bits (101), Expect = 1e-05
 Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 19/126 (15%)

Query: 39  GKDGFGSVYKGQLH----TGGLIAVKMLENSNFSAV---EFINEVSTIGRIHHVNVVQLL 91
           GK  FGSV + QL     +   +AVKML+   FS+    EF+ E + +    H NV++L+
Sbjct: 8   GKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLI 67

Query: 92  G--FYSEGSKR----ALVYEYMPNGSLDRHIFPNEGR-GK---SFSWEKLHEVALGTARG 141
           G    S    R     ++  +M +G L  H F    R G+   +   + L    +  A G
Sbjct: 68  GVSLRSRAKGRLPIPMVILPFMKHGDL--HTFLLMSRIGEEPFTLPLQTLVRFMIDIASG 125

Query: 142 IEYLHN 147
           +EYL +
Sbjct: 126 MEYLSS 131

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 43.0 bits (101), Expect = 2e-05
 Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 7/98 (7%)

Query: 52  HTGGLIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA--LVYEYM 107
           +TG  +AVK L  E+      +   E+  +  ++H N+V+  G  +E       L+ E++
Sbjct: 31  NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 90

Query: 108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           P+GSL  ++  N+ +    + ++  + A+   +G++YL
Sbjct: 91  PSGSLKEYLPRNKNK---INLKQQLKYAVQICKGMDYL 125

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 11/106 (10%)

Query: 44  GSVYKGQLH-TGGLIAVKMLENSNFSAV--EFINEVSTIGRIHHVNVVQLLGFYSEGSKR 100
           G+VYK     TG L A+K++  ++   V  +   E+  +  ++H NVV+    +    + 
Sbjct: 88  GTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEI 147

Query: 101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
            ++ E+M  GSL+     +E          L +VA     GI YLH
Sbjct: 148 QVLLEFMDGGSLEGTHIADEQ--------FLADVARQILSGIAYLH 185

Length = 353

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 42.3 bits (99), Expect = 2e-05
 Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 3/114 (2%)

Query: 32  LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
           L L    G+  FG V+ G  +    +A+K L+    S   F+ E   + ++ H  +VQL 
Sbjct: 8   LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 67

Query: 92  GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
              SE     +V EYM  GSL    F     GK     +L ++A   A G+ Y+
Sbjct: 68  AVVSE-EPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYV 118

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 42.3 bits (99), Expect = 2e-05
 Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 10/128 (7%)

Query: 24  LRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLE---NSNFSAVEFINEVSTI 79
           LR+      +L    G   +G VYK + LHTG L AVK+++     +FS ++   E+  +
Sbjct: 3   LRRNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQ--QEIFMV 60

Query: 80  GRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA 139
               H N+V   G Y    K  +  EY   GSL + I+   G     S  ++  V   T 
Sbjct: 61  KECKHCNIVAYFGSYLSREKLWICMEYCGGGSL-QDIYHVTG---PLSELQIAYVCRETL 116

Query: 140 RGIEYLHN 147
           +G+ YLH+
Sbjct: 117 QGLAYLHS 124

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 42.2 bits (99), Expect = 2e-05
 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 16/124 (12%)

Query: 36  WSSGK----DGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE-------FINEVSTIGRIH 83
           W  G+      F S Y+ + + TG L+AVK +     ++ E          E+  + R++
Sbjct: 2   WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN 61

Query: 84  HVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIE 143
           H +++++LG   E S   L  E+M  GS+  H+    G   +F    +        RG+ 
Sbjct: 62  HPHIIRMLGATCEDSHFNLFVEWMAGGSVS-HLLSKYG---AFKEAVIINYTEQLLRGLS 117

Query: 144 YLHN 147
           YLH 
Sbjct: 118 YLHE 121

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 42.1 bits (99), Expect = 2e-05
 Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 14/122 (11%)

Query: 39  GKDGFGSVYKGQLHTGG--LIAVK--MLENSNF---------SAVEFINEVSTIG-RIHH 84
           G   FG VYK +    G  L+A+K   + N  F         S  + ++EV+ I  ++ H
Sbjct: 9   GSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRH 68

Query: 85  VNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEY 144
            N+V+    + E  +  +V + +    L  H    + + + F+ E++  + +     + Y
Sbjct: 69  PNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRY 128

Query: 145 LH 146
           LH
Sbjct: 129 LH 130

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 41.9 bits (98), Expect = 3e-05
 Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 15/129 (11%)

Query: 23  DLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGR 81
           D R+ LDS + +    G  G   +   + HTG  +AVK ++       E + NEV  +  
Sbjct: 19  DPREYLDSFIKI--GEGSTGIVCI-ATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRD 75

Query: 82  IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSWEKLHEVALGT 138
            HH NVV +   Y  G +  +V E++  G+L     H   NE        E++  V L  
Sbjct: 76  YHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE--------EQIATVCLSV 127

Query: 139 ARGIEYLHN 147
            R + YLHN
Sbjct: 128 LRALSYLHN 136

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 42.1 bits (99), Expect = 3e-05
 Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 11/104 (10%)

Query: 44  GSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL 102
           G+ YKG+    G+   VK + + N S     +E++ +G++ H N+V+L+G         L
Sbjct: 704 GASYKGKSIKNGMQFVVKEINDVN-SIPS--SEIADMGKLQHPNIVKLIGLCRSEKGAYL 760

Query: 103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
           ++EY+   +L   +       ++ SWE+  ++A+G A+ + +LH
Sbjct: 761 IHEYIEGKNLSEVL-------RNLSWERRRKIAIGIAKALRFLH 797

Length = 968

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 41.9 bits (98), Expect = 3e-05
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 5/109 (4%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           GK  FG V+KG L     +AVK  +        ++F++E   + +  H N+V+L+G  ++
Sbjct: 4   GKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ 63

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
                +V E +P G     +   +   K+   ++L + AL  A G+ YL
Sbjct: 64  RQPIYIVMELVPGGDFLSFLRKKKDELKT---KQLVKFALDAAAGMAYL 109

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 41.9 bits (98), Expect = 3e-05
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 2/107 (1%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G   FG V+ G  +    +AVK L+    S   F+ E + +  + H  +V+L    ++  
Sbjct: 15  GAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE 74

Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
              ++ EYM  GSL   +  +E  G      KL + +   A G+ Y+
Sbjct: 75  PIYIITEYMAKGSLLDFLKSDE--GGKVLLPKLIDFSAQIAEGMAYI 119

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 41.7 bits (98), Expect = 4e-05
 Identities = 40/115 (34%), Positives = 53/115 (46%), Gaps = 12/115 (10%)

Query: 39  GKDGFGSVYKGQLHTGGLI----AVKMLEN-SNFSAVE-FINEVSTIGRIHHVNVVQLLG 92
           GK  FG VY G L          AVK L   ++   VE F+ E   +    H NV+ LLG
Sbjct: 4   GKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLG 63

Query: 93  FY--SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
               SEGS   +V  YM +G L R+   +E    +   + L    L  A+G+EYL
Sbjct: 64  ICLPSEGSP-LVVLPYMKHGDL-RNFIRSETHNPTV--KDLIGFGLQVAKGMEYL 114

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 41.4 bits (97), Expect = 4e-05
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 9/98 (9%)

Query: 53  TGGLIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA--LVYEYMP 108
           TG ++AVK L  E    +   +  E++ +  ++H N+V+  G  SE   +   L+ EY+P
Sbjct: 32  TGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVP 91

Query: 109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
            GSL  ++  +       +  +L   A     G+ YLH
Sbjct: 92  LGSLRDYLPKH-----KLNLAQLLLFAQQICEGMAYLH 124

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 41.4 bits (97), Expect = 5e-05
 Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 6/114 (5%)

Query: 39  GKDGFGSVYKGQLHTG---GLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGF 93
           G   FG V  G+ H G     + VK L  S      + F+ EV     ++H NV+Q LG 
Sbjct: 4   GNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQ 63

Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEK-LHEVALGTARGIEYLH 146
             E     LV E+ P G L  ++  N G     + +  L  +A   A G+ +LH
Sbjct: 64  CIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH 117

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 41.3 bits (97), Expect = 5e-05
 Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 38/141 (26%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE----FINE 75
           + DLR++           G   FG+VY  + + T  ++A+K +  S   + E     I E
Sbjct: 17  FTDLREI-----------GHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKE 65

Query: 76  VSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGS----LDRHIFPNEGRGKSFSWEKL 131
           V  + ++ H N ++  G Y       LV EY   GS    L+ H  P            L
Sbjct: 66  VRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDILEVHKKP------------L 112

Query: 132 HEVAL-----GTARGIEYLHN 147
            EV +     G  +G+ YLH+
Sbjct: 113 QEVEIAAICHGALQGLAYLHS 133

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 41.2 bits (97), Expect = 6e-05
 Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 11/109 (10%)

Query: 43  FGSVYKGQLHTGGL----IAVKMLENSNFSA--VEFINEVSTIGRIHHVNVVQLLGFYSE 96
           FGSV KG           +AVK L+  + +A   EF+ E S + ++ H  +V+L+G   +
Sbjct: 8   FGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGV-CK 66

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           G    LV E  P G L +++       +      L E+A   A G+ YL
Sbjct: 67  GEPLMLVMELAPLGPLLKYLKKR----REIPVSDLKELAHQVAMGMAYL 111

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 41.2 bits (97), Expect = 6e-05
 Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 16/117 (13%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVK-MLENSNFSAVEFI--NEVSTIGRIHHVNVVQLLGFY 94
           G+  +G V K +   TG ++A+K  LE+ +   V+ I   E+  + ++ H N+V L+  +
Sbjct: 10  GEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF 69

Query: 95  SEGSKRALVYEYMPNGSLDR-HIFPN---EGRGKSFSWEKLHEVALGTARGIEYLHN 147
               +  LV+E++ +  LD    +PN   E R + + ++ L        RGIE+ H+
Sbjct: 70  RRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQIL--------RGIEFCHS 118

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 41.2 bits (96), Expect = 7e-05
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 8/82 (9%)

Query: 39  GKDGFGSVYKGQL------HTGGLIAVKMLENSNFSAV--EFINEVSTIGRIHHVNVVQL 90
           G+D FG VYKG L           +A+K L++     +  EF +E     R+ H N+V L
Sbjct: 14  GEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCL 73

Query: 91  LGFYSEGSKRALVYEYMPNGSL 112
           LG  ++    ++++ Y  +  L
Sbjct: 74  LGVVTKEQPLSMIFSYCSHSDL 95

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 41.1 bits (96), Expect = 7e-05
 Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 21/127 (16%)

Query: 39  GKDGFGSVYKGQLHTGG------LIAVKMLENSNFSA-VEFINEVSTIGRIHHVNVVQLL 91
           G+  FG V+  + +         L+AVK L++   +A  +F  E   +  + H ++V+  
Sbjct: 14  GEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFY 73

Query: 92  GFYSEGSKRALVYEYMPNGSLDRHIF-------------PNEGRGKSFSWEKLHEVALGT 138
           G   +G    +V+EYM +G L++ +              P + +G+    + LH +A   
Sbjct: 74  GVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH-IASQI 132

Query: 139 ARGIEYL 145
           A G+ YL
Sbjct: 133 ASGMVYL 139

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 18/118 (15%)

Query: 39  GKDGFGSVYK-GQLHTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFY 94
           G+   G V+K     TG  +A+K +           + + E+  +    H  VV+LL  +
Sbjct: 9   GEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVF 68

Query: 95  SEGSKRALVYEYMPNGSLD-----RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             GS   LV EYMP+   +         P E + KS+    L        +G+ Y+H 
Sbjct: 69  PHGSGFVLVMEYMPSDLSEVLRDEERPLP-EAQVKSYMRMLL--------KGVAYMHA 117

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 40.2 bits (95), Expect = 1e-04
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 20/116 (17%)

Query: 43  FGSVYKGQ-LHTGGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
           +G VYK +   TG L+A+K +   N    F  +  I E+  + ++ H N+V+L    +  
Sbjct: 12  YGQVYKARNKKTGELVALKKIRMENEKEGFP-ITAIREIKLLQKLRHPNIVRLKEIVTSK 70

Query: 98  SKRA--LVYEYMP---NGSLDRHIFP-NEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            K +  +V+EYM     G LD       E + K +  + L         G++YLH+
Sbjct: 71  GKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLE--------GLQYLHS 118

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVK-MLENSNFSAVEFI--NEVSTIGRIHHVNVVQLLGFY 94
           G+  +G V K +   TG ++A+K   E+ +   V+     EV  + ++ H N+V L   +
Sbjct: 10  GEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAF 69

Query: 95  SEGSKRALVYEYMPNGSLD 113
               +  LV+EY+    L+
Sbjct: 70  RRKGRLYLVFEYVERTLLE 88

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE-FINEVSTIGRIHHVNVVQLLGFYSE 96
           GK  +G VY  + L T   IA+K +   +   V+    E++    + H N+VQ LG  SE
Sbjct: 17  GKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSE 76

Query: 97  GSKRALVYEYMPNGSL 112
                +  E +P GSL
Sbjct: 77  NGFFKIFMEQVPGGSL 92

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 21/127 (16%)

Query: 26  KLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLEN--SNFSAVEFINEVST 78
           KLL SG+          FG+V+KG     G      +A+K +++     +  E  + +  
Sbjct: 13  KLLGSGV----------FGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLA 62

Query: 79  IGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGT 138
           +G + H  +V+LLG    G+   LV +  P GSL  H+  +     S   ++L    +  
Sbjct: 63  MGSLDHAYIVRLLGI-CPGASLQLVTQLSPLGSLLDHVRQHRD---SLDPQRLLNWCVQI 118

Query: 139 ARGIEYL 145
           A+G+ YL
Sbjct: 119 AKGMYYL 125

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 15/120 (12%)

Query: 39  GKDGFGSVYKGQLHTGG-----------LIAVKMLENSNFSAVEFINEVSTIGRIHHVNV 87
           G+  F ++YKG L                + +K+L + +  ++ F    S + ++ H ++
Sbjct: 4   GQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHL 63

Query: 88  VQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           V+L G      +  +V EY+  G LD  +   E    S  W KL +VA   A  + YL +
Sbjct: 64  VKLYGV-CVRDENIMVEEYVKFGPLDVFL-HREKNNVSLHW-KL-DVAKQLASALHYLED 119

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 15/91 (16%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKML---ENSNFSAVEFINEV 76
           Y+ L K+           G+  +G VYK +   TG ++A+K +     S       + E+
Sbjct: 1   YQKLGKI-----------GEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREI 49

Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYM 107
             +  ++H N+++LL  +       LV+E+M
Sbjct: 50  KLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 39.5 bits (92), Expect = 3e-04
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 16/121 (13%)

Query: 39  GKDGFGSVYKGQL------HTGGL-IAVKMLENSNFSA--VEFINEVSTIGRIHHVNVVQ 89
           G   FG VY+G         +G + +AVK L          EF+ E   +   +H N+V+
Sbjct: 4   GSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVK 63

Query: 90  LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSF-----SWEKLHEVALGTARGIEY 144
           LLG       + ++ E M  G L  ++   + R + F     + ++L ++ L  A+G  Y
Sbjct: 64  LLGVCLLNEPQYIIMELMEGGDLLSYL--RDARVERFGPPLLTLKELLDICLDVAKGCVY 121

Query: 145 L 145
           L
Sbjct: 122 L 122

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 12/102 (11%)

Query: 50  QLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP 108
              TG  +AVK ++       E + NEV  +    H N+V++   Y  G +  +V E++ 
Sbjct: 40  DKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99

Query: 109 NGSLD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            G+L     H   NE        E++  V L   + + +LH 
Sbjct: 100 GGALTDIVTHTRMNE--------EQIATVCLAVLKALSFLHA 133

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 14/111 (12%)

Query: 43  FGSVYKG-QLHTGGLIAVKM--LENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSEGS 98
           FG VY    L TG L+AVK   +++++   ++ I +E+  +  + H N+V+  G      
Sbjct: 13  FGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE 72

Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA---RGIEYLH 146
           K  +  EY   G+L+       GR         H + + T     G+ YLH
Sbjct: 73  KVYIFMEYCSGGTLEE--LLEHGR-----ILDEHVIRVYTLQLLEGLAYLH 116

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 5/111 (4%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLE-NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           G   FG VYK Q   TG   A K+++  S     +F+ E+  +    H N+V L   Y  
Sbjct: 14  GDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFY 73

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            +K  ++ E+   G+LD  +   E   +  +  ++  V       + +LH+
Sbjct: 74  ENKLWILIEFCDGGALDSIMLELE---RGLTEPQIRYVCRQMLEALNFLHS 121

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 38.8 bits (90), Expect = 4e-04
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 8/82 (9%)

Query: 39  GKDGFGSVYKG-QLHTGGL-----IAVKML-ENSNFSAV-EFINEVSTIGRIHHVNVVQL 90
           G+  FG V K       G      +AVKML EN++ S + + ++E + + +++H +V++L
Sbjct: 9   GEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKL 68

Query: 91  LGFYSEGSKRALVYEYMPNGSL 112
            G  S+     L+ EY   GSL
Sbjct: 69  YGACSQDGPLLLIVEYAKYGSL 90

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 38.7 bits (90), Expect = 5e-04
 Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 3/114 (2%)

Query: 32  LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
           L L    G   FG V+ G  +    +A+K L+  + S   F+ E + + ++ H  +V+L 
Sbjct: 8   LKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLY 67

Query: 92  GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
              ++     ++ EYM NGSL   +   E  G   +  KL ++A   A G+ ++
Sbjct: 68  AVVTQ-EPIYIITEYMENGSLVDFLKTPE--GIKLTINKLIDMAAQIAEGMAFI 118

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 38.3 bits (90), Expect = 5e-04
 Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 23/121 (19%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSN---FSAVEF-INEVSTIGRIHHVNVVQLLGF 93
           GK  FG V   +   TG L A+K+L+         VE  + E + + RI+H  +V+L   
Sbjct: 2   GKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKL--H 59

Query: 94  YSEGSKRAL--VYEYMPNGSLDRHI-----FPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
           Y+  ++  L  V EY P G L  H+     F  E R + +      E+ L     +EYLH
Sbjct: 60  YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFS-EERARFY----AAEIVL----ALEYLH 110

Query: 147 N 147
           +
Sbjct: 111 S 111

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 38.5 bits (89), Expect = 5e-04
 Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 7/112 (6%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE-FINEVSTIGRIHHVNVVQLL-GFYS 95
           G   FG VYK Q   TG L A K+++  +   +E ++ E+  +    H N+V+LL  FY 
Sbjct: 14  GDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY 73

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           E +   L+ E+   G++D  +   E   +  +  ++  V   T   + YLH 
Sbjct: 74  ENNLWILI-EFCAGGAVDAVMLELE---RPLTEPQIRVVCKQTLEALNYLHE 121

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 38.5 bits (89), Expect = 5e-04
 Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 10/113 (8%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLE---NSNFSAVEFINEVSTIGRIHHVNVVQLLGFY 94
           G   +G VYK + ++TG L A+K+++     +F+ V+   E+  +    H N+V   G Y
Sbjct: 18  GSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQ--QEIIMMKDCKHSNIVAYFGSY 75

Query: 95  SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
               K  +  E+   GSL + I+   G     S  ++  V+  T +G+ YLH+
Sbjct: 76  LRRDKLWICMEFCGGGSL-QDIYHVTG---PLSESQIAYVSRETLQGLYYLHS 124

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 38.5 bits (89), Expect = 5e-04
 Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 18/117 (15%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKM--LENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
           GK  FG VYKG    T  ++A+K+  LE +     +   E++ + +     + +  G Y 
Sbjct: 13  GKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYL 72

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA-----RGIEYLHN 147
           +G+K  ++ EY+  GS    + P            L E  + T      +G++YLH+
Sbjct: 73  KGTKLWIIMEYLGGGSALDLLKPG----------PLEETYIATILREILKGLDYLHS 119

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 38.5 bits (89), Expect = 5e-04
 Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)

Query: 39  GKDGFGSVYKG------QLHTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQL 90
           G+  FG VY+G      +      +A+K +  +      +EF+NE S +   +  +VV+L
Sbjct: 15  GQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 74

Query: 91  LGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFS---WEKLHEVALGTARGIEY 144
           LG  S+G    ++ E M  G L    R + P        +    +K+ ++A   A G+ Y
Sbjct: 75  LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAY 134

Query: 145 LH 146
           L+
Sbjct: 135 LN 136

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 7/85 (8%)

Query: 39  GKDGFGSVYKGQLHT------GGLIAVKMLENSNFSA-VEFINEVSTIGRIHHVNVVQLL 91
           G+  FG V+  + +         L+AVK L++++ +A  +F  E   +  + H ++V+  
Sbjct: 14  GEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFY 73

Query: 92  GFYSEGSKRALVYEYMPNGSLDRHI 116
           G   EG    +V+EYM +G L++ +
Sbjct: 74  GVCVEGDPLIMVFEYMKHGDLNKFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 38.3 bits (89), Expect = 6e-04
 Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 6/112 (5%)

Query: 39  GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV---EFINEVSTIGRIHHVNVVQLLGFY 94
           GK  FG V+K        + A+K ++ S  +     E I+E   + ++    +++    +
Sbjct: 9   GKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF 68

Query: 95  SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
            +  K  +V EY  NG L  H      RG+    +++    +    G+ +LH
Sbjct: 69  LDKGKLNIVMEYAENGDL--HKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH 118

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 38.3 bits (89), Expect = 6e-04
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 23/126 (18%)

Query: 36  WSSGK----DGFGSVYKG-QLHTGGLIAVKMLE--NSNFSAVEFIN----EVSTIGRIHH 84
           W  GK      FG VY    + TG  +AVK +     +    + +N    E+  +  + H
Sbjct: 4   WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQH 63

Query: 85  VNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP----NEGRGKSFSWEKLHEVALGTAR 140
             +VQ  G   +    ++  EYMP GS+   +       E   + ++ + L         
Sbjct: 64  ERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILE-------- 115

Query: 141 GIEYLH 146
           G+EYLH
Sbjct: 116 GVEYLH 121

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 38.0 bits (88), Expect = 7e-04
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 12/88 (13%)

Query: 39  GKDGFGSVY--------KGQLHTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVV 88
           G+  FG VY        KG+  T   +AVK +  S      +EF+NE S +      +VV
Sbjct: 15  GQGSFGMVYEGNARDIIKGEAET--RVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 72

Query: 89  QLLGFYSEGSKRALVYEYMPNGSLDRHI 116
           +LLG  S+G    +V E M +G L  ++
Sbjct: 73  RLLGVVSKGQPTLVVMELMAHGDLKSYL 100

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 37.0 bits (86), Expect = 0.002
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 4/73 (5%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKM--LENSNFSAVEF-INEVSTIGRIHHVNVVQLLGFY 94
           G+  +G VYKG+   TG ++A+K   LE+         I E+S +  + H N+V L    
Sbjct: 9   GEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVL 68

Query: 95  SEGSKRALVYEYM 107
            + S+  L++E++
Sbjct: 69  MQESRLYLIFEFL 81

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 18/125 (14%)

Query: 39  GKDGFGSVYKGQLHTGGL---IAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQLLG 92
           G+  FG V K ++   GL    A+K ++   S     +F  E+  + ++ HH N++ LLG
Sbjct: 4   GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG 63

Query: 93  FYSEGSKRALVYEYMPNGSL------------DRHIFPNEGRGKSFSWEKLHEVALGTAR 140
                    L  EY P+G+L            D           + S ++L   A   AR
Sbjct: 64  ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR 123

Query: 141 GIEYL 145
           G++YL
Sbjct: 124 GMDYL 128

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 7/91 (7%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEF----INEVSTIGRIHHVNVVQLLGF 93
           GK  F  VYK   L  G ++A+K ++       +     + E+  + ++ H NV++ L  
Sbjct: 11  GKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLAS 70

Query: 94  YSEGSKRALVYEYMPNGSLDRHI--FPNEGR 122
           + E ++  +V E    G L R I  F  + R
Sbjct: 71  FIENNELNIVLELADAGDLSRMIKHFKKQKR 101

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 36.4 bits (84), Expect = 0.002
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSE 96
           G+   G+VY    + TG  +A+K +        E I NE+  +    H N+V  L  Y  
Sbjct: 28  GQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV 87

Query: 97  GSKRALVYEYMPNGSL 112
           G +  +V EY+  GSL
Sbjct: 88  GDELWVVMEYLAGGSL 103

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 17/132 (12%)

Query: 24  LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-----IAVKMLENSN--FSAVEFINEV 76
           LR L ++ L      G   FG+VYKG     G      +A+K+L  +    + VEF++E 
Sbjct: 1   LRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEA 60

Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEGRGKSFSWEKLHE 133
             +  + H ++V+LLG     + + LV + MP+G L  ++     N G     +W     
Sbjct: 61  LIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLDYVHEHKDNIGSQLLLNW----- 114

Query: 134 VALGTARGIEYL 145
             +  A+G+ YL
Sbjct: 115 -CVQIAKGMMYL 125

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 36.2 bits (84), Expect = 0.003
 Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 27/131 (20%)

Query: 39  GKDGFGSVYKGQL-----HTGGL-IAVKMLENSNFSAVEFINEVS------TIGRIHHVN 86
           G+  FG V K +            +AVKML+  + +  +  + VS       IG+  H N
Sbjct: 21  GEGAFGQVVKAEAVGLDNPNETSTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGK--HKN 77

Query: 87  VVQLLGFYSEGSKRALVYEYMPNGSL------------DRHIFPNEGRGKSFSWEKLHEV 134
           ++ LLG  ++     +V EY  +G+L                       ++ + + L   
Sbjct: 78  IINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSF 137

Query: 135 ALGTARGIEYL 145
           A   ARG+E+L
Sbjct: 138 AYQVARGMEFL 148

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 36.1 bits (83), Expect = 0.003
 Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 18/125 (14%)

Query: 39  GKDGFGSVYKGQLHTGGL---IAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQLLG 92
           G+  FG V +  +   GL    A+KML+   S     +F  E+  + ++ HH N++ LLG
Sbjct: 11  GEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLG 70

Query: 93  FYSEGSKRALVYEYMPNGSL------------DRHIFPNEGRGKSFSWEKLHEVALGTAR 140
                    +  EY P G+L            D       G   + + ++L + A   A 
Sbjct: 71  ACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVAT 130

Query: 141 GIEYL 145
           G++YL
Sbjct: 131 GMQYL 135

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 36.1 bits (83), Expect = 0.003
 Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 18/125 (14%)

Query: 39  GKDGFGSVYKGQLHTGGL---IAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQLLG 92
           G+  FG V K ++   GL    A+K ++   S     +F  E+  + ++ HH N++ LLG
Sbjct: 16  GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG 75

Query: 93  FYSEGSKRALVYEYMPNGSL------------DRHIFPNEGRGKSFSWEKLHEVALGTAR 140
                    L  EY P+G+L            D           + S ++L   A   AR
Sbjct: 76  ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR 135

Query: 141 GIEYL 145
           G++YL
Sbjct: 136 GMDYL 140

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 36.2 bits (84), Expect = 0.003
 Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 18/120 (15%)

Query: 43  FGSVYKGQLHTGGL-----IAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFY 94
           FG ++ G L          + VK +++ + S ++    + E   +  + H N++ +L   
Sbjct: 19  FGRIFYGILIDEKPGKEEEVFVKTVKD-HASEIQVTLLLQESCLLYGLSHQNILPILHVC 77

Query: 95  SEGSKRALV-YEYMPNGSLD------RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            E  +   V Y YM  G+L       R         ++ S ++L  +A+  A G+ YLH 
Sbjct: 78  IEDGEPPFVLYPYMNWGNLKLFLQQCRLG--EANNPQALSTQQLVHMAIQIACGMSYLHK 135

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 36.0 bits (84), Expect = 0.003
 Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 23/117 (19%)

Query: 43  FGSVYKGQL-HTGGLIAVKMLENSNFSA---VEFI-NEVSTIGRIHHVNVVQLLGFYSEG 97
           FG V   +   +G   A+K+L  +       VE + NE   +  I H  +V L G + + 
Sbjct: 14  FGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD 73

Query: 98  SKRALVYEYMPNGSLDRHI-----FPNEGRGKSFSWEKLH--EVALGTARGIEYLHN 147
           S   LV EY+P G L  H+     FP           + +  +V L     +EYLH+
Sbjct: 74  SNLYLVMEYVPGGELFSHLRKSGRFPEP-------VARFYAAQVVL----ALEYLHS 119

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 35.9 bits (83), Expect = 0.003
 Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 6/80 (7%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKM--LENSNFSAVEFINEVSTIGRIHHV---NVVQLLG 92
           G+  +G+VY+G  + TG ++A+K+  L+  +    +   EV+ + ++      N+ +  G
Sbjct: 10  GRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYG 69

Query: 93  FYSEGSKRALVYEYMPNGSL 112
            Y +G +  ++ EY   GS+
Sbjct: 70  SYLKGPRLWIIMEYAEGGSV 89

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 36.2 bits (83), Expect = 0.004
 Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 9/125 (7%)

Query: 23  DLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGR 81
           D R LL++ + +    G  G   + + + H+G  +AVKM++       E + NEV  +  
Sbjct: 18  DPRSLLENYIKI--GEGSTGIVCIAR-EKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRD 74

Query: 82  IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
             H NVV++   Y  G +  ++ E++  G+L   +  ++ R    + E++  V     + 
Sbjct: 75  YQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIV--SQTR---LNEEQIATVCESVLQA 129

Query: 142 IEYLH 146
           + YLH
Sbjct: 130 LCYLH 134

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 35.8 bits (83), Expect = 0.004
 Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 35/126 (27%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKML------ENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
           G+  +G VYK +   TG ++A+K +      E    +A   I E+S +  ++H N+V+LL
Sbjct: 8   GEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTA---IREISLLKELNHPNIVRLL 64

Query: 92  GFYSEGSKRALVYEYM-----------PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTAR 140
                 +K  LV+E++           P   LD  +       KS+ ++ L        +
Sbjct: 65  DVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLI------KSYLYQLL--------Q 110

Query: 141 GIEYLH 146
           GI Y H
Sbjct: 111 GIAYCH 116

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 35.8 bits (82), Expect = 0.004
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKM--LENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
           GK  FG V+KG    T  ++A+K+  LE +     +   E++ + +     V +  G Y 
Sbjct: 13  GKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL 72

Query: 96  EGSKRALVYEYMPNGS-LDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           +G+K  ++ EY+  GS LD        R   F   ++  +     +G++YLH+
Sbjct: 73  KGTKLWIIMEYLGGGSALDLL------RAGPFDEFQIATMLKEILKGLDYLHS 119

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	148
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.95
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.93
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.92
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.92
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.9
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.9
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.89
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.89
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.89
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.88
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.87
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.87
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.87
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.87
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.86
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.86
KOG0610	459	consensus Putative serine/threonine protein kinase	99.86
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.86
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.85
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.85
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.85
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.85
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.85
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.85
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.85
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.85
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.85
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.84
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.84
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.84
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.84
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.84
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.84
KOG0605	550	consensus NDR and related serine/threonine kinases	99.84
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.83
KOG0589	426	consensus Serine/threonine protein kinase [General	99.83
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.83
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.83
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.83
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.83
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.83
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.83
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.83
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.83
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.83
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.83
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.83
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.83
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.82
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.82
KOG0586	596	consensus Serine/threonine protein kinase [General	99.82
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.82
KOG0198	313	consensus MEKK and related serine/threonine protei	99.82
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.82
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.82
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.82
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.82
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.82
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.82
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.82
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.82
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.82
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.81
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.81
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.81
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.81
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.81
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.81
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.81
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.81
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.81
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.81
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.81
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.81
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.81
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.81
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.81
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.81
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.81
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.81
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.8
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.8
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.8
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.8
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.8
KOG0578	550	consensus p21-activated serine/threonine protein k	99.8
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.8
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.8
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.8
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.8
PHA02988	283	hypothetical protein; Provisional	99.8
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.8
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.8
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.8
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.8
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.8
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.8
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.8
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.8
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.8
PTZ00267	478	NIMA-related protein kinase; Provisional	99.79
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.79
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.79
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.79
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.79
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.79
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.79
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.79
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.79
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.79
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.79
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.79
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.79
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.79
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.79
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.79
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.79
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.79
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.79
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.79
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.79
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.79
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.78
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.78
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.78
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.78
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.78
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.78
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.78
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.78
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.78
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.78
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.78
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.78
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.78
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.78
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.78
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.78
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.78
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.78
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.78
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.78
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.78
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.78
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.78
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.78
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.78
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.78
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.78
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.78
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.78
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.78
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.78
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.78
PHA03212	391	serine/threonine kinase US3; Provisional	99.78
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.78
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.77
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.77
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.77
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.77
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.77
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.77
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.77
PTZ00283	496	serine/threonine protein kinase; Provisional	99.77
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.77
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.77
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.77
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.77
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.77
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.77
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.77
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.77
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.77
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.77
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.77
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.77
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.77
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.77
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.77
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.77
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.77
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.77
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.77
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.77
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.76
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.76
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.76
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.76
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.76
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.76
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.76
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.76
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.76
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.76
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.76
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.76
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.76
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.76
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.76
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.76
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.76
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.76
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.76
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.76
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.76
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.76
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.76
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.76
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.76
PTZ00036	440	glycogen synthase kinase; Provisional	99.75
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.75
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.75
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.75
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.75
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.75
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.75
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.75
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.75
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.75
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.75
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.75
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.75
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.75
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.75
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.75
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.75
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.75
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.75
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.75
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.75
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.75
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.75
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.75
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.75
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.75
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.75
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.75
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.75
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.75
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.75
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.75
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.74
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.74
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.74
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.74
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.74
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.74
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.74
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.74
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.74
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.74
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.74
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.74
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.74
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.74
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.74
PHA03209	357	serine/threonine kinase US3; Provisional	99.73
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.73
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.73
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.73
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.73
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.73
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.73
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.73
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.73
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.73
PLN00009	294	cyclin-dependent kinase A; Provisional	99.73
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.73
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.73
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.73
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.73
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.73
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.73
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.73
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.73
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.73
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.73
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.73
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.73
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.72
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.72
KOG0584	632	consensus Serine/threonine protein kinase [General	99.72
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.72
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.72
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.72
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.72
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.72
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.72
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.72
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.72
PHA03207	392	serine/threonine kinase US3; Provisional	99.72
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.72
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.72
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.72
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.72
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.72
KOG1152	772	consensus Signal transduction serine/threonine kin	99.71
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.71
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.71
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.71
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.71
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.71
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.71
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.71
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.71
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.71
PHA03211	461	serine/threonine kinase US3; Provisional	99.71
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.7
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.7
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.7
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.7
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.7
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.7
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.7
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.7
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.7
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.7
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.7
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.7
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.7
KOG3653	534	consensus Transforming growth factor beta/activin	99.7
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.7
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.69
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.69
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.69
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.69
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.69
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.69
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.69
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.69
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.69
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.69
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.69
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.69
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.68
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.68
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.68
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.68
PTZ00284	467	protein kinase; Provisional	99.68
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.68
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.68
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.68
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.67
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.67
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.67
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.67
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.67
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.67
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.66
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.66
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.66
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.66
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.66
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.66
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.66
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.65
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.65
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.65
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.64
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.64
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.64
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.64
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.63
PHA03210	501	serine/threonine kinase US3; Provisional	99.63
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.63
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.63
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.63
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.63
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.62
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.61
PRK09188	365	serine/threonine protein kinase; Provisional	99.61
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.61
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.61
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.61
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.6
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.6
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.59
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.59
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.59
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.57
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.56
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.55
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.53
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.53
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.52
PRK10345	210	hypothetical protein; Provisional	99.51
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.5
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.5
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.48
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.48
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.47
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.46
smart00090	237	RIO RIO-like kinase.	99.44
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.44
PHA02882	294	putative serine/threonine kinase; Provisional	99.43
PRK14879	211	serine/threonine protein kinase; Provisional	99.42
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.41
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.4
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.39
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.38
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.37
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.35
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.35
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.32
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.31
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.29
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.29
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.28
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.26
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.26
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.25
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.18
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.17
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.17
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.12
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.12
PRK12274	218	serine/threonine protein kinase; Provisional	99.09
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.05
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.03
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.03
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.97
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.94
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	98.83
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.69
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.46
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.42
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.4
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.39
KOG1243	690	consensus Protein kinase [General function predict	98.34
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.23
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.08
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.03
PLN02876	822	acyl-CoA dehydrogenase	98.0
PRK10593	297	hypothetical protein; Provisional	97.96
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.83
KOG1266	458	consensus Protein kinase [Signal transduction mech	97.81
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	97.8
PLN00181	793	protein SPA1-RELATED; Provisional	97.78
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.72
KOG3087	229	consensus Serine/threonine protein kinase [General	97.57
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	97.57
PF01636	239	APH: Phosphotransferase enzyme family This family	97.55
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.54
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.4
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.25
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.21
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.21
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.16
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.12
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	96.99
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	96.89
KOG1235	538	consensus Predicted unusual protein kinase [Genera	96.65
PRK09550	401	mtnK methylthioribose kinase; Reviewed	96.41
COG0478	304	RIO-like serine/threonine protein kinase fused to	96.41
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	96.2
PRK09902	216	hypothetical protein; Provisional	96.13
KOG2270	520	consensus Serine/threonine protein kinase involved	96.11
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	96.06
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.88
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	95.48
KOG0576	829	consensus Mitogen-activated protein kinase kinase	95.35
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	95.35
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	95.19
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	94.89
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	94.63
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	94.29
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	93.96
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	93.69
PLN02756	418	S-methyl-5-thioribose kinase	93.65
KOG0606	1205	consensus Microtubule-associated serine/threonine	93.46
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	93.29
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	93.26
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	93.15
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	91.6
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	90.71
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	90.33
PRK05231	319	homoserine kinase; Provisional	90.01
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	89.45
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	88.85
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	87.19
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	86.89
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	84.8
PRK12396	409	5-methylribose kinase; Reviewed	83.27
KOG0606	1205	consensus Microtubule-associated serine/threonine	83.12
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	82.82
PLN02236	344	choline kinase	81.89
PTZ00384	383	choline kinase; Provisional	80.05

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.95  E-value=7.8e-27  Score=163.44  Aligned_cols=115  Identities=23%  Similarity=0.415  Sum_probs=103.6

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      .+|.+...||.|+|++||+|+++ ++..||||.+.+....   .+.+..|+++|+.++||||+.++++...++.+++|||
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME   89 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME   89 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence            47888888999999999999964 6789999999886543   3447899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||.||||.+++    ...+.+++..+..++.|++.||++||++
T Consensus        90 yC~gGDLs~yi----~~~~~l~e~t~r~Fm~QLA~alq~L~~~  128 (429)
T KOG0595|consen   90 YCNGGDLSDYI----RRRGRLPEATARHFMQQLASALQFLHEN  128 (429)
T ss_pred             eCCCCCHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999    4556799999999999999999999975

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=4.3e-25  Score=157.84  Aligned_cols=130  Identities=45%  Similarity=0.809  Sum_probs=115.3

Q ss_pred             CCCCCcHHHHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeE
Q 041447           15 SVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGF   93 (148)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~   93 (148)
                      ....+++.++.+++. +|.-.+.||+|+||.||+|...++..+|||.+...... ..+|.+|+.++.+++|||+++++|+
T Consensus        61 ~~~~fs~~el~~AT~-~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy  139 (361)
T KOG1187|consen   61 PLRSFSYDELRKATN-NFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY  139 (361)
T ss_pred             CcceeeHHHHHHHHh-CCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence            445578999999985 88888999999999999999887899999988775554 5669999999999999999999999


Q ss_pred             EEeCC-eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           94 YSEGS-KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        94 ~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |.+.+ ..+||+||+++|+|.+++......  +++|..+..|+.++|.||+|||+
T Consensus       140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~  192 (361)
T KOG1187|consen  140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHE  192 (361)
T ss_pred             EecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHcc
Confidence            99988 599999999999999999654322  78999999999999999999997

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=2.8e-24  Score=156.80  Aligned_cols=115  Identities=24%  Similarity=0.372  Sum_probs=105.5

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccC----CCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLEN----SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ..|.....||+|||+.||.++. .+|..+|+|++.+    +....+...+|+++.++++||||++++++|++.++.|||.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4699999999999999999996 7899999999987    3334566899999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |.|..++|..++    ...++++++.+..+++||+.||.|||++
T Consensus        98 ELC~~~sL~el~----Krrk~ltEpEary~l~QIv~GlkYLH~~  137 (592)
T KOG0575|consen   98 ELCHRGSLMELL----KRRKPLTEPEARYFLRQIVEGLKYLHSL  137 (592)
T ss_pred             EecCCccHHHHH----HhcCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            999999999988    4567899999999999999999999975

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=2.2e-24  Score=151.54  Aligned_cols=119  Identities=20%  Similarity=0.317  Sum_probs=103.9

Q ss_pred             HhhhcCceeecccccccceEEEEEE-ecCCCEEEEEEccCCCcC--------HHHHHHHHHHHhcCCCCcccceeeEEEe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFS--------AVEFINEVSTIGRIHHVNVVQLLGFYSE   96 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~-~~~~~~~avk~~~~~~~~--------~~~~~~e~~~l~~l~~~~i~~~~~~~~~   96 (148)
                      +...+.|.+.+.||+|+||.|-.|. .++++.||+|++++....        .....+|+++|++++||+|++++++|+.
T Consensus       168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~  247 (475)
T KOG0615|consen  168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV  247 (475)
T ss_pred             chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec
Confidence            4466788899999999999999998 568999999999773321        1235799999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           97 GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        97 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+.||||||++||+|.+.+    -..+.+.++....++.|++.|+.|||++
T Consensus       248 ~ds~YmVlE~v~GGeLfd~v----v~nk~l~ed~~K~~f~Qll~avkYLH~~  295 (475)
T KOG0615|consen  248 PDSSYMVLEYVEGGELFDKV----VANKYLREDLGKLLFKQLLTAVKYLHSQ  295 (475)
T ss_pred             CCceEEEEEEecCccHHHHH----HhccccccchhHHHHHHHHHHHHHHHHc
Confidence            99999999999999999999    4456778888899999999999999985

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.90  E-value=8.3e-24  Score=152.19  Aligned_cols=125  Identities=26%  Similarity=0.439  Sum_probs=113.9

Q ss_pred             HHHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        22 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      .+.+++..+.+++.+.||+|.||.||.|.++....+|+|.+.......+.|.+|+.+|++++|++|+++++++..+..++
T Consensus       198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piy  277 (468)
T KOG0197|consen  198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIY  277 (468)
T ss_pred             cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceE
Confidence            66777888889999999999999999999987778999999988778889999999999999999999999999988999


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||||++.|+|.+++..  ..+..+...+.+.++.|||.||+||.++
T Consensus       278 IVtE~m~~GsLl~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLes~  322 (468)
T KOG0197|consen  278 IVTEYMPKGSLLDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLESK  322 (468)
T ss_pred             EEEEecccCcHHHHhhh--cCCCccchHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999954  2456689999999999999999999864

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.90  E-value=6e-24  Score=150.01  Aligned_cols=115  Identities=19%  Similarity=0.332  Sum_probs=104.7

Q ss_pred             cCceeecccccccceEEEEEE-ecCCCEEEEEEccCCCcCHH----HHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~-~~~~~~~avk~~~~~~~~~~----~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      .+|++.+.||+|+||+|-++. +..|+.||+|.|+++....+    .+.+|+++|+.++||||++++++|+..+.+.|||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            478999999999999999998 56899999999987555332    3779999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||..+|.|.+++    ...+.+++..+..+++||..|+-|||.|
T Consensus       133 EYaS~GeLYDYi----Ser~~LsErEaRhfFRQIvSAVhYCHkn  172 (668)
T KOG0611|consen  133 EYASGGELYDYI----SERGSLSEREARHFFRQIVSAVHYCHKN  172 (668)
T ss_pred             EecCCccHHHHH----HHhccccHHHHHHHHHHHHHHHHHHhhc
Confidence            999999999999    6677899999999999999999999975

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.89  E-value=3.3e-23  Score=148.71  Aligned_cols=116  Identities=24%  Similarity=0.413  Sum_probs=100.5

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeC--CeEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEG--SKRAL  102 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~l  102 (148)
                      .+.|+.+++||+|+||.||+|+. .+|+.||+|.+...+..   ..-..+|+.+|+++.||||+++.+.....  +.+||
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl  195 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL  195 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence            35688889999999999999994 68999999999775543   33478999999999999999999998776  78999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|||++ ||.-++   ....-.+++.++..+|.|++.||+|||++
T Consensus       196 VFeYMdh-DL~GLl---~~p~vkft~~qIKc~mkQLl~Gl~~cH~~  237 (560)
T KOG0600|consen  196 VFEYMDH-DLSGLL---SSPGVKFTEPQIKCYMKQLLEGLEYCHSR  237 (560)
T ss_pred             EEecccc-hhhhhh---cCCCcccChHHHHHHHHHHHHHHHHHhhc
Confidence            9999998 888877   23456799999999999999999999975

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.89  E-value=7.7e-23  Score=145.84  Aligned_cols=123  Identities=32%  Similarity=0.545  Sum_probs=104.3

Q ss_pred             HHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCC-e
Q 041447           24 LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGS-K   99 (148)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~   99 (148)
                      .+.+..+++...+.+|+|+||+||++.++....+|+|++.....+   ...+.+|+.+|.+++||||++++|++..+. .
T Consensus        35 ~~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~  114 (362)
T KOG0192|consen   35 EEEIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGS  114 (362)
T ss_pred             ceecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence            344445566777889999999999999873434999999775444   346999999999999999999999999887 7


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++||||+++|+|.+++..+  ....++...+..++.||+.||+|||++
T Consensus       115 ~~iVtEy~~~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~  161 (362)
T KOG0192|consen  115 LCIVTEYMPGGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSE  161 (362)
T ss_pred             eEEEEEeCCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999543  357799999999999999999999975

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.89  E-value=1.5e-22  Score=140.58  Aligned_cols=116  Identities=25%  Similarity=0.338  Sum_probs=102.5

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCCEEEEEEccC--CCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCC-eEEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS-KRALV  103 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv  103 (148)
                      ..++++..+.||+|+.|+||+++++ +++.+|+|.+..  .....+++.+|++++..++||+|+++++.|...+ .+.|+
T Consensus        77 ~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~  156 (364)
T KOG0581|consen   77 SLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISIC  156 (364)
T ss_pred             CHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEee
Confidence            3457788899999999999999974 789999999944  2333566899999999999999999999999988 49999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ||||++|+|++++    ...+.+++.....++.++++||.|||+
T Consensus       157 mEYMDgGSLd~~~----k~~g~i~E~~L~~ia~~VL~GL~YLh~  196 (364)
T KOG0581|consen  157 MEYMDGGSLDDIL----KRVGRIPEPVLGKIARAVLRGLSYLHE  196 (364)
T ss_pred             hhhcCCCCHHHHH----hhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999998    445779999999999999999999996

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=4.2e-24  Score=144.27  Aligned_cols=121  Identities=21%  Similarity=0.308  Sum_probs=104.0

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceee-EEEeCCe-E
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLG-FYSEGSK-R  100 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~-~~~~~~~-~  100 (148)
                      .+..+|++.+++|+|.||.||++.. .+|..+|.|.+.-...+.   +.+..|+.+|++++||||+++++ .+..++. +
T Consensus        16 ~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl   95 (375)
T KOG0591|consen   16 KTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL   95 (375)
T ss_pred             ccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence            3456789999999999999999984 689999999998655543   45889999999999999999998 4544444 8


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +|+||+|.+|||.+.++.-+...+.+++..+|.++.|++.||.+||+
T Consensus        96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~  142 (375)
T KOG0591|consen   96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHS  142 (375)
T ss_pred             HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999887655667889999999999999999999997

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.87  E-value=5.1e-22  Score=144.41  Aligned_cols=128  Identities=31%  Similarity=0.449  Sum_probs=107.1

Q ss_pred             CCcHHHHHHhhhcCceeecccccccceEEEEEEec--CC---CEEEEEEccCCC-c---CHHHHHHHHHHHhcCCCCccc
Q 041447           18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLH--TG---GLIAVKMLENSN-F---SAVEFINEVSTIGRIHHVNVV   88 (148)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~--~~---~~~avk~~~~~~-~---~~~~~~~e~~~l~~l~~~~i~   88 (148)
                      .+-....|++.+++..+.+.||+|+||.||+|+..  ++   ..||+|....+. .   ...++.+|+++|++++||||+
T Consensus       145 ~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVV  224 (474)
T KOG0194|consen  145 RPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVV  224 (474)
T ss_pred             ccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEE
Confidence            34445568888899999999999999999999843  22   238999887533 2   234589999999999999999


Q ss_pred             ceeeEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           89 QLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        89 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|+.....++++|||+|.||+|.+++..   ....++..+...++.+.+.||+|||+.
T Consensus       225 r~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k---~~~~v~~~ek~~~~~~AA~Gl~YLh~k  281 (474)
T KOG0194|consen  225 RFYGVAVLEEPLMLVMELCNGGSLDDYLKK---NKKSLPTLEKLRFCYDAARGLEYLHSK  281 (474)
T ss_pred             EEEEEEcCCCccEEEEEecCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHhHHHHHHHC
Confidence            999999999999999999999999999943   223699999999999999999999974

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.87  E-value=5.5e-22  Score=137.67  Aligned_cols=119  Identities=24%  Similarity=0.355  Sum_probs=106.8

Q ss_pred             HhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      ....++|++.++||+|+||+|+.++. .+++.+|+|++++...    +......|..+|..++||+|++++-.|.+.+.+
T Consensus        21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL  100 (357)
T KOG0598|consen   21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL  100 (357)
T ss_pred             cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence            45677999999999999999999985 5799999999987433    234477899999999999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|+||+.||.|...+    +..+.++++.+..++++|+.||.|||+.
T Consensus       101 ylVld~~~GGeLf~hL----~~eg~F~E~~arfYlaEi~lAL~~LH~~  144 (357)
T KOG0598|consen  101 YLVLDYLNGGELFYHL----QREGRFSEDRARFYLAEIVLALGYLHSK  144 (357)
T ss_pred             EEEEeccCCccHHHHH----HhcCCcchhHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999    6678899999999999999999999973

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.8e-21  Score=139.68  Aligned_cols=118  Identities=22%  Similarity=0.314  Sum_probs=102.7

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCC----Cc--CHHHHHHHHHHHhcCC-CCcccceeeEEEeCC
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS----NF--SAVEFINEVSTIGRIH-HVNVVQLLGFYSEGS   98 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~----~~--~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~   98 (148)
                      .....|.+++.||+|+||.|+.|.+ .++..+|+|+++..    ..  ..+...+|+.+++.+. ||||+++++++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            3455899999999999999999985 57899999987663    11  2334668999999998 999999999999999


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++|||||.||+|.+++    ...+++.+..+..++.|++.||+|||++
T Consensus        94 ~~~ivmEy~~gGdL~~~i----~~~g~l~E~~ar~~F~Qlisav~y~H~~  139 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYI----VNKGRLKEDEARKYFRQLISAVAYCHSR  139 (370)
T ss_pred             eEEEEEEecCCccHHHHH----HHcCCCChHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999    3457789999999999999999999974

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.87  E-value=2.8e-22  Score=146.20  Aligned_cols=114  Identities=23%  Similarity=0.365  Sum_probs=102.9

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHH---HHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAV---EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~---~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++|.+.+.+|+|+||.||+|+. .+.+.||+|.+.+.+...+   ...+|++++..++||||+.++++|++..++++|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            3678889999999999999995 4788999999988666543   47899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||.| +|..++    .....+|++++..++.|+..||.|||++
T Consensus        82 ~a~g-~L~~il----~~d~~lpEe~v~~~a~~LVsaL~yLhs~  119 (808)
T KOG0597|consen   82 YAVG-DLFTIL----EQDGKLPEEQVRAIAYDLVSALYYLHSN  119 (808)
T ss_pred             hhhh-hHHHHH----HhccCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            9988 999999    5667799999999999999999999975

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.86  E-value=1.9e-21  Score=130.27  Aligned_cols=115  Identities=24%  Similarity=0.420  Sum_probs=101.9

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++|...+.+|+|.||.||+|+. .+|+.||+|.+...+..   .....+|+..|+.++|+||+.+.++|-..+.+.||.|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            3577788999999999999995 58999999999876543   4458899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |++. ||+..++.   ....++..++..++.++++||+|||++
T Consensus        82 fm~t-dLe~vIkd---~~i~l~pa~iK~y~~m~LkGl~y~H~~  120 (318)
T KOG0659|consen   82 FMPT-DLEVVIKD---KNIILSPADIKSYMLMTLKGLAYCHSK  120 (318)
T ss_pred             eccc-cHHHHhcc---cccccCHHHHHHHHHHHHHHHHHHHhh
Confidence            9987 99999954   456789999999999999999999974

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=1.3e-22  Score=144.82  Aligned_cols=116  Identities=23%  Similarity=0.400  Sum_probs=103.2

Q ss_pred             hcCceeecccccccceEEEEEE-ecCCCEEEEEEccCCCcCHHH--HHHHHHHHhcCC-CCcccceeeEEEeCC-eEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE--FINEVSTIGRIH-HVNVVQLLGFYSEGS-KRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~-~~~~~~~avk~~~~~~~~~~~--~~~e~~~l~~l~-~~~i~~~~~~~~~~~-~~~lv  103 (148)
                      -++|.+++.||.|+||.||+|+ ..++..||+|.++..-...++  -.||+..|++++ ||||+++.+++.+.+ .+++|
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            4579999999999999999998 467889999999886666665  468999999998 999999999998877 99999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+. +|.+.++.   +...+++..+..|+.||++||+|+|.|
T Consensus        89 fE~Md~-NLYqLmK~---R~r~fse~~irnim~QilqGL~hiHk~  129 (538)
T KOG0661|consen   89 FEFMDC-NLYQLMKD---RNRLFSESDIRNIMYQILQGLAHIHKH  129 (538)
T ss_pred             HHhhhh-hHHHHHhh---cCCcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            999987 99999954   367899999999999999999999975

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.86  E-value=1.6e-21  Score=137.32  Aligned_cols=119  Identities=25%  Similarity=0.293  Sum_probs=103.8

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      +..++|++.+.||.|..|.||.+.. .+++.+|+|++++....    ..+...|-++|+.+.||.++.++..++.+...+
T Consensus        74 l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~c  153 (459)
T KOG0610|consen   74 LGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSC  153 (459)
T ss_pred             cCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeE
Confidence            3445788889999999999999995 46789999999874433    334778899999999999999999999999999


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ++||||+||+|...+.  +++.+.+++..+..++.+++.||+|||-
T Consensus       154 l~meyCpGGdL~~Lrq--kQp~~~fse~~aRFYaAEvl~ALEYLHm  197 (459)
T KOG0610|consen  154 LVMEYCPGGDLHSLRQ--KQPGKRFSESAARFYAAEVLLALEYLHM  197 (459)
T ss_pred             EEEecCCCccHHHHHh--hCCCCccchhhHHHHHHHHHHHHHHHHh
Confidence            9999999999988763  3677889999999999999999999994

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=3.9e-21  Score=138.03  Aligned_cols=115  Identities=22%  Similarity=0.294  Sum_probs=100.2

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|++.+.||+|+||.||.+.. .+++.+|+|++.....    ....+.+|+.++..++||||+++++.+.+++..+++|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            4789999999999999999996 4788999999975321    2234678999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|.+++.    ....+++..+..++.|++.||+|||++
T Consensus        81 E~~~~g~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~lH~~  120 (364)
T cd05599          81 EYLPGGDMMTLLM----KKDTFTEEETRFYIAETILAIDSIHKL  120 (364)
T ss_pred             CCCCCcHHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999883    345689999999999999999999974

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.85  E-value=1.4e-20  Score=135.73  Aligned_cols=115  Identities=21%  Similarity=0.205  Sum_probs=100.2

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|++.+.||+|+||.||+++. .+++.+|+|++.....    ....+.+|+.++..++||||+++++.+...+..+++|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            3789999999999999999985 4688999999865321    2344778999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|.+++    .....+++..+..++.||+.||+|||++
T Consensus        81 E~~~~g~L~~~i----~~~~~~~~~~~~~~~~qi~~al~~lH~~  120 (376)
T cd05598          81 DYIPGGDMMSLL----IRLGIFEEDLARFYIAELTCAIESVHKM  120 (376)
T ss_pred             eCCCCCcHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999998    3445689999999999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.85  E-value=1.3e-21  Score=133.39  Aligned_cols=114  Identities=19%  Similarity=0.308  Sum_probs=96.8

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .|+....+|+|++|.|++|+. .+|+.||||.+..+..+.   +...+|+.+|++++|||++.+.++|.....+++|.||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            467778889999999999995 589999999997655442   3488999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+. ++.+-+.   ....-++...+..++.|++.|+.|||++
T Consensus        83 ~dh-TvL~eLe---~~p~G~~~~~vk~~l~Q~l~ai~~cHk~  120 (396)
T KOG0593|consen   83 CDH-TVLHELE---RYPNGVPSELVKKYLYQLLKAIHFCHKN  120 (396)
T ss_pred             cch-HHHHHHH---hccCCCCHHHHHHHHHHHHHHhhhhhhc
Confidence            998 4444442   2334589999999999999999999975

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.85  E-value=8.2e-22  Score=148.49  Aligned_cols=130  Identities=25%  Similarity=0.428  Sum_probs=108.9

Q ss_pred             CcHHHHHHhhhcCceeecccccccceEEEEEEe------cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccce
Q 041447           19 PSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQL   90 (148)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~   90 (148)
                      .+-....+++..+..+.+.||+|+||+||+|..      .+...||||.++.....  +.+|.+|++++..++|||||++
T Consensus       475 ~~~~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrL  554 (774)
T KOG1026|consen  475 NPDLKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRL  554 (774)
T ss_pred             CCccceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEE
Confidence            334556677788899999999999999999982      23457899999775443  4569999999999999999999


Q ss_pred             eeEEEeCCeEEEEEeccCCCChhhcccccCCC----------CCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           91 LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGR----------GKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        91 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~----------~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|.+..++..++|.|||..|||.+|++.+...          ..+++..+.+.|+.|||.||+||-++
T Consensus       555 lGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~  622 (774)
T KOG1026|consen  555 LGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH  622 (774)
T ss_pred             EEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999764321          23388999999999999999999653

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=1.2e-20  Score=136.21  Aligned_cols=115  Identities=23%  Similarity=0.232  Sum_probs=99.6

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|.+.+.||+|+||.||++.. .+++.+|+|++.....    ....+.+|+.++..++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            3789999999999999999985 4788999999865322    1234678999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|.+++    .....+++..+..++.|++.||+|||++
T Consensus        81 E~~~gg~L~~~l----~~~~~~~~~~~~~~~~ql~~aL~~LH~~  120 (377)
T cd05629          81 EFLPGGDLMTML----IKYDTFSEDVTRFYMAECVLAIEAVHKL  120 (377)
T ss_pred             eCCCCCcHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999988    3445689999999999999999999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.85  E-value=2.4e-20  Score=127.85  Aligned_cols=116  Identities=26%  Similarity=0.390  Sum_probs=102.5

Q ss_pred             cCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      ++|++.+.||+|+||.||.+...++..+|+|.+.........+.+|+.+++.++||||+++++.+...+..+++|||+++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~   83 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN   83 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence            56889999999999999999877677899998876655667788999999999999999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|.+++...   ...+++..+..++.|++.||+|||++
T Consensus        84 ~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~  119 (256)
T cd05114          84 GCLLNYLRQR---QGKLSKDMLLSMCQDVCEGMEYLERN  119 (256)
T ss_pred             CcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999988432   24588999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=6.8e-21  Score=133.07  Aligned_cols=115  Identities=20%  Similarity=0.217  Sum_probs=100.1

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|++.+.||+|+||.||++.. .+++.+|+|++.....    ....+.+|+.++..++||||+++++.+.+.+..+++|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            4688999999999999999995 4788999999865332    2334778999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|.+++    .....+++..+..++.|++.||+|||++
T Consensus        81 e~~~~~~L~~~~----~~~~~~~~~~~~~~~~qi~~~l~~lH~~  120 (291)
T cd05612          81 EYVPGGELFSYL----RNSGRFSNSTGLFYASEIVCALEYLHSK  120 (291)
T ss_pred             eCCCCCCHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999988    3445689999999999999999999974

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.85  E-value=1.3e-20  Score=135.40  Aligned_cols=115  Identities=18%  Similarity=0.257  Sum_probs=100.0

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|++.+.||+|+||.||.+.. .+++.+|+|++.....    ....+.+|+.++..++||+|+++++.+.+....++||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            4789999999999999999985 4688999999865322    1234678999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|.+++    .....+++..+..++.|++.||+|||++
T Consensus        81 E~~~gg~L~~~l----~~~~~l~~~~~~~~~~qi~~aL~~lH~~  120 (363)
T cd05628          81 EFLPGGDMMTLL----MKKDTLTEEETQFYIAETVLAIDSIHQL  120 (363)
T ss_pred             cCCCCCcHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999988    3445689999999999999999999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.85  E-value=2.1e-20  Score=132.72  Aligned_cols=116  Identities=20%  Similarity=0.308  Sum_probs=101.1

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      .++|.+.+.||+|+||.||.|.. .++..+|+|++.....    ....+.+|+.++..++||||+++++.+...+..+++
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   96 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL   96 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence            45799999999999999999996 4688999999865321    234578899999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+.+|+|.+++    .....+++..+..++.|++.||+|||++
T Consensus        97 ~e~~~~~~L~~~l----~~~~~~~~~~~~~~~~qi~~aL~~LH~~  137 (329)
T PTZ00263         97 LEFVVGGELFTHL----RKAGRFPNDVAKFYHAELVLAFEYLHSK  137 (329)
T ss_pred             EcCCCCChHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999988    3445689999999999999999999974

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.85  E-value=1.8e-20  Score=135.47  Aligned_cols=114  Identities=19%  Similarity=0.193  Sum_probs=99.4

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      .|.+++.||+|+||.||++.. .++..+|+|++......    ...+.+|+.++..++||||+++++.+.+.+..+++||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            588999999999999999985 57889999999764321    2347789999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++|+|.+++.    ....+++..+..++.|++.||+|||++
T Consensus        82 ~~~gg~L~~~l~----~~~~~~e~~~~~~~~qi~~aL~~LH~~  120 (381)
T cd05626          82 YIPGGDMMSLLI----RMEVFPEVLARFYIAELTLAIESVHKM  120 (381)
T ss_pred             cCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999883    345689999999999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.84  E-value=3.1e-20  Score=128.09  Aligned_cols=117  Identities=26%  Similarity=0.440  Sum_probs=99.7

Q ss_pred             hcCceeecccccccceEEEEEEec----CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~----~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..+|++.+.||+|+||.||+|...    .+..+|+|.++.....  ...+.+|+..+..++||||+++++.+...+..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            457899999999999999999742    4568999988764332  2357899999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||+++|+|.+++..+   ...+++..++.++.|++.||+|||++
T Consensus        84 v~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~i~~al~~lH~~  126 (266)
T cd05064          84 VTEYMSNGALDSFLRKH---EGQLVAGQLMGMLPGLASGMKYLSEM  126 (266)
T ss_pred             EEEeCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999988432   34689999999999999999999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.84  E-value=3.6e-20  Score=127.15  Aligned_cols=117  Identities=29%  Similarity=0.431  Sum_probs=102.7

Q ss_pred             hcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccC
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      .++|.+.+.||+|+||.||.+....+..+|+|.+.........+.+|+.++..++||||+++++++...+..+++|||+.
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             hHHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            35789999999999999999987666679999988766666778999999999999999999999998888999999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|+|.+++...   ...+++..++.++.|++.||.|||++
T Consensus        83 ~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~  119 (256)
T cd05113          83 NGCLLNYLREH---GKRFQPSQLLEMCKDVCEGMAYLESK  119 (256)
T ss_pred             CCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999988432   23689999999999999999999974

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=3.9e-20  Score=131.48  Aligned_cols=115  Identities=18%  Similarity=0.294  Sum_probs=100.2

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|.+.+.||+|+||.||+|... ++..+|+|++.....    ....+.+|+.++..++||||+++++.+...+..+++|
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            36899999999999999999964 688999999875322    2334778999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|.+++    .....+++..+..++.|++.||.|||++
T Consensus        81 e~~~g~~L~~~l----~~~~~l~~~~~~~~~~qi~~~l~~lH~~  120 (333)
T cd05600          81 EYVPGGDFRTLL----NNLGVLSEDHARFYMAEMFEAVDALHEL  120 (333)
T ss_pred             eCCCCCCHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999998    3445689999999999999999999974

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.84  E-value=3.9e-20  Score=133.74  Aligned_cols=114  Identities=18%  Similarity=0.214  Sum_probs=99.1

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      .|...+.||+|+||.||++.. .++..+|+|.+.....    ....+.+|+.++..++||||+++++.+.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            588999999999999999985 4788999999875322    12347789999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++|+|.+++.    ....+++..+..++.|++.||+|||++
T Consensus        82 ~~~gg~L~~~l~----~~~~~~e~~~~~~~~qi~~al~~lH~~  120 (382)
T cd05625          82 YIPGGDMMSLLI----RMGIFPEDLARFYIAELTCAVESVHKM  120 (382)
T ss_pred             CCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999883    335689999999999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.84  E-value=4.1e-20  Score=131.86  Aligned_cols=120  Identities=23%  Similarity=0.247  Sum_probs=101.6

Q ss_pred             HHhhhcCceeecccccccceEEEEEEec-C-CCEEEEEEccCCC----cCHHHHHHHHHHHhcCCCCcccceeeEEEeCC
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQLH-T-GGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS   98 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~-~-~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   98 (148)
                      .....++|++.+.||+|+||.||.|... + +..+|+|.+....    .....+.+|+.++..++||||+++++.+.+.+
T Consensus        25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~  104 (340)
T PTZ00426         25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES  104 (340)
T ss_pred             CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC
Confidence            3445668999999999999999999843 3 3689999886532    12345778999999999999999999999999


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..+++|||+.+|+|.+++    .....+++..+..++.|++.||.|||++
T Consensus       105 ~~~lv~Ey~~~g~L~~~i----~~~~~~~~~~~~~~~~qi~~aL~~LH~~  150 (340)
T PTZ00426        105 YLYLVLEFVIGGEFFTFL----RRNKRFPNDVGCFYAAQIVLIFEYLQSL  150 (340)
T ss_pred             EEEEEEeCCCCCcHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999998    3445689999999999999999999974

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.84  E-value=1e-20  Score=128.55  Aligned_cols=116  Identities=25%  Similarity=0.341  Sum_probs=102.6

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      .++|+....||.|+||.|...+. .++..+|+|++++...-    .+...+|..+|+.+.||+++++++.+.+.+.++||
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv  122 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV  122 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence            45788999999999999999995 46889999999774432    22367899999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||.+||.|+.++    .+.++++++.+..+++||+.||+|||+.
T Consensus       123 meyv~GGElFS~L----rk~~rF~e~~arFYAAeivlAleylH~~  163 (355)
T KOG0616|consen  123 MEYVPGGELFSYL----RKSGRFSEPHARFYAAEIVLALEYLHSL  163 (355)
T ss_pred             EeccCCccHHHHH----HhcCCCCchhHHHHHHHHHHHHHHHHhc
Confidence            9999999999999    5667899999999999999999999974

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.84  E-value=2.2e-20  Score=134.97  Aligned_cols=117  Identities=22%  Similarity=0.269  Sum_probs=103.8

Q ss_pred             hhcCceeecccccccceEEEEEE-ecCCCEEEEEEccCCCcCHH----HHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~-~~~~~~~avk~~~~~~~~~~----~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|++..+||+|+||.||.|+ ..+|..+|+|+++++.....    ....|-.+|....+|+||+++-.|-+..++||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            45789999999999999999998 56899999999988655332    35677788888899999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||++|||+..+|    .....+++..+..++.+++.||+.||+.
T Consensus       219 iMEylPGGD~mTLL----~~~~~L~e~~arfYiaE~vlAI~~iH~~  260 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLL----MRKDTLTEDWARFYIAETVLAIESIHQL  260 (550)
T ss_pred             EEEecCCccHHHHH----HhcCcCchHHHHHHHHHHHHHHHHHHHc
Confidence            99999999999998    5667899999999999999999999963

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.83  E-value=6.3e-20  Score=126.01  Aligned_cols=120  Identities=23%  Similarity=0.399  Sum_probs=104.7

Q ss_pred             hhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +..++|++.+.||+|++|.||++...++..+++|.+.......+.+.+|+.++..++||||+++++.+...+..++++||
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05072           3 IPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY   82 (261)
T ss_pred             CchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence            45678999999999999999999977778899998876555566788999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++...  ....+++..+..++.|++.||+|||++
T Consensus        83 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~LH~~  122 (261)
T cd05072          83 MAKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIERK  122 (261)
T ss_pred             CCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999988442  234578899999999999999999974

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.83  E-value=9.2e-21  Score=135.85  Aligned_cols=117  Identities=21%  Similarity=0.359  Sum_probs=102.4

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCe-EEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSK-RALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-~~lv~  104 (148)
                      ++|..++++|+|+||.++..+++ +++.+++|.++.....   .+...+|+.++++++||||+.+.+.|..++. .+|+|
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            57888999999999999999864 6778999999775543   3457899999999999999999999988777 99999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||+||++.+.+...  ++..++++.+..++.|++.|+.|||++
T Consensus        84 ~Y~eGg~l~~~i~~~--k~~~f~E~~i~~~~~Q~~~av~ylH~~  125 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQ--KGVLFPEERILKWFVQILLAVNYLHEN  125 (426)
T ss_pred             eecCCCCHHHHHHHH--hhccccHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999988653  357799999999999999999999953

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.83  E-value=8.9e-20  Score=129.75  Aligned_cols=117  Identities=21%  Similarity=0.319  Sum_probs=101.5

Q ss_pred             hhhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      +..++|++.+.||+|+||.||.+... ++..+|+|.+......  ...+.+|+.++..++||||+++++++...+..+++
T Consensus         2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (333)
T cd06650           2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   81 (333)
T ss_pred             cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence            34578999999999999999999864 6888999988654322  34588999999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |||+++|+|.+++.    ....+++..+..++.|++.||.|||+
T Consensus        82 ~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~l~~~l~~lH~  121 (333)
T cd06650          82 MEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE  121 (333)
T ss_pred             EecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999883    34568999999999999999999996

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.83  E-value=1e-19  Score=129.28  Aligned_cols=116  Identities=23%  Similarity=0.309  Sum_probs=101.5

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ..++|++.+.||+|+||.||++.. .++..+|+|.+.....  ....+.+|+.++..++||||+++++.+...+..+++|
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   82 (331)
T cd06649           3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   82 (331)
T ss_pred             CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence            457899999999999999999995 4788899998875432  2345889999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ||+++|+|.+++    .....+++..+..++.|++.||.|||+
T Consensus        83 e~~~~~~L~~~l----~~~~~~~~~~~~~~~~~i~~~l~~lH~  121 (331)
T cd06649          83 EHMDGGSLDQVL----KEAKRIPEEILGKVSIAVLRGLAYLRE  121 (331)
T ss_pred             ecCCCCcHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            999999999988    334568999999999999999999996

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.83  E-value=1.2e-19  Score=127.28  Aligned_cols=121  Identities=27%  Similarity=0.407  Sum_probs=98.8

Q ss_pred             hhcCceeecccccccceEEEEEEec-----------------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCccc
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-----------------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVV   88 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-----------------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~   88 (148)
                      +..+|.+.+.||+|+||.||.|...                 ++..+|+|.+......  ...+.+|+.++..++||||+
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv   82 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNII   82 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCee
Confidence            4568999999999999999999742                 2336999988764322  34588999999999999999


Q ss_pred             ceeeEEEeCCeEEEEEeccCCCChhhcccccC---------------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           89 QLLGFYSEGSKRALVYEYMPNGSLDRHIFPNE---------------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        89 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++++...+..+++|||+.+|+|.+++....               .....+++..++.++.|++.||.|||++
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~  157 (304)
T cd05096          83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL  157 (304)
T ss_pred             EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999999999999999998874321               1123467889999999999999999974

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.83  E-value=1.6e-19  Score=123.96  Aligned_cols=121  Identities=29%  Similarity=0.447  Sum_probs=106.5

Q ss_pred             HhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++..++|.+.+.||+|++|.||++...++..+++|.+........++.+|+..++.++||||+++++.+......+++||
T Consensus         2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (261)
T cd05034           2 EIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE   81 (261)
T ss_pred             ccchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence            35567899999999999999999987667889999998766667789999999999999999999999998889999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++++|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        82 ~~~~~~L~~~i~~~--~~~~~~~~~~~~~~~~i~~al~~lh~~  122 (261)
T cd05034          82 YMSKGSLLDFLKSG--EGKKLRLPQLVDMAAQIAEGMAYLESR  122 (261)
T ss_pred             ccCCCCHHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999988432  234589999999999999999999974

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.83  E-value=1.2e-19  Score=124.68  Aligned_cols=120  Identities=24%  Similarity=0.399  Sum_probs=104.1

Q ss_pred             HhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++..++|++.+.||+|+||.||.+...++..+|+|.+.........+.+|+.+++.++||||+++++.+ ..+..++++|
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e   80 (260)
T cd05067           2 EVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITE   80 (260)
T ss_pred             ccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEE
Confidence            456678999999999999999999977788999999987666677889999999999999999999876 4566899999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+.+++|.+++...  ....+++..+..++.|++.||+|||++
T Consensus        81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~al~~LH~~  121 (260)
T cd05067          81 YMENGSLVDFLKTP--EGIKLTINKLIDMAAQIAEGMAFIERK  121 (260)
T ss_pred             cCCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999987432  234689999999999999999999974

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.83  E-value=1.4e-20  Score=136.28  Aligned_cols=119  Identities=23%  Similarity=0.279  Sum_probs=104.1

Q ss_pred             HhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcC-CCCcccceeeEEEeCCe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRI-HHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~   99 (148)
                      .....+|.+++.||+|+|++|++|+. .+++.+|+|++++.-.-    ....-+|-.+|..| .||+|++++-.|.+...
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s  148 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES  148 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence            44567999999999999999999994 58999999999774332    23356777888888 79999999999999999


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|+|+||+++|+|.++|    .+.+.+++..+..++.||+.||+|||++
T Consensus       149 LYFvLe~A~nGdll~~i----~K~Gsfde~caR~YAAeIldAleylH~~  193 (604)
T KOG0592|consen  149 LYFVLEYAPNGDLLDLI----KKYGSFDETCARFYAAEILDALEYLHSN  193 (604)
T ss_pred             eEEEEEecCCCcHHHHH----HHhCcchHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999    5667899999999999999999999975

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=1e-19  Score=129.37  Aligned_cols=116  Identities=16%  Similarity=0.175  Sum_probs=99.4

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCC----cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|++.+.||+|+||.||.+.. .+++.+|+|++....    .....+.+|..++..++||+|+.+++.+...+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            4789999999999999999995 468899999986421    12334778888999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|.+++..   ....+++..+..++.|++.||+|||++
T Consensus        81 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~  121 (331)
T cd05597          81 DYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVLAIDSVHQL  121 (331)
T ss_pred             ecCCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999998832   234689999999999999999999974

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.83  E-value=1.1e-19  Score=124.91  Aligned_cols=120  Identities=23%  Similarity=0.388  Sum_probs=105.1

Q ss_pred             hhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +..++|++.+.||+|++|.||++...++..+|+|.+.........+.+|+.++..++||||+++++.+...+..+++|||
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068           3 IDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             cchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence            44567999999999999999999976677899999977665667788999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+++|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        83 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~  122 (261)
T cd05068          83 MKYGSLLEYLQGG--AGRALKLPQLIDMAAQVASGMAYLEAQ  122 (261)
T ss_pred             ccCCcHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999988432  234689999999999999999999974

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.83  E-value=1.9e-20  Score=129.11  Aligned_cols=115  Identities=19%  Similarity=0.294  Sum_probs=96.4

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeC--CeEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEG--SKRALV  103 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv  103 (148)
                      +.|+..+.|++|+||.||+|+. +++..||+|.++-...   -.--..+|+.+|.+++||||+.+-++....  +.+|||
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            3577888999999999999995 5899999999865331   122367999999999999999999987653  569999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||++ ||..++.   .-.+++...++..++.|++.|++|||++
T Consensus       156 Me~~Eh-DLksl~d---~m~q~F~~~evK~L~~QlL~glk~lH~~  196 (419)
T KOG0663|consen  156 MEYVEH-DLKSLME---TMKQPFLPGEVKTLMLQLLRGLKHLHDN  196 (419)
T ss_pred             HHHHHh-hHHHHHH---hccCCCchHHHHHHHHHHHHHHHHHhhc
Confidence            999998 9988883   2346789999999999999999999985

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.83  E-value=1.3e-19  Score=130.05  Aligned_cols=115  Identities=19%  Similarity=0.264  Sum_probs=99.7

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|++.+.||+|+||.||.+.. .++..+|+|++.....    ....+.+|+.++..++||+|+++++.+.+.+..++||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4688999999999999999985 4788999999865221    2334678999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|.+++    .....+++..+..++.|++.||+|||++
T Consensus        81 E~~~gg~L~~~l----~~~~~l~~~~~~~~~~qi~~~L~~lH~~  120 (360)
T cd05627          81 EFLPGGDMMTLL----MKKDTLSEEATQFYIAETVLAIDAIHQL  120 (360)
T ss_pred             eCCCCccHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999988    3445689999999999999999999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.83  E-value=1.1e-19  Score=130.71  Aligned_cols=117  Identities=23%  Similarity=0.357  Sum_probs=103.9

Q ss_pred             HhhhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc----CHHHHHHHHHHHhcCC-CCcccceeeEEEeCCe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF----SAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSK   99 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~   99 (148)
                      ......|.+.+.||+|.||.||.|... +|..+|+|.+.+...    +.....+|+.+|++++ ||||+.+.+.|++...
T Consensus        31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~  110 (382)
T KOG0032|consen   31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS  110 (382)
T ss_pred             ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe
Confidence            444567999999999999999999964 699999999977444    2356889999999998 9999999999999999


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      .++|||+|.||.|.+.+...     .+++..+..++.|++.|+.|||+
T Consensus       111 ~~lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~  153 (382)
T KOG0032|consen  111 VYLVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHS  153 (382)
T ss_pred             EEEEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999998432     38999999999999999999997

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.83  E-value=5.9e-20  Score=132.61  Aligned_cols=97  Identities=24%  Similarity=0.376  Sum_probs=80.1

Q ss_pred             HHHHHhhhcCceeecccccccceEEEEEEe------cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcC-CCCcccceee
Q 041447           22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRI-HHVNVVQLLG   92 (148)
Q Consensus        22 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~   92 (148)
                      ..-+....++|.+.+.||+|+||.||+|..      .++..+|+|+++....  ..+.+.+|+.++..+ +||||+++++
T Consensus        27 ~~~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~  106 (375)
T cd05104          27 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLG  106 (375)
T ss_pred             ccccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeee
Confidence            334455667899999999999999999962      2456899999865432  234578999999999 7999999999


Q ss_pred             EEEeCCeEEEEEeccCCCChhhcccc
Q 041447           93 FYSEGSKRALVYEYMPNGSLDRHIFP  118 (148)
Q Consensus        93 ~~~~~~~~~lv~e~~~~g~L~~~l~~  118 (148)
                      .+...+..+++|||+++|+|.+++..
T Consensus       107 ~~~~~~~~~lv~E~~~~g~L~~~l~~  132 (375)
T cd05104         107 ACTVGGPTLVITEYCCYGDLLNFLRR  132 (375)
T ss_pred             eeccCCcceeeehhccCCcHHHHHHh
Confidence            99999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.82  E-value=6.5e-20  Score=130.47  Aligned_cols=123  Identities=24%  Similarity=0.380  Sum_probs=98.5

Q ss_pred             HhhhcCceeecccccccceEEEEEEe------cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCcccceeeEEEe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQLLGFYSE   96 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~~~~~~~   96 (148)
                      .+..++|.+.+.||+|+||.||+|..      .++..+|+|++......  ...+.+|+.++..+ +||||+++++.+..
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   82 (338)
T cd05102           3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK   82 (338)
T ss_pred             ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence            45567899999999999999999973      23567999998754322  34588999999999 89999999998775


Q ss_pred             C-CeEEEEEeccCCCChhhcccccCC------------------------------------------------------
Q 041447           97 G-SKRALVYEYMPNGSLDRHIFPNEG------------------------------------------------------  121 (148)
Q Consensus        97 ~-~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------  121 (148)
                      . +..+++|||+++|+|.+++.....                                                      
T Consensus        83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (338)
T cd05102          83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE  162 (338)
T ss_pred             CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence            4 458899999999999988853211                                                      


Q ss_pred             ----CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          122 ----RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       122 ----~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                          ....+++..+..++.|++.||+|||++
T Consensus       163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~  193 (338)
T cd05102         163 TDDLWKSPLTMEDLICYSFQVARGMEFLASR  193 (338)
T ss_pred             ccccccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence                023478889999999999999999974

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=1.2e-19  Score=129.04  Aligned_cols=120  Identities=21%  Similarity=0.268  Sum_probs=105.1

Q ss_pred             hhhcCceeecccccccceEEEEEE-ecCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~-~~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      ...++|++.+.||.|..++||.|+ ...+..||||+++....  +...+.+|+..|+.++||||++++..|..+..+++|
T Consensus        23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV  102 (516)
T KOG0582|consen   23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV  102 (516)
T ss_pred             CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence            346789999999999999999998 45789999999976433  345688999999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |.||.+|++.+.++..-.  .-+++..+..+.+++++||.|||.+
T Consensus       103 mpfMa~GS~ldIik~~~~--~Gl~E~~Ia~iLre~LkaL~YLH~~  145 (516)
T KOG0582|consen  103 MPFMAGGSLLDIIKTYYP--DGLEEASIATILREVLKALDYLHQN  145 (516)
T ss_pred             ehhhcCCcHHHHHHHHcc--ccccHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999998865322  2389999999999999999999975

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.82  E-value=1.1e-19  Score=133.07  Aligned_cols=114  Identities=20%  Similarity=0.286  Sum_probs=102.5

Q ss_pred             CceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .|.+.+.||+|.|++|..+++. ++..||+|.++++..+.   +.+.+|+++|+.++||||++++++.+.+..+|+||||
T Consensus        57 ~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ey  136 (596)
T KOG0586|consen   57 LYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEY  136 (596)
T ss_pred             ceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEe
Confidence            5889999999999999999964 78999999998866653   3478999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+|.+++++    .+...+.+..+..++.|+..|++|||++
T Consensus       137 a~~ge~~~yl----~~~gr~~e~~ar~~F~q~vsaveYcH~k  174 (596)
T KOG0586|consen  137 ASGGELFDYL----VKHGRMKEKEARAKFRQIVSAVEYCHSK  174 (596)
T ss_pred             ccCchhHHHH----HhcccchhhhhhhhhHHHHHHHHHHhhc
Confidence            9999999999    4455677799999999999999999974

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.82  E-value=1.9e-19  Score=123.44  Aligned_cols=116  Identities=28%  Similarity=0.383  Sum_probs=101.9

Q ss_pred             cCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      .+|.+.+.||+|+||.||.+...++..+++|.+.........+.+|+.++..++||||+++++.+...+..++++||+++
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            46788999999999999999876677899999876655666788999999999999999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|.+++..+   ...+++..+..++.|++.||.|||++
T Consensus        84 ~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~  119 (256)
T cd05059          84 GCLLNYLRER---KGKLGTEWLLDMCSDVCEAMEYLESN  119 (256)
T ss_pred             CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999988432   23689999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.82  E-value=8.5e-20  Score=127.36  Aligned_cols=116  Identities=29%  Similarity=0.410  Sum_probs=97.7

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCC--eEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGS--KRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e  105 (148)
                      .++..++.||+|+||.||.+.. ++|...|+|.+...... .+.+.+|+.+|.+++|||||+++|......  .+++.||
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            3567789999999999999995 45889999998765322 345889999999999999999999755544  6889999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++|+|.+++...   +..+++..+..+++||+.||+|||++
T Consensus        97 y~~~GsL~~~~~~~---g~~l~E~~v~~ytr~iL~GL~ylHs~  136 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRY---GGKLPEPLVRRYTRQILEGLAYLHSK  136 (313)
T ss_pred             ccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999432   22699999999999999999999974

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=1.2e-19  Score=129.64  Aligned_cols=115  Identities=22%  Similarity=0.294  Sum_probs=100.3

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCC----cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|.+.+.||+|+||.||+|... +++.+|+|++....    .....+.+|+.++..++||||+++++.+.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            37899999999999999999964 78999999987532    22345778999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++++|.+++.    ....+++..+..++.|++.||+|||++
T Consensus        81 e~~~~~~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~  120 (350)
T cd05573          81 EYMPGGDLMNLLI----RKDVFPEETARFYIAELVLALDSVHKL  120 (350)
T ss_pred             cCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999883    335689999999999999999999973

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.82  E-value=9.9e-20  Score=124.97  Aligned_cols=119  Identities=24%  Similarity=0.418  Sum_probs=104.2

Q ss_pred             hhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ...+|++.+.||+|+||.||.+...++..+++|.+..... ....+.+|+.++..++||||+++++++...+..+++|||
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            4457899999999999999999977688999999877554 355688999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        84 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~  123 (261)
T cd05148          84 MEKGSLLAFLRSP--EGQVLPVASLIDMACQVAEGMAYLEEQ  123 (261)
T ss_pred             cccCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999998542  245689999999999999999999974

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.82  E-value=1.3e-19  Score=125.46  Aligned_cols=118  Identities=22%  Similarity=0.341  Sum_probs=99.4

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCc-ccceeeEEEeCC------
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVN-VVQLLGFYSEGS------   98 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~------   98 (148)
                      ..|...+.+|+|+||+||+|+. .+|+.||+|.++....   -.....+|+.+++.++|+| |+.+++++.+.+      
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            3567788899999999999994 5789999999977544   3445789999999999999 999999998877      


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++|+||++. ||.+++.......+.++...+..+++|++.||+|||++
T Consensus        91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~  139 (323)
T KOG0594|consen   91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH  139 (323)
T ss_pred             eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            89999999987 99999854332224577899999999999999999975

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.82  E-value=1.9e-19  Score=127.57  Aligned_cols=109  Identities=23%  Similarity=0.297  Sum_probs=94.0

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCC
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNG  110 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g  110 (148)
                      +.||+|+||.||.+.. .+++.+|+|++.....    ....+.+|+.++..++||||+++.+.+...+..+++|||+.+|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            3589999999999985 5788999999875322    1234678999999999999999999999999999999999999


Q ss_pred             ChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          111 SLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       111 ~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|.+++    .....+++..+..++.|++.||+|||++
T Consensus        81 ~L~~~l----~~~~~~~~~~~~~~~~qi~~~L~~lH~~  114 (323)
T cd05571          81 ELFFHL----SRERVFSEDRARFYGAEIVSALGYLHSC  114 (323)
T ss_pred             cHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999888    3445689999999999999999999974

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.82  E-value=4.6e-19  Score=122.04  Aligned_cols=119  Identities=16%  Similarity=0.283  Sum_probs=100.7

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-C---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-S---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|.+.+.||+|+||.||++.. .++..+|+|.+..... .   ...+.+|+.+++.++||||+++++.+...+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            4789999999999999999985 4788999998765322 1   234788999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|.+++.........+++..+..++.|++.||+|||++
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~  125 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR  125 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            99999999887743323345689999999999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.82  E-value=2.3e-19  Score=127.16  Aligned_cols=109  Identities=24%  Similarity=0.314  Sum_probs=93.5

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCC
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNG  110 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g  110 (148)
                      +.||+|+||.||.+.. .++..+|+|++.....    ....+.+|+.++..++||||+++++.+...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            3589999999999985 4788999999865321    2234678999999999999999999999999999999999999


Q ss_pred             ChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          111 SLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       111 ~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|..++    .....+++..++.++.|++.||.|||++
T Consensus        81 ~L~~~l----~~~~~~~~~~~~~~~~qi~~aL~~LH~~  114 (323)
T cd05595          81 ELFFHL----SRERVFTEERARFYGAEIVSALEYLHSR  114 (323)
T ss_pred             cHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            998887    3345689999999999999999999974

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.82  E-value=3.5e-19  Score=122.69  Aligned_cols=118  Identities=27%  Similarity=0.352  Sum_probs=101.7

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ...++|++.+.||+|+||.||++.. .++..+|+|++...... ...+.+|+.++.+++||||+++++.+...+..++++
T Consensus         6 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~   85 (267)
T cd06646           6 NPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM   85 (267)
T ss_pred             CchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence            3456899999999999999999995 57889999998754332 344778999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++++|.+++.    ....+++..+..++.|++.||.|||++
T Consensus        86 e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~  125 (267)
T cd06646          86 EYCGGGSLQDIYH----VTGPLSELQIAYVCRETLQGLAYLHSK  125 (267)
T ss_pred             eCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999883    334689999999999999999999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.82  E-value=1.7e-19  Score=128.04  Aligned_cols=116  Identities=21%  Similarity=0.221  Sum_probs=99.7

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|.+.+.||+|+||.||++.. .++..+|+|+++....    ....+.+|+.++..++||+|+++.+.+...+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            4789999999999999999985 4788999999876332    2234778888999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|.+++...   ...+++..+..++.|++.||.|||++
T Consensus        81 e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~  121 (330)
T cd05601          81 EYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQM  121 (330)
T ss_pred             CCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999988432   25689999999999999999999974

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.82  E-value=2.1e-19  Score=129.57  Aligned_cols=115  Identities=19%  Similarity=0.209  Sum_probs=98.9

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCC----cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      .++|++.+.||+|+||.||.+.. .+++.+|+|.+....    .....+.+|+.++..++||||+++++.+.+.+..++|
T Consensus        42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv  121 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV  121 (370)
T ss_pred             HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence            46799999999999999999996 468899999986422    1233477899999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+++|+|.+++..     ..+++..+..++.|++.||+|||++
T Consensus       122 ~Ey~~gg~L~~~l~~-----~~~~~~~~~~~~~qil~aL~~LH~~  161 (370)
T cd05621         122 MEYMPGGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAIHSM  161 (370)
T ss_pred             EcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999998832     3478999999999999999999974

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.81  E-value=2.7e-19  Score=122.90  Aligned_cols=120  Identities=27%  Similarity=0.427  Sum_probs=102.9

Q ss_pred             HhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++..++|++.+.||+|++|.||.+...++..+++|.+.......+.+.+|+.+++.++||+++++++.+. .+..+++||
T Consensus         2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e   80 (260)
T cd05070           2 EIPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTE   80 (260)
T ss_pred             CCchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEE
Confidence            3456789999999999999999998777778999999876666677899999999999999999998774 456889999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++++|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~  121 (260)
T cd05070          81 YMSKGSLLDFLKDG--EGRALKLPNLVDMAAQVAAGMAYIERM  121 (260)
T ss_pred             ecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999988432  234579999999999999999999974

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.81  E-value=2e-19  Score=130.76  Aligned_cols=96  Identities=26%  Similarity=0.352  Sum_probs=79.5

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCC-CCcccceeeE
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIH-HVNVVQLLGF   93 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~-~~~i~~~~~~   93 (148)
                      .-+..+.++|.+++.||+|+||.||.|...      ++..+|+|.+......  .+.+.+|+.++..+. ||||++++++
T Consensus        30 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~  109 (400)
T cd05105          30 SRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGA  109 (400)
T ss_pred             CceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEE
Confidence            345566778999999999999999999742      2346999999764332  345889999999996 9999999999


Q ss_pred             EEeCCeEEEEEeccCCCChhhcccc
Q 041447           94 YSEGSKRALVYEYMPNGSLDRHIFP  118 (148)
Q Consensus        94 ~~~~~~~~lv~e~~~~g~L~~~l~~  118 (148)
                      +...+..+++||||++|+|.+++..
T Consensus       110 ~~~~~~~~lv~Ey~~~g~L~~~l~~  134 (400)
T cd05105         110 CTKSGPIYIITEYCFYGDLVNYLHK  134 (400)
T ss_pred             EccCCceEEEEEecCCCcHHHHHHH
Confidence            9999999999999999999988743

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.81  E-value=1.4e-19  Score=130.60  Aligned_cols=129  Identities=22%  Similarity=0.362  Sum_probs=103.5

Q ss_pred             cHHHHHHhhhcCceeecccccccceEEEEEEe------cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCcccce
Q 041447           20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQL   90 (148)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~   90 (148)
                      ++.+.+....++|++.+.||+|+||.||.+..      .++..+|+|.+......  ...+.+|+.++..+ +||||+++
T Consensus        28 ~~~~~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~  107 (374)
T cd05106          28 PYNEKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNL  107 (374)
T ss_pred             cccccccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeE
Confidence            34445556677899999999999999999873      13457999999764332  33477899999999 79999999


Q ss_pred             eeEEEeCCeEEEEEeccCCCChhhcccccC--------------------------------------------------
Q 041447           91 LGFYSEGSKRALVYEYMPNGSLDRHIFPNE--------------------------------------------------  120 (148)
Q Consensus        91 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------------------------------------------------  120 (148)
                      ++.+...+..+++|||+++|+|.+++..+.                                                  
T Consensus       108 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (374)
T cd05106         108 LGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPV  187 (374)
T ss_pred             eeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCc
Confidence            999999999999999999999998874321                                                  


Q ss_pred             ----------------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          121 ----------------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       121 ----------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                                      .....+++..++.++.|++.||+|||++
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  231 (374)
T cd05106         188 SSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK  231 (374)
T ss_pred             cccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence                            0113478889999999999999999974

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.81  E-value=2.4e-19  Score=129.24  Aligned_cols=115  Identities=18%  Similarity=0.209  Sum_probs=98.8

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCC----cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      .++|.+.+.||+|+||.||++.. .++..+|+|.+....    .....+.+|+.++..++||||+++++.+.+.+..++|
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv  121 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV  121 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence            45799999999999999999985 478899999986522    1223467899999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+++|+|.+++..     ..+++..+..++.|++.||+|||++
T Consensus       122 ~Ey~~gg~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~~LH~~  161 (370)
T cd05596         122 MEYMPGGDLVNLMSN-----YDIPEKWARFYTAEVVLALDAIHSM  161 (370)
T ss_pred             EcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999998832     3478999999999999999999974

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.81  E-value=3.2e-19  Score=126.08  Aligned_cols=109  Identities=21%  Similarity=0.306  Sum_probs=93.6

Q ss_pred             cccccccceEEEEEEe----cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccC
Q 041447           36 WSSGKDGFGSVYKGQL----HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~----~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      +.||+|+||.||.+..    .++..+|+|++.....   ......+|+.++.+++||||+++++.+...+..++||||+.
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5689999999999873    3678999999875332   23346789999999999999999999999999999999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|+|.+++    .....+++..+..++.|++.||.|||++
T Consensus        82 ~~~L~~~l----~~~~~l~~~~~~~~~~qi~~~l~~lH~~  117 (318)
T cd05582          82 GGDLFTRL----SKEVMFTEEDVKFYLAELALALDHLHSL  117 (318)
T ss_pred             CCcHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999988    3345689999999999999999999974

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.81  E-value=5.4e-19  Score=124.41  Aligned_cols=114  Identities=19%  Similarity=0.275  Sum_probs=98.9

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++|++.+.||+|+||.||++.. .++..+++|.+......  ...+.+|+.++..++||||+++++.+...+..++++||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            3688999999999999999985 46788899987653222  34478899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +++++|.+++.    ....+++..+..++.|++.||.|||+
T Consensus        81 ~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~  117 (308)
T cd06615          81 MDGGSLDQVLK----KAGRIPENILGKISIAVLRGLTYLRE  117 (308)
T ss_pred             cCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999983    34568999999999999999999996

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.81  E-value=2.4e-20  Score=123.37  Aligned_cols=120  Identities=23%  Similarity=0.402  Sum_probs=104.0

Q ss_pred             HhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      ....++|++++.||+|.||.||.|+. .++-.+|+|++.++..    -..++.+|+++-+.++||||++++++|.+....
T Consensus        18 ~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ri   97 (281)
T KOG0580|consen   18 TWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRI   97 (281)
T ss_pred             ccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecccee
Confidence            34457899999999999999999995 5678899999866433    234578999999999999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |+++||...|.+...+..  +....+++...+.++.|++.|+.|||.
T Consensus        98 yLilEya~~gel~k~L~~--~~~~~f~e~~~a~Yi~q~A~Al~y~h~  142 (281)
T KOG0580|consen   98 YLILEYAPRGELYKDLQE--GRMKRFDEQRAATYIKQLANALLYCHL  142 (281)
T ss_pred             EEEEEecCCchHHHHHHh--cccccccccchhHHHHHHHHHHHHhcc
Confidence            999999999999988832  255678999999999999999999996

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.81  E-value=3.3e-19  Score=126.73  Aligned_cols=116  Identities=16%  Similarity=0.168  Sum_probs=98.7

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|.+.+.||+|+||.||.++. .+++.+|+|++.....    ....+..|..++..++|++|+++++.+...+..++||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4789999999999999999985 4688999999865221    2233677888899999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+|+|.+++..   ....+++..+..++.|++.||+|||++
T Consensus        81 Ey~~gg~L~~~l~~---~~~~l~~~~~~~~~~qi~~~L~~lH~~  121 (331)
T cd05624          81 DYYVGGDLLTLLSK---FEDRLPEDMARFYIAEMVLAIHSIHQL  121 (331)
T ss_pred             eCCCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999843   234689999999999999999999974

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.81  E-value=1.4e-19  Score=124.59  Aligned_cols=114  Identities=32%  Similarity=0.547  Sum_probs=94.6

Q ss_pred             eeecccccccceEEEEEEec-----CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           33 DLTWSSGKDGFGSVYKGQLH-----TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        33 ~~~~~lg~g~~~~v~~~~~~-----~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++.+.||.|.||.||+|.+.     .+..|++|.++.....  ...+.+|+..+.+++||||+++++++...+..++++|
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence            56788999999999999854     3568999999653332  4568899999999999999999999998888999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++|+|.+++...  ....+++..++.++.|++.||.|||++
T Consensus        82 ~~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~  122 (259)
T PF07714_consen   82 YCPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHSN  122 (259)
T ss_dssp             --TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccccccccccccc--ccccccccccccccccccccccccccc
Confidence            99999999999543  245689999999999999999999974

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.81  E-value=3.9e-19  Score=126.22  Aligned_cols=109  Identities=23%  Similarity=0.339  Sum_probs=93.9

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCC
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNG  110 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g  110 (148)
                      +.||+|+||.||.+.. .++..+|+|++.....    ....+.+|+.++..++||||+++.+.+...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            3579999999999985 4788999999875322    2345778999999999999999999999999999999999999


Q ss_pred             ChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          111 SLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       111 ~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|.+++    .....+++..+..++.|++.||+|||++
T Consensus        81 ~L~~~l----~~~~~l~~~~~~~~~~qi~~aL~~LH~~  114 (328)
T cd05593          81 ELFFHL----SRERVFSEDRTRFYGAEIVSALDYLHSG  114 (328)
T ss_pred             CHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            998887    3445689999999999999999999974

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=3.2e-19  Score=125.80  Aligned_cols=107  Identities=21%  Similarity=0.269  Sum_probs=92.5

Q ss_pred             cccccceEEEEEEe-cCCCEEEEEEccCCC----cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCCh
Q 041447           38 SGKDGFGSVYKGQL-HTGGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL  112 (148)
Q Consensus        38 lg~g~~~~v~~~~~-~~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L  112 (148)
                      ||+|+||.||++.. .++..+|+|.+....    .....+.+|+.++..++||||+++++.+...+..+++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            69999999999996 468899999986532    1234477899999999999999999999999999999999999999


Q ss_pred             hhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          113 DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       113 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++.    ....+++..+..++.|++.||.|||++
T Consensus        81 ~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~  112 (312)
T cd05585          81 FHHLQ----REGRFDLSRARFYTAELLCALENLHKF  112 (312)
T ss_pred             HHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99883    345689999999999999999999974

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.81  E-value=7.9e-20  Score=135.21  Aligned_cols=113  Identities=24%  Similarity=0.319  Sum_probs=102.0

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      -+++++.||.|+-|.|..|++ .+|+.+|||++.+...    ....+.+|+-+|+-+.|||++.++++|++..++|+|.|
T Consensus        13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE   92 (786)
T KOG0588|consen   13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE   92 (786)
T ss_pred             ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence            368899999999999999995 5899999999977522    23458899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |+++|-|++++    ...+.+++..+.+++.||+.|+.|||.
T Consensus        93 yv~gGELFdyl----v~kG~l~e~eaa~ff~QIi~gv~yCH~  130 (786)
T KOG0588|consen   93 YVPGGELFDYL----VRKGPLPEREAAHFFRQILDGVSYCHA  130 (786)
T ss_pred             ecCCchhHHHH----HhhCCCCCHHHHHHHHHHHHHHHHHhh
Confidence            99999999999    556789999999999999999999995

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.81  E-value=7.2e-19  Score=122.65  Aligned_cols=116  Identities=23%  Similarity=0.326  Sum_probs=98.6

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      .++|.+.+.||+|+||.||+|.. .++..+|+|.++....  ....+.+|+.++..++||||+++++++...+..+++||
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE   83 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence            35799999999999999999985 4788999999865432  23457789999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+.+ +|.+++..   ....+++..+..++.|++.||+|||++
T Consensus        84 ~~~~-~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~  122 (288)
T cd07871          84 YLDS-DLKQYLDN---CGNLMSMHNVKIFMFQLLRGLSYCHKR  122 (288)
T ss_pred             CCCc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9986 89887732   234578999999999999999999974

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=4.4e-19  Score=123.58  Aligned_cols=116  Identities=28%  Similarity=0.334  Sum_probs=97.9

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      +|+..+.||+|+||.||++.. .++..+|+|.+......    ...+.+|+.++..++||||+.+++.+..++..+++||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            478889999999999999985 46889999998653322    2336789999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+.+|+|.+++..  .....+++..+..++.|++.||.|||++
T Consensus        81 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~  121 (285)
T cd05605          81 LMNGGDLKFHIYN--MGNPGFDEERAVFYAAEITCGLEDLHRE  121 (285)
T ss_pred             ccCCCcHHHHHHh--cCcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999887743  1234589999999999999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.81  E-value=5.5e-19  Score=121.64  Aligned_cols=119  Identities=27%  Similarity=0.408  Sum_probs=100.7

Q ss_pred             hhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++..+|.+.+.||+|+||.||.+...+...+++|.+.........+.+|+.++..++||||+++++.+. ....+++|||
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~   81 (262)
T cd05071           3 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY   81 (262)
T ss_pred             CChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence            455679999999999999999998765567999999875555667889999999999999999998764 4567899999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|+|.+++...  ....+++..+..++.|++.||+|||++
T Consensus        82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~  121 (262)
T cd05071          82 MSKGSLLDFLKGE--MGKYLRLPQLVDMAAQIASGMAYVERM  121 (262)
T ss_pred             CCCCcHHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999988432  234578999999999999999999974

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.81  E-value=6.1e-19  Score=122.85  Aligned_cols=116  Identities=27%  Similarity=0.312  Sum_probs=97.9

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      .|+..+.||+|+||.||.+.. .++..+|+|.+......    ...+.+|+.++..++|++|+.+.+.+.+.+..++++|
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            367889999999999999985 57899999998653321    2346789999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++|+|.+++...  ....+++..+..++.|++.||+|||++
T Consensus        81 ~~~~g~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~  121 (285)
T cd05631          81 IMNGGDLKFHIYNM--GNPGFDEQRAIFYAAELCCGLEDLQRE  121 (285)
T ss_pred             ecCCCcHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999998776432  223589999999999999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.81  E-value=8.7e-19  Score=123.00  Aligned_cols=116  Identities=22%  Similarity=0.361  Sum_probs=98.5

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      .++|.+.+.||+|+||.||.|... ++..+|+|++.....  ....+.+|+.+++.++||||+++++++.+....+++||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            367999999999999999999964 788999999875432  23457789999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+. ++|.+++..   ....+++..+..++.|++.||+|||++
T Consensus        84 ~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~  122 (303)
T cd07869          84 YVH-TDLCQYMDK---HPGGLHPENVKLFLFQLLRGLSYIHQR  122 (303)
T ss_pred             CCC-cCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            996 488877732   234588999999999999999999974

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.81  E-value=5.8e-19  Score=122.81  Aligned_cols=115  Identities=19%  Similarity=0.295  Sum_probs=97.2

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++|++.+.||+|+||.||+++.. ++..+|+|++.....   ....+.+|+.++..++||||+++++.+...+..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            36899999999999999999964 688999999875432   23457789999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+.++.+..+.    .....+++..+..++.|++.||.|||++
T Consensus        81 ~~~~~~l~~~~----~~~~~~~~~~~~~~~~qi~~~L~~lH~~  119 (287)
T cd07848          81 YVEKNMLELLE----EMPNGVPPEKVRSYIYQLIKAIHWCHKN  119 (287)
T ss_pred             cCCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99987665544    2334689999999999999999999964

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.80  E-value=6.8e-19  Score=120.94  Aligned_cols=120  Identities=21%  Similarity=0.370  Sum_probs=102.4

Q ss_pred             HhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      +++.++|.+.+.||+|+||.||.+...++..+++|.+.........+.+|+.++..++|+||+++++.+.. ...+++||
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e   80 (260)
T cd05073           2 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE   80 (260)
T ss_pred             cccccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence            46678999999999999999999987667789999887654445668899999999999999999998877 77899999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++++|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~  121 (260)
T cd05073          81 FMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR  121 (260)
T ss_pred             eCCCCcHHHHHHhC--CccccCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999988432  234578889999999999999999974

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.80  E-value=6.5e-19  Score=121.23  Aligned_cols=120  Identities=24%  Similarity=0.371  Sum_probs=103.6

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      +...+|.+.+.||+|++|.||.|.. .++..+++|.+.........+.+|+.++..++||||+++++.+...+..+++||
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (263)
T cd05052           3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   82 (263)
T ss_pred             CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence            3445788999999999999999985 468889999987665556678899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++++|.+++...  ....+++..+..++.|++.||+|||++
T Consensus        83 ~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~  123 (263)
T cd05052          83 FMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK  123 (263)
T ss_pred             eCCCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999988432  234589999999999999999999974

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.80  E-value=6.8e-19  Score=122.32  Aligned_cols=111  Identities=26%  Similarity=0.350  Sum_probs=93.1

Q ss_pred             cccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCCh
Q 041447           38 SGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL  112 (148)
Q Consensus        38 lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L  112 (148)
                      ||+|+||.||.+.. .+++.+|+|.+......    ...+..|+.++..++||+|+++.+.+......+++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            69999999999985 47889999998653322    13467899999999999999999999999999999999999999


Q ss_pred             hhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          113 DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       113 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ...+.........+++..++.++.|++.||+|||++
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~  116 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR  116 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            877643323445689999999999999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.80  E-value=1.1e-18  Score=120.01  Aligned_cols=114  Identities=28%  Similarity=0.413  Sum_probs=98.3

Q ss_pred             CceeecccccccceEEEEEEecCCCEEEEEEccCCCcC-------HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS-------AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~-------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      +|+..+.||+|+||.||++...++..+|+|.+......       ...+.+|++.++.++|+||+++.+.+...+..+++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            46788899999999999998777889999988654321       12377899999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||+++++|.+++.    ....+++..+..++.|++.||+|||++
T Consensus        81 ~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~  121 (265)
T cd06631          81 MEFVPGGSISSILN----RFGPLPEPVFCKYTKQILDGVAYLHNN  121 (265)
T ss_pred             EecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999983    334688999999999999999999974

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.80  E-value=5.3e-19  Score=127.49  Aligned_cols=116  Identities=19%  Similarity=0.205  Sum_probs=99.2

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|.+.+.||+|+||.||.+.. .+++.+|+|++.....    ....+.+|+.++..++||||+++++.+...+..++
T Consensus        41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (371)
T cd05622          41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM  120 (371)
T ss_pred             chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            346899999999999999999996 4788999999864221    22346788899999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||+++|+|.+++..     ..+++..+..++.|++.||+|||++
T Consensus       121 v~Ey~~gg~L~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~  161 (371)
T cd05622         121 VMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM  161 (371)
T ss_pred             EEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999998832     3478999999999999999999974

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=1.4e-19  Score=131.51  Aligned_cols=114  Identities=25%  Similarity=0.380  Sum_probs=101.8

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHH-HHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVE-FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~-~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      ..|.....+|+|+.|.||.+.. .++..||+|.++......++ ..+|+.+|+..+|+||+.+++.|...+.+++||||+
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym  352 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM  352 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence            4577788899999999999984 57889999999886665555 789999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||+|.+.+     ....+++.++..+.++++.||.|||.+
T Consensus       353 ~ggsLTDvV-----t~~~~~E~qIA~Icre~l~aL~fLH~~  388 (550)
T KOG0578|consen  353 EGGSLTDVV-----TKTRMTEGQIAAICREILQGLKFLHAR  388 (550)
T ss_pred             CCCchhhhh-----hcccccHHHHHHHHHHHHHHHHHHHhc
Confidence            999999988     334589999999999999999999974

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.80  E-value=6.1e-19  Score=126.41  Aligned_cols=115  Identities=25%  Similarity=0.378  Sum_probs=96.9

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---------------HHHHHHHHHHHhcCCCCcccceee
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---------------AVEFINEVSTIGRIHHVNVVQLLG   92 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---------------~~~~~~e~~~l~~l~~~~i~~~~~   92 (148)
                      .+.|++...||+|.||.|-.|+. .+++.+|+|++.+....               -+...+|+.+|+++.|||||++++
T Consensus        96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE  175 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE  175 (576)
T ss_pred             hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence            35799999999999999999995 57899999999763221               135789999999999999999999


Q ss_pred             EEEe--CCeEEEEEeccCCCChhhcccccCCCCCC-CCHHHHHHHHHHHHHHHhhhhcC
Q 041447           93 FYSE--GSKRALVYEYMPNGSLDRHIFPNEGRGKS-FSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        93 ~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +..+  .+.+|||+|||..|.+...-     ...+ +++.+++.|+++++.||+|||.|
T Consensus       176 vLDDP~s~~~YlVley~s~G~v~w~p-----~d~~els~~~Ar~ylrDvv~GLEYLH~Q  229 (576)
T KOG0585|consen  176 VLDDPESDKLYLVLEYCSKGEVKWCP-----PDKPELSEQQARKYLRDVVLGLEYLHYQ  229 (576)
T ss_pred             eecCcccCceEEEEEeccCCccccCC-----CCcccccHHHHHHHHHHHHHHHHHHHhc
Confidence            9876  46799999999998876543     3334 89999999999999999999975

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.80  E-value=5.9e-19  Score=125.34  Aligned_cols=109  Identities=18%  Similarity=0.253  Sum_probs=92.9

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||.+.. .++..+|+|+++....    ....+.+|..++..+ +||||+++++++...+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            3589999999999985 4788999999975322    123467888888888 699999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|.+++    .....+++..+..++.|++.||.|||++
T Consensus        81 g~L~~~~----~~~~~l~~~~~~~~~~qi~~~l~~lH~~  115 (329)
T cd05588          81 GDLMFHM----QRQRKLPEEHARFYSAEISLALNFLHER  115 (329)
T ss_pred             CCHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9998887    3445689999999999999999999974

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.80  E-value=1.6e-18  Score=119.26  Aligned_cols=119  Identities=19%  Similarity=0.324  Sum_probs=101.8

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|++.+.||+|++|.||++... ++..+++|.+.....    ....+.+|+.++.+++|++++++++.+...+..+++|
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            47899999999999999999964 789999998864221    2345889999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++++|.+++.........+++..+..++.|++.||.|||++
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~  125 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK  125 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999988754333345689999999999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.80  E-value=1.1e-18  Score=121.79  Aligned_cols=115  Identities=26%  Similarity=0.396  Sum_probs=100.1

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|.+.+.||+|++|.||.+.. .+++.+|+|.+.....    ....+.+|+.+++.++||||+++++.+...+..+++|
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            3689999999999999999985 4688999998865322    2344788999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++++|.+++    .....+++..+..++.|++.||.|||++
T Consensus        81 e~~~~~~L~~~~----~~~~~l~~~~~~~~~~qil~~l~~lH~~  120 (290)
T cd05580          81 EYVPGGELFSHL----RKSGRFPEPVARFYAAQVVLALEYLHSL  120 (290)
T ss_pred             ecCCCCCHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999988    3446789999999999999999999974

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PHA02988 hypothetical protein; Provisional

Probab=99.80  E-value=7.6e-19  Score=122.40  Aligned_cols=119  Identities=18%  Similarity=0.325  Sum_probs=97.4

Q ss_pred             HHHhhhcCceee--cccccccceEEEEEEecCCCEEEEEEccCCCcCH----HHHHHHHHHHhcCCCCcccceeeEEEe-
Q 041447           24 LRKLLDSGLDLT--WSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSA----VEFINEVSTIGRIHHVNVVQLLGFYSE-   96 (148)
Q Consensus        24 ~~~~~~~~~~~~--~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~~~~~~~~-   96 (148)
                      +..+..++++..  ..+++|+++.||+|... |..+|+|.+.......    +.+.+|+.+|.+++||||+++++++.+ 
T Consensus        12 ~~~i~~~~i~~~~~~~i~~g~~~~v~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~   90 (283)
T PHA02988         12 IKCIESDDIDKYTSVLIKENDQNSIYKGIFN-NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI   90 (283)
T ss_pred             ceecCHHHcCCCCCeEEeeCCceEEEEEEEC-CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec
Confidence            333344444444  67899999999999884 8899999997754433    446799999999999999999999876 


Q ss_pred             ---CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           97 ---GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        97 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                         ....+++|||+.+|+|.+++.    ..+.+++.....++.|++.||.|||+
T Consensus        91 ~~~~~~~~lv~Ey~~~g~L~~~l~----~~~~~~~~~~~~i~~~i~~~l~~lH~  140 (283)
T PHA02988         91 VDDLPRLSLILEYCTRGYLREVLD----KEKDLSFKTKLDMAIDCCKGLYNLYK  140 (283)
T ss_pred             ccCCCceEEEEEeCCCCcHHHHHh----hCCCCChhHHHHHHHHHHHHHHHHHh
Confidence               456889999999999999983    34568899999999999999999996

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.80  E-value=1e-18  Score=123.87  Aligned_cols=114  Identities=23%  Similarity=0.238  Sum_probs=95.8

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCC----cCHHHHHHHHHHHhcCCC-CcccceeeEEEeCCeEEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN----FSAVEFINEVSTIGRIHH-VNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~  104 (148)
                      +|.+.+.||+|+||.||+|.. .+++.+|+|++....    .....+..|..++..++| ++|+.+++.+...+..+++|
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            578899999999999999985 467899999986532    223456788888888875 56888999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|.+++    .....+++..+..++.|++.||+|||++
T Consensus        81 E~~~~g~L~~~~----~~~~~~~~~~~~~~~~qi~~al~~lH~~  120 (324)
T cd05587          81 EYVNGGDLMYHI----QQVGKFKEPHAVFYAAEIAIGLFFLHSK  120 (324)
T ss_pred             cCCCCCcHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999888    3345689999999999999999999974

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=5.2e-19  Score=122.65  Aligned_cols=118  Identities=22%  Similarity=0.352  Sum_probs=101.4

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      +.++|.+.+.||+|++|.||++.. .++..+++|.+..... ....+.+|+.++..++||||+++++.+..+...+++||
T Consensus         3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd06611           3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE   82 (280)
T ss_pred             chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence            345789999999999999999985 4688999999865433 23457889999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++++|.+++..   ....+++..+..++.|++.||.|||++
T Consensus        83 ~~~~~~L~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lh~~  122 (280)
T cd06611          83 FCDGGALDSIMLE---LERGLTEPQIRYVCRQMLEALNFLHSH  122 (280)
T ss_pred             ccCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999988732   234689999999999999999999974

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.80  E-value=6.6e-19  Score=128.11  Aligned_cols=99  Identities=26%  Similarity=0.431  Sum_probs=82.3

Q ss_pred             cHHHHHHhhhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCC-CCcccce
Q 041447           20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIH-HVNVVQL   90 (148)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~-~~~i~~~   90 (148)
                      +++.-+++..++|.+.+.||+|+||.||+|+..      .+..+|+|+++.....  ...+.+|+.++..+. ||||+++
T Consensus        27 ~~~~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~  106 (401)
T cd05107          27 PYDSAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNL  106 (401)
T ss_pred             CCCCcceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEE
Confidence            344447777788999999999999999999842      3458999999764332  235789999999997 9999999


Q ss_pred             eeEEEeCCeEEEEEeccCCCChhhcccc
Q 041447           91 LGFYSEGSKRALVYEYMPNGSLDRHIFP  118 (148)
Q Consensus        91 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~  118 (148)
                      ++.+...+..++|+||+++|+|.+++..
T Consensus       107 ~~~~~~~~~~~iv~E~~~~g~L~~~l~~  134 (401)
T cd05107         107 LGACTKGGPIYIITEYCRYGDLVDYLHR  134 (401)
T ss_pred             EEEEccCCCcEEEEeccCCCcHHHHHHh
Confidence            9999998999999999999999998854

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.80  E-value=2e-18  Score=118.14  Aligned_cols=116  Identities=30%  Similarity=0.485  Sum_probs=102.1

Q ss_pred             cCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      .+|++.+.||+|+||.||++....+..+++|.+.........+.+|+.+++.++||+++++++.+......++++||+.+
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   83 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH   83 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence            47889999999999999999876677899999877666667788999999999999999999999998999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|.+++..   ....+++..+..++.|++.|++|||++
T Consensus        84 ~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~  119 (256)
T cd05112          84 GCLSDYLRA---QRGKFSQETLLGMCLDVCEGMAYLESS  119 (256)
T ss_pred             CcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999988843   234578999999999999999999964

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.80  E-value=1.1e-18  Score=123.69  Aligned_cols=109  Identities=25%  Similarity=0.375  Sum_probs=92.8

Q ss_pred             cccccccceEEEEEEe----cCCCEEEEEEccCCCc-----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           36 WSSGKDGFGSVYKGQL----HTGGLIAVKMLENSNF-----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~----~~~~~~avk~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +.||+|+||.||.+..    .+++.+|+|++.....     ....+.+|+.++..++||||+++++.+...+..+++|||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5789999999999974    3578999999865321     223467899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+|+|.+++    .....+++..+..++.|++.||.|||++
T Consensus        82 ~~~~~L~~~~----~~~~~~~~~~~~~~~~qi~~~l~~lH~~  119 (323)
T cd05584          82 LSGGELFMHL----EREGIFMEDTACFYLSEISLALEHLHQQ  119 (323)
T ss_pred             CCCchHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999988    3345678999999999999999999974

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.80  E-value=1.5e-19  Score=132.39  Aligned_cols=125  Identities=25%  Similarity=0.359  Sum_probs=107.1

Q ss_pred             HHHHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCC
Q 041447           21 YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGS   98 (148)
Q Consensus        21 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   98 (148)
                      ...+.+.+++.+.+++.||+|.||.|..|....+..||+|.++.....  ..+|.+|+.+|.+++||||+.++++|..++
T Consensus       529 ~~al~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De  608 (807)
T KOG1094|consen  529 GPALVEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD  608 (807)
T ss_pred             CcchhhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC
Confidence            345677888899999999999999999999776789999999874433  467999999999999999999999999999


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      .+++++||++.|||.+|+..+..+.  ........++.||+.||+||.+
T Consensus       609 PicmI~EYmEnGDLnqFl~aheapt--~~t~~~vsi~tqiasgmaYLes  655 (807)
T KOG1094|consen  609 PLCMITEYMENGDLNQFLSAHELPT--AETAPGVSICTQIASGMAYLES  655 (807)
T ss_pred             chHHHHHHHhcCcHHHHHHhccCcc--cccchhHHHHHHHHHHHHHHHh
Confidence            9999999999999999996553222  4556677899999999999853

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.80  E-value=1.2e-18  Score=123.52  Aligned_cols=108  Identities=23%  Similarity=0.309  Sum_probs=92.9

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCC
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNG  110 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g  110 (148)
                      +.||+|+||.||.+.. .++..+|+|++.....    ....+.+|+.++..++||||+++.+.+...+..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            3589999999999985 4788999999875322    2234678889999999999999999999999999999999999


Q ss_pred             ChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          111 SLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       111 ~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +|..++    .....+++..+..++.|++.||.|||+
T Consensus        81 ~L~~~l----~~~~~l~~~~~~~~~~qi~~aL~~lH~  113 (325)
T cd05594          81 ELFFHL----SRERVFSEDRARFYGAEIVSALDYLHS  113 (325)
T ss_pred             cHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999887    344568999999999999999999995

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.80  E-value=1e-18  Score=120.37  Aligned_cols=116  Identities=25%  Similarity=0.351  Sum_probs=100.4

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .++|.+.+.||+|+||.||.+.. .++..+|+|.++..... ...+.+|+.++..++||||+++++.+...+..++++||
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~   87 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF   87 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence            45788889999999999999985 46889999998764332 33477899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++    .....+++..+..++.|++.||.|||++
T Consensus        88 ~~~~~L~~~~----~~~~~~~~~~~~~~~~~i~~~l~~lH~~  125 (267)
T cd06645          88 CGGGSLQDIY----HVTGPLSESQIAYVSRETLQGLYYLHSK  125 (267)
T ss_pred             cCCCcHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999988    3345689999999999999999999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.80  E-value=2.1e-18  Score=118.81  Aligned_cols=117  Identities=29%  Similarity=0.487  Sum_probs=99.2

Q ss_pred             hcCceeecccccccceEEEEEEec----CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~----~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      .++|++.+.||+|+||.||+|...    +...+++|.+......  ...+.+|+..+..++||||+++++.+...+..++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i   82 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI   82 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence            357899999999999999999853    2457899988654332  3457889999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||+++++|.+++..+   ...+++..+..++.|++.||+|||++
T Consensus        83 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~  125 (266)
T cd05033          83 ITEYMENGSLDKFLREN---DGKFTVGQLVGMLRGIASGMKYLSEM  125 (266)
T ss_pred             EEEcCCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999988432   24689999999999999999999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.79  E-value=1.2e-18  Score=129.29  Aligned_cols=118  Identities=14%  Similarity=0.152  Sum_probs=98.7

Q ss_pred             CceeecccccccceEEEEEEec-C-CCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLH-T-GGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~-~-~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .|.+.+.||+|++|.||.+... + +..+++|.+...... ...+.+|+.++..++||||+++++.+...+..++||||+
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            4899999999999999999853 3 667888876543332 234678999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|+|.+++........++++..+..++.|++.||.|||++
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~  188 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR  188 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999987754323445689999999999999999999974

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.79  E-value=1.8e-19  Score=132.09  Aligned_cols=121  Identities=26%  Similarity=0.438  Sum_probs=105.8

Q ss_pred             HHHHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeC
Q 041447           21 YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEG   97 (148)
Q Consensus        21 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~   97 (148)
                      +.+.|+++.+.+.+...||+|.||+||+|++.  ..||||.++-.....   +.|.+|+.++++-+|.||+-+.|++..+
T Consensus       383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p  460 (678)
T KOG0193|consen  383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP  460 (678)
T ss_pred             cccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence            44788888889999999999999999999974  369999997765543   4588999999999999999999999888


Q ss_pred             CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +. +||+.+|+|.+|..+++..   ...+.......|+.||+.||.|||.
T Consensus       461 ~~-AIiTqwCeGsSLY~hlHv~---etkfdm~~~idIAqQiaqGM~YLHA  506 (678)
T KOG0193|consen  461 PL-AIITQWCEGSSLYTHLHVQ---ETKFDMNTTIDIAQQIAQGMDYLHA  506 (678)
T ss_pred             ce-eeeehhccCchhhhhccch---hhhhhHHHHHHHHHHHHHhhhhhhh
Confidence            77 9999999999999999543   3568899999999999999999995

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.79  E-value=1.3e-18  Score=120.89  Aligned_cols=120  Identities=24%  Similarity=0.312  Sum_probs=99.3

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcC-CCCcccceeeEEE-----eCCeEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYS-----EGSKRA  101 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~-----~~~~~~  101 (148)
                      .++|++.+.||+|+||.||++.. .++..+++|.+.........+.+|+.++..+ +||||+++++.+.     ..+..+
T Consensus        17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~   96 (286)
T cd06638          17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLW   96 (286)
T ss_pred             ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEE
Confidence            45889999999999999999985 4688999998876444455678899999998 6999999999874     345689


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|||+++++|.+++.........+++..+..++.|++.||.|||++
T Consensus        97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  143 (286)
T cd06638          97 LVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN  143 (286)
T ss_pred             EEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999987743323445689999999999999999999964

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.79  E-value=2.2e-20  Score=127.85  Aligned_cols=116  Identities=28%  Similarity=0.411  Sum_probs=103.3

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +.+-|.+.+.||+|+||.||++.+ .+|..+|+|.+.. ..+.+++..|+.+|+++..|++++++|.|.....++|||||
T Consensus        31 PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY  109 (502)
T KOG0574|consen   31 PEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY  109 (502)
T ss_pred             hHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc-cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence            334567889999999999999985 4799999998865 45677899999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |..|++.+.++   ...+++++..+..+++..++||+|||.
T Consensus       110 CGAGSiSDI~R---~R~K~L~E~EIs~iL~~TLKGL~YLH~  147 (502)
T KOG0574|consen  110 CGAGSISDIMR---ARRKPLSEQEISAVLRDTLKGLQYLHD  147 (502)
T ss_pred             cCCCcHHHHHH---HhcCCccHHHHHHHHHHHHhHHHHHHH
Confidence            99999999884   456789999999999999999999995

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.79  E-value=1.4e-18  Score=123.59  Aligned_cols=116  Identities=16%  Similarity=0.168  Sum_probs=98.3

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|++.+.||+|+||.||.+... ++..+|+|++.....    ....+..|..++..++|++|+.+++.+.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            47899999999999999999854 678899999864211    2233678888899999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+|+|.+++..   ....+++..+..++.|++.||.|||++
T Consensus        81 ey~~~g~L~~~l~~---~~~~l~~~~~~~~~~qi~~al~~lH~~  121 (332)
T cd05623          81 DYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVIAIDSVHQL  121 (332)
T ss_pred             eccCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999842   234689999999999999999999974

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=9.2e-19  Score=129.79  Aligned_cols=118  Identities=24%  Similarity=0.353  Sum_probs=100.8

Q ss_pred             HhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcC-CCCcccceeeEEEeCCe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~   99 (148)
                      ....++|.+..+||+|.||+|+.+.. .++..+|||++++...    +.+....|-+++... +||+++.++..|-+.++
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            45567899999999999999999995 4788999999987433    345577787777766 59999999999999999


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++||||+.|||+..+.     ..+.+++..+..|+++|+.||.|||++
T Consensus       444 l~fvmey~~Ggdm~~~~-----~~~~F~e~rarfyaAev~l~L~fLH~~  487 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHHI-----HTDVFSEPRARFYAAEVVLGLQFLHEN  487 (694)
T ss_pred             EEEEEEecCCCcEEEEE-----ecccccHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999965544     346699999999999999999999985

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.79  E-value=1.8e-18  Score=122.83  Aligned_cols=114  Identities=20%  Similarity=0.321  Sum_probs=96.8

Q ss_pred             CceeecccccccceEEEEEEe----cCCCEEEEEEccCCCc-----CHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL----HTGGLIAVKMLENSNF-----SAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~----~~~~~~avk~~~~~~~-----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~  100 (148)
                      +|++.+.||+|+||.||.++.    .++..+|+|++.....     ....+..|+.++..++ ||+|+.+++.+...+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            478899999999999999874    3678999999865221     2334678899999994 99999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|||+.+|+|.+++.    ....+++..+..++.|++.||.|||++
T Consensus        81 ~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~  124 (332)
T cd05614          81 HLILDYVSGGEMFTHLY----QRDNFSEDEVRFYSGEIILALEHLHKL  124 (332)
T ss_pred             EEEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999999883    345689999999999999999999974

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.79  E-value=1.4e-18  Score=135.83  Aligned_cols=120  Identities=17%  Similarity=0.261  Sum_probs=100.8

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEe--CCeEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSE--GSKRA  101 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~  101 (148)
                      ...+|.+.+.||+|+||.||++.. .++..+++|.+......   ...+..|+.++..++||||+++++.+..  ...++
T Consensus        11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly   90 (1021)
T PTZ00266         11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY   90 (1021)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence            345899999999999999999995 46778999998764433   3457889999999999999999998854  45689


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |||||+++|+|.+++.........+++..++.++.||+.||.|||+
T Consensus        91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs  136 (1021)
T PTZ00266         91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHN  136 (1021)
T ss_pred             EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999885432334568999999999999999999996

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.79  E-value=2e-18  Score=118.59  Aligned_cols=119  Identities=24%  Similarity=0.382  Sum_probs=100.2

Q ss_pred             hhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++.++|.+...||+|++|.||++....+..+++|.+.........+.+|+.++..++||+++++++.+. .+..+++|||
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~   81 (260)
T cd05069           3 IPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF   81 (260)
T ss_pred             CChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence            445678999999999999999998765667999988765555667889999999999999999998775 4568899999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+++|.+++...  ....+++..+..++.|++.||+|||++
T Consensus        82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~  121 (260)
T cd05069          82 MGKGSLLDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIERM  121 (260)
T ss_pred             CCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999988432  234578999999999999999999974

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.79  E-value=1.5e-18  Score=120.02  Aligned_cols=120  Identities=25%  Similarity=0.393  Sum_probs=99.7

Q ss_pred             hcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      .++|.....||+|+||.||.|+..      +...+++|.+......  ...+.+|+.++..++||||+++++.+......
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   83 (275)
T cd05046           4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH   83 (275)
T ss_pred             hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence            467889999999999999999842      3467899988654332  35688999999999999999999999888899


Q ss_pred             EEEEeccCCCChhhcccccCCC-----CCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGR-----GKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|||+++|+|.+++......     ...+++..+..++.|++.||.|||++
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~  136 (275)
T cd05046          84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA  136 (275)
T ss_pred             eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc
Confidence            9999999999999988432211     12689999999999999999999974

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.79  E-value=1.2e-18  Score=119.95  Aligned_cols=114  Identities=25%  Similarity=0.363  Sum_probs=98.2

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-------CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-------SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      +|+..+.||+|++|.||.+.. .++..+++|.+.....       ....+.+|+.++..++||||+++++.+...+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            467788999999999999984 5788999999865332       12357889999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||+.+++|.+++.    ....+++..+..++.|++.||.|||++
T Consensus        81 v~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~ql~~al~~LH~~  122 (268)
T cd06630          81 FVEWMAGGSVSHLLS----KYGAFKEAVIINYTEQLLRGLSYLHEN  122 (268)
T ss_pred             EEeccCCCcHHHHHH----HhCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999883    345688999999999999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.79  E-value=1.2e-18  Score=119.34  Aligned_cols=118  Identities=32%  Similarity=0.465  Sum_probs=102.7

Q ss_pred             hhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      ..++|++.+.+|+|++|.||.+... ++.+++|.+.........+.+|+.++..++|+||+++++.+.+.+..+++|||+
T Consensus         4 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   82 (256)
T cd05039           4 NSKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM   82 (256)
T ss_pred             ChhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence            4567899999999999999999865 788999999775544567889999999999999999999999889999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        83 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lh~~  121 (256)
T cd05039          83 AKGSLVDYLRSR--GRAVITLAQQLGFALDVCEGMEYLEEK  121 (256)
T ss_pred             CCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999988432  223689999999999999999999974

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.79  E-value=2e-18  Score=122.36  Aligned_cols=112  Identities=25%  Similarity=0.367  Sum_probs=92.7

Q ss_pred             ceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHH---hcCCCCcccceeeEEEeCCeEEEE
Q 041447           32 LDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTI---GRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l---~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      |.+.+.||+|+||.||.+.. .++..+|+|.+.....    ....+.+|..++   ..++||||+++++++...+..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            57789999999999999985 4788999999875321    223455565544   566899999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+++|+|...+.     ...+++..+..++.|++.||.|||++
T Consensus        81 ~E~~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~al~~lH~~  120 (324)
T cd05589          81 MEYAAGGDLMMHIH-----TDVFSEPRAVFYAACVVLGLQYLHEN  120 (324)
T ss_pred             EcCCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999988772     24589999999999999999999974

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.79  E-value=1.5e-18  Score=124.33  Aligned_cols=112  Identities=27%  Similarity=0.349  Sum_probs=95.1

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      .++|+..+.||+|+||.||++.. .+++.+|+|++......  ...+.+|+.++..++|+||+++++.+...+..+++||
T Consensus        73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  152 (353)
T PLN00034         73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE  152 (353)
T ss_pred             HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence            34677889999999999999985 47889999998653322  3458899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+.+|+|....        ..++..+..++.|++.||+|||++
T Consensus       153 ~~~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~  187 (353)
T PLN00034        153 FMDGGSLEGTH--------IADEQFLADVARQILSGIAYLHRR  187 (353)
T ss_pred             cCCCCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999986533        246778889999999999999974

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.79  E-value=1.3e-18  Score=119.86  Aligned_cols=119  Identities=18%  Similarity=0.314  Sum_probs=100.7

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|++.+.||+|++|.||++.. .++..+++|.+.....    ....+.+|+.++..++||||+++++.+...+..++++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            4688899999999999999985 5788999998765322    1235778999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++++|.+++.........+++..++.++.|++.||.|||++
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~  125 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR  125 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999988743223345689999999999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.79  E-value=2.1e-19  Score=133.57  Aligned_cols=116  Identities=23%  Similarity=0.401  Sum_probs=98.6

Q ss_pred             ceeecccccccceEEEEEE-ecCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCC------eEEE
Q 041447           32 LDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGS------KRAL  102 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~-~~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------~~~l  102 (148)
                      +...+.||+|+||.||+++ ..+|..+|+|.++....  ..+.+.+|+++|++++|||||+++++-++..      ...+
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            3456889999999999999 56899999999987332  4556889999999999999999999866543      5789


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||||.+|||...+...+ +..-+++...+.+..+++.||.|||++
T Consensus        95 vmEyC~gGsL~~~L~~PE-N~~GLpE~e~l~lL~d~~~al~~LrEn  139 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSPE-NAYGLPESEFLDLLSDLVSALRHLREN  139 (732)
T ss_pred             EEeecCCCcHHHHhcCcc-cccCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999999996654 334589999999999999999999975

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.79  E-value=2.4e-18  Score=117.65  Aligned_cols=110  Identities=24%  Similarity=0.407  Sum_probs=93.9

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCCh
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL  112 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L  112 (148)
                      +.||+|+||.||++.. .+++.+|+|.+.....  ....+.+|+.++..++||||+++++++......+++|||+.+++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            3689999999999985 4788999998765332  234588999999999999999999999999999999999999999


Q ss_pred             hhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          113 DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       113 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++..   ....+++..++.++.|++.||.|||++
T Consensus        81 ~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~  113 (252)
T cd05084          81 LTFLRT---EGPRLKVKELIQMVENAAAGMEYLESK  113 (252)
T ss_pred             HHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            998832   234588999999999999999999974

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.79  E-value=2.4e-18  Score=122.04  Aligned_cols=113  Identities=17%  Similarity=0.219  Sum_probs=95.0

Q ss_pred             eecccccc--cceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           34 LTWSSGKD--GFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        34 ~~~~lg~g--~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      +.++||+|  +|+.||.+.. .++..+|+|.++.....   ...+.+|+.+++.++||||+++++.+..++..++|+||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            46788999  6789999985 57899999999764332   234678999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|+|.+++..+.  ...+++..++.++.|++.||+|||++
T Consensus        82 ~~~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~  120 (327)
T cd08227          82 AYGSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIHHM  120 (327)
T ss_pred             CCCcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999884321  23488999999999999999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.79  E-value=8.7e-19  Score=120.18  Aligned_cols=114  Identities=25%  Similarity=0.336  Sum_probs=99.7

Q ss_pred             CceeecccccccceEEEEEEec-CCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      +|++.+.||+|+||.||.+... ++..+++|.+.....    ....+.+|+.++.+++||||+++++.+......++++|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            4789999999999999999864 688999999875332    23458889999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+.+++|.+++    .....+++..+..++.|++.||.|||++
T Consensus        81 ~~~~~~L~~~l----~~~~~l~~~~~~~~~~~i~~~l~~lh~~  119 (258)
T cd05578          81 LLLGGDLRYHL----SQKVKFSEEQVKFWICEIVLALEYLHSK  119 (258)
T ss_pred             CCCCCCHHHHH----HhcCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999988    3335789999999999999999999974

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.79  E-value=2.6e-18  Score=118.44  Aligned_cols=117  Identities=29%  Similarity=0.463  Sum_probs=98.2

Q ss_pred             hcCceeecccccccceEEEEEEec-C---CCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-T---GGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~---~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..+|++.+.||+|+||.||.|... +   +..+++|.+......  ...+.+|+.++..++||||+++++.+...+..++
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   82 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI   82 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            357889999999999999999742 2   336899988654332  3458889999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||+++++|.+++..   ....+++..+..++.|++.||+|||++
T Consensus        83 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~  125 (267)
T cd05066          83 VTEYMENGSLDAFLRK---HDGQFTVIQLVGMLRGIASGMKYLSDM  125 (267)
T ss_pred             EEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999998843   234579999999999999999999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.79  E-value=2e-18  Score=121.98  Aligned_cols=109  Identities=23%  Similarity=0.298  Sum_probs=90.8

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCC----cCHHHHHHHHHHHhc-CCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN----FSAVEFINEVSTIGR-IHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~----~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||+|.. .++..+|+|.+....    ........|..++.. ++||||+++++.+.+.+..+++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            3589999999999996 467899999987632    223345667777765 4899999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|.+++    .....+++..+..++.|++.||.|||++
T Consensus        81 g~L~~~l----~~~~~~~~~~~~~~~~qi~~al~~LH~~  115 (316)
T cd05619          81 GDLMFHI----QSCHKFDLPRATFYAAEIICGLQFLHSK  115 (316)
T ss_pred             CcHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999988    3335688999999999999999999974

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.79  E-value=2.4e-18  Score=122.25  Aligned_cols=113  Identities=19%  Similarity=0.306  Sum_probs=94.2

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeC-----CeEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEG-----SKRA  101 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~  101 (148)
                      +|++.+.||+|+||.||.|.. .++..+|+|.+.....   ....+.+|+.++..++||||+++++++...     ...+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            478899999999999999995 4788999999865322   234578999999999999999999987543     3489


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|||+. ++|.+++    .....+++..+..++.|++.||.|||++
T Consensus        81 lv~e~~~-~~L~~~l----~~~~~~~~~~~~~i~~qi~~aL~~LH~~  122 (338)
T cd07859          81 VVFELME-SDLHQVI----KANDDLTPEHHQFFLYQLLRALKYIHTA  122 (338)
T ss_pred             EEEecCC-CCHHHHH----HhcccCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999996 5898888    3445689999999999999999999974

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.78  E-value=6.6e-19  Score=120.60  Aligned_cols=113  Identities=32%  Similarity=0.558  Sum_probs=98.6

Q ss_pred             ceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHH---HHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           32 LDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~---~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      |++++.||+|+||.||++... ++..+|+|.+.........   ..+|+..+..++||||+++.+++......+++||++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            678999999999999999964 5668999999876554333   345899999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++|.+++.    ....+++..++.++.|++.||.+||++
T Consensus        81 ~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~Lh~~  117 (260)
T PF00069_consen   81 PGGSLQDYLQ----KNKPLSEEEILKIAYQILEALAYLHSK  117 (260)
T ss_dssp             TTEBHHHHHH----HHSSBBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccccccccc----ccccccccccccccccccccccccccc
Confidence            9999999883    446689999999999999999999974

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.78  E-value=2.4e-18  Score=121.96  Aligned_cols=114  Identities=22%  Similarity=0.239  Sum_probs=95.2

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCC----cCHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN----FSAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      +|++.+.||+|+||.||.+.. .+++.+|+|++....    .....+..|..++..+. |++|+++.+.+.+.+..++||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            467889999999999999985 478899999986532    12234667888887775 678889999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|.+++    .....+++..+..++.|++.||.|||++
T Consensus        81 Ey~~~g~L~~~i----~~~~~l~~~~~~~i~~qi~~al~~lH~~  120 (323)
T cd05615          81 EYVNGGDLMYHI----QQVGKFKEPQAVFYAAEISVGLFFLHRR  120 (323)
T ss_pred             cCCCCCcHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999888    3445689999999999999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.78  E-value=8.5e-19  Score=136.28  Aligned_cols=125  Identities=27%  Similarity=0.474  Sum_probs=103.9

Q ss_pred             HHHhhhcCceeecccccccceEEEEEEec--CCC----EEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEE
Q 041447           24 LRKLLDSGLDLTWSSGKDGFGSVYKGQLH--TGG----LIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYS   95 (148)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~--~~~----~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~   95 (148)
                      +.++..+..++...||+|+||.||.|...  ++.    .||+|.++....  ...+|.+|..+|+.+.||||++++|++.
T Consensus       686 lp~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l  765 (1025)
T KOG1095|consen  686 LPEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL  765 (1025)
T ss_pred             cccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeec
Confidence            44456678899999999999999999843  343    378888876433  3445999999999999999999999999


Q ss_pred             eCCeEEEEEeccCCCChhhcccccCC---CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           96 EGSKRALVYEYMPNGSLDRHIFPNEG---RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        96 ~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +....+|++|||+||||..|++..+.   ....++..+.+.++.|||+|+.||+++
T Consensus       766 ~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~  821 (1025)
T KOG1095|consen  766 DSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK  821 (1025)
T ss_pred             CCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC
Confidence            99999999999999999999965421   145588999999999999999999863

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.78  E-value=2.8e-18  Score=121.46  Aligned_cols=109  Identities=22%  Similarity=0.282  Sum_probs=91.3

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||+|.. .++..+|+|++.....    ....+..|..++..+ +||+|+++++.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            3589999999999985 4688999999875321    223466788887765 799999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|...+    .....+++..+..++.|++.||.|||++
T Consensus        81 ~~L~~~l----~~~~~~~~~~~~~~~~qi~~aL~~LH~~  115 (321)
T cd05591          81 GDLMFQI----QRSRKFDEPRSRFYAAEVTLALMFLHRH  115 (321)
T ss_pred             CcHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999888    3345689999999999999999999974

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.78  E-value=2.9e-18  Score=121.82  Aligned_cols=109  Identities=20%  Similarity=0.267  Sum_probs=91.7

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||++.. .++..+|+|++.....    ....+.+|..++..+ +||||+++++++...+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            3689999999999995 4688999999875322    223466788887766 799999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|..++    .....+++..+..++.|++.||.|||++
T Consensus        81 ~~L~~~~----~~~~~l~~~~~~~i~~qi~~~l~~lH~~  115 (329)
T cd05618          81 GDLMFHM----QRQRKLPEEHARFYSAEISLALNYLHER  115 (329)
T ss_pred             CCHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9998887    3345689999999999999999999974

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.78  E-value=3.9e-18  Score=119.23  Aligned_cols=114  Identities=25%  Similarity=0.429  Sum_probs=97.4

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC------HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS------AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      +|++.+.||+|++|.||+|.. .++..+++|.+......      ...+..|+.++..++|+||+++++.+.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            477888999999999999985 46889999998764332      23467899999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+ +|+|.+++..+   ...+++..+..++.|++.||.|||++
T Consensus        81 ~e~~-~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~al~~lH~~  121 (298)
T cd07841          81 FEFM-ETDLEKVIKDK---SIVLTPADIKSYMLMTLRGLEYLHSN  121 (298)
T ss_pred             Eccc-CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999 88999988432   13689999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=4e-18  Score=117.07  Aligned_cols=115  Identities=23%  Similarity=0.333  Sum_probs=99.1

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC------HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS------AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ++|.+.+.||+|++|.||.+.. .++..+++|.+......      ...+.+|+.++.+++||||+++++.+......++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            4688999999999999999985 46889999988654322      2347789999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||+++++|.+++    .....+++..+..++.|++.||.|||++
T Consensus        82 v~e~~~~~~l~~~~----~~~~~~~~~~~~~~~~~l~~~l~~lH~~  123 (263)
T cd06625          82 FMEYMPGGSVKDQL----KAYGALTETVTRKYTRQILEGVEYLHSN  123 (263)
T ss_pred             EEEECCCCcHHHHH----HHhCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999988    3345688999999999999999999964

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.78  E-value=5.1e-18  Score=116.03  Aligned_cols=116  Identities=21%  Similarity=0.363  Sum_probs=99.9

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +|.+.+.||+|++|.||++.. .++..+++|.+.....   ....+.+|+.+++.++|||++++++.+...+..++++||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            478889999999999999985 4688999999865432   244578899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++...  ....+++..++.++.|++.||.|||++
T Consensus        81 ~~~~~L~~~l~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~  120 (256)
T cd08529          81 AENGDLHKLLKMQ--RGRPLPEDQVWRFFIQILLGLAHLHSK  120 (256)
T ss_pred             CCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999988542  235689999999999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.78  E-value=6.3e-18  Score=118.97  Aligned_cols=115  Identities=23%  Similarity=0.343  Sum_probs=97.6

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++|.+.+.||+|+||.||++.. .++..+|+|.++....  ....+.+|+.++..++||||+++++.+...+..+++|||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            5799999999999999999985 4688899999875332  233577899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+ +|.+++..   ....++...+..++.|++.||+|||++
T Consensus        86 ~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~lH~~  123 (309)
T cd07872          86 LDK-DLKQYMDD---CGNIMSMHNVKIFLYQILRGLAYCHRR  123 (309)
T ss_pred             CCC-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            986 88877632   234578999999999999999999974

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.78  E-value=8.4e-18  Score=115.11  Aligned_cols=116  Identities=19%  Similarity=0.274  Sum_probs=99.0

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      +|++.+.||+|+||.||.+.. .++..+++|.++....  ..+.+.+|+.++..++||||+++.+.+.+.+..++++||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            478899999999999999985 4788999998865322  3345778999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|+|.+++..  .....+++..+..++.|++.||.|||++
T Consensus        81 ~~~~l~~~~~~--~~~~~~~~~~~~~~~~~i~~al~~lH~~  119 (255)
T cd08219          81 DGGDLMQKIKL--QRGKLFPEDTILQWFVQMCLGVQHIHEK  119 (255)
T ss_pred             CCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            99999887743  2344578999999999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=4e-19  Score=129.01  Aligned_cols=114  Identities=23%  Similarity=0.319  Sum_probs=102.0

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      -|.+.+.||+|.|+.|-.+++ -+|..||||++++...+.   ..+.+|+++|+-++||||++++++..++..+|++.|.
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL   98 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL   98 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence            478889999999999999985 479999999999876653   3478999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      =.+|||++||..+.   .-+.+..+..|++||+.|+.|||.
T Consensus        99 GD~GDl~DyImKHe---~Gl~E~La~kYF~QI~~AI~YCHq  136 (864)
T KOG4717|consen   99 GDGGDLFDYIMKHE---EGLNEDLAKKYFAQIVHAISYCHQ  136 (864)
T ss_pred             cCCchHHHHHHhhh---ccccHHHHHHHHHHHHHHHHHHhh
Confidence            99999999996554   448999999999999999999995

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.78  E-value=3.4e-18  Score=120.85  Aligned_cols=109  Identities=23%  Similarity=0.292  Sum_probs=89.4

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhc-CCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGR-IHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||++.. .++..+|+|.+.....    .......|..++.. .+||||+++++.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3589999999999985 4688999999865321    22334556666654 4799999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|..++.    ....+++..+..++.|++.||+|||++
T Consensus        81 g~L~~~~~----~~~~~~~~~~~~~~~qi~~al~~LH~~  115 (316)
T cd05592          81 GDLMFHIQ----SSGRFDEARARFYAAEIICGLQFLHKK  115 (316)
T ss_pred             CcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99998883    345689999999999999999999974

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.78  E-value=3.1e-18  Score=121.14  Aligned_cols=109  Identities=27%  Similarity=0.335  Sum_probs=91.8

Q ss_pred             cccccccceEEEEEEec-CCCEEEEEEccCCC----cCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQLH-TGGLIAVKMLENSN----FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||.+... ++..+|+|++....    .....+.+|..++..+ +||||+++++.+...+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            35899999999999864 68899999987532    1233466788888777 699999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|..++    .....+++..+..++.|++.||.|||++
T Consensus        81 ~~L~~~~----~~~~~l~~~~~~~~~~qi~~~l~~LH~~  115 (318)
T cd05570          81 GDLMFHI----QRSGRFDEPRARFYAAEIVLGLQFLHER  115 (318)
T ss_pred             CCHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999887    3345689999999999999999999974

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.78  E-value=2.9e-18  Score=121.40  Aligned_cols=109  Identities=24%  Similarity=0.332  Sum_probs=91.5

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCC----cCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN----FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||++.. .+++.+|+|++....    .....+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            3589999999999985 468899999986532    1233466788887766 699999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|.+++    .....+++..+..++.|++.||+|||++
T Consensus        81 g~L~~~i----~~~~~l~~~~~~~~~~ql~~~L~~lH~~  115 (320)
T cd05590          81 GDLMFHI----QKSRRFDEARARFYAAEITSALMFLHDK  115 (320)
T ss_pred             chHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999888    3345689999999999999999999974

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.78  E-value=2.5e-18  Score=121.79  Aligned_cols=109  Identities=26%  Similarity=0.346  Sum_probs=90.1

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHH-HHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVS-TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||++.. .++..+|+|++.....    ....+..|.. ++..++||||+++++.+...+..+++|||+.+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            3589999999999996 4788999999865322    1223445544 45778999999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|..++    .....+++..+..++.|++.||.|||++
T Consensus        81 g~L~~~l----~~~~~~~~~~~~~~~~qi~~~l~~lH~~  115 (323)
T cd05575          81 GELFFHL----QRERSFPEPRARFYAAEIASALGYLHSL  115 (323)
T ss_pred             CCHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999888    3445689999999999999999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.78  E-value=2.8e-18  Score=118.89  Aligned_cols=120  Identities=26%  Similarity=0.476  Sum_probs=100.7

Q ss_pred             hcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      .++|.+.+.||+|+||.||+|...      ++..+|+|.+......  ...+.+|+.++..++||||+++++.+......
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   83 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP   83 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence            456888999999999999999742      3468999998764443  34688999999999999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccC----------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNE----------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|||+++++|.+++....          .....+++..+..++.|++.|+.|||++
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~  141 (280)
T cd05049          84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ  141 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC
Confidence            99999999999999885431          1234578999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.78  E-value=6.6e-18  Score=117.29  Aligned_cols=115  Identities=19%  Similarity=0.329  Sum_probs=98.4

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++|++...||+|++|.||++... +++.+|+|.+.....   ..+.+.+|+.++..++|||++++++.+......+++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            36889999999999999999864 688999998865332   23457789999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |++++++..++    .....+++..+..++.|++.||.|||++
T Consensus        81 ~~~~~~l~~~~----~~~~~~~~~~~~~~~~ql~~~l~~LH~~  119 (286)
T cd07847          81 YCDHTVLNELE----KNPRGVPEHLIKKIIWQTLQAVNFCHKH  119 (286)
T ss_pred             ccCccHHHHHH----hCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99998887766    3344689999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=8e-18  Score=115.44  Aligned_cols=117  Identities=27%  Similarity=0.368  Sum_probs=101.4

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .++|++.+.+|+|++|.||.+.. .++..+++|.+..... ....+.+|+.++..++||||+++++.+...+..+++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            46789999999999999999985 4678899999876443 345688999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+++|.+++..   ....+++..+..++.|++.||.|||++
T Consensus        82 ~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lh~~  120 (262)
T cd06613          82 CGGGSLQDIYQV---TRGPLSELQIAYVCRETLKGLAYLHET  120 (262)
T ss_pred             CCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999998732   225689999999999999999999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.78  E-value=4.1e-18  Score=120.68  Aligned_cols=114  Identities=22%  Similarity=0.246  Sum_probs=94.9

Q ss_pred             CceeecccccccceEEEEEEec-CCCEEEEEEccCCCc----CHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF----SAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      +|.+.+.||+|+||.||++... ++..+|+|++.....    .......|..++..+ .||+|+.+.+.+...+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            5788999999999999999854 678999999875322    122356677777766 5899999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|.+++    .....+++..+..++.|++.||+|||++
T Consensus        81 E~~~~g~L~~~~----~~~~~~~~~~~~~~~~qi~~aL~~LH~~  120 (323)
T cd05616          81 EYVNGGDLMYQI----QQVGRFKEPHAVFYAAEIAIGLFFLHSK  120 (323)
T ss_pred             cCCCCCCHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999888    3345689999999999999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.78  E-value=8.5e-18  Score=115.08  Aligned_cols=116  Identities=18%  Similarity=0.294  Sum_probs=99.9

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +|+..+.+|+|+||.|+.++. .++..+++|.+......   ...+.+|+.++++++|+||+++++.+...+..++++||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            478899999999999999984 56889999988764332   34578999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~  120 (256)
T cd08221          81 ANGGTLYDKIVRQ--KGQLFEEEMVLWYLFQIVSAVSYIHKA  120 (256)
T ss_pred             cCCCcHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999988432  235689999999999999999999964

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.78  E-value=3.1e-18  Score=119.12  Aligned_cols=115  Identities=24%  Similarity=0.357  Sum_probs=99.8

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      .++|++.+.||+|+||.||.+.. .++..+++|++.....  ....+.+|++++..++||||+++++.+...+..++++|
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME   83 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence            45788899999999999999985 4688899998765332  24568899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |+++++|.+++    ...+.+++..+..++.|++.||.|||+
T Consensus        84 ~~~~~~L~~~~----~~~~~~~~~~~~~~~~~i~~~l~~LH~  121 (284)
T cd06620          84 FMDCGSLDRIY----KKGGPIPVEILGKIAVAVVEGLTYLYN  121 (284)
T ss_pred             cCCCCCHHHHH----HhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999887    334568999999999999999999995

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.78  E-value=4.5e-18  Score=130.63  Aligned_cols=115  Identities=20%  Similarity=0.262  Sum_probs=100.0

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|.+.+.||+|+||.||.|... +++.+|+|++......    ...+.+|+.++..++||||+++++.+...+..++||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            57899999999999999999964 7889999998754322    245778899999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+++|.+++.    ....+++..++.++.||+.||+|||++
T Consensus        84 Ey~~g~~L~~li~----~~~~l~~~~~~~i~~qil~aL~yLH~~  123 (669)
T cd05610          84 EYLIGGDVKSLLH----IYGYFDEEMAVKYISEVALALDYLHRH  123 (669)
T ss_pred             eCCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999883    345688999999999999999999974

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.78  E-value=4.9e-18  Score=116.16  Aligned_cols=114  Identities=27%  Similarity=0.390  Sum_probs=97.8

Q ss_pred             CceeecccccccceEEEEEEec-CCCEEEEEEccCCCc------CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF------SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      +|...+.||+|++|.||+|... ++..+++|.+.....      ....+.+|+.++..++||||+++.+.+......+++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            3667788999999999999864 788999998865332      123578899999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||+++++|.+++    .....+++..+..++.|++.||.|||++
T Consensus        81 ~e~~~~~~L~~~~----~~~~~~~~~~~~~~~~~i~~~l~~lH~~  121 (258)
T cd06632          81 LELVPGGSLAKLL----KKYGSFPEPVIRLYTRQILLGLEYLHDR  121 (258)
T ss_pred             EEecCCCcHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999988    3344588999999999999999999964

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.78  E-value=7.6e-18  Score=118.09  Aligned_cols=116  Identities=24%  Similarity=0.348  Sum_probs=98.5

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      .++|.+.+.||+|+||.||++.. .++..+|+|.+.....  ....+.+|+..+..++||||+++++++...+..++++|
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e   84 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE   84 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence            35789999999999999999985 4688999999865332  23457789999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+.+ +|.+++..   ....+++..+..++.|++.||+|||++
T Consensus        85 ~~~~-~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~lH~~  123 (301)
T cd07873          85 YLDK-DLKQYLDD---CGNSINMHNVKLFLFQLLRGLNYCHRR  123 (301)
T ss_pred             cccc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9975 88887732   234578999999999999999999974

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.78  E-value=4e-18  Score=118.83  Aligned_cols=123  Identities=27%  Similarity=0.404  Sum_probs=99.2

Q ss_pred             HhhhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeC
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEG   97 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   97 (148)
                      +...++|++.+.||+|+||.||+|...      .+..+|+|.+......  ...+.+|+..+..++||||+++++.+..+
T Consensus         2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   81 (288)
T cd05061           2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG   81 (288)
T ss_pred             cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            445678999999999999999998632      2457999988654332  23477899999999999999999999999


Q ss_pred             CeEEEEEeccCCCChhhcccccCC------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEG------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +..+++|||+++|+|.+++.....      .....+...+..++.|++.||.|||++
T Consensus        82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~  138 (288)
T cd05061          82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK  138 (288)
T ss_pred             CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999853211      123356778899999999999999974

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.78  E-value=3.3e-18  Score=118.02  Aligned_cols=116  Identities=28%  Similarity=0.491  Sum_probs=98.0

Q ss_pred             cCceeecccccccceEEEEEEec-CC---CEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TG---GLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~---~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      .+|++.+.||+|+||.||+|... ++   ..+++|.+.....  ....+..|+..+..++||||+++++.+...+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            46889999999999999999853 33   3699998875322  234588999999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+.+++|.+++..   ....+++.++..++.|++.||+|||++
T Consensus        84 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~l~~al~~lH~~  125 (269)
T cd05065          84 TEFMENGALDSFLRQ---NDGQFTVIQLVGMLRGIAAGMKYLSEM  125 (269)
T ss_pred             EecCCCCcHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999998843   234589999999999999999999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.78  E-value=3.9e-18  Score=120.89  Aligned_cols=109  Identities=25%  Similarity=0.306  Sum_probs=90.1

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHH-HHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVS-TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||.+.. .++..+|+|++.....    ....+..|.. ++..++||||+++++.+...+..+++|||+.+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            3589999999999985 4788999999865321    1233445554 46778999999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|..++    .....+++..+..++.||+.||+|||++
T Consensus        81 ~~L~~~l----~~~~~~~~~~~~~~~~qi~~al~~lH~~  115 (325)
T cd05604          81 GELFFHL----QRERSFPEPRARFYAAEIASALGYLHSI  115 (325)
T ss_pred             CCHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9998887    3445689999999999999999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.78  E-value=3.9e-19  Score=113.91  Aligned_cols=114  Identities=20%  Similarity=0.330  Sum_probs=98.3

Q ss_pred             CceeecccccccceEEEEEE-ecCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~-~~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .|...+.||+|.+|+|++++ +.++..||+|.++....+   .....+|+-+++.++|.||+++++....+..+.+|.||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            45567788999999999998 567899999998764432   45688999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |.+ +|..+..   ...+.++...+..++.|++.||.|||++
T Consensus        83 cdq-dlkkyfd---slng~~d~~~~rsfmlqllrgl~fchsh  120 (292)
T KOG0662|consen   83 CDQ-DLKKYFD---SLNGDLDPEIVRSFMLQLLRGLGFCHSH  120 (292)
T ss_pred             hhH-HHHHHHH---hcCCcCCHHHHHHHHHHHHhhhhhhhhh
Confidence            987 8887763   4456789999999999999999999975

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.78  E-value=6.2e-18  Score=117.81  Aligned_cols=115  Identities=29%  Similarity=0.336  Sum_probs=97.1

Q ss_pred             ceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           32 LDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      |...+.||+|+||.||.+.. .+++.+|+|.+......    ...+.+|+.++..++|++|+.+.+.+...+..++++||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            56778899999999999985 47889999998654322    23367899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+++|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~  121 (285)
T cd05632          82 MNGGDLKFHIYNM--GNPGFEEERALFYAAEILCGLEDLHRE  121 (285)
T ss_pred             ccCccHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999998877432  234589999999999999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.78  E-value=5.2e-18  Score=119.19  Aligned_cols=115  Identities=17%  Similarity=0.215  Sum_probs=99.3

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|++.+.+|+|+||.||++.. .+++.+++|.+.....    ....+.+|+.++..++||||+++++.+..++..+++|
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            3688999999999999999985 4678999998876432    1234678999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++++|.+++    .....+++..+..++.|++.||.|||++
T Consensus        81 e~~~g~~L~~~l----~~~~~~~~~~~~~~~~~i~~~l~~lH~~  120 (305)
T cd05609          81 EYVEGGDCATLL----KNIGALPVDMARMYFAETVLALEYLHNY  120 (305)
T ss_pred             ecCCCCcHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999998    3345689999999999999999999974

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.78  E-value=2.7e-18  Score=119.26  Aligned_cols=115  Identities=21%  Similarity=0.338  Sum_probs=98.3

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++|++.+.||+|+||.||+|... +++.+|+|.+......   ...+.+|+.++..++||||+++++.+..++..++++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            36889999999999999999964 6889999988653322   3457789999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+.+++|..+.    .....+++..+..++.|++.||+|||++
T Consensus        81 ~~~~~~l~~~~----~~~~~~~~~~~~~~~~~i~~~l~~LH~~  119 (286)
T cd07846          81 FVDHTVLDDLE----KYPNGLDESRVRKYLFQILRGIEFCHSH  119 (286)
T ss_pred             cCCccHHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99998888766    2334589999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.78  E-value=1.1e-17  Score=116.23  Aligned_cols=116  Identities=22%  Similarity=0.350  Sum_probs=97.8

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +|.+.+.||+|++|.||++.. .++..+|+|.+......   ...+.+|+.++..++||||+++++.+..++..++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            578899999999999999985 47889999998653322   34577899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +. ++|.+++... .....+++..++.++.|++.||.|||++
T Consensus        81 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH~~  120 (285)
T cd07861          81 LS-MDLKKYLDSL-PKGQYMDAELVKSYLYQILQGILFCHSR  120 (285)
T ss_pred             CC-CCHHHHHhcC-CCCCcCCHHHHHHHHHHHHHHHHHHHhC
Confidence            97 4888777432 2235689999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.78  E-value=5.9e-18  Score=122.86  Aligned_cols=110  Identities=15%  Similarity=0.198  Sum_probs=95.5

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      ..+|.+.+.||+|+||.||.|.. .+++.+|+|...     ...+.+|+.++..++||||+++++.+......++++|++
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~  165 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY  165 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence            35799999999999999999985 578899999653     234678999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      . ++|..++    .....+++..++.++.|++.||+|||++
T Consensus       166 ~-~~L~~~l----~~~~~l~~~~~~~i~~qi~~aL~ylH~~  201 (391)
T PHA03212        166 K-TDLYCYL----AAKRNIAICDILAIERSVLRAIQYLHEN  201 (391)
T ss_pred             C-CCHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            6 5888877    3345689999999999999999999974

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.78  E-value=3.8e-18  Score=120.72  Aligned_cols=109  Identities=26%  Similarity=0.342  Sum_probs=89.8

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHH-HHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVS-TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||+++. .++..+|+|++.....    ....+..|.. ++..++||||+++++.+.+.+..+++|||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999999996 4688999999865322    1223445544 57788999999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|...+    .....+++..+..++.|++.||.|||++
T Consensus        81 ~~L~~~l----~~~~~~~~~~~~~~~~qi~~~L~~lH~~  115 (321)
T cd05603          81 GELFFHL----QRERCFLEPRARFYAAEVASAIGYLHSL  115 (321)
T ss_pred             CCHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9998877    3445688999999999999999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.77  E-value=4.1e-18  Score=120.43  Aligned_cols=109  Identities=22%  Similarity=0.263  Sum_probs=90.8

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCC----cCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN----FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||.+.. .++..+|+|.++...    ........|..++... +||+|+++++.+...+..++||||+.+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            3689999999999996 478899999987532    1233456677777654 899999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|..++    .....+++..+..++.|++.||+|||++
T Consensus        81 g~L~~~i----~~~~~~~~~~~~~~~~qi~~~l~~lH~~  115 (316)
T cd05620          81 GDLMFHI----QDKGRFDLYRATFYAAEIVCGLQFLHSK  115 (316)
T ss_pred             CcHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999888    3345689999999999999999999974

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.77  E-value=8.6e-18  Score=115.06  Aligned_cols=116  Identities=20%  Similarity=0.288  Sum_probs=99.1

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +|++.+.||+|+||.+|.+.. .+++.+++|.+.....   ....+.+|+.+++.++||||+++.+.+...+..++++||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            478899999999999999985 4788999999865332   234688999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+++|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        81 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~  120 (256)
T cd08218          81 CEGGDLYKKINAQ--RGVLFPEDQILDWFVQICLALKHVHDR  120 (256)
T ss_pred             CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999887432  233578999999999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.77  E-value=4.4e-21  Score=127.78  Aligned_cols=117  Identities=21%  Similarity=0.279  Sum_probs=101.8

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      ..+.|.+.+.||+|.|+.|++|.+ .+|+.+|+|+++....   +.+++.+|+++...++||||+++.+.+......|+|
T Consensus         9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv   88 (355)
T KOG0033|consen    9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   88 (355)
T ss_pred             cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence            345788899999999999999984 5899999999876443   456688999999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .|++.|++|+.-+.    .....++..+..++.||+.||+|||+|
T Consensus        89 Fe~m~G~dl~~eIV----~R~~ySEa~aSH~~rQiLeal~yCH~n  129 (355)
T KOG0033|consen   89 FDLVTGGELFEDIV----AREFYSEADASHCIQQILEALAYCHSN  129 (355)
T ss_pred             EecccchHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999987662    235578999999999999999999975

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=7.1e-18  Score=116.29  Aligned_cols=120  Identities=25%  Similarity=0.380  Sum_probs=101.7

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcC-CCCcccceeeEEEeCC------eE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGS------KR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~------~~  100 (148)
                      .++|++.+.||+|++|.||.+.. .++..+++|.+.........+.+|+.++..+ .||||+++++.+....      ..
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL   84 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence            35899999999999999999996 4678899999887665566788999999998 6999999999987644      48


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|||+++++|.+++.........+++..+..++.|++.||.|||++
T Consensus        85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~  132 (275)
T cd06608          85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN  132 (275)
T ss_pred             EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999988743222346789999999999999999999974

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.77  E-value=4.1e-18  Score=119.79  Aligned_cols=123  Identities=26%  Similarity=0.386  Sum_probs=100.1

Q ss_pred             HhhhcCceeecccccccceEEEEEEec--------CCCEEEEEEccCCCc--CHHHHHHHHHHHhcC-CCCcccceeeEE
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH--------TGGLIAVKMLENSNF--SAVEFINEVSTIGRI-HHVNVVQLLGFY   94 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~--------~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~~~   94 (148)
                      ++..++|.+.+.||+|+||.||.+...        +...+|+|.+.....  ....+..|+.++..+ +||||+++++.+
T Consensus        14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (307)
T cd05098          14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC   93 (307)
T ss_pred             eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence            344567999999999999999999732        234699998876432  234577899999999 799999999999


Q ss_pred             EeCCeEEEEEeccCCCChhhcccccCC------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           95 SEGSKRALVYEYMPNGSLDRHIFPNEG------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        95 ~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ...+..+++|||+.+|+|.+++.....            ....+++..+..++.|++.||+|||++
T Consensus        94 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~  159 (307)
T cd05098          94 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK  159 (307)
T ss_pred             ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999999999854321            123588999999999999999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.77  E-value=4.2e-18  Score=120.89  Aligned_cols=109  Identities=19%  Similarity=0.241  Sum_probs=92.4

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||.+.. .++..+|+|++......    ...+.+|..++..+ +||+|+.+++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            3689999999999985 46789999999763221    23467888888887 599999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|..++    .....+++..+..++.|++.||+|||++
T Consensus        81 ~~L~~~~----~~~~~l~~~~~~~~~~qi~~al~~lH~~  115 (327)
T cd05617          81 GDLMFHM----QRQRKLPEEHARFYAAEICIALNFLHER  115 (327)
T ss_pred             CcHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9998887    3445689999999999999999999974

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.77  E-value=5.4e-18  Score=117.07  Aligned_cols=114  Identities=26%  Similarity=0.374  Sum_probs=96.5

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC-----------HHHHHHHHHHHhcCCCCcccceeeEEEeCC
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS-----------AVEFINEVSTIGRIHHVNVVQLLGFYSEGS   98 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~-----------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   98 (148)
                      +|...+.||+|++|.||.|.. .++..+|+|.+......           .+.+.+|+.++..++|||++++++.+...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            467788999999999999985 46889999987542111           123677899999999999999999999999


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..++++||+.+++|.+++.    ....+++..+..++.|++.||.|||++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~lH~~  127 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLR----TYGRFEEQLVRFFTEQVLEGLAYLHSK  127 (272)
T ss_pred             ceEEEEecCCCCcHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            9999999999999999883    335689999999999999999999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.77  E-value=6.6e-18  Score=125.86  Aligned_cols=122  Identities=16%  Similarity=0.186  Sum_probs=100.9

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeCC----
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEGS----   98 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----   98 (148)
                      ....+|.+.+.||+|+||.||.+.. .++..+|+|.+.......   ..+.+|+..+..++|+|++++++.+....    
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            3456899999999999999999985 578999999997654432   34778999999999999999887765432    


Q ss_pred             ----eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 ----KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                          ..+++|||+++|+|.+++.........+++..+..++.|++.||.|||++
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~  162 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK  162 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence                36899999999999998865434456789999999999999999999974

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.77  E-value=7.7e-18  Score=117.38  Aligned_cols=116  Identities=28%  Similarity=0.319  Sum_probs=97.4

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      .|+..+.||+|+||.||.+.. .+++.+|+|.+......    ...+.+|+.++..++|++++.+.+.+.+.+..+++||
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence            367788899999999999985 47889999988653322    2236689999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++++|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        81 ~~~g~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~  121 (285)
T cd05630          81 LMNGGDLKFHIYHM--GEAGFEEGRAVFYAAEICCGLEDLHQE  121 (285)
T ss_pred             ecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999887432  234589999999999999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.77  E-value=8.4e-18  Score=115.45  Aligned_cols=114  Identities=25%  Similarity=0.381  Sum_probs=99.8

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +|++.+.||+|+||.||++.. .++..+++|.+......   ...+.+|+.++..++|+||+++++.....+..++++||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            478889999999999999985 46889999998775543   34588999999999999999999999989999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++    .....+++..+..++.|++.||.|||++
T Consensus        81 ~~~~~L~~~~----~~~~~~~~~~~~~i~~~i~~~l~~lh~~  118 (264)
T cd06626          81 CSGGTLEELL----EHGRILDEHVIRVYTLQLLEGLAYLHSH  118 (264)
T ss_pred             CCCCcHHHHH----hhcCCCChHHHHHHHHHHHHHHHHHHHC
Confidence            9999999988    3344578999999999999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.77  E-value=6.9e-18  Score=117.26  Aligned_cols=120  Identities=29%  Similarity=0.491  Sum_probs=98.8

Q ss_pred             hcCceeecccccccceEEEEEEe-----cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-----HTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      .++|++.+.||+|+||.||+|..     .++..+++|.+......  ...+.+|+.++..++||||+++++.+......+
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   83 (283)
T cd05090           4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC   83 (283)
T ss_pred             hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence            35789999999999999999973     24578999988753332  235788999999999999999999999999999


Q ss_pred             EEEeccCCCChhhcccccCC-------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEG-------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|||+.+++|.+++.....             ....+++..+..++.|++.||.|||++
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~  143 (283)
T cd05090          84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH  143 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999988743211             123478899999999999999999974

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.77  E-value=3.8e-18  Score=119.30  Aligned_cols=121  Identities=28%  Similarity=0.390  Sum_probs=98.0

Q ss_pred             hhcCceeecccccccceEEEEEEecC---------------CCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccce
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLHT---------------GGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQL   90 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~~---------------~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~   90 (148)
                      +..+|.+.+.||+|+||.||.|....               ...+|+|.+......  ...+.+|++++..++|||++++
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~   82 (295)
T cd05097           3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRL   82 (295)
T ss_pred             chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence            34579999999999999999987421               235899988764322  3358899999999999999999


Q ss_pred             eeEEEeCCeEEEEEeccCCCChhhcccccCC--------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           91 LGFYSEGSKRALVYEYMPNGSLDRHIFPNEG--------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        91 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++.+...+..+++|||+.+++|.+++.....        ....+++..++.++.|++.||.|||++
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~  148 (295)
T cd05097          83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL  148 (295)
T ss_pred             EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999988743211        112468899999999999999999974

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.77  E-value=8.3e-18  Score=117.18  Aligned_cols=119  Identities=24%  Similarity=0.304  Sum_probs=98.6

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEe--CCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSE--GSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~  104 (148)
                      ++|...+.||.|++|.||.+.. .++..+|+|.+.....  ....+.+|+++++.++||||+++++.+..  .+..+++|
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            3678899999999999999996 4688999998875433  23458899999999999999999998754  44689999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++++|.+++.........+++..+..++.|++.||.|||++
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~  124 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR  124 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999887643223445689999999999999999999964

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.77  E-value=9.5e-18  Score=116.94  Aligned_cols=115  Identities=24%  Similarity=0.384  Sum_probs=98.1

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++|.+.+.||+|++|.||++... ++..+|+|.+.....  ....+.+|+.+++.++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            57899999999999999999854 688999999865332  233467899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+ +|.+++..   ....+++..+..++.|++.||.|||++
T Consensus        85 ~~~-~L~~~~~~---~~~~~~~~~~~~~~~ql~~al~~lH~~  122 (291)
T cd07844          85 LDT-DLKQYMDD---CGGGLSMHNVRLFLFQLLRGLAYCHQR  122 (291)
T ss_pred             CCC-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            985 89888743   234688999999999999999999974

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.77  E-value=1.2e-17  Score=114.18  Aligned_cols=116  Identities=16%  Similarity=0.249  Sum_probs=99.7

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +|.+.+.||+|++|.||.+.. .++..+++|.+......   ...+.+|+.+++.++|||++++++.+...+..++++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            478899999999999999985 47889999998764332   34578899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~  120 (256)
T cd08220          81 APGGTLAEYIQKR--CNSLLDEDTILHFFVQILLALHHVHTK  120 (256)
T ss_pred             CCCCCHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999988432  234589999999999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.77  E-value=3.7e-18  Score=118.33  Aligned_cols=109  Identities=22%  Similarity=0.353  Sum_probs=89.3

Q ss_pred             ccccccceEEEEEEec-------------------------CCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccce
Q 041447           37 SSGKDGFGSVYKGQLH-------------------------TGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQL   90 (148)
Q Consensus        37 ~lg~g~~~~v~~~~~~-------------------------~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~   90 (148)
                      .||+|+||.||.|...                         ....+++|.+...... ...+.+|+.++..++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            5899999999998631                         1135788887654332 3357788889999999999999


Q ss_pred             eeEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           91 LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        91 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++...+..++||||+++|+|..++..   ....+++..+..++.|++.||+|||++
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~  136 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRK---EKGRVPVAWKITVAQQLASALSYLEDK  136 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence            9999999999999999999999988732   235688999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.77  E-value=6.1e-18  Score=121.95  Aligned_cols=113  Identities=22%  Similarity=0.299  Sum_probs=95.7

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCC-----eEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGS-----KRA  101 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~  101 (148)
                      +|++.+.||+|+||.||++.. .++..+|+|.+.....   ....+.+|+.++..++||||+++++++...+     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            467889999999999999985 5789999998865322   2345789999999999999999999988766     789


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++||+.+ +|.+.+    .....+++..+..++.|++.||.|||++
T Consensus        81 lv~e~~~~-~l~~~~----~~~~~l~~~~~~~~~~qi~~aL~~LH~~  122 (372)
T cd07853          81 VVTELMQS-DLHKII----VSPQPLSSDHVKVFLYQILRGLKYLHSA  122 (372)
T ss_pred             EEeecccc-CHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999974 888877    3445689999999999999999999974

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.77  E-value=3.8e-18  Score=121.84  Aligned_cols=124  Identities=27%  Similarity=0.424  Sum_probs=98.3

Q ss_pred             HHhhhcCceeecccccccceEEEEEEe------cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCcccceeeEEE
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQLLGFYS   95 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~~~~~~   95 (148)
                      |..+.++|.+.+.||+|+||.||.|..      .+++.+|+|.++.....  ...+.+|+.++..+ +||||+++++.+.
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   81 (343)
T cd05103           2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT   81 (343)
T ss_pred             cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence            345667899999999999999999973      25678999998764332  33577899999999 6899999999876


Q ss_pred             e-CCeEEEEEeccCCCChhhcccccCC-----------------------------------------------------
Q 041447           96 E-GSKRALVYEYMPNGSLDRHIFPNEG-----------------------------------------------------  121 (148)
Q Consensus        96 ~-~~~~~lv~e~~~~g~L~~~l~~~~~-----------------------------------------------------  121 (148)
                      . ....+++|||+++|+|.+++.....                                                     
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (343)
T cd05103          82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV  161 (343)
T ss_pred             cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence            5 4567899999999999988743210                                                     


Q ss_pred             ----------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          122 ----------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       122 ----------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                                ....+++..+..++.|++.||+|||++
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~  198 (343)
T cd05103         162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR  198 (343)
T ss_pred             hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC
Confidence                      012467888899999999999999974

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=1.5e-17  Score=117.35  Aligned_cols=117  Identities=26%  Similarity=0.325  Sum_probs=100.8

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|++.+.||+|++|.||.+... ++..+|+|.+......    ...+..|+.++..++||+|+++++.+......+++|
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            36889999999999999999864 5889999998765433    234778999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+++|.+++..  .....+++..+..++.|++.||.|||++
T Consensus        81 e~~~~~~L~~~~~~--~~~~~l~~~~~~~~~~qi~~~l~~lH~~  122 (316)
T cd05574          81 DYCPGGELFRLLQR--QPGKCLSEEVARFYAAEVLLALEYLHLL  122 (316)
T ss_pred             EecCCCCHHHHHHh--CCCCccCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999998743  2345689999999999999999999974

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.77  E-value=1e-17  Score=116.44  Aligned_cols=116  Identities=30%  Similarity=0.431  Sum_probs=96.5

Q ss_pred             cCceeecccccccceEEEEEEe-----cCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEe--CCeEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-----HTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSE--GSKRA  101 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~  101 (148)
                      .+|++.+.||+|+||.||.+..     .++..+++|.+...... ...+.+|+.++..++||||+++.+.+..  ....+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            4788999999999999999973     25778999998654332 3457899999999999999999987654  34688


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++||+++|+|.+++..   ....+++..++.++.|++.||+|||++
T Consensus        84 lv~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~aL~~LH~~  127 (284)
T cd05081          84 LVMEYLPYGSLRDYLQK---HRERLDHRKLLLYASQICKGMEYLGSK  127 (284)
T ss_pred             EEEEecCCCCHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999998843   234589999999999999999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.77  E-value=1.4e-17  Score=116.57  Aligned_cols=114  Identities=22%  Similarity=0.308  Sum_probs=99.4

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .+|.+.+.+|+|++|.||++.. .++..+++|.+...... ...+.+|+.+++.+.|||++++.+.+......++|+||+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            4789999999999999999985 46889999988764433 445788999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++|.+++.     ...+++.++..++.|++.||+|||++
T Consensus       100 ~~~~L~~~~~-----~~~~~~~~~~~i~~ql~~aL~~LH~~  135 (296)
T cd06654         100 AGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHSN  135 (296)
T ss_pred             CCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999883     23478999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.77  E-value=9.7e-18  Score=116.33  Aligned_cols=118  Identities=21%  Similarity=0.310  Sum_probs=95.6

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC--HHHHHHHHHH-HhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS--AVEFINEVST-IGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~--~~~~~~e~~~-l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++|.+.+.||+|+||.||++.. .++..+|+|.++.....  ...+..|+.. ++..+||||+++++.+...+..++++|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            3788999999999999999985 47899999998765432  2345566664 556689999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++ +|.+++.........+++..++.++.|++.||.|||++
T Consensus        81 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  122 (283)
T cd06617          81 VMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK  122 (283)
T ss_pred             hhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            9974 78776644323446789999999999999999999974

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.77  E-value=1.3e-17  Score=114.41  Aligned_cols=114  Identities=25%  Similarity=0.345  Sum_probs=101.0

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++|.+.+.||+|++|.||++... +++.+++|.+.....  ....+.+|+..+..++|||++++++.+...+..++++||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            36888999999999999999864 689999999877543  345688999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +++++|.+++.    ....+++..++.++.|++.||+|||+
T Consensus        81 ~~~~~L~~~l~----~~~~l~~~~~~~~~~~l~~~l~~lh~  117 (264)
T cd06623          81 MDGGSLADLLK----KVGKIPEPVLAYIARQILKGLDYLHT  117 (264)
T ss_pred             cCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            99999999983    33568999999999999999999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.77  E-value=6.6e-18  Score=116.85  Aligned_cols=122  Identities=27%  Similarity=0.400  Sum_probs=100.0

Q ss_pred             hhhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCC
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGS   98 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   98 (148)
                      +..++|.+.+.||+|+||.||++...      ++..+++|.+......  ...+.+|+.++..++||||+++++.+....
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~   82 (277)
T cd05032           3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ   82 (277)
T ss_pred             cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence            45568999999999999999999743      2468999998654322  235778999999999999999999999999


Q ss_pred             eEEEEEeccCCCChhhcccccCC------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEG------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..+++|||+++|+|.+++.....      ....+++..+..++.|++.||.|||++
T Consensus        83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  138 (277)
T cd05032          83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK  138 (277)
T ss_pred             CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999998854221      123468889999999999999999974

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.77  E-value=7.4e-18  Score=116.80  Aligned_cols=122  Identities=25%  Similarity=0.416  Sum_probs=98.6

Q ss_pred             hhhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCC
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGS   98 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   98 (148)
                      +..++|++.+.||+|+||.||.+...      ++..+|+|.+.....  ...++.+|+.+++.++||||+++++.+...+
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~   82 (277)
T cd05062           3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ   82 (277)
T ss_pred             ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            34567999999999999999998742      356799998865322  2334788999999999999999999999889


Q ss_pred             eEEEEEeccCCCChhhcccccCCC------CCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGR------GKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~------~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..+++|||+++|+|.+++......      ...+++..+..++.|++.||+|||++
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~  138 (277)
T cd05062          83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN  138 (277)
T ss_pred             CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999988432111      23457888999999999999999974

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.77  E-value=8.7e-18  Score=117.13  Aligned_cols=121  Identities=24%  Similarity=0.440  Sum_probs=99.9

Q ss_pred             hhcCceeecccccccceEEEEEEe------cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      ..++|.+.+.+|+|+||.||.+..      .++..+++|.+..... ....+.+|+.++..++||+|+++++.+...+..
T Consensus         3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (288)
T cd05093           3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL   82 (288)
T ss_pred             chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence            456789999999999999999973      1345688898865432 234588999999999999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccC---------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNE---------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++||+++++|.+++....         .....+++..+..++.|++.||+|||++
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~  139 (288)
T cd05093          83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ  139 (288)
T ss_pred             EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999998885321         1223589999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.77  E-value=3.5e-18  Score=118.85  Aligned_cols=117  Identities=21%  Similarity=0.307  Sum_probs=99.5

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++|++.+.||+|+||.||++... ++..+|+|.+......  ...+.+|+.++..++||||+++++.+...+..++++||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            36888999999999999999864 7889999988653222  34578899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +++++|..++... .....+++..+..++.|++.||.|||+
T Consensus        81 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~  120 (286)
T cd06622          81 MDAGSLDKLYAGG-VATEGIPEDVLRRITYAVVKGLKFLKE  120 (286)
T ss_pred             cCCCCHHHHHHhc-cccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999998887432 123468999999999999999999995

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.77  E-value=1.4e-17  Score=114.60  Aligned_cols=115  Identities=23%  Similarity=0.306  Sum_probs=95.8

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC------HHHHHHHHHHHhcCCCCcccceeeEEEeC--CeE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS------AVEFINEVSTIGRIHHVNVVQLLGFYSEG--SKR  100 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~  100 (148)
                      .+|.+.+.||+|+||.||.+.. .++..+++|.+......      ...+.+|+.++..+.||||+++++.+...  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            4789999999999999999985 56889999988543211      23477899999999999999999987653  467


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++||+++++|.+++.    ....+++..+..++.|++.||+|||++
T Consensus        82 ~~v~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~l~~~l~~lH~~  125 (265)
T cd06652          82 SIFMEHMPGGSIKDQLK----SYGALTENVTRKYTRQILEGVSYLHSN  125 (265)
T ss_pred             EEEEEecCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            89999999999999883    334578899999999999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.76  E-value=2.1e-17  Score=114.78  Aligned_cols=111  Identities=20%  Similarity=0.293  Sum_probs=95.2

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++|++.+.||+|+||.||++.. .++..+|+|.+......  ...+.+|+.++.+++||||+++++.+...+..++++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            3678889999999999999985 57889999988654222  34578899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|..+.        .+++..+..++.|++.||.|||++
T Consensus        81 ~~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~  114 (279)
T cd06619          81 MDGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSL  114 (279)
T ss_pred             CCCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999886532        368889999999999999999974

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.76  E-value=8.5e-18  Score=118.06  Aligned_cols=124  Identities=23%  Similarity=0.344  Sum_probs=102.1

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEe------cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCcccceeeE
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQLLGF   93 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~~~~   93 (148)
                      .-+....++|.+.+.||+|+||.||.+..      .++..+|+|.+......  .+.+.+|+.++.++ +||||+++++.
T Consensus        28 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  107 (302)
T cd05055          28 LKWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGA  107 (302)
T ss_pred             ccccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEE
Confidence            33455667899999999999999999973      13557999988754332  34578899999999 79999999999


Q ss_pred             EEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        94 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +...+..++++||+.+|+|.+++...  ....+++.++..++.|++.||+|||++
T Consensus       108 ~~~~~~~~lv~e~~~~~~L~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~  160 (302)
T cd05055         108 CTIGGPILVITEYCCYGDLLNFLRRK--RESFLTLEDLLSFSYQVAKGMAFLASK  160 (302)
T ss_pred             EecCCceEEEEEcCCCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999999999999988432  123379999999999999999999974

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.76  E-value=3.5e-18  Score=118.16  Aligned_cols=115  Identities=22%  Similarity=0.289  Sum_probs=99.7

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv  103 (148)
                      ++|.+.+.||+|++|.||++.. .++..+++|++..+..    ....+.+|..++..++ ||||+++++.+...+..+++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            4789999999999999999985 4788999999876322    2344778899999998 99999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||++.+++|.+++    .....+++..++.++.|++.||.|||++
T Consensus        81 ~e~~~~~~L~~~l----~~~~~l~~~~~~~i~~ql~~~l~~Lh~~  121 (280)
T cd05581          81 LEYAPNGELLQYI----RKYGSLDEKCTRFYAAEILLALEYLHSK  121 (280)
T ss_pred             EcCCCCCcHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999988    3344789999999999999999999974

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.76  E-value=1.3e-17  Score=114.89  Aligned_cols=113  Identities=29%  Similarity=0.436  Sum_probs=96.5

Q ss_pred             ceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH----------HHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           32 LDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA----------VEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~----------~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      |.+...||+|++|.||.|.. .++..+++|.+.......          ..+.+|+.++..++||||+++++.+...+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            56778999999999999985 468899999886533221          2467899999999999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++||+++++|.+++    .....+++..+..++.|++.||+|||++
T Consensus        82 ~lv~e~~~~~~L~~~l----~~~~~l~~~~~~~~~~~l~~~l~~lH~~  125 (267)
T cd06628          82 NIFLEYVPGGSVAALL----NNYGAFEETLVRNFVRQILKGLNYLHNR  125 (267)
T ss_pred             EEEEEecCCCCHHHHH----HhccCccHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999988    3345688999999999999999999964

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.76  E-value=9.6e-18  Score=117.07  Aligned_cols=118  Identities=22%  Similarity=0.415  Sum_probs=100.5

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      +.+.|++.+.||+|+||.||++.. .++..+++|.+..... ....+.+|+.++..++||||+++.+.+..++..+++||
T Consensus        10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   89 (292)
T cd06644          10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE   89 (292)
T ss_pred             cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence            346789999999999999999986 4688999999875433 24457889999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++++|..++..   ....+++..+..++.|++.||.|||++
T Consensus        90 ~~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~  129 (292)
T cd06644          90 FCPGGAVDAIMLE---LDRGLTEPQIQVICRQMLEALQYLHSM  129 (292)
T ss_pred             cCCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999877632   234589999999999999999999974

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.76  E-value=1.5e-17  Score=116.48  Aligned_cols=114  Identities=22%  Similarity=0.304  Sum_probs=99.7

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .+|.+.+.||+|++|.||++.. .++..+|+|.+...... .+.+.+|+.++..++||||+++++.+..++..++++||+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            5789999999999999999985 57889999998764433 345778999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++|.+++.     ...+++.++..++.|++.||.|||++
T Consensus        99 ~~~~L~~~~~-----~~~~~~~~~~~~~~~l~~~L~~LH~~  134 (297)
T cd06656          99 AGGSLTDVVT-----ETCMDEGQIAAVCRECLQALDFLHSN  134 (297)
T ss_pred             CCCCHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999872     23478999999999999999999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.76  E-value=6.7e-18  Score=119.69  Aligned_cols=109  Identities=24%  Similarity=0.321  Sum_probs=88.9

Q ss_pred             cccccccceEEEEEEec-CCCEEEEEEccCCCc----CHHHHHHHHH-HHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF----SAVEFINEVS-TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~----~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||++... ++..+|+|++.....    ....+..|.. ++..++||||+++++.+...+..+++|||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            36899999999999964 678899999865321    1223444443 46778999999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|.+++    .....+++..+..++.|++.||.|||++
T Consensus        81 ~~L~~~~----~~~~~~~~~~~~~~~~qi~~~L~~lH~~  115 (325)
T cd05602          81 GELFYHL----QRERCFLEPRARFYAAEIASALGYLHSL  115 (325)
T ss_pred             CcHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999988    3445678999999999999999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.76  E-value=9.5e-18  Score=117.36  Aligned_cols=121  Identities=26%  Similarity=0.384  Sum_probs=98.4

Q ss_pred             hhcCceeecccccccceEEEEEEec-----------------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCccc
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-----------------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVV   88 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-----------------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~   88 (148)
                      +.++|++.+.||+|+||.||.+...                 ++..+|+|.+......  ...+.+|+.++..++||||+
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   82 (296)
T cd05095           3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNII   82 (296)
T ss_pred             ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcc
Confidence            3467999999999999999988521                 2346899988754322  34588999999999999999


Q ss_pred             ceeeEEEeCCeEEEEEeccCCCChhhcccccCC-------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           89 QLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEG-------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        89 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++.+...+..+++|||+.+|+|.+++.....       ....+++..+..++.|++.||+|||++
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~  149 (296)
T cd05095          83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL  149 (296)
T ss_pred             eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999999999999988854221       123477889999999999999999974

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.76  E-value=1.7e-17  Score=115.75  Aligned_cols=120  Identities=25%  Similarity=0.342  Sum_probs=100.4

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcC-CCCcccceeeEEEeC-----CeEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEG-----SKRA  101 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~-----~~~~  101 (148)
                      .++|.+.+.||+|+||.||++.. .+++.+|+|.+.........+.+|+.++..+ +|||++++++.+...     +..+
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~  100 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLW  100 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeE
Confidence            45799999999999999999985 5788999999876544456677889899888 799999999998653     3589


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++||+++++|.+++.........+++..++.++.|++.||+|||++
T Consensus       101 lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~  147 (291)
T cd06639         101 LVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN  147 (291)
T ss_pred             EEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999988743323445689999999999999999999974

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.76  E-value=1.4e-17  Score=115.60  Aligned_cols=109  Identities=25%  Similarity=0.355  Sum_probs=90.9

Q ss_pred             cccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCCh
Q 041447           38 SGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL  112 (148)
Q Consensus        38 lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L  112 (148)
                      ||+|+||.||++.. .+++.+|+|.+.....    .......|+.++..++||||+++.+.+......+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            69999999999985 4689999999864222    123356799999999999999999999999999999999999999


Q ss_pred             hhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          113 DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       113 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++...  ....+++..+..++.|++.||+|||++
T Consensus        81 ~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~  114 (277)
T cd05607          81 KYHIYNV--GERGLEMERVIHYSAQITCGILHLHSM  114 (277)
T ss_pred             HHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            8877432  234478999999999999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.76  E-value=1.8e-17  Score=113.15  Aligned_cols=110  Identities=26%  Similarity=0.445  Sum_probs=94.1

Q ss_pred             cccccccceEEEEEEecCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCChh
Q 041447           36 WSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD  113 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~  113 (148)
                      +.||+|+||.||++...++..+|+|.+......  ...+.+|+.++..++||||+++++.+...+..+++|||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            368999999999998777889999988764332  235788999999999999999999999999999999999999999


Q ss_pred             hcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          114 RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       114 ~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++..   ....+++..+..++.|++.||.|||++
T Consensus        81 ~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~  112 (250)
T cd05085          81 SFLRK---KKDELKTKQLVKFALDAAAGMAYLESK  112 (250)
T ss_pred             HHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            98743   234578999999999999999999964

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.76  E-value=1.7e-18  Score=130.89  Aligned_cols=123  Identities=15%  Similarity=0.172  Sum_probs=99.2

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEecC-CCEEEEEEccCCCc-CHHHHHHHHHHHhcCC-CCcccceeeEE-Ee--
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQLHT-GGLIAVKMLENSNF-SAVEFINEVSTIGRIH-HVNVVQLLGFY-SE--   96 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~-~~~i~~~~~~~-~~--   96 (148)
                      ....+...++++.+.|.+|||+.||.+.... +..+|+|++-..+. ....+.+|+++|+.|+ |+|||.+++.. ..  
T Consensus        30 ~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~  109 (738)
T KOG1989|consen   30 QTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRS  109 (738)
T ss_pred             eEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEecccccccc
Confidence            3444556678899999999999999999654 48999998755433 3445889999999997 99999999942 21  


Q ss_pred             ----CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           97 ----GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        97 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                          .-+..|+||||.+|.|-+++...  ....+++..++.|+.|++.||.+||.
T Consensus       110 ~~~~~~EvllLmEyC~gg~Lvd~mn~R--lq~~lte~eVLkIf~dv~~AVa~mH~  162 (738)
T KOG1989|consen  110 SNNGVWEVLLLMEYCKGGSLVDFMNTR--LQTRLTEDEVLKIFYDVCEAVAAMHY  162 (738)
T ss_pred             CCCceeEEEeehhhccCCcHHHHHHHH--HhccCChHHHHHHHHHHHHHHHHHhc
Confidence                23577999999999999999543  23449999999999999999999996

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.76  E-value=7.4e-18  Score=118.99  Aligned_cols=118  Identities=24%  Similarity=0.383  Sum_probs=96.3

Q ss_pred             hhhcCceeecccccccceEEEEEEec-CCC----EEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCe
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH-TGG----LIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~----~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   99 (148)
                      +...+|+..+.||+|+||.||+|... ++.    .+|+|.+.....  ..+.+.+|+.++..++||||+++++.+... .
T Consensus         4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~   82 (316)
T cd05108           4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T   82 (316)
T ss_pred             cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-C
Confidence            34567999999999999999999843 333    489999865332  234588899999999999999999988764 4


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++++||+.+|+|.+++..+   ...+++..+..++.|++.||+|||++
T Consensus        83 ~~~v~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~  128 (316)
T cd05108          83 VQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEER  128 (316)
T ss_pred             ceeeeecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHhc
Confidence            67999999999999988432   34578999999999999999999974

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.76  E-value=9.8e-18  Score=116.97  Aligned_cols=125  Identities=26%  Similarity=0.401  Sum_probs=102.1

Q ss_pred             HHHhhhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCcccceeeEE
Q 041447           24 LRKLLDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQLLGFY   94 (148)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~~~~~   94 (148)
                      ..++..++|++.+.||+|+||.||++...      ....+++|.+......  ...+.+|+.++..+ +||||+++++.+
T Consensus         6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~   85 (293)
T cd05053           6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC   85 (293)
T ss_pred             ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            34556678999999999999999999742      2357899988753322  23477899999999 799999999999


Q ss_pred             EeCCeEEEEEeccCCCChhhcccccC------------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           95 SEGSKRALVYEYMPNGSLDRHIFPNE------------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        95 ~~~~~~~lv~e~~~~g~L~~~l~~~~------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ...+..+++|||+++|+|.+++....            .....+++..+..++.|++.||+|||++
T Consensus        86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~  151 (293)
T cd05053          86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK  151 (293)
T ss_pred             cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999999999998885321            2345689999999999999999999964

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.76  E-value=1.2e-17  Score=114.29  Aligned_cols=116  Identities=27%  Similarity=0.434  Sum_probs=101.4

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .++|.+.+.+|+|++|.||.+... ++..+++|.+..... ...+.+|++.++.++||||+++.+.+......++++||+
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            357889999999999999999964 578999999876433 567889999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++|.+++..   ....+++..+..++.|++.||.|||++
T Consensus        81 ~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~~l~~lh~~  118 (256)
T cd06612          81 GAGSVSDIMKI---TNKTLTEEEIAAILYQTLKGLEYLHSN  118 (256)
T ss_pred             CCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999998832   235689999999999999999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.76  E-value=1.3e-18  Score=119.93  Aligned_cols=110  Identities=28%  Similarity=0.426  Sum_probs=99.5

Q ss_pred             ecccccccceEEEEEE-ecCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEEeccCCCC
Q 041447           35 TWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNF-SAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVYEYMPNGS  111 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~-~~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~g~  111 (148)
                      .+.||+|+++.|-.|. ..+|.++|||++++... ...+..+|++++.+++ |+||++++++|++....|+|+|-+.||.
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGp  162 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGP  162 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCch
Confidence            3678999999999998 56899999999988544 4566889999999996 9999999999999999999999999999


Q ss_pred             hhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          112 LDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       112 L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |..+|    ....++++..+..+..+|+.||.|||+.
T Consensus       163 lLshI----~~~~~F~E~EAs~vvkdia~aLdFlH~k  195 (463)
T KOG0607|consen  163 LLSHI----QKRKHFNEREASRVVKDIASALDFLHTK  195 (463)
T ss_pred             HHHHH----HHhhhccHHHHHHHHHHHHHHHHHHhhc
Confidence            99999    6678899999999999999999999973

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.76  E-value=1.5e-17  Score=114.75  Aligned_cols=117  Identities=26%  Similarity=0.408  Sum_probs=98.3

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcC-CCCcccceeeEEEeC------CeEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEG------SKRA  101 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~------~~~~  101 (148)
                      ..|.+.+.||+|+||.||+|.. .++..+|+|.+.........+.+|+.++..+ +||||+++.+.+...      ...+
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~   85 (272)
T cd06637           6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW   85 (272)
T ss_pred             hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEE
Confidence            3577888899999999999985 4688999999877655566788999999988 699999999998753      4588


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|||+.+++|.+++...  ....+++..+..++.|++.||+|||++
T Consensus        86 iv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~  130 (272)
T cd06637          86 LVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH  130 (272)
T ss_pred             EEEEcCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999988432  234688999999999999999999974

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.76  E-value=1.8e-17  Score=115.09  Aligned_cols=114  Identities=22%  Similarity=0.356  Sum_probs=99.0

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +|++.+.||+|++|.||+|.. .++..+++|.+.....   ....+.+|+.+++.++||||+++++.+......++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            478899999999999999985 4688999999876442   235688999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      + +++|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        81 ~-~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~  118 (286)
T cd07832          81 M-PSDLSEVLRD---EERPLPEAQVKSYMRMLLKGVAYMHAN  118 (286)
T ss_pred             c-CCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9 9999998743   235689999999999999999999974

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.76  E-value=1.3e-17  Score=115.67  Aligned_cols=116  Identities=26%  Similarity=0.429  Sum_probs=98.7

Q ss_pred             cCceeecccccccceEEEEEEec-----CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEe--CCeE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-----TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSE--GSKR  100 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~  100 (148)
                      ++|++.+.||+|+||.||.+...     ++..+|+|.+......  ...+.+|+..+..++||||+++.+++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            46788899999999999999842     4678999999775553  4568899999999999999999998877  5578


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++||+++++|.+++...   ...+++..+..++.|++.||+|||++
T Consensus        84 ~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~  128 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYLGSQ  128 (284)
T ss_pred             EEEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999998432   23589999999999999999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.76  E-value=9.7e-18  Score=114.84  Aligned_cols=109  Identities=24%  Similarity=0.396  Sum_probs=89.8

Q ss_pred             cccccccceEEEEEEec-CC----------CEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           36 WSSGKDGFGSVYKGQLH-TG----------GLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~-~~----------~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      +.||+|+||.||++... ++          ..+++|.+.........+.+|+.++..++||||+++++.+.. ...++++
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~   79 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE   79 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence            36899999999999854 23          247778766544335668899999999999999999999887 7789999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|.+++...   ...+++..+..++.|++.||.|||++
T Consensus        80 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~  120 (259)
T cd05037          80 EYVKFGPLDVFLHRE---KNNVSLHWKLDVAKQLASALHYLEDK  120 (259)
T ss_pred             EcCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            999999999988432   22689999999999999999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.76  E-value=1.5e-17  Score=116.88  Aligned_cols=121  Identities=25%  Similarity=0.399  Sum_probs=97.2

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCC--EEEEEEccCCCc--CHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGG--LIAVKMLENSNF--SAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~--~~avk~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~  101 (148)
                      ..++|++.+.||+|+||.||+|... ++.  .+++|.+.....  ....+.+|+.++..+ +||||+++++.+...+..+
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~   84 (303)
T cd05088           5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   84 (303)
T ss_pred             chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence            3457899999999999999999853 454  356776654222  233577899999999 7999999999999999999


Q ss_pred             EEEeccCCCChhhcccccC------------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNE------------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++||+++++|.+++....            .....+++..+..++.|++.||+|||++
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~  143 (303)
T cd05088          85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK  143 (303)
T ss_pred             EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999885431            1123578999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.76  E-value=7.5e-19  Score=116.97  Aligned_cols=125  Identities=24%  Similarity=0.263  Sum_probs=107.2

Q ss_pred             HHHhhhcCceeecccccccceEEEEEE-ecCCCEEEEEEccCCC-cCHHHHHHHHHHHhcCCCCcccceeeEEEe-----
Q 041447           24 LRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSN-FSAVEFINEVSTIGRIHHVNVVQLLGFYSE-----   96 (148)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~~~v~~~~-~~~~~~~avk~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----   96 (148)
                      ..-++.++|.+.+.||+|||+.|+.+. ..++..+|+|.+.+.. .+.+...+|++..+.++|||++++++....     
T Consensus        15 tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~   94 (302)
T KOG2345|consen   15 TVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG   94 (302)
T ss_pred             cEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence            344567899999999999999999998 4678899999987765 455668999999999999999999876533     


Q ss_pred             CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           97 GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        97 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ....||+.+|...|+|.+.+......+..+++.+++.++.++++||++||+.
T Consensus        95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~  146 (302)
T KOG2345|consen   95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK  146 (302)
T ss_pred             ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence            3459999999999999999876656677899999999999999999999973

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.76  E-value=1.5e-17  Score=129.46  Aligned_cols=119  Identities=18%  Similarity=0.231  Sum_probs=99.0

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      .+|.+.+.||+|+||.||+|.. .+++.+|+|++......    ..++.+|+.++..++||||+++++.+...+..+++|
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            4789999999999999999985 46889999998753322    345889999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccC-------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNE-------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||++||+|.+++....       ......+...+..++.|++.||+|||++
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~  132 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK  132 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999998874311       1123456778899999999999999974

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.76  E-value=1.3e-17  Score=116.23  Aligned_cols=121  Identities=25%  Similarity=0.426  Sum_probs=100.0

Q ss_pred             hhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCe
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   99 (148)
                      ..++|.+.+.||+|+||.||++...      ++..+|+|.+......  ...+.+|+.++..++||||+++++.+.....
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~   82 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP   82 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence            3467899999999999999999842      4678999988754322  3458889999999999999999999999889


Q ss_pred             EEEEEeccCCCChhhcccccC------------------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNE------------------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~------------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++++||+++|+|.+++....                  .....+++..++.++.|++.||.|||++
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~  149 (288)
T cd05050          83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER  149 (288)
T ss_pred             cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999885321                  1123478899999999999999999974

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.76  E-value=1.6e-17  Score=115.17  Aligned_cols=117  Identities=26%  Similarity=0.421  Sum_probs=97.1

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCC----EEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGG----LIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~----~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      ...+|++.+.||+|+||.||+|... ++.    .+++|.+......  ...+.+|+..+..++||||+++++.+.. ...
T Consensus         5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~   83 (279)
T cd05057           5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV   83 (279)
T ss_pred             CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence            4567899999999999999999843 333    5888887654332  3457889999999999999999999887 778


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++||+++|+|.+++..   ....+++..+..++.|++.||+|||++
T Consensus        84 ~~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~  128 (279)
T cd05057          84 QLITQLMPLGCLLDYVRN---HKDNIGSQYLLNWCVQIAKGMSYLEEK  128 (279)
T ss_pred             EEEEecCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999998843   234589999999999999999999974

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.75  E-value=1.3e-17  Score=122.72  Aligned_cols=118  Identities=17%  Similarity=0.280  Sum_probs=94.1

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeC--------
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG--------   97 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------   97 (148)
                      ....+|.+.+.||+|+||.||+|.. .++..+|+|.+....   ....+|+.+++.++||||+++.+++...        
T Consensus        63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            3446799999999999999999985 468899999885432   2345799999999999999998876432        


Q ss_pred             CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..++++|||+++ ++.+++.........+++..++.++.|++.||.|||++
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~  189 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK  189 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            246799999986 77766643223456789999999999999999999974

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.75  E-value=2e-17  Score=115.71  Aligned_cols=114  Identities=24%  Similarity=0.321  Sum_probs=98.5

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .+|.+.+.||+|+||.||++.. .++..+++|.+..... ....+.+|+.++..++|||++++++.+...+..++++||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            4788999999999999999984 4688899999865333 2345788999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++|.+++..     ..+++..+..++.|++.||.|||++
T Consensus        99 ~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~  134 (293)
T cd06647          99 AGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN  134 (293)
T ss_pred             CCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999998832     3478899999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.75  E-value=1.8e-17  Score=115.28  Aligned_cols=115  Identities=23%  Similarity=0.378  Sum_probs=95.8

Q ss_pred             CceeecccccccceEEEEEEe-----cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeC--CeEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-----HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEG--SKRA  101 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-----~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~  101 (148)
                      .|++.+.||+|+||.||.+..     .++..+++|.+.....  ....+.+|+.+++.++|||++++.+.+...  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            467889999999999999973     3577899999865432  234588999999999999999999988764  5688


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|||+++++|.+++..   ....+++..+..++.|++.||+|||++
T Consensus        85 lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~i~~~i~~aL~~lH~~  128 (284)
T cd05079          85 LIMEFLPSGSLKEYLPR---NKNKINLKQQLKYAVQICKGMDYLGSR  128 (284)
T ss_pred             EEEEccCCCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999998832   224589999999999999999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=2.4e-17  Score=113.98  Aligned_cols=113  Identities=23%  Similarity=0.336  Sum_probs=98.5

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      +|.+.+.||.|++|.||++.. .++..+++|.+.....  ....+.+|+.+++.++|||++++.+.+.+....++++||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            678889999999999999985 4688999999876432  2345788999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++|.+++..     ..+++..++.++.|++.||.|||++
T Consensus        82 ~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh~~  117 (274)
T cd06609          82 GGGSCLDLLKP-----GKLDETYIAFILREVLLGLEYLHEE  117 (274)
T ss_pred             CCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999998832     2689999999999999999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.75  E-value=1.8e-17  Score=113.35  Aligned_cols=116  Identities=20%  Similarity=0.366  Sum_probs=99.0

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +|.+.+.||+|+||.||++.. .++..+++|.+.....   ....+.+|+.+++.++||||+++++.+...+..++++||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            478899999999999999985 4688899999865322   334577899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~  120 (257)
T cd08225          81 CDGGDLMKRINRQ--RGVLFSEDQILSWFVQISLGLKHIHDR  120 (257)
T ss_pred             CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999988432  233578999999999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.75  E-value=1.8e-17  Score=115.09  Aligned_cols=120  Identities=28%  Similarity=0.488  Sum_probs=98.6

Q ss_pred             hcCceeecccccccceEEEEEEec-C-----CCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-T-----GGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~-----~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      ..+|++.+.||+|+||.||.|... .     ...+++|.+......  ...+.+|+..+..++||||+++++.+...+..
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT   83 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence            357889999999999999999842 2     257899988654332  34578999999999999999999999988899


Q ss_pred             EEEEeccCCCChhhcccccCC------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEG------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++||+++|+|.+++.....            ....+++..+..++.|++.||.|||++
T Consensus        84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~  143 (283)
T cd05048          84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH  143 (283)
T ss_pred             EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999998854311            114578999999999999999999974

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.75  E-value=2.9e-17  Score=113.85  Aligned_cols=113  Identities=20%  Similarity=0.339  Sum_probs=96.9

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      -|+..+.||.|+||.||++.. .++..+|+|.+......  ...+.+|+..+..++||||+++++.+...+..++++||+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            467788899999999999985 46889999987654322  345778999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++|.+++.     ...+++..+..++.|++.|+.|||++
T Consensus        85 ~~~~l~~~i~-----~~~~~~~~~~~~~~~l~~~l~~lh~~  120 (277)
T cd06641          85 GGGSALDLLE-----PGPLDETQIATILREILKGLDYLHSE  120 (277)
T ss_pred             CCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHccC
Confidence            9999998882     23578999999999999999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.75  E-value=2.7e-17  Score=114.10  Aligned_cols=121  Identities=21%  Similarity=0.313  Sum_probs=98.5

Q ss_pred             hhcCceeecccccccceEEEEEEecC-----CCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEe-CCe
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLHT-----GGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSE-GSK   99 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~   99 (148)
                      ..++|.+.+.||+|+||.||.|....     +..+++|.+......  ...+.+|+..+..++||||+++++++.. +..
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            35689999999999999999998543     678899988653222  3447889999999999999999998765 567


Q ss_pred             EEEEEeccCCCChhhcccccCCC----CCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGR----GKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++++|+.+++|.+++......    ...+++..++.++.|++.||+|||++
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~  136 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR  136 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            88999999999999988543211    25689999999999999999999974

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.75  E-value=2.6e-17  Score=112.59  Aligned_cols=113  Identities=33%  Similarity=0.498  Sum_probs=96.2

Q ss_pred             cccccccceEEEEEEec-C---CCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQLH-T---GGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~-~---~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||++... .   +..+++|.+......  ...+.+|+..+..++|+|++++++++......+++|||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            46899999999999854 3   778999998775443  45688999999999999999999999999999999999999


Q ss_pred             CChhhcccccCCC-----CCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGR-----GKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|.+++......     ...+++..++.++.|++.||.|||++
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~  124 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK  124 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC
Confidence            9999998432111     36789999999999999999999974

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.75  E-value=2.9e-17  Score=115.06  Aligned_cols=114  Identities=21%  Similarity=0.317  Sum_probs=99.5

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .+|++.+.||.|++|.||++.. .+++.+++|.+...... ...+.+|+..+..++|||++++++.+...+..++++||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            4699999999999999999985 57889999988654433 445788999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++|..++.     ...+++.++..++.|++.||+|||++
T Consensus        99 ~~~~L~~~~~-----~~~l~~~~~~~i~~~l~~al~~LH~~  134 (296)
T cd06655          99 AGGSLTDVVT-----ETCMDEAQIAAVCRECLQALEFLHAN  134 (296)
T ss_pred             CCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999998872     23579999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.75  E-value=2.5e-17  Score=114.47  Aligned_cols=112  Identities=29%  Similarity=0.397  Sum_probs=93.6

Q ss_pred             ceeecccccccceEEEEEEe-----cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEe--CCeEEE
Q 041447           32 LDLTWSSGKDGFGSVYKGQL-----HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSE--GSKRAL  102 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~-----~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~l  102 (148)
                      |++.+.||+|+||.||.+..     .++..+|+|.+.....  ....+.+|+.+++.++||||+++.+.+..  ....++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            48889999999999988652     3677899999876433  24457899999999999999999998765  345889


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||+++++|.+++..     ..+++.+++.++.|++.||.|||++
T Consensus        86 v~e~~~~~~l~~~~~~-----~~l~~~~~~~i~~~l~~~l~~lH~~  126 (283)
T cd05080          86 IMEYVPLGSLRDYLPK-----HKLNLAQLLLFAQQICEGMAYLHSQ  126 (283)
T ss_pred             EecCCCCCCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999998832     3489999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.75  E-value=9.3e-18  Score=116.28  Aligned_cols=113  Identities=21%  Similarity=0.355  Sum_probs=96.7

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .|+..+.||+|+||.||+|.. .++..+|+|.++....  ....+.+|+..+..++||||+++.+.+...+..++|+||+
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence            466778899999999999985 4678899998875432  2345789999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++|.+++.     ...+++..+..++.|++.||.|||++
T Consensus        85 ~~~~L~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~  120 (277)
T cd06642          85 GGGSALDLLK-----PGPLEETYIATILREILKGLDYLHSE  120 (277)
T ss_pred             CCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            9999998872     24578999999999999999999974

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.75  E-value=1.8e-17  Score=114.96  Aligned_cols=121  Identities=28%  Similarity=0.422  Sum_probs=100.1

Q ss_pred             hhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCe
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   99 (148)
                      ..++|.+.+.||+|++|.||.+...      .+..+++|.+......  ...+.+|+.++..++||||+++++.+...+.
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            3457899999999999999999853      3567899988654332  3358889999999999999999999988888


Q ss_pred             EEEEEeccCCCChhhcccccCC---CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEG---RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++|||+++++|.+++.....   ....+++..+..++.||+.||+|||++
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  135 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN  135 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999999998854321   123589999999999999999999974

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.75  E-value=1.5e-17  Score=116.70  Aligned_cols=123  Identities=24%  Similarity=0.398  Sum_probs=100.3

Q ss_pred             HhhhcCceeecccccccceEEEEEEec--------CCCEEEEEEccCCCc--CHHHHHHHHHHHhcC-CCCcccceeeEE
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH--------TGGLIAVKMLENSNF--SAVEFINEVSTIGRI-HHVNVVQLLGFY   94 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~--------~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~~~   94 (148)
                      .+..++|.+...||+|+||.||.+...        ++..+++|.+.....  ....+.+|+.++..+ +||||+++++.+
T Consensus        11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~   90 (304)
T cd05101          11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC   90 (304)
T ss_pred             cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence            355678999999999999999999631        234789998865322  234588999999999 799999999999


Q ss_pred             EeCCeEEEEEeccCCCChhhcccccCC------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           95 SEGSKRALVYEYMPNGSLDRHIFPNEG------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        95 ~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ......+++|||+.+|+|.+++.....            ....++...+..++.|++.||.|||++
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~  156 (304)
T cd05101          91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ  156 (304)
T ss_pred             ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999999998854321            124578889999999999999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.75  E-value=3.8e-17  Score=112.31  Aligned_cols=118  Identities=23%  Similarity=0.293  Sum_probs=100.8

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++|++.+.||.|++|.||++.. .++..+++|.+.....  ....+.+|+..++.++|+|++++++.+...+..++++|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            4789999999999999999985 4678899999865433  234588999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++.... ....+++..+..++.|++.||+|||++
T Consensus        81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lh~~  121 (267)
T cd06610          81 LSGGSLLDIMKSSY-PRGGLDEAIIATVLKEVLKGLEYLHSN  121 (267)
T ss_pred             cCCCcHHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999884321 124589999999999999999999974

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.75  E-value=3.8e-17  Score=113.40  Aligned_cols=116  Identities=22%  Similarity=0.369  Sum_probs=98.1

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      +|+..+.||+|++|.||+|.. .++..+|+|.+.....  ....+.+|+.+++.++||||+++++.+...+..++++||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            478899999999999999996 4688999999876433  2345778999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++ +|.+++.... ....+++..+..++.|++.||.|||++
T Consensus        81 ~~-~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~  119 (284)
T cd07836          81 DK-DLKKYMDTHG-VRGALDPNTVKSFTYQLLKGIAFCHEN  119 (284)
T ss_pred             Cc-cHHHHHHhcC-CCCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence            86 8888774322 234689999999999999999999964

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.75  E-value=2.7e-17  Score=113.99  Aligned_cols=114  Identities=22%  Similarity=0.360  Sum_probs=97.6

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ..|+..+.||+|+||.||.|.. .++..+|+|.+.....  ....+.+|+.++..+.||||+++.+.+.+.+..+++|||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            3567788899999999999985 4688999998875432  234578899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++.    . ..+++.++..++.|++.||+|||++
T Consensus        84 ~~~~~L~~~i~----~-~~l~~~~~~~~~~~l~~~l~~lh~~  120 (277)
T cd06640          84 LGGGSALDLLR----A-GPFDEFQIATMLKEILKGLDYLHSE  120 (277)
T ss_pred             CCCCcHHHHHh----c-CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999882    2 3578999999999999999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.75  E-value=3.5e-17  Score=112.21  Aligned_cols=116  Identities=20%  Similarity=0.282  Sum_probs=97.1

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEe--CCeEEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSE--GSKRALVY  104 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~  104 (148)
                      +|++.+.||.|+||.||++.. .++..+++|.+......   ...+..|+.+++.++||||+++++.+..  ....++++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            478889999999999999985 47889999988764433   2347789999999999999999987754  45688999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhh
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH  146 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH  146 (148)
                      ||+++++|.+++.........+++..++.++.|++.||.|||
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH  122 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH  122 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence            999999999988543334567899999999999999999999

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.75  E-value=2.3e-17  Score=113.90  Aligned_cols=112  Identities=27%  Similarity=0.333  Sum_probs=91.0

Q ss_pred             ccccccceEEEEEEec---CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCC
Q 041447           37 SSGKDGFGSVYKGQLH---TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGS  111 (148)
Q Consensus        37 ~lg~g~~~~v~~~~~~---~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~  111 (148)
                      .||+|+||.||+|...   ++..+++|.++.....  ...+.+|+.++..++||||+++++.+......+++|||+++|+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD   81 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence            5799999999999743   3457899988764432  2357889999999999999999999998888999999999999


Q ss_pred             hhhcccccCC-CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          112 LDRHIFPNEG-RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       112 L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |.+++..... .....++..+..++.|++.||+|||++
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~  119 (269)
T cd05087          82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN  119 (269)
T ss_pred             HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC
Confidence            9998854321 223456778889999999999999964

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=1.3e-17  Score=118.43  Aligned_cols=107  Identities=26%  Similarity=0.307  Sum_probs=87.6

Q ss_pred             cccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcC---CCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           38 SGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRI---HHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        38 lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l---~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      ||+|+||.||++.. .++..+|+|++......    ......|..++...   .||+|+.+++.+...+..+++|||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            69999999999985 46889999998653221    12244555555544   699999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|..++    .....+++..+..++.|++.||+|||++
T Consensus        81 g~L~~~l----~~~~~~~~~~~~~~~~qil~al~~LH~~  115 (330)
T cd05586          81 GELFWHL----QKEGRFSEDRAKFYIAELVLALEHLHKY  115 (330)
T ss_pred             ChHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999888    3445689999999999999999999974

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.75  E-value=2.7e-17  Score=113.59  Aligned_cols=112  Identities=24%  Similarity=0.311  Sum_probs=90.0

Q ss_pred             ccccccceEEEEEEecC---CCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCC
Q 041447           37 SSGKDGFGSVYKGQLHT---GGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGS  111 (148)
Q Consensus        37 ~lg~g~~~~v~~~~~~~---~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~  111 (148)
                      .||+|+||.||++...+   ...+++|.+.....  ....+.+|+..+..++||||+++++.+......+++|||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            58999999999997432   23456676654332  24568899999999999999999999999999999999999999


Q ss_pred             hhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          112 LDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       112 L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |.+++..........++..+..++.|++.||+|||++
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~  118 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH  118 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC
Confidence            9998854322334567788899999999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.75  E-value=2.9e-17  Score=113.20  Aligned_cols=117  Identities=29%  Similarity=0.474  Sum_probs=98.2

Q ss_pred             hcCceeecccccccceEEEEEEec-CC---CEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TG---GLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~---~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      .++|+..+.||+|+||.||++... ++   ..+++|.+......  ...+..|+.++..++|||++++.+.+...+..++
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            457888999999999999999853 33   36899988654322  3457889999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||+++++|.+++..   ....+++..+..++.|++.||.|||++
T Consensus        84 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~~  126 (268)
T cd05063          84 ITEYMENGALDKYLRD---HDGEFSSYQLVGMLRGIAAGMKYLSDM  126 (268)
T ss_pred             EEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999998843   234589999999999999999999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.75  E-value=3e-17  Score=113.27  Aligned_cols=112  Identities=30%  Similarity=0.431  Sum_probs=90.3

Q ss_pred             ccccccceEEEEEEec---CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCC
Q 041447           37 SSGKDGFGSVYKGQLH---TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGS  111 (148)
Q Consensus        37 ~lg~g~~~~v~~~~~~---~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~  111 (148)
                      .||+|+||.||.|...   ....+++|.+......  ...+.+|+..++.++||||+++++.+......+++|||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            5899999999999732   3456888877653322  2347789999999999999999999999999999999999999


Q ss_pred             hhhcccccCC-CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          112 LDRHIFPNEG-RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       112 L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |.+++..... .....++..+..++.|++.||+|||++
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  119 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA  119 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc
Confidence            9998854322 123356788899999999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.75  E-value=2.2e-17  Score=113.71  Aligned_cols=110  Identities=21%  Similarity=0.324  Sum_probs=89.7

Q ss_pred             cccccccceEEEEEEecC-------------CCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           36 WSSGKDGFGSVYKGQLHT-------------GGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~~-------------~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      +.||+|+||.||+|...+             ...+++|.+...... ...+..|+.++..++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            357999999999997421             225788887654332 335778888999999999999999999888899


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|||+.+|+|..++..   ....+++..++.++.|++.||+|||++
T Consensus        81 lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~  124 (262)
T cd05077          81 MVEEFVEFGPLDLFMHR---KSDVLTTPWKFKVAKQLASALSYLEDK  124 (262)
T ss_pred             EEEecccCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhhhC
Confidence            99999999999887732   235589999999999999999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=3.9e-17  Score=112.45  Aligned_cols=115  Identities=23%  Similarity=0.336  Sum_probs=95.9

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc------CHHHHHHHHHHHhcCCCCcccceeeEEEeC--CeE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF------SAVEFINEVSTIGRIHHVNVVQLLGFYSEG--SKR  100 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~  100 (148)
                      .+|.+.+.||+|++|.||.+.. .++..+++|.+.....      ....+.+|+.+++.++||||+++++.+.+.  +..
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4789999999999999999985 4688999998753211      123577899999999999999999988653  458


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++||+++++|.+++    .....+++..+..++.|++.||.|||++
T Consensus        82 ~~v~e~~~~~~L~~~~----~~~~~l~~~~~~~~~~~i~~al~~LH~~  125 (264)
T cd06653          82 SIFVEYMPGGSIKDQL----KAYGALTENVTRRYTRQILQGVSYLHSN  125 (264)
T ss_pred             EEEEEeCCCCcHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            8999999999999888    3334578999999999999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.75  E-value=3.2e-17  Score=114.11  Aligned_cols=117  Identities=27%  Similarity=0.318  Sum_probs=101.9

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .+.|...+.+|+|++|.||.+... ++..+++|.+.........+.+|++.+..++|+|++++++.+...+..++++||+
T Consensus        18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   97 (286)
T cd06614          18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYM   97 (286)
T ss_pred             cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEecc
Confidence            346788899999999999999864 6889999999775544556889999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++|.+++..+   ...+++..+..++.|++.||.|||++
T Consensus        98 ~~~~L~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~lH~~  135 (286)
T cd06614          98 DGGSLTDIITQN---FVRMNEPQIAYVCREVLQGLEYLHSQ  135 (286)
T ss_pred             CCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999998432   13689999999999999999999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.75  E-value=1.6e-18  Score=127.08  Aligned_cols=119  Identities=21%  Similarity=0.370  Sum_probs=102.2

Q ss_pred             CcHHHHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCC
Q 041447           19 PSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS   98 (148)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   98 (148)
                      ...+++|+++.+...-.+=||.|+-|.||.|+.. +..||||.++.-.      ..++.-|++++||||+.+.|+|....
T Consensus       113 ~qq~e~WeiPFe~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk------ETdIKHLRkLkH~NII~FkGVCtqsP  185 (904)
T KOG4721|consen  113 QQQEELWEIPFEEISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK------ETDIKHLRKLKHPNIITFKGVCTQSP  185 (904)
T ss_pred             hhhhhhccCCHHHhhhhhhhccCcccceeeeecc-CceehhHHHhhhh------hhhHHHHHhccCcceeeEeeeecCCc
Confidence            3446778887777676778899999999999976 7789999775321      36777899999999999999999999


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      -++|+||||..|.|...+    ...+.+.......+..+|+.||.|||.+
T Consensus       186 cyCIiMEfCa~GqL~~VL----ka~~~itp~llv~Wsk~IA~GM~YLH~h  231 (904)
T KOG4721|consen  186 CYCIIMEFCAQGQLYEVL----KAGRPITPSLLVDWSKGIAGGMNYLHLH  231 (904)
T ss_pred             eeEEeeeccccccHHHHH----hccCccCHHHHHHHHHHhhhhhHHHHHh
Confidence            899999999999999999    5667788999999999999999999964

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.75  E-value=6.3e-17  Score=110.45  Aligned_cols=118  Identities=26%  Similarity=0.452  Sum_probs=101.5

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +|.+.+.||+|++|.||.+.. .++..+++|.+.....   ....+.+|++.+..++|||++++.+.+...+..++++|+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            478889999999999999995 4688999999876543   234578899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++.........+++..+..++.|++.||.|||++
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~  122 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR  122 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999998854322346789999999999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.75  E-value=2.8e-17  Score=114.21  Aligned_cols=114  Identities=20%  Similarity=0.309  Sum_probs=97.1

Q ss_pred             CceeecccccccceEEEEEEec-CCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +|++.+.||+|++|.||+|... ++..+++|.++....   ....+.+|+.+++.++||||+++.+.+..++..++++||
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   81 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY   81 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence            6889999999999999999864 688999998865332   234588999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.++.+..+.    .....+++..++.++.|++.||.|||++
T Consensus        82 ~~~~~l~~~~----~~~~~~~~~~~~~~~~~i~~~l~~LH~~  119 (288)
T cd07833          82 VERTLLELLE----ASPGGLPPDAVRSYIWQLLQAIAYCHSH  119 (288)
T ss_pred             CCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9987666555    2334589999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.75  E-value=2.8e-18  Score=127.13  Aligned_cols=124  Identities=24%  Similarity=0.355  Sum_probs=111.2

Q ss_pred             HHHHHhhhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        22 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      -+.|++.+.+.....+||-|.||.||.|.++ ....+|||.++.+....++|+.|+.+|+.++|||+++++|+|......
T Consensus       259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF  338 (1157)
T KOG4278|consen  259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF  338 (1157)
T ss_pred             cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence            3778888889999999999999999999964 678999999988887888999999999999999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ||++|||..|+|.++++..  ....++.-..+.++.||..||+||..
T Consensus       339 YIiTEfM~yGNLLdYLRec--nr~ev~avvLlyMAtQIsSaMeYLEk  383 (1157)
T KOG4278|consen  339 YIITEFMCYGNLLDYLREC--NRSEVPAVVLLYMATQISSAMEYLEK  383 (1157)
T ss_pred             EEEEecccCccHHHHHHHh--chhhcchhHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999663  34457778888999999999999863

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.75  E-value=3.2e-18  Score=128.80  Aligned_cols=117  Identities=29%  Similarity=0.471  Sum_probs=101.5

Q ss_pred             hhcCceeecccccccceEEEEEEec----CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~----~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      ..+..++.++||.|.||.|++|+.+    ....||||.++.....  ..+|+.|+.+|.+++||||+.+.|+.......+
T Consensus       627 d~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvM  706 (996)
T KOG0196|consen  627 DPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVM  706 (996)
T ss_pred             ChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeE
Confidence            3457888999999999999999842    3558999999875443  345999999999999999999999999999999


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |++|||++|+|+.|++.+   .+.+..-+...+.+.|+.||.||-+
T Consensus       707 IiTEyMENGsLDsFLR~~---DGqftviQLVgMLrGIAsGMkYLsd  749 (996)
T KOG0196|consen  707 IITEYMENGSLDSFLRQN---DGQFTVIQLVGMLRGIASGMKYLSD  749 (996)
T ss_pred             EEhhhhhCCcHHHHHhhc---CCceEeehHHHHHHHHHHHhHHHhh
Confidence            999999999999999654   3558899999999999999999864

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.75  E-value=4.5e-17  Score=112.23  Aligned_cols=114  Identities=22%  Similarity=0.318  Sum_probs=95.8

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC------HHHHHHHHHHHhcCCCCcccceeeEEEe--CCeEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS------AVEFINEVSTIGRIHHVNVVQLLGFYSE--GSKRA  101 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~  101 (148)
                      +|+..+.+|+|+||.||++.. .++..+++|.+......      ...+.+|+.++..++||||+++++.+..  ....+
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT   82 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence            688899999999999999985 46889999988653221      2347789999999999999999998865  36788


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++||+++++|.+++    .....+++...+.++.|++.||.|||++
T Consensus        83 l~~e~~~~~~L~~~l----~~~~~l~~~~~~~~~~qi~~~l~~LH~~  125 (266)
T cd06651          83 IFMEYMPGGSVKDQL----KAYGALTESVTRKYTRQILEGMSYLHSN  125 (266)
T ss_pred             EEEeCCCCCcHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999988    3344588999999999999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.74  E-value=4.1e-17  Score=113.76  Aligned_cols=114  Identities=20%  Similarity=0.301  Sum_probs=96.6

Q ss_pred             CceeecccccccceEEEEEEe----cCCCEEEEEEccCCCc-----CHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL----HTGGLIAVKMLENSNF-----SAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~----~~~~~~avk~~~~~~~-----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~  100 (148)
                      +|++.+.||+|+||.||.+..    .+|..+|+|.+.....     ..+.+.+|+.++..+ +||+|+.+.+.+......
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            478889999999999999984    3688999999865321     234577899999999 599999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++||+++++|.+++.    ....+++..+..++.|++.||.|||++
T Consensus        81 ~lv~e~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~al~~lH~~  124 (290)
T cd05613          81 HLILDYINGGELFTHLS----QRERFKEQEVQIYSGEIVLALEHLHKL  124 (290)
T ss_pred             EEEEecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999883    345688999999999999999999974

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.74  E-value=3.1e-17  Score=112.13  Aligned_cols=114  Identities=36%  Similarity=0.519  Sum_probs=96.3

Q ss_pred             eeecccccccceEEEEEEec-C----CCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           33 DLTWSSGKDGFGSVYKGQLH-T----GGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        33 ~~~~~lg~g~~~~v~~~~~~-~----~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++.+.+|+|+||.||.+... +    +..+|+|.+.....  ....+..|+..+..++||||+++++.+...+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            56788999999999999854 2    37899999976544  24468899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++++|.+++....  ...+++..+..++.|++.||.|||++
T Consensus        82 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~~  122 (258)
T smart00219       82 YMEGGDLLDYLRKNR--PKELSLSDLLSFALQIARGMEYLESK  122 (258)
T ss_pred             ccCCCCHHHHHHhhh--hccCCHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999884321  11289999999999999999999974

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.74  E-value=1.5e-17  Score=118.65  Aligned_cols=124  Identities=27%  Similarity=0.419  Sum_probs=98.8

Q ss_pred             HHhhhcCceeecccccccceEEEEEEe------cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCcccceeeEEE
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQLLGFYS   95 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~~~~~~   95 (148)
                      |+++.++|++.+.||+|+||.||.|..      .+++.+|+|.++.....  .+.+.+|+.++..+ +||||+++++.+.
T Consensus         2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~   81 (337)
T cd05054           2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT   81 (337)
T ss_pred             cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence            455677899999999999999999962      23578999998754332  23467899999999 7999999999876


Q ss_pred             e-CCeEEEEEeccCCCChhhcccccCC-----------------------------------------------------
Q 041447           96 E-GSKRALVYEYMPNGSLDRHIFPNEG-----------------------------------------------------  121 (148)
Q Consensus        96 ~-~~~~~lv~e~~~~g~L~~~l~~~~~-----------------------------------------------------  121 (148)
                      . ....++++||+++++|.+++.....                                                     
T Consensus        82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (337)
T cd05054          82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE  161 (337)
T ss_pred             cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence            5 4568899999999999988743211                                                     


Q ss_pred             ----CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          122 ----RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       122 ----~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                          ....+++..+..++.|++.||+|||++
T Consensus       162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~  192 (337)
T cd05054         162 GDELYKEPLTLEDLISYSFQVARGMEFLASR  192 (337)
T ss_pred             hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC
Confidence                013688999999999999999999974

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.74  E-value=3.2e-17  Score=113.90  Aligned_cols=114  Identities=23%  Similarity=0.415  Sum_probs=96.7

Q ss_pred             ceeecccccccceEEEEEEec-CCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           32 LDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      |++.+.||+|+||.||++... ++..+++|.+..... ....+.+|+.++..++|||++++++.+...+..++++||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            567788999999999999864 577889998865432 234578899999999999999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|..++..   ....+++..+..++.|++.||.|||++
T Consensus        87 ~~l~~~~~~---~~~~l~~~~~~~~~~qi~~~L~~LH~~  122 (282)
T cd06643          87 GAVDAVMLE---LERPLTEPQIRVVCKQTLEALNYLHEN  122 (282)
T ss_pred             CcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999887632   234689999999999999999999974

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.74  E-value=3.2e-17  Score=114.49  Aligned_cols=120  Identities=28%  Similarity=0.430  Sum_probs=98.7

Q ss_pred             hcCceeecccccccceEEEEEEec-----------------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccc
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-----------------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQ   89 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-----------------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~   89 (148)
                      ..+|.+.+.||+|+||.||.+...                 .+..+|+|.+......  ...+.+|+.++..++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            457899999999999999998742                 1245899988764322  345788999999999999999


Q ss_pred             eeeEEEeCCeEEEEEeccCCCChhhcccccCC-------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           90 LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEG-------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        90 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++...+..++++|++.+++|.+++.....       ....+++..++.++.|++.||+|||++
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~  149 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL  149 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            99999998999999999999999998844321       122689999999999999999999974

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.74  E-value=1.5e-17  Score=118.40  Aligned_cols=111  Identities=25%  Similarity=0.397  Sum_probs=93.6

Q ss_pred             hcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhc--CCCCcccceeeEEEeC----CeEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR--IHHVNVVQLLGFYSEG----SKRAL  102 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~--l~~~~i~~~~~~~~~~----~~~~l  102 (148)
                      .....+.+.+|+|.||.||+|.++ |..||||++...  +...+.+|.++.+.  ++|+||+.+++.-..+    ..++|
T Consensus       210 arqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr--dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL  286 (513)
T KOG2052|consen  210 ARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR--DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL  286 (513)
T ss_pred             hheeEEEEEecCccccceeecccc-CCceEEEEeccc--chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence            457889999999999999999998 889999999743  44567777777765  4999999998774332    34899


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |++|.+.|+|.|++.    . ..++......++..++.||+|||-
T Consensus       287 vTdYHe~GSL~DyL~----r-~tv~~~~ml~LalS~AsGLaHLH~  326 (513)
T KOG2052|consen  287 VTDYHEHGSLYDYLN----R-NTVTTEGMLKLALSIASGLAHLHM  326 (513)
T ss_pred             eeecccCCcHHHHHh----h-ccCCHHHHHHHHHHHhhhHHHHHH
Confidence            999999999999993    2 568999999999999999999994

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.74  E-value=4.2e-17  Score=113.87  Aligned_cols=120  Identities=23%  Similarity=0.442  Sum_probs=99.2

Q ss_pred             hcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      ..+|.+.+.||+|+||.||.+...      ++..+++|.+...... ...+.+|+..+..++||||+++++.+...+..+
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI   83 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence            457899999999999999999732      3456888887654432 345889999999999999999999999999999


Q ss_pred             EEEeccCCCChhhcccccC------------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNE------------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|||+++++|.+++..+.            .....+++..++.++.|++.||+|||++
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~  142 (291)
T cd05094          84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ  142 (291)
T ss_pred             EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999885432            1224578999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.74  E-value=3.2e-17  Score=116.59  Aligned_cols=124  Identities=25%  Similarity=0.385  Sum_probs=99.7

Q ss_pred             HHhhhcCceeecccccccceEEEEEEec--------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCcccceeeE
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQLH--------TGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQLLGF   93 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~--------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~~~~   93 (148)
                      +++...+|++.+.||+|+||.||.+...        .+..+|+|.+......  ...+.+|+.++.++ +||||+++++.
T Consensus         7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~   86 (334)
T cd05100           7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGA   86 (334)
T ss_pred             cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence            3445567899999999999999999731        1236899988653322  34578899999999 79999999999


Q ss_pred             EEeCCeEEEEEeccCCCChhhcccccC------------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           94 YSEGSKRALVYEYMPNGSLDRHIFPNE------------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        94 ~~~~~~~~lv~e~~~~g~L~~~l~~~~------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +...+..++++||+++|+|.+++....            .....++...+..++.|++.||.|||++
T Consensus        87 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~  153 (334)
T cd05100          87 CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ  153 (334)
T ss_pred             EccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999999999885421            1223578889999999999999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.74  E-value=5.2e-17  Score=111.29  Aligned_cols=118  Identities=32%  Similarity=0.458  Sum_probs=98.2

Q ss_pred             hhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEE-eCCeEEEEEe
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS-EGSKRALVYE  105 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e  105 (148)
                      +..++|++.+.||+|+||.||++... +..+++|.+.... ....+.+|+.++..++|++++++++.+. ..+..++++|
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (256)
T cd05082           3 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   80 (256)
T ss_pred             ccHHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEE
Confidence            34568899999999999999999765 7789999886432 3456889999999999999999998754 4567899999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++++|.+++...  ....+++..+..++.|++.||+|||++
T Consensus        81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~  121 (256)
T cd05082          81 YMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEAN  121 (256)
T ss_pred             CCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999988432  233578999999999999999999974

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.74  E-value=6.9e-17  Score=110.19  Aligned_cols=114  Identities=25%  Similarity=0.336  Sum_probs=99.0

Q ss_pred             CceeecccccccceEEEEEEec-CCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeC--CeEEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEG--SKRALVY  104 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv~  104 (148)
                      +|...+.||+|++|.||.|... ++..+++|.+.....   ....+.+|+..+++++||||+++++.+...  +..++++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            4678889999999999999964 788999999876543   245588999999999999999999999888  8899999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |++.+++|.+++.    ....+++..++.++.|++.||.|||++
T Consensus        81 e~~~~~~L~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lh~~  120 (260)
T cd06606          81 EYVSGGSLSSLLK----KFGKLPEPVIRKYTRQILEGLAYLHSN  120 (260)
T ss_pred             EecCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999883    333789999999999999999999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=8.5e-17  Score=109.73  Aligned_cols=114  Identities=25%  Similarity=0.427  Sum_probs=99.7

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +|.+.+.||+|++|.||.+.. .++..+++|.+.....   ....+.+|+.++..++||+++++.+++...+..++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            478889999999999999985 4678999999877554   234588999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+++|.+++.    ....+++..++.++.|++.||.|||++
T Consensus        81 ~~~~~L~~~~~----~~~~l~~~~~~~~~~~i~~~l~~lH~~  118 (254)
T cd06627          81 AENGSLRQIIK----KFGPFPESLVAVYVYQVLQGLAYLHEQ  118 (254)
T ss_pred             CCCCcHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            99999999883    335689999999999999999999974

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.74  E-value=3.6e-17  Score=112.43  Aligned_cols=114  Identities=23%  Similarity=0.343  Sum_probs=99.2

Q ss_pred             CceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      +|+..+.||+|++|.||++... +++.+++|.+......  ...+.+|+..++.++||||+++++.+...+..++++||+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            6788899999999999999864 6889999998764332  345789999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      .+++|.+++...   ...+++..+..++.|++.||.|||+
T Consensus        82 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~  118 (265)
T cd06605          82 DGGSLDKILKEV---QGRIPERILGKIAVAVLKGLTYLHE  118 (265)
T ss_pred             CCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHcC
Confidence            999999988432   2668999999999999999999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.74  E-value=4e-17  Score=113.38  Aligned_cols=115  Identities=21%  Similarity=0.352  Sum_probs=97.0

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +|+..+.||+|++|.||+|.. .++..+++|.+......   ...+.+|+.++..++||||+++++.+...+..+++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            478899999999999999985 47889999988653322   24578899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +. ++|.+++...  ....+++..+..++.|++.||+|||++
T Consensus        81 ~~-~~l~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~  119 (284)
T cd07860          81 LH-QDLKKFMDAS--PLSGIPLPLIKSYLFQLLQGLAFCHSH  119 (284)
T ss_pred             cc-cCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            96 5888877432  235689999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.74  E-value=6.6e-17  Score=111.49  Aligned_cols=117  Identities=29%  Similarity=0.461  Sum_probs=94.5

Q ss_pred             ceeecccccccceEEEEEEec----CCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCe-----
Q 041447           32 LDLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSK-----   99 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~~----~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-----   99 (148)
                      |++.+.||+|+||.||.|...    .+..+|+|.+......   ...+.+|+..+..++||||+++++.+.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            467889999999999999843    2467999998764433   2357889999999999999999998765443     


Q ss_pred             -EEEEEeccCCCChhhcccccC--CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 -RALVYEYMPNGSLDRHIFPNE--GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 -~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                       .++++||+++|+|..++....  .....+++..+..++.|++.||+|||++
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~  132 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR  132 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC
Confidence             789999999999988774321  1234689999999999999999999974

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.74  E-value=2.9e-17  Score=112.42  Aligned_cols=115  Identities=30%  Similarity=0.444  Sum_probs=96.4

Q ss_pred             hcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccC
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      .++|++.+.||+|+||.||.+.. +++.+++|.+.... ....+.+|+.++..++|||++++++.+... ..+++|||++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~   81 (254)
T cd05083           5 LQKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS   81 (254)
T ss_pred             HHHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence            35789999999999999999875 47789999886532 345688999999999999999999988654 4789999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        82 ~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~  119 (254)
T cd05083          82 KGNLVNFLRTR--GRALVSVIQLLQFSLDVAEGMEYLESK  119 (254)
T ss_pred             CCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999988432  233578999999999999999999974

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.73  E-value=9.7e-17  Score=115.21  Aligned_cols=112  Identities=13%  Similarity=0.209  Sum_probs=94.7

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ...+|.+.+.||+|+||.||+|... ++..+|+|.....     ....|+.++..++||||+++++++...+..++++|+
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  138 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH  138 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence            3457999999999999999999964 6778999975432     234688899999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+ +|.+++..   ....+++..+..++.|++.||.|||++
T Consensus       139 ~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~  176 (357)
T PHA03209        139 YSS-DLYTYLTK---RSRPLPIDQALIIEKQILEGLRYLHAQ  176 (357)
T ss_pred             cCC-cHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            964 88887732   345689999999999999999999974

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.73  E-value=4.4e-17  Score=114.95  Aligned_cols=124  Identities=26%  Similarity=0.410  Sum_probs=100.0

Q ss_pred             HHhhhcCceeecccccccceEEEEEEec--------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCcccceeeE
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQLH--------TGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQLLGF   93 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~--------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~~~~   93 (148)
                      +....++|.+.+.||+|+||.||.+...        ....+|+|.+......  ...+.+|+..+..+ +||||++++++
T Consensus         7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~   86 (314)
T cd05099           7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGV   86 (314)
T ss_pred             ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence            3455668899999999999999999731        2457899988753322  23477899999999 59999999999


Q ss_pred             EEeCCeEEEEEeccCCCChhhcccccCC------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           94 YSEGSKRALVYEYMPNGSLDRHIFPNEG------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        94 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +...+..++++||+++|+|.+++.....            ....+++..+..++.|++.||.|||++
T Consensus        87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~  153 (314)
T cd05099          87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR  153 (314)
T ss_pred             EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC
Confidence            9988899999999999999998854211            124588999999999999999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.73  E-value=5.9e-17  Score=111.31  Aligned_cols=107  Identities=20%  Similarity=0.232  Sum_probs=92.7

Q ss_pred             cccccceEEEEEEec-CCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCCh
Q 041447           38 SGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL  112 (148)
Q Consensus        38 lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L  112 (148)
                      ||.|++|.||.+... ++..+++|.+......    ...+.+|+.++..++||||+++.+.+.+.+..++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            589999999999964 6889999998764322    34588899999999999999999999999999999999999999


Q ss_pred             hhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          113 DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       113 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++.    ....+++..+..++.|++.||+|||++
T Consensus        81 ~~~l~----~~~~l~~~~~~~~~~~i~~~l~~lH~~  112 (262)
T cd05572          81 WTILR----DRGLFDEYTARFYIACVVLAFEYLHNR  112 (262)
T ss_pred             HHHHh----hcCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            99983    334589999999999999999999974

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.73  E-value=4.3e-17  Score=113.21  Aligned_cols=121  Identities=25%  Similarity=0.458  Sum_probs=99.3

Q ss_pred             hhcCceeecccccccceEEEEEEe------cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      ...++.+.+.||+|+||.||.+..      .++..+++|.+..... ....+.+|+..+..++||||+++++.+...+..
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (280)
T cd05092           3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPL   82 (280)
T ss_pred             ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCce
Confidence            356788999999999999999962      2456788888765433 244588999999999999999999999998999


Q ss_pred             EEEEeccCCCChhhcccccCC-----------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEG-----------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++||+++++|.+++.....           ....+++..+..++.|++.||+|||++
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~  141 (280)
T cd05092          83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL  141 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999998854321           113578999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.73  E-value=1.1e-16  Score=112.71  Aligned_cols=117  Identities=21%  Similarity=0.320  Sum_probs=95.7

Q ss_pred             CceeecccccccceEEEEEEe-c--CCCEEEEEEccCCC----cCHHHHHHHHHHHhcCCCCcccceeeEEEeC--CeEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-H--TGGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEG--SKRA  101 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~--~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~  101 (148)
                      +|.+.+.||+|++|.||+|.. .  ++..+|+|.+....    .......+|+.++..++||||+++++.+...  ...+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            478889999999999999995 3  57899999987632    1234577899999999999999999999887  8899


Q ss_pred             EEEeccCCCChhhcccccCCC-CCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGR-GKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||||+.+ ++.+.+...... ...+++..++.++.|++.||.|||++
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  127 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN  127 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999976 676665432222 23689999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=8.7e-19  Score=124.30  Aligned_cols=115  Identities=22%  Similarity=0.352  Sum_probs=101.7

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ..|...+.||+|+||.||+|.. .+++.||+|+++.....  -++..+|+.++.+++++||.++++.|..+..++++|||
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            4567778999999999999995 57999999999875443  35688999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |.||++.+.+    .....+.+..+.-++++++.|+.|||.+
T Consensus        93 ~~gGsv~~lL----~~~~~~~E~~i~~ilre~l~~l~ylH~~  130 (467)
T KOG0201|consen   93 CGGGSVLDLL----KSGNILDEFEIAVILREVLKGLDYLHSE  130 (467)
T ss_pred             hcCcchhhhh----ccCCCCccceeeeehHHHHHHhhhhhhc
Confidence            9999999998    5556668999999999999999999974

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.73  E-value=3e-17  Score=112.13  Aligned_cols=118  Identities=24%  Similarity=0.428  Sum_probs=100.0

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +|++.+.+|+|++|.||++.. .++..+++|.+......   ...+.+|+.+++.++||||+++.+.+......++++||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            478899999999999999985 47889999998764332   33477899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++.........+++..++.++.|++.||+|||++
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~  122 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ  122 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            999999998854323345689999999999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.73  E-value=7.1e-17  Score=112.61  Aligned_cols=118  Identities=26%  Similarity=0.386  Sum_probs=95.6

Q ss_pred             CceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      +|++.+.||+|+||.||+|...      ....+++|.+......  ...+.+|+..+..++||||+++++.+...+..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            4678899999999999999732      2346888887653322  3457889999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccC--------------------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNE--------------------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~--------------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||+.+|+|.+++....                    .....+++..++.++.|++.||.|||++
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~  146 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM  146 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999998874321                    1124578999999999999999999974

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.73  E-value=7.2e-17  Score=112.65  Aligned_cols=118  Identities=21%  Similarity=0.327  Sum_probs=96.1

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCC-CCcccceeeEEEeCCe-----
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIH-HVNVVQLLGFYSEGSK-----   99 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~-----   99 (148)
                      ++|++.+.||+|+||.||++.. .++..+|+|.+......   ...+.+|+.++..++ ||||+++++.+...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            3688999999999999999985 47889999987654322   345778999999995 6999999998876655     


Q ss_pred             EEEEEeccCCCChhhcccccCCC-CCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGR-GKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++|||+++ +|.+++...... ...+++..++.++.||+.||.|||++
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~  129 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH  129 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            8999999986 888877543222 35689999999999999999999974

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.73  E-value=8.6e-17  Score=110.10  Aligned_cols=116  Identities=20%  Similarity=0.256  Sum_probs=96.7

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEe-CCeEEEEEe
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSE-GSKRALVYE  105 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e  105 (148)
                      +|++.+.+|+|++|.||.+.. .+++.+++|.+......   .+.+.+|+.+++.++|||++++.+.+.. .+..++++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            588999999999999999985 46788999998654332   3357789999999999999999988764 446889999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++++|.+++...  ....+++.++..++.|++.|+++||++
T Consensus        81 ~~~~~~l~~~l~~~--~~~~l~~~~~~~~~~~l~~~l~~lH~~  121 (257)
T cd08223          81 FCEGGDLYHKLKEQ--KGKLLPENQVVEWFVQIAMALQYLHEK  121 (257)
T ss_pred             ccCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999988432  234589999999999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.73  E-value=1.1e-16  Score=111.81  Aligned_cols=116  Identities=23%  Similarity=0.312  Sum_probs=96.6

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++|++.+.||+|++|.||++.. .++..+++|.+......   ...+.+|+.+++.++||||+++++.+...+..++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            4789999999999999999985 47889999998654322   2457789999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++ +|.+++...  ....+++..+..++.|++.||+|||++
T Consensus        82 ~~~~-~l~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~  121 (294)
T PLN00009         82 YLDL-DLKKHMDSS--PDFAKNPRLIKTYLYQILRGIAYCHSH  121 (294)
T ss_pred             cccc-cHHHHHHhC--CCCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence            9965 787776322  223367889999999999999999974

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.73  E-value=9.1e-17  Score=112.06  Aligned_cols=115  Identities=22%  Similarity=0.334  Sum_probs=95.8

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .+|.+.+.||+|+||.||.|.. .++..+++|.+......  ...+.+|+.++..++|+||+++.+++...+..++++||
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY   84 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence            5789999999999999999985 46889999998654322  23567899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +. +++.+++..   ....+++..+..++.|++.||.|||++
T Consensus        85 ~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~  122 (291)
T cd07870          85 MH-TDLAQYMIQ---HPGGLHPYNVRLFMFQLLRGLAYIHGQ  122 (291)
T ss_pred             cc-CCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            96 577766632   224578888999999999999999974

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.73  E-value=6e-17  Score=113.41  Aligned_cols=119  Identities=24%  Similarity=0.400  Sum_probs=96.4

Q ss_pred             cCceeecccccccceEEEEEEec-CCC--EEEEEEccCCCc--CHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGG--LIAVKMLENSNF--SAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~--~~avk~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      ++|++.+.||+|+||.||+|... ++.  .+++|.+.....  ..+.+.+|+.++.++ +||||+++++.+...+..+++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            57899999999999999999853 332  467887764222  234578899999999 699999999999998999999


Q ss_pred             EeccCCCChhhcccccCC------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEG------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||+++++|.+++.....            ....+++..+..++.|++.||+|||++
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~  138 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK  138 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999998843211            123588999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.73  E-value=7.2e-17  Score=111.28  Aligned_cols=113  Identities=24%  Similarity=0.287  Sum_probs=94.6

Q ss_pred             eeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCC
Q 041447           33 DLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNG  110 (148)
Q Consensus        33 ~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g  110 (148)
                      .....||+|+||.||++.. .++..+++|.+..... ..+.+.+|+.++..++||||+++++.+...+..++++||++++
T Consensus        11 ~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   90 (268)
T cd06624          11 GERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGG   90 (268)
T ss_pred             CceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCC
Confidence            3446789999999999985 4677899998876443 3445889999999999999999999999999999999999999


Q ss_pred             ChhhcccccCCCCCCC--CHHHHHHHHHHHHHHHhhhhcC
Q 041447          111 SLDRHIFPNEGRGKSF--SWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       111 ~L~~~l~~~~~~~~~~--~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|.+++..+   ...+  ++..+..++.|++.||+|||++
T Consensus        91 ~L~~~l~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~  127 (268)
T cd06624          91 SLSALLRSK---WGPLKDNEQTIIFYTKQILEGLKYLHDN  127 (268)
T ss_pred             CHHHHHHHh---cccCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence            999988432   1234  7888899999999999999964

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.73  E-value=9.2e-17  Score=109.66  Aligned_cols=110  Identities=30%  Similarity=0.472  Sum_probs=94.9

Q ss_pred             cccccccceEEEEEEecCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCChh
Q 041447           36 WSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD  113 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~  113 (148)
                      +.||+|++|.||.+...+++.+++|.+......  ...+.+|+.++.+++||||+++++.+...+..++++||+.+++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            368999999999999655899999988764443  345889999999999999999999999999999999999999999


Q ss_pred             hcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          114 RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       114 ~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++..   ....++...+..++.|++.||.|||++
T Consensus        81 ~~l~~---~~~~~~~~~~~~~~~~~~~~l~~lH~~  112 (251)
T cd05041          81 TFLRK---KKNRLTVKKLLQMSLDAAAGMEYLESK  112 (251)
T ss_pred             HHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            98843   234578999999999999999999974

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.73  E-value=7.7e-17  Score=111.75  Aligned_cols=109  Identities=27%  Similarity=0.348  Sum_probs=91.8

Q ss_pred             cccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCCh
Q 041447           38 SGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL  112 (148)
Q Consensus        38 lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L  112 (148)
                      ||+|+||.||.+.. .++..+++|.+.....    ....+..|+.+++.++||||+++.+.+...+..++++||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            58999999999985 4788999998865322    123467899999999999999999999999999999999999999


Q ss_pred             hhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          113 DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       113 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++...  ....+++..+..++.|++.||.|||++
T Consensus        81 ~~~l~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~  114 (277)
T cd05577          81 KYHIYNV--GEPGFPEARAIFYAAQIICGLEHLHQR  114 (277)
T ss_pred             HHHHHHc--CcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9888432  123689999999999999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.73  E-value=9.6e-17  Score=110.25  Aligned_cols=108  Identities=22%  Similarity=0.379  Sum_probs=89.3

Q ss_pred             ccccccceEEEEEEec---CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCC
Q 041447           37 SSGKDGFGSVYKGQLH---TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGS  111 (148)
Q Consensus        37 ~lg~g~~~~v~~~~~~---~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~  111 (148)
                      .||+|+||.||.|...   ++..+|+|.+......  .+.+.+|+.++.+++||||+++++.+. ....+++|||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            3799999999999742   4557899988764332  345889999999999999999999875 456889999999999


Q ss_pred             hhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          112 LDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       112 L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |.+++..   ....+++..++.++.|++.||.|||++
T Consensus        81 L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~  114 (257)
T cd05115          81 LNKFLSG---KKDEITVSNVVELMHQVSMGMKYLEGK  114 (257)
T ss_pred             HHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            9998842   235689999999999999999999974

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.73  E-value=3.2e-17  Score=113.89  Aligned_cols=114  Identities=18%  Similarity=0.321  Sum_probs=96.2

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +|++.+.||+|+||.||++.. .+|..+++|.+......   ...+.+|+.++..++||||+++++.+.+.+..++++||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            478889999999999999996 47889999998653322   23467899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+ +|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        81 ~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~  118 (284)
T cd07839          81 CDQ-DLKKYFDS---CNGDIDPEIVKSFMFQLLKGLAFCHSH  118 (284)
T ss_pred             CCC-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            975 78777632   235589999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.73  E-value=6.6e-17  Score=111.59  Aligned_cols=117  Identities=23%  Similarity=0.342  Sum_probs=95.3

Q ss_pred             hhcCceeecccccccceEEEEEEecC----CCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLHT----GGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~~----~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      ..++|.+.+.||+|+||.||+|...+    ...+++|.......  ..+.+.+|+.+++.++||||+++++.+.+ +..+
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~   82 (270)
T cd05056           4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW   82 (270)
T ss_pred             chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence            34578899999999999999998432    34688898765432  23458889999999999999999998765 4578


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|||+++|+|.+++..   ....+++..+..++.|++.||+|||++
T Consensus        83 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~  126 (270)
T cd05056          83 IVMELAPLGELRSYLQV---NKYSLDLASLILYSYQLSTALAYLESK  126 (270)
T ss_pred             EEEEcCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999843   233589999999999999999999974

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.73  E-value=4.5e-17  Score=129.64  Aligned_cols=107  Identities=26%  Similarity=0.507  Sum_probs=92.3

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      .+...+.+|+|+||.||+|.. .++..+|+|.+.......   ..|+..+.+++||||+++++++.+.+..++||||+++
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~  767 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP---SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEG  767 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcccc---HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCC
Confidence            466678899999999999985 578899999886533222   3467889999999999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |+|.+++.       .+++..+..++.|++.||+|||+
T Consensus       768 g~L~~~l~-------~l~~~~~~~i~~~ia~~L~yLH~  798 (968)
T PLN00113        768 KNLSEVLR-------NLSWERRRKIAIGIAKALRFLHC  798 (968)
T ss_pred             CcHHHHHh-------cCCHHHHHHHHHHHHHHHHHhcc
Confidence            99999982       37899999999999999999994

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.73  E-value=7.5e-17  Score=111.20  Aligned_cols=117  Identities=22%  Similarity=0.375  Sum_probs=95.0

Q ss_pred             CceeecccccccceEEEEEEec--CCCEEEEEEccCCCc-----------CHHHHHHHHHHHhc-CCCCcccceeeEEEe
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLH--TGGLIAVKMLENSNF-----------SAVEFINEVSTIGR-IHHVNVVQLLGFYSE   96 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~avk~~~~~~~-----------~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~   96 (148)
                      +|++.+.||+|+||.||.+...  ++..+++|.+.....           ...++.+|+.++.+ ++||||+++++.+..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            4778899999999999999954  477899998754211           12236678877764 689999999999999


Q ss_pred             CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           97 GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        97 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      .+..++++||+++++|.+++.........+++..++.++.|++.||.|||+
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~  131 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK  131 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999988774322334568999999999999999999995

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.73  E-value=7.3e-17  Score=110.53  Aligned_cols=110  Identities=26%  Similarity=0.398  Sum_probs=92.3

Q ss_pred             cccccccceEEEEEEec--CC--CEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQLH--TG--GLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~--~~--~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|++|.||++...  .+  ..+|+|.+.....  ....+.+|+..+++++||||+++++.+.. ...++++||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            36799999999999853  23  3689999977554  24458899999999999999999999888 889999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|.+++.....  ..+++..++.++.|++.||+|||++
T Consensus        80 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~  116 (257)
T cd05040          80 GSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESK  116 (257)
T ss_pred             CcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhC
Confidence            999998844221  4689999999999999999999974

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.73  E-value=1.4e-17  Score=114.30  Aligned_cols=110  Identities=25%  Similarity=0.335  Sum_probs=90.0

Q ss_pred             cccccccceEEEEEEec-C-------CCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           36 WSSGKDGFGSVYKGQLH-T-------GGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~-~-------~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +.||+|+||.||+|... .       ...+++|.+...... .+.+..|+.++..++||||+++++.+..++..+++|||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            46899999999999743 2       234777777553322 34577889999999999999999999998899999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|+|.+++..+   ...+++..+..++.|++.||+|||+.
T Consensus        81 ~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~  119 (258)
T cd05078          81 VKFGSLDTYLKKN---KNLINISWKLEVAKQLAWALHFLEDK  119 (258)
T ss_pred             CCCCcHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999998432   33578999999999999999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=9.7e-17  Score=111.08  Aligned_cols=113  Identities=19%  Similarity=0.352  Sum_probs=96.5

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCC---CCcccceeeEEEeCCeEEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIH---HVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      .|+..+.||+|+||.||+|.. .++..+++|.++....  ....+.+|+.+++.++   |||++++++.+......+++|
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            467788899999999999995 5788999999865432  2345778888888886   999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++++|.+++.    . ..+++..++.++.|++.||.|||++
T Consensus        82 e~~~~~~L~~~~~----~-~~l~~~~~~~i~~~i~~~l~~lh~~  120 (277)
T cd06917          82 EYAEGGSVRTLMK----A-GPIAEKYISVIIREVLVALKYIHKV  120 (277)
T ss_pred             ecCCCCcHHHHHH----c-cCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999998872    2 3689999999999999999999974

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.72  E-value=1e-16  Score=109.97  Aligned_cols=108  Identities=31%  Similarity=0.464  Sum_probs=90.0

Q ss_pred             cccccccceEEEEEEe-cC---CCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQL-HT---GGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~---~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||+|.. .+   +..+++|.+.....  ....+.+|+.+++.+.||||+++++.+. .+..+++|||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            3689999999999974 22   36899999876554  3445889999999999999999999765 4567899999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|.+++.    ....+++..+..++.|++.||+|||++
T Consensus        80 ~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lh~~  114 (257)
T cd05060          80 GPLLKYLK----KRREIPVSDLKELAHQVAMGMAYLESK  114 (257)
T ss_pred             CcHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            99999983    334689999999999999999999974

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.72  E-value=4.5e-18  Score=125.08  Aligned_cols=112  Identities=17%  Similarity=0.279  Sum_probs=93.5

Q ss_pred             eeecccccccceEEEEEEe-cCCCEEEEEEccC-----CCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCe--EEEEE
Q 041447           33 DLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLEN-----SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSK--RALVY  104 (148)
Q Consensus        33 ~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~-----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~lv~  104 (148)
                      ++.++||+|+|.+||+|.. .+|-.||.-.++.     .....+++..|+.+|+.|+||||++++..|.+...  +.+|+
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT  122 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT  122 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence            4678999999999999995 3677777544322     22223679999999999999999999999987655  77999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |.+..|+|..|+    ...+.++...+..+++||++||.|||++
T Consensus       123 EL~TSGtLr~Y~----kk~~~vn~kaik~W~RQILkGL~yLHs~  162 (632)
T KOG0584|consen  123 ELFTSGTLREYR----KKHRRVNIKAIKSWCRQILKGLVYLHSQ  162 (632)
T ss_pred             ecccCCcHHHHH----HHhccCCHHHHHHHHHHHHHHhhhhhcC
Confidence            999999999999    4556788999999999999999999985

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.72  E-value=2.7e-17  Score=112.86  Aligned_cols=118  Identities=21%  Similarity=0.311  Sum_probs=93.9

Q ss_pred             CceeecccccccceEEEEEEec-CCCEEEEEEccC---CCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLEN---SNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~---~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      +|.+.+.||+|+||.||.+... .+...++|.+..   ...   ....+..|+.++..++||||+++++.+.+....+++
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            4788899999999999999853 344444554432   111   233466788899999999999999999988899999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||+++++|.+++.........+++..++.++.|++.||.|||++
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~  125 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR  125 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999988754333456789999999999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.72  E-value=1.2e-16  Score=114.65  Aligned_cols=114  Identities=22%  Similarity=0.217  Sum_probs=93.4

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCC-----
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGS-----   98 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----   98 (148)
                      ..++|.+.+.||+|+||.||.+.. .++..+|+|.+.....   ....+.+|+.++..++||||+++++++....     
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            346899999999999999999985 4688999999865332   2345778999999999999999999886543     


Q ss_pred             -eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 -KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                       ..+++|||+.+ ++.+.+.      ..+++..+..++.|++.||.|||++
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~  142 (359)
T cd07876          99 QDVYLVMELMDA-NLCQVIH------MELDHERMSYLLYQMLCGIKHLHSA  142 (359)
T ss_pred             ceeEEEEeCCCc-CHHHHHh------ccCCHHHHHHHHHHHHHHHHHHHhC
Confidence             47899999976 6666551      2378899999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.72  E-value=7.6e-17  Score=111.92  Aligned_cols=118  Identities=24%  Similarity=0.392  Sum_probs=97.9

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcC-CCCcccceeeEEEe------CCeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSE------GSKR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~------~~~~  100 (148)
                      ...|++.+.+|+|+||.||.+.. .++..+++|.+.........+..|+.++..+ +||||+++++.+..      ....
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   94 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL   94 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence            35788889999999999999995 5688999999876554555678888888888 69999999998853      4578


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|||+.+|+|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        95 ~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~  140 (282)
T cd06636          95 WLVMEFCGAGSVTDLVKNT--KGNALKEDWIAYICREILRGLAHLHAH  140 (282)
T ss_pred             EEEEEeCCCCcHHHHHHHc--cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999999888432  234578899999999999999999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.72  E-value=6.7e-17  Score=113.29  Aligned_cols=113  Identities=24%  Similarity=0.332  Sum_probs=95.8

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccC
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      .|.....||+|+||.||.+.. .++..+++|.+..... ....+.+|+..+..++|||++++++.+...+..++++||++
T Consensus        22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~  101 (297)
T cd06659          22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQ  101 (297)
T ss_pred             hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCC
Confidence            345556789999999999985 4688999999865333 34457889999999999999999999999999999999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|..++.     ...+++..++.++.|++.||.|||++
T Consensus       102 ~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~L~~LH~~  136 (297)
T cd06659         102 GGALTDIVS-----QTRLNEEQIATVCESVLQALCYLHSQ  136 (297)
T ss_pred             CCCHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999988762     24578999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.72  E-value=6.8e-17  Score=112.22  Aligned_cols=120  Identities=24%  Similarity=0.399  Sum_probs=97.7

Q ss_pred             hcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      ..+|.+.+.||+|+||.||+|...      ++..+|+|.+......  ...+.+|+.++..++||||+++++.+...+..
T Consensus         4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~   83 (283)
T cd05091           4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL   83 (283)
T ss_pred             HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence            345788899999999999999742      3568999998754332  24477899999999999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccC------------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNE------------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++||+.+++|.+++....            .....+++..+..++.|++.||+|||++
T Consensus        84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~  143 (283)
T cd05091          84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH  143 (283)
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc
Confidence            99999999999998874211            1124578899999999999999999974

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.72  E-value=5.1e-17  Score=111.38  Aligned_cols=107  Identities=21%  Similarity=0.355  Sum_probs=92.4

Q ss_pred             cccccceEEEEEEec-CCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCCh
Q 041447           38 SGKDGFGSVYKGQLH-TGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL  112 (148)
Q Consensus        38 lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L  112 (148)
                      ||.|+||.||.+... +++.+++|.+.....    ....+.+|+..+..++||||+++++.+......++++||+.+++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            589999999999964 588999999866433    234577889999999999999999999999999999999999999


Q ss_pred             hhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          113 DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       113 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++.    ....+++..+..++.|++.||+|||++
T Consensus        81 ~~~l~----~~~~~~~~~~~~i~~qi~~~L~~lH~~  112 (265)
T cd05579          81 ASLLE----NVGSLDEDVARIYIAEIVLALEYLHSN  112 (265)
T ss_pred             HHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            99883    334689999999999999999999974

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.72  E-value=5e-17  Score=113.67  Aligned_cols=112  Identities=29%  Similarity=0.406  Sum_probs=94.8

Q ss_pred             ceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           32 LDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      |.....||+|+||.||.+.. .++..+|+|.+...... ...+.+|+..+..++||||+++++.+...+..+++|||+++
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~  103 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG  103 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence            34456689999999999985 46889999988654332 34578999999999999999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|.+++.     .+.+++..+..++.|++.||+|||++
T Consensus       104 ~~L~~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~  137 (292)
T cd06658         104 GALTDIVT-----HTRMNEEQIATVCLSVLRALSYLHNQ  137 (292)
T ss_pred             CcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99998772     23478999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.72  E-value=1.6e-16  Score=110.21  Aligned_cols=118  Identities=26%  Similarity=0.385  Sum_probs=96.1

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCC----EEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCe
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGG----LIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~----~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   99 (148)
                      +..++|++.+.||+|+||.||+|.+ .++.    .+|+|.+......  ...+.+|+..+..++||||+.+++.+.. ..
T Consensus         4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~   82 (279)
T cd05109           4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-ST   82 (279)
T ss_pred             cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CC
Confidence            3456889999999999999999984 3444    4799988653322  3457789999999999999999998865 45


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++++||+++|+|.+++..   ....+++..+..++.|++.||+|||++
T Consensus        83 ~~l~~~~~~~g~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~  128 (279)
T cd05109          83 VQLVTQLMPYGCLLDYVRE---NKDRIGSQDLLNWCVQIAKGMSYLEEV  128 (279)
T ss_pred             cEEEEEcCCCCCHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            7799999999999998843   234689999999999999999999974

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.72  E-value=1.1e-16  Score=116.35  Aligned_cols=112  Identities=17%  Similarity=0.188  Sum_probs=95.2

Q ss_pred             hhcCceeecccccccceEEEEEEec---CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH---TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~---~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ...+|.+.+.||+|+||.||.|...   .+..+++|.+...    ....+|+.++..++||||+++++.+......+++|
T Consensus        90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            3457999999999999999999742   4568899987643    23458999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |++. ++|.+++    .....+++..+..++.|++.||.|||++
T Consensus       166 e~~~-~~l~~~l----~~~~~l~~~~~~~i~~ql~~aL~~LH~~  204 (392)
T PHA03207        166 PKYK-CDLFTYV----DRSGPLPLEQAITIQRRLLEALAYLHGR  204 (392)
T ss_pred             hhcC-CCHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9996 4888887    3446689999999999999999999974

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.72  E-value=1.4e-16  Score=109.36  Aligned_cols=107  Identities=24%  Similarity=0.452  Sum_probs=89.5

Q ss_pred             ccccccceEEEEEEe---cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCC
Q 041447           37 SSGKDGFGSVYKGQL---HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNG  110 (148)
Q Consensus        37 ~lg~g~~~~v~~~~~---~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g  110 (148)
                      .||+|+||.||+|..   .++..+|+|+++.....   ...+.+|+.++..++||||+++++.+. ....+++|||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            579999999999963   35778999998654332   345788999999999999999998875 45678999999999


Q ss_pred             ChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          111 SLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       111 ~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|.+++    .....+++..+..++.|++.||+|||++
T Consensus        81 ~L~~~l----~~~~~~~~~~~~~i~~qi~~al~~lH~~  114 (257)
T cd05116          81 PLNKFL----QKNKHVTEKNITELVHQVSMGMKYLEET  114 (257)
T ss_pred             cHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999988    3345689999999999999999999974

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.72  E-value=2e-16  Score=110.27  Aligned_cols=116  Identities=22%  Similarity=0.363  Sum_probs=90.2

Q ss_pred             cCceeecccccccceEEEEEEe-c-CCCEEEEEEccCCCc---CHHHHHHHHHHHhcC---CCCcccceeeEEEe-----
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-H-TGGLIAVKMLENSNF---SAVEFINEVSTIGRI---HHVNVVQLLGFYSE-----   96 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~-~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~-----   96 (148)
                      ++|.+.+.||+|+||.||+|.. . ++..+|+|.+.....   ......+|+..+..+   .||||+++++++..     
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            3688999999999999999985 3 467899998865332   223455677666655   69999999998752     


Q ss_pred             CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           97 GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        97 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ....++++||+.+ +|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        81 ~~~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~  129 (290)
T cd07862          81 ETKLTLVFEHVDQ-DLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSH  129 (290)
T ss_pred             CCcEEEEEccCCC-CHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4568999999974 888887432  234589999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.72  E-value=1.3e-16  Score=110.89  Aligned_cols=116  Identities=27%  Similarity=0.408  Sum_probs=92.5

Q ss_pred             hcCceeecccccccceEEEEEEec-CCC----EEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGG----LIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~----~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      .++|++.+.||+|+||.||+|... ++.    .+++|.+.....  ...++..|+..+..+.||||+++++++. ....+
T Consensus         6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~   84 (279)
T cd05111           6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQ   84 (279)
T ss_pred             HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccE
Confidence            457889999999999999999853 344    477787754322  1234667777889999999999999865 45577


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++||+++|+|.+++..   ....+++..+..++.|++.||+|||++
T Consensus        85 ~i~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~  128 (279)
T cd05111          85 LVTQLSPLGSLLDHVRQ---HRDSLDPQRLLNWCVQIAKGMYYLEEH  128 (279)
T ss_pred             EEEEeCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            89999999999999843   235689999999999999999999974

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.72  E-value=1.1e-16  Score=111.82  Aligned_cols=115  Identities=19%  Similarity=0.310  Sum_probs=96.2

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeC--CeEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEG--SKRALV  103 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv  103 (148)
                      ++|++.+.||+|++|.||+|... ++..+++|.++.....   ...+.+|+..+..++||||+++.+.+...  +..+++
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            46888999999999999999964 6889999998754332   22467899999999999999999998877  889999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||+.+ +|.+++..+   ...+++..+..++.|++.||+|||++
T Consensus        85 ~e~~~~-~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~  125 (293)
T cd07843          85 MEYVEH-DLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLHDN  125 (293)
T ss_pred             ehhcCc-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999975 888877332   23589999999999999999999974

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.72  E-value=1.2e-16  Score=111.39  Aligned_cols=114  Identities=19%  Similarity=0.319  Sum_probs=96.0

Q ss_pred             CceeecccccccceEEEEEEe----cCCCEEEEEEccCCCc-----CHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL----HTGGLIAVKMLENSNF-----SAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~----~~~~~~avk~~~~~~~-----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~  100 (148)
                      +|++.+.||+|++|.||.+..    .++..+|+|.+.....     ....+.+|+.++.++ +||+|+.+.+.+......
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            478889999999999999873    2577899998865322     223477899999999 599999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||||+++|+|.+++.    ....+++..+..++.|++.||+|||+.
T Consensus        81 ~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~ql~~~l~~lH~~  124 (288)
T cd05583          81 HLILDYVNGGELFTHLY----QREHFTESEVRVYIAEIVLALDHLHQL  124 (288)
T ss_pred             EEEEecCCCCcHHHHHh----hcCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999999883    345688999999999999999999963

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.71  E-value=3.1e-17  Score=120.24  Aligned_cols=116  Identities=17%  Similarity=0.185  Sum_probs=98.1

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHH---------HHHHHHHHhcCC---CCcccceeeEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVE---------FINEVSTIGRIH---HVNVVQLLGFYS   95 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~---------~~~e~~~l~~l~---~~~i~~~~~~~~   95 (148)
                      ..+|.....+|+|+||+|+.|.++ +..+|++|.|.+.+.-...         ...|+.+|..++   |+||++++++|+
T Consensus       560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE  639 (772)
T KOG1152|consen  560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE  639 (772)
T ss_pred             cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence            356889999999999999999964 5778999998774432211         457899999886   999999999999


Q ss_pred             eCCeEEEEEecc-CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           96 EGSKRALVYEYM-PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        96 ~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++..||+||-. ++-||+++|    .-.+.+++..+..|++|++.|+++||++
T Consensus       640 ddd~yyl~te~hg~gIDLFd~I----E~kp~m~E~eAk~IFkQV~agi~hlh~~  689 (772)
T KOG1152|consen  640 DDDYYYLETEVHGEGIDLFDFI----EFKPRMDEPEAKLIFKQVVAGIKHLHDQ  689 (772)
T ss_pred             cCCeeEEEecCCCCCcchhhhh----hccCccchHHHHHHHHHHHhcccccccc
Confidence            999999999975 346899999    5557799999999999999999999985

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=6.4e-18  Score=124.44  Aligned_cols=113  Identities=22%  Similarity=0.344  Sum_probs=96.0

Q ss_pred             ceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           32 LDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      |.-...||-|+||.||-++. .+...||||.+.-++..    ++++..|+..|.++.|||++.+-|+|......++||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            44556679999999999995 57889999999776553    45688999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |-| +-.+.+.   -..+++.+..+..|..+.+.||+|||++
T Consensus       108 ClG-SAsDlle---VhkKplqEvEIAAi~~gaL~gLaYLHS~  145 (948)
T KOG0577|consen  108 CLG-SASDLLE---VHKKPLQEVEIAAITHGALQGLAYLHSH  145 (948)
T ss_pred             Hhc-cHHHHHH---HHhccchHHHHHHHHHHHHHHHHHHHHh
Confidence            976 6666663   2346789999999999999999999974

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=2e-16  Score=108.60  Aligned_cols=109  Identities=24%  Similarity=0.260  Sum_probs=88.3

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCCcCH----HHHHHHHHH-HhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA----VEFINEVST-IGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~----~~~~~e~~~-l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|++|.||+|.. .+++.+|+|.+.......    .....|... ....+|||++++++.+...+..++++||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            4689999999999985 468899999987643221    123344444 3445799999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|.+++    .....+++..+..++.|++.||.|||++
T Consensus        82 ~~L~~~l----~~~~~~~~~~~~~i~~qi~~aL~~lH~~  116 (260)
T cd05611          82 GDCASLI----KTLGGLPEDWAKQYIAEVVLGVEDLHQR  116 (260)
T ss_pred             CCHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999988    3345689999999999999999999974

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.71  E-value=7.6e-17  Score=115.01  Aligned_cols=118  Identities=22%  Similarity=0.293  Sum_probs=95.6

Q ss_pred             HHHhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeC--
Q 041447           24 LRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEG--   97 (148)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--   97 (148)
                      .+++ .++|.+.+.||+|+||.||.|.. .++..+|+|.+......   ...+.+|+.+++.++||||+++++++...  
T Consensus        10 ~~~~-~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   88 (343)
T cd07878          10 VWEV-PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATS   88 (343)
T ss_pred             Hhhh-hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccc
Confidence            3444 35899999999999999999985 57889999998754322   34467899999999999999999887543  


Q ss_pred             ----CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 ----SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                          ...+++++++ +++|.+++.     ...+++..+..++.|++.||.|||++
T Consensus        89 ~~~~~~~~~~~~~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~  137 (343)
T cd07878          89 IENFNEVYLVTNLM-GADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIHSA  137 (343)
T ss_pred             ccccCcEEEEeecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence                4478999988 668888762     24589999999999999999999974

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.71  E-value=2.7e-16  Score=110.35  Aligned_cols=115  Identities=22%  Similarity=0.358  Sum_probs=93.3

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCC-------
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGS-------   98 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------   98 (148)
                      ++|++.+.||+|+||.||++.. .++..+|+|.+......   ...+.+|+.+++.++||||+++++.+...+       
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            3689999999999999999985 47889999988643221   234568999999999999999999876643       


Q ss_pred             -eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 -KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                       ..++++||+.+ ++.+.+..   ....+++..++.++.|++.||.|||++
T Consensus        92 ~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~  138 (310)
T cd07865          92 GSFYLVFEFCEH-DLAGLLSN---KNVKFTLSEIKKVMKMLLNGLYYIHRN  138 (310)
T ss_pred             ceEEEEEcCCCc-CHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence             35999999975 78777632   234589999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.71  E-value=2.3e-16  Score=111.96  Aligned_cols=111  Identities=23%  Similarity=0.356  Sum_probs=92.3

Q ss_pred             cccccc--cceEEEEEEe-cCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKD--GFGSVYKGQL-HTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g--~~~~v~~~~~-~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      ..||+|  +|++||.+.. .+++.+|+|++.......   +.+.+|+.++..++||||+++++.+...+..++++||+.+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            345555  9999999986 478999999987644332   3477888888889999999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++.+++...  ....+++..+..++.|++.||+|||++
T Consensus        84 ~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~aL~~lH~~  120 (328)
T cd08226          84 GSANSLLKTY--FPEGMSEALIGNILFGALRGLNYLHQN  120 (328)
T ss_pred             CCHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999988432  123589999999999999999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.71  E-value=4.4e-16  Score=105.80  Aligned_cols=115  Identities=27%  Similarity=0.468  Sum_probs=100.2

Q ss_pred             CceeecccccccceEEEEEEec-CCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccC
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      +|...+.||+|++|.||.+... ++..+++|.+..... ....+.+|+..+..++||+++++.+.+......++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            4778899999999999999964 688999999877544 34568899999999999999999999999999999999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|.+++...   ...+++..+..++.|++.||.+||++
T Consensus        81 ~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~  117 (253)
T cd05122          81 GGSLKDLLKST---NQTLTESQIAYVCKELLKGLEYLHSN  117 (253)
T ss_pred             CCcHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhcC
Confidence            99999988332   25689999999999999999999974

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.71  E-value=3.3e-16  Score=108.11  Aligned_cols=116  Identities=24%  Similarity=0.412  Sum_probs=90.9

Q ss_pred             eeecccccccceEEEEEEec-CCC--EEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeC------CeE
Q 041447           33 DLTWSSGKDGFGSVYKGQLH-TGG--LIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEG------SKR  100 (148)
Q Consensus        33 ~~~~~lg~g~~~~v~~~~~~-~~~--~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~~  100 (148)
                      .+.+.||+|+||.||+|... ++.  .+|+|.++.....   ...+.+|+.++..++||||+++++.+...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            46788999999999999854 333  5899988664322   34578899999999999999999876432      346


Q ss_pred             EEEEeccCCCChhhcccccC--CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNE--GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++||+.+|+|.+++....  .....+++..+..++.|++.||+|||++
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  131 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK  131 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC
Confidence            89999999999988774321  1234589999999999999999999974

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.71  E-value=2.5e-16  Score=110.84  Aligned_cols=116  Identities=22%  Similarity=0.348  Sum_probs=95.8

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeC--CeEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEG--SKRAL  102 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~l  102 (148)
                      .++|++.+.||+|+||.||+|.. .++..+|+|.+......   .....+|+.++.+++|+||+++++.+...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            45799999999999999999995 47889999998653322   22356899999999999999999998754  56899


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||+.+ +|.+++..   ....+++..+..++.|++.||.|||++
T Consensus        86 v~e~~~~-~l~~~l~~---~~~~l~~~~~~~~~~qi~~~l~~lH~~  127 (309)
T cd07845          86 VMEYCEQ-DLASLLDN---MPTPFSESQVKCLMLQLLRGLQYLHEN  127 (309)
T ss_pred             EEecCCC-CHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999975 78877732   235689999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.71  E-value=1.8e-16  Score=111.49  Aligned_cols=115  Identities=23%  Similarity=0.337  Sum_probs=96.0

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      +.|...+.||+|+||.||.+.. .++..+++|.+......    ...+.+|+.++..++||||+++.+.+...+..++++
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            4578889999999999999985 46889999988653322    234778999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+ ++.+++..   ....+++..+..++.|++.||.|||++
T Consensus        95 e~~~g-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~L~~LH~~  134 (307)
T cd06607          95 EYCLG-SASDILEV---HKKPLQEVEIAAICHGALQGLAYLHSH  134 (307)
T ss_pred             HhhCC-CHHHHHHH---cccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99975 77666532   234589999999999999999999974

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.71  E-value=2.6e-16  Score=116.27  Aligned_cols=111  Identities=19%  Similarity=0.212  Sum_probs=94.2

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      ..+|.+.+.||+|+||.||++... ++..+|+|...     .....+|+.++..++||||+++++++...+..++++|++
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~  242 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-----YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY  242 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-----ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence            347999999999999999999964 67889999532     223568999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      . ++|.+++..   ....+++..+..++.|++.||.|||++
T Consensus       243 ~-~~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~yLH~~  279 (461)
T PHA03211        243 R-SDLYTYLGA---RLRPLGLAQVTAVARQLLSAIDYIHGE  279 (461)
T ss_pred             C-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            5 588887732   234689999999999999999999974

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.70  E-value=2.9e-16  Score=112.14  Aligned_cols=114  Identities=21%  Similarity=0.315  Sum_probs=94.5

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCC------
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGS------   98 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------   98 (148)
                      .++|++.+.||+|+||.||.+.. .++..+|+|.+......   ...+.+|+.+++.++||||+++.+.+....      
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07880          14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH   93 (343)
T ss_pred             ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence            45799999999999999999984 57889999988653222   335778999999999999999999887643      


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..++++|++ +++|.+++.     ...+++..+..++.|++.||+|||++
T Consensus        94 ~~~lv~e~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~al~~LH~~  137 (343)
T cd07880          94 DFYLVMPFM-GTDLGKLMK-----HEKLSEDRIQFLVYQMLKGLKYIHAA  137 (343)
T ss_pred             eEEEEEecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            358999998 668888772     24589999999999999999999974

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.70  E-value=2.3e-16  Score=110.44  Aligned_cols=116  Identities=25%  Similarity=0.373  Sum_probs=95.4

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCC------
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGS------   98 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------   98 (148)
                      .++|++.+.||+|+||.||+|.. .++..+++|.++....   ....+.+|+.++..++||||+++++.+.+..      
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~   85 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFK   85 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcc
Confidence            45789999999999999999996 4688999999865332   2345678999999999999999999887654      


Q ss_pred             ----eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 ----KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                          ..++++||+++ ++.+.+..   ....+++..+..++.|++.||.|||++
T Consensus        86 ~~~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~  135 (302)
T cd07864          86 KDKGAFYLVFEYMDH-DLMGLLES---GLVHFSEDHIKSFMKQLLEGLNYCHKK  135 (302)
T ss_pred             ccCCcEEEEEcccCc-cHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence                78999999986 67666632   234689999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.70  E-value=1.4e-16  Score=113.24  Aligned_cols=114  Identities=18%  Similarity=0.260  Sum_probs=95.4

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEe----CCeEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSE----GSKRA  101 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~  101 (148)
                      ++|.+.+.||+|++|.||.+.. .++..+++|.+.....   ....+.+|+.++..++||||+++++++..    ....+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            5789999999999999999985 4788999999865322   23457789999999999999999988753    35689


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++||+. ++|.+++    .....+++..+..++.|++.||.|||++
T Consensus        85 lv~e~~~-~~l~~~~----~~~~~~~~~~~~~i~~qi~~aL~~LH~~  126 (334)
T cd07855          85 VVMDLME-SDLHHII----HSDQPLTEEHIRYFLYQLLRGLKYIHSA  126 (334)
T ss_pred             EEEehhh-hhHHHHh----ccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999996 5898888    3345589999999999999999999974

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.70  E-value=3e-16  Score=108.43  Aligned_cols=113  Identities=27%  Similarity=0.432  Sum_probs=91.0

Q ss_pred             cccccccceEEEEEEec-CCC--EEEEEEccCCCc--CHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQLH-TGG--LIAVKMLENSNF--SAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~-~~~--~~avk~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||++... ++.  .+++|.+.....  ....+.+|+.++..+ +||||+++++.+...+..+++|||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            35899999999999853 343  467887764322  234578899999999 799999999999999999999999999


Q ss_pred             CChhhcccccC------------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNE------------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|.+++....            .....+++..+..++.|++.||+|||++
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~  131 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK  131 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999885421            1123578999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.70  E-value=2.2e-16  Score=109.60  Aligned_cols=114  Identities=23%  Similarity=0.326  Sum_probs=95.6

Q ss_pred             ceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           32 LDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      |++.+.||.|++|.||++.. .++..+++|++......   ...+.+|+.++..++|||++++++.+.+.+..++++||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            56778899999999999985 47899999998654322   245778999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      . ++|.+++...  ....+++..+..++.|++.||+|||++
T Consensus        81 ~-~~l~~~~~~~--~~~~~~~~~~~~~~~~i~~~L~~lH~~  118 (283)
T cd07835          81 D-LDLKKYMDSS--PLTGLDPPLIKSYLYQLLQGIAYCHSH  118 (283)
T ss_pred             C-cCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            5 5898887332  123689999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.70  E-value=7.8e-17  Score=118.97  Aligned_cols=115  Identities=21%  Similarity=0.323  Sum_probs=100.8

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-C-----CcccceeeEEEeCCeEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIH-H-----VNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~-----~~i~~~~~~~~~~~~~~lv  103 (148)
                      +|.+.+.||+|+||+|.+|.. .+++.||||+++.......+...|+.+|..++ |     -|+++++++|...++++||
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciV  266 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIV  266 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeee
Confidence            688899999999999999994 58999999999876666667778999998886 3     2999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|.++. +|.++++.+.  ...++...+..++.||+.||.+||+.
T Consensus       267 fELL~~-NLYellK~n~--f~Glsl~~ir~~~~Qil~~L~~L~~l  308 (586)
T KOG0667|consen  267 FELLST-NLYELLKNNK--FRGLSLPLVRKFAQQILTALLFLHEL  308 (586)
T ss_pred             ehhhhh-hHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999977 9999997654  44589999999999999999999963

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.70  E-value=4.7e-16  Score=108.03  Aligned_cols=108  Identities=25%  Similarity=0.350  Sum_probs=86.7

Q ss_pred             ccccccceEEEEEEe-cCCCEEEEEEccCCCcC--H--HHHHHHH---HHHhcCCCCcccceeeEEEeCCeEEEEEeccC
Q 041447           37 SSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS--A--VEFINEV---STIGRIHHVNVVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        37 ~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~--~--~~~~~e~---~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      .||+|+||.||.+.. .+++.+|+|.+......  .  .....|.   ..+....||+|+.+.+.+...+..++++||+.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            379999999999985 46889999998764322  1  1133333   33444579999999999999999999999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|+|.+++    .....+++..+..++.|++.||.|||++
T Consensus        81 g~~L~~~l----~~~~~l~~~~~~~~~~ql~~~l~~lH~~  116 (278)
T cd05606          81 GGDLHYHL----SQHGVFSEAEMRFYAAEIILGLEHMHNR  116 (278)
T ss_pred             CCcHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999887    3445689999999999999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.70  E-value=9.6e-17  Score=110.60  Aligned_cols=112  Identities=26%  Similarity=0.380  Sum_probs=91.7

Q ss_pred             ccccccceEEEEEEec-------CCCEEEEEEccCCC--cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           37 SSGKDGFGSVYKGQLH-------TGGLIAVKMLENSN--FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        37 ~lg~g~~~~v~~~~~~-------~~~~~avk~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .||+|+||.||.+...       .+..+++|.+....  .....+.+|+.++..++||||+++++.+...+..++++||+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            5799999999999843       12578889876533  23446889999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCC---CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEG---RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++|.+++.....   ....+++..+..++.|++.||+|||++
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~  125 (269)
T cd05044          82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM  125 (269)
T ss_pred             CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC
Confidence            99999998854221   224478899999999999999999974

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.70  E-value=3.1e-16  Score=109.73  Aligned_cols=109  Identities=24%  Similarity=0.347  Sum_probs=93.3

Q ss_pred             ecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCCh
Q 041447           35 TWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL  112 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L  112 (148)
                      ...||+|+||.||.+.. .++..+++|.+..... ....+.+|+.+++.++|||++++++.+...+..+++|||+++++|
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence            46679999999999985 5788999998865333 234578899999999999999999999999999999999999999


Q ss_pred             hhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          113 DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       113 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++.     ...+++..+..++.|++.||+|||++
T Consensus       105 ~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~  135 (292)
T cd06657         105 TDIVT-----HTRMNEEQIAAVCLAVLKALSVLHAQ  135 (292)
T ss_pred             HHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            88762     23478999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.70  E-value=3.9e-16  Score=108.28  Aligned_cols=113  Identities=24%  Similarity=0.391  Sum_probs=95.7

Q ss_pred             ceeecccccccceEEEEEEec-CCCEEEEEEccCCC---cCHHHHHHHHHHHhcCCCCcccceeeEEEeC--CeEEEEEe
Q 041447           32 LDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSN---FSAVEFINEVSTIGRIHHVNVVQLLGFYSEG--SKRALVYE  105 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv~e  105 (148)
                      |++.+.||+|++|.||++... ++..+++|.+....   .....+.+|+.++..++|||++++.+.+...  +..++++|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            567889999999999999864 68899999997653   1234577899999999999999999999887  88999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++ +|.+++..   ....+++..++.++.|++.||+|||++
T Consensus        81 ~~~~-~l~~~~~~---~~~~~~~~~~~~i~~~i~~al~~LH~~  119 (287)
T cd07840          81 YMDH-DLTGLLDS---PEVKFTESQIKCYMKQLLEGLQYLHSN  119 (287)
T ss_pred             cccc-cHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9975 88887733   225689999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.70  E-value=2.4e-16  Score=112.13  Aligned_cols=113  Identities=23%  Similarity=0.331  Sum_probs=94.4

Q ss_pred             Cce-eecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH---------------HHHHHHHHHHhcCCCCcccceeeE
Q 041447           31 GLD-LTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA---------------VEFINEVSTIGRIHHVNVVQLLGF   93 (148)
Q Consensus        31 ~~~-~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~---------------~~~~~e~~~l~~l~~~~i~~~~~~   93 (148)
                      +|. +.+.||.|+||.||++.. .++..+|+|.+.......               ..+.+|+.++..++||||++++++
T Consensus         9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   88 (335)
T PTZ00024          9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV   88 (335)
T ss_pred             chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence            444 457799999999999985 468899999886533221               136789999999999999999999


Q ss_pred             EEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        94 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +...+..+++|||+. |+|.+++    .....+++..+..++.|++.||.|||++
T Consensus        89 ~~~~~~~~lv~e~~~-~~l~~~l----~~~~~~~~~~~~~~~~ql~~aL~~LH~~  138 (335)
T PTZ00024         89 YVEGDFINLVMDIMA-SDLKKVV----DRKIRLTESQVKCILLQILNGLNVLHKW  138 (335)
T ss_pred             EecCCcEEEEEeccc-cCHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999997 4898888    3445689999999999999999999974

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.70  E-value=1.6e-17  Score=115.62  Aligned_cols=113  Identities=27%  Similarity=0.418  Sum_probs=91.8

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCC-----eEEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS-----KRALVY  104 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~lv~  104 (148)
                      .|.-.+.+|.|+||.||+|.. .++..+|||..-.....   --+|+.+|+.+.||||+++.-+|....     ...+||
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~---knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl  101 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY---KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL  101 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc---CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence            356778999999999999984 56889999987443322   237899999999999999988876432     245999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ||++. ||.+.++.....++.++.-.+.-++.||..||.|||+
T Consensus       102 eymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~  143 (364)
T KOG0658|consen  102 EYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS  143 (364)
T ss_pred             HhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh
Confidence            99998 9999886443456779999999999999999999996

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.70  E-value=4.8e-16  Score=109.69  Aligned_cols=112  Identities=21%  Similarity=0.342  Sum_probs=89.4

Q ss_pred             ecccccccceEEEEEEec---CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEe--CCeEEEEEeccCC
Q 041447           35 TWSSGKDGFGSVYKGQLH---TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE--GSKRALVYEYMPN  109 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~---~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~  109 (148)
                      +..||+|+||.||+|...   ++..+|+|.+..... .....+|+.++..++||||+++++.+..  ....++++||+.+
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH   84 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence            467899999999999843   567899999875432 3457789999999999999999998854  4568899999865


Q ss_pred             CChhhcccccC-----CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNE-----GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~-----~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                       +|.+++....     .....+++..+..++.|++.||.|||++
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~  127 (317)
T cd07868          85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN  127 (317)
T ss_pred             -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC
Confidence             7877663221     1223589999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.70  E-value=2.2e-17  Score=118.29  Aligned_cols=111  Identities=33%  Similarity=0.526  Sum_probs=91.6

Q ss_pred             hcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHH--HhcCCCCcccceeeEEEeCC----eEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVST--IGRIHHVNVVQLLGFYSEGS----KRAL  102 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~--l~~l~~~~i~~~~~~~~~~~----~~~l  102 (148)
                      ...+++.+.+|+|.||.||+|... ++.||||++....  .+.|.+|-++  +..++|+||+++++.-....    .++|
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~~--kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL  285 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQE--KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL  285 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhcc-CceeEEEecCHHH--HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence            345678899999999999999976 6899999997543  3345555444  55678999999998876554    7899


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |++|.+.|+|.+++..     ..+++....+++..+++||+|||+
T Consensus       286 Vt~fh~kGsL~dyL~~-----ntisw~~~cria~SmarGLa~LHe  325 (534)
T KOG3653|consen  286 VTEFHPKGSLCDYLKA-----NTISWNSLCRIAESMARGLAHLHE  325 (534)
T ss_pred             EeeeccCCcHHHHHHh-----ccccHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999943     458999999999999999999996

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.70  E-value=3.1e-16  Score=111.73  Aligned_cols=114  Identities=20%  Similarity=0.311  Sum_probs=95.0

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeC-----CeE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEG-----SKR  100 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~  100 (148)
                      .+|.+.+.||+|+||.||.+.. .++..+|+|.+.....   ....+.+|+.++..++||||+++.+++...     ...
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            4789999999999999999985 4789999999865322   234567899999999999999999887643     358


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++||+. ++|.+++    .....+++..+..++.|++.||.|||++
T Consensus        85 ~lv~e~~~-~~L~~~~----~~~~~l~~~~~~~i~~qi~~aL~~LH~~  127 (337)
T cd07858          85 YIVYELMD-TDLHQII----RSSQTLSDDHCQYFLYQLLRGLKYIHSA  127 (337)
T ss_pred             EEEEeCCC-CCHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999996 5898887    3445689999999999999999999974

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.69  E-value=1.9e-17  Score=114.56  Aligned_cols=119  Identities=24%  Similarity=0.318  Sum_probs=102.5

Q ss_pred             HhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH----HHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA----VEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      .++-++|.+.++||+|.||+|..|+. .+++.+|+|++++.-.-.    ..-..|-++|+..+||++..+--.|...+.+
T Consensus       164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drl  243 (516)
T KOG0690|consen  164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRL  243 (516)
T ss_pred             eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceE
Confidence            34456889999999999999999984 589999999997743322    2256889999999999999998888999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||||..||.|.-++    +....++++....+-.+|..||.|||++
T Consensus       244 CFVMeyanGGeLf~HL----srer~FsE~RtRFYGaEIvsAL~YLHs~  287 (516)
T KOG0690|consen  244 CFVMEYANGGELFFHL----SRERVFSEDRTRFYGAEIVSALGYLHSR  287 (516)
T ss_pred             EEEEEEccCceEeeeh----hhhhcccchhhhhhhHHHHHHhhhhhhC
Confidence            9999999999999888    5567789999999999999999999975

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.69  E-value=3e-16  Score=112.48  Aligned_cols=113  Identities=20%  Similarity=0.198  Sum_probs=92.8

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeC------C
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEG------S   98 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~   98 (148)
                      .++|.+.+.||+|+||.||.+.. .++..+|+|.+......   ...+.+|+.+++.++||||+++++.+...      .
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   95 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ   95 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence            45899999999999999999985 46889999998754322   34577899999999999999999988643      3


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..+++|||+.+ ++.+.+.      ..+++..+..++.|++.||.|||++
T Consensus        96 ~~~lv~e~~~~-~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~  138 (355)
T cd07874          96 DVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA  138 (355)
T ss_pred             eeEEEhhhhcc-cHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHhC
Confidence            47899999976 6766651      2478899999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.69  E-value=5.3e-16  Score=107.94  Aligned_cols=115  Identities=23%  Similarity=0.395  Sum_probs=89.9

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcC---CCCcccceeeEEEe-----CC
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRI---HHVNVVQLLGFYSE-----GS   98 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~-----~~   98 (148)
                      +|.+.+.||+|+||.||+|.. .+++.+|+|.++....   ......+|+..+..+   +||||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            478889999999999999985 4788999999875322   123455676666554   79999999998764     34


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..++++|++.+ +|.+++...  ....+++..+..++.|++.||+|||++
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~  127 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKV--PPPGLPAETIKDLMRQFLRGLDFLHAN  127 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            58899999985 888877332  234589999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.69  E-value=5.5e-16  Score=108.02  Aligned_cols=113  Identities=24%  Similarity=0.332  Sum_probs=96.3

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccC
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      .|...+.||+|++|.||++.. .++..+++|.+...... ...+.+|+.++..++|||++++++.+...+..++++||+.
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~   99 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE   99 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence            455567899999999999985 47889999988654332 3447889999999999999999999999999999999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|.+++.    . ..+++..+..++.|++.||+|||++
T Consensus       100 ~~~L~~~~~----~-~~~~~~~~~~~~~ql~~~l~~lH~~  134 (285)
T cd06648         100 GGALTDIVT----H-TRMNEEQIATVCLAVLKALSFLHAQ  134 (285)
T ss_pred             CCCHHHHHH----h-CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999883    2 4588999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.69  E-value=4.5e-16  Score=108.21  Aligned_cols=108  Identities=24%  Similarity=0.344  Sum_probs=86.1

Q ss_pred             ccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHH---HhcCCCCcccceeeEEEeCCeEEEEEeccC
Q 041447           37 SSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVST---IGRIHHVNVVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        37 ~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~---l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      .||+|+||.||.+.. .++..+|+|.+......    .....+|..+   +....||+|+.+.+.+...+..+++|||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            379999999999985 46889999988653322    1123344333   333479999999999999999999999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|+|.+++    .....+++..+..++.|++.||+|||++
T Consensus        81 ~~~L~~~i----~~~~~l~~~~~~~i~~qi~~al~~lH~~  116 (279)
T cd05633          81 GGDLHYHL----SQHGVFSEKEMRFYATEIILGLEHMHNR  116 (279)
T ss_pred             CCCHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999888    3345689999999999999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.69  E-value=2.7e-17  Score=123.00  Aligned_cols=126  Identities=24%  Similarity=0.411  Sum_probs=104.8

Q ss_pred             CcHHHHHHhhhcCceeecccccccceEEEEEEec--CCC--EEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceee
Q 041447           19 PSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLH--TGG--LIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLG   92 (148)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~--~~~--~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~   92 (148)
                      +..+....+..+...+.+.||+|.||.|++|.|+  .|+  .||||++......  ..+|.+|+..|.+++|||+++++|
T Consensus        99 p~~~lkclIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyG  178 (1039)
T KOG0199|consen   99 PSIDLKCLIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYG  178 (1039)
T ss_pred             cCCCcceeccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEee
Confidence            3444555556667788899999999999999864  343  6899999775443  567999999999999999999999


Q ss_pred             EEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        93 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +..+ ..+.+|+|.++.|+|.+.++.  .....+.......|+.||+.||.||..
T Consensus       179 vVl~-qp~mMV~ELaplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLes  230 (1039)
T KOG0199|consen  179 VVLD-QPAMMVFELAPLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLES  230 (1039)
T ss_pred             eecc-chhhHHhhhcccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhh
Confidence            9887 668899999999999999855  345678889999999999999999964

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.69  E-value=5e-16  Score=111.69  Aligned_cols=113  Identities=19%  Similarity=0.185  Sum_probs=92.9

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeC------C
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEG------S   98 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~   98 (148)
                      .++|.+.+.||+|+||.||.+.. ..++.+|+|.+.....   ....+.+|+.+++.++||||+++++.+...      .
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            45899999999999999999985 4688999999875332   234577899999999999999999887543      3


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..++||||+.+ +|.+.+.      ..+++..+..++.|++.||.|||++
T Consensus       103 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~  145 (364)
T cd07875         103 DVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA  145 (364)
T ss_pred             eEEEEEeCCCC-CHHHHHH------hcCCHHHHHHHHHHHHHHHHHHhhC
Confidence            57999999976 6777661      2378899999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.69  E-value=3.6e-18  Score=126.81  Aligned_cols=116  Identities=22%  Similarity=0.370  Sum_probs=98.9

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCC-cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN-FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      +.+.++..||.|+||.||++.. .++-..|.|+|.... ...+++..|+++|..+.||+|+++++.|...+.++|+.|||
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC  111 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC  111 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence            4456778899999999999984 456666788886533 34567999999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .||-....+.   .-...+.++++..+..|++.||.|||++
T Consensus       112 ~GGAVDaiml---EL~r~LtE~QIqvvc~q~ldALn~LHs~  149 (1187)
T KOG0579|consen  112 GGGAVDAIML---ELGRVLTEDQIQVVCYQVLDALNWLHSQ  149 (1187)
T ss_pred             CCchHhHHHH---HhccccchHHHHHHHHHHHHHHHHHhhc
Confidence            9999888773   3456799999999999999999999985

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.69  E-value=6.5e-16  Score=107.08  Aligned_cols=113  Identities=21%  Similarity=0.341  Sum_probs=92.6

Q ss_pred             ceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCC-CCcccceeeEEEeC--CeEEEEEe
Q 041447           32 LDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIH-HVNVVQLLGFYSEG--SKRALVYE  105 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~--~~~~lv~e  105 (148)
                      |++.+.+|+|+||.||++.. .++..+|+|.+.....  ......+|+..+.++. |||++++++.+.+.  +..++++|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            56788999999999999985 4688999998876422  2233557888888885 99999999999887  88999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+.+ ++.+.+..   ....+++..+..++.|++.||+|||++
T Consensus        81 ~~~~-~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~LH~~  119 (282)
T cd07831          81 LMDM-NLYELIKG---RKRPLPEKRVKSYMYQLLKSLDHMHRN  119 (282)
T ss_pred             cCCc-cHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9975 78777732   234689999999999999999999974

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.69  E-value=2.7e-16  Score=107.17  Aligned_cols=107  Identities=32%  Similarity=0.424  Sum_probs=92.6

Q ss_pred             cccccceEEEEEEec-CCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCCh
Q 041447           38 SGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL  112 (148)
Q Consensus        38 lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L  112 (148)
                      ||+|+||.||.+... ++..+++|.+......    ...+..|+.+++.++||||+++++.+..++..+++||++++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            589999999999864 6889999998764332    23578899999999999999999999999999999999999999


Q ss_pred             hhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          113 DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       113 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++    .....+++..+..++.|++.||.|||++
T Consensus        81 ~~~l----~~~~~l~~~~~~~~~~qi~~~l~~lh~~  112 (250)
T cd05123          81 FSHL----SKEGRFSEERARFYAAEIVLALEYLHSL  112 (250)
T ss_pred             HHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9988    3344689999999999999999999974

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.69  E-value=5.9e-16  Score=106.96  Aligned_cols=111  Identities=17%  Similarity=0.201  Sum_probs=88.2

Q ss_pred             cCceeeccc--ccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhc-CCCCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSS--GKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGR-IHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~l--g~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++|.+.+.+  |+|+||.||.+.. .++..+++|.+........    |+..... .+|||++++++.+...+..+++||
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e   89 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMD   89 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEE
Confidence            356666665  9999999999985 4788899998865433221    2222221 269999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++++|.+++.    ....+++..+..++.|++.||.|||++
T Consensus        90 ~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~lH~~  128 (267)
T PHA03390         90 YIKDGDLFDLLK----KEGKLSEAEVKKIIRQLVEALNDLHKH  128 (267)
T ss_pred             cCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999983    334789999999999999999999974

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.69  E-value=5.8e-16  Score=109.42  Aligned_cols=115  Identities=25%  Similarity=0.349  Sum_probs=95.8

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ..|...+.||+|+||.||++.. .++..+++|.+......    ...+.+|+..+..++|||++++.+.+......++++
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  104 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM  104 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence            3477888999999999999985 46889999998654322    234778999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+ ++.+.+..   ....+++.++..++.|++.||.|||++
T Consensus       105 e~~~g-~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~  144 (317)
T cd06635         105 EYCLG-SASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSH  144 (317)
T ss_pred             eCCCC-CHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99975 77776632   234589999999999999999999974

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.68  E-value=2.3e-16  Score=115.17  Aligned_cols=110  Identities=23%  Similarity=0.350  Sum_probs=94.5

Q ss_pred             ecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCC
Q 041447           35 TWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNG  110 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g  110 (148)
                      .++||.|.||+||-|.+ ++|+.||+|+|++-...   ...+.+|+.+|+++.||.|+.+.-.+++++..++|||-+.| 
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G-  647 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-  647 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence            58899999999999995 58999999999874332   34578999999999999999999999999999999999966 


Q ss_pred             ChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          111 SLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       111 ~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |+.+-|..  ...+++++.....+..||+.||+|||.
T Consensus       648 DMLEMILS--sEkgRL~er~TkFlvtQIL~ALr~LH~  682 (888)
T KOG4236|consen  648 DMLEMILS--SEKGRLPERITKFLVTQILVALRYLHF  682 (888)
T ss_pred             hHHHHHHH--hhcccchHHHHHHHHHHHHHHHHHhhh
Confidence            66655543  345779999999999999999999996

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.68  E-value=6.2e-16  Score=117.65  Aligned_cols=118  Identities=25%  Similarity=0.394  Sum_probs=103.0

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcccceeeEEEe-----CCeEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVNVVQLLGFYSE-----GSKRA  101 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~-----~~~~~  101 (148)
                      .+.+.+.+.+|+|.+|.||+++. ++++..|+|++.......++...|..+++..+ |||++.++++|.-     ++.++
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLW   97 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLW   97 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEE
Confidence            34678999999999999999994 57888999999887767777888889988885 9999999999864     57799


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||||.+|+..+.++.-.  +..+.|..+..|.+.++.|+.+||.+
T Consensus        98 LVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~n  142 (953)
T KOG0587|consen   98 LVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNN  142 (953)
T ss_pred             EEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999999986533  77899999999999999999999975

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.68  E-value=9.4e-17  Score=111.61  Aligned_cols=114  Identities=22%  Similarity=0.362  Sum_probs=96.9

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccC---CCcCHHHHHHHHHHHhcCCCCcccceeeEEEe-----CCeE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLEN---SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE-----GSKR  100 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~  100 (148)
                      ..|...+.||+|++|.|+++.. .+|..||+|.+..   .....++..+|+..|+.++|+||+.+.+.+..     -+..
T Consensus        22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv  101 (359)
T KOG0660|consen   22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV  101 (359)
T ss_pred             ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence            3566688999999999999985 5789999999863   23346678999999999999999999999876     2559


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|+|+|+. ||.+.+    ..++.++...+..++.|++.||.|+|+.
T Consensus       102 YiV~elMet-DL~~ii----k~~~~L~d~H~q~f~YQiLrgLKyiHSA  144 (359)
T KOG0660|consen  102 YLVFELMET-DLHQII----KSQQDLTDDHAQYFLYQILRGLKYIHSA  144 (359)
T ss_pred             EEehhHHhh-HHHHHH----HcCccccHHHHHHHHHHHHHhcchhhcc
Confidence            999999955 999999    4556699999999999999999999973

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.68  E-value=2.7e-16  Score=109.12  Aligned_cols=114  Identities=26%  Similarity=0.485  Sum_probs=94.9

Q ss_pred             ceeecccccccceEEEEEEec-CCCEEEEEEccCCCc--CHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEEecc
Q 041447           32 LDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF--SAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      |.+.+.||+|++|.||+|... +++.+++|.+.....  ......+|+..+..++ |||++++++.+...+..+++|||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            567888999999999999964 678899998865433  2223567888999998 999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                       +|+|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        81 -~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~Lh~~  118 (283)
T cd07830          81 -EGNLYQLMKDR--KGKPFSESVIRSIIYQILQGLAHIHKH  118 (283)
T ss_pred             -CCCHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence             77998877432  134689999999999999999999974

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>PTZ00284 protein kinase; Provisional

Probab=99.68  E-value=4.5e-16  Score=115.38  Aligned_cols=114  Identities=16%  Similarity=0.269  Sum_probs=89.4

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC------CCcccceeeEEEeC-CeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIH------HVNVVQLLGFYSEG-SKR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~-~~~  100 (148)
                      ..+|.+.+.||+|+||.||+|.. .++..||+|+++...........|+.++..++      |++++.+.+++... +..
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~  207 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM  207 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence            45799999999999999999985 46888999998653333344556666666554      44588888887654 578


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +++|+++ +++|.+++.    ....+++..+..++.||+.||+|||+
T Consensus       208 ~iv~~~~-g~~l~~~l~----~~~~l~~~~~~~i~~qi~~aL~yLH~  249 (467)
T PTZ00284        208 CIVMPKY-GPCLLDWIM----KHGPFSHRHLAQIIFQTGVALDYFHT  249 (467)
T ss_pred             EEEEecc-CCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            8999988 668888873    34568999999999999999999995

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.68  E-value=5e-16  Score=110.88  Aligned_cols=114  Identities=21%  Similarity=0.247  Sum_probs=94.7

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeC---------
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEG---------   97 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---------   97 (148)
                      ..+|.+.+.||.|+||.||+|.. .++..+++|.+...... ...+.+|+.+++.++||||+++++.+...         
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            35799999999999999999985 46889999998665443 34578899999999999999999776543         


Q ss_pred             -----CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 -----SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                           ...++++||+.+ +|.+++.     ...+++..+..++.|++.||.|||++
T Consensus        84 ~~~~~~~~~lv~e~~~~-~L~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~  133 (342)
T cd07854          84 SLTELNSVYIVQEYMET-DLANVLE-----QGPLSEEHARLFMYQLLRGLKYIHSA  133 (342)
T ss_pred             cccccceEEEEeecccc-cHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence                 357899999974 8887772     23588999999999999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.68  E-value=7e-16  Score=108.35  Aligned_cols=116  Identities=28%  Similarity=0.449  Sum_probs=93.6

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCC----EEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGG----LIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~----~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      ..+|+..+.||+|+||.||++.. .++.    .+|+|.+......  ...+.+|+.++..++||||+++++.+... ..+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~   84 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ   84 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence            45788899999999999999985 3443    4788887653322  23577899999999999999999988654 467


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++||+++|+|.+++..   ....+++..+..++.|++.||.|||++
T Consensus        85 ~v~e~~~~g~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~LH~~  128 (303)
T cd05110          85 LVTQLMPHGCLLDYVHE---HKDNIGSQLLLNWCVQIAKGMMYLEER  128 (303)
T ss_pred             eeehhcCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            89999999999998843   234578999999999999999999974

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.68  E-value=1.2e-15  Score=108.38  Aligned_cols=114  Identities=18%  Similarity=0.244  Sum_probs=94.4

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEe-CCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSE-GSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv  103 (148)
                      .++|.+.+.||+|+||.||++.. .++..+|+|.+.....   ....+.+|+.++..++||||+++.+.+.. ....+++
T Consensus         9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv   88 (328)
T cd07856           9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFV   88 (328)
T ss_pred             ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEE
Confidence            45799999999999999999985 4788999998764322   23457789999999999999999998865 5678899


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||+ +++|..++.     ...+++..+..++.|++.||.|||++
T Consensus        89 ~e~~-~~~L~~~~~-----~~~~~~~~~~~~~~ql~~aL~~LH~~  127 (328)
T cd07856          89 TELL-GTDLHRLLT-----SRPLEKQFIQYFLYQILRGLKYVHSA  127 (328)
T ss_pred             eehh-ccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9998 458888772     23578888999999999999999974

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.67  E-value=9.4e-16  Score=109.17  Aligned_cols=113  Identities=19%  Similarity=0.296  Sum_probs=93.7

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeC-----CeEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEG-----SKRA  101 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~  101 (148)
                      ++|++.+.||+|+||.||.+.. .++..+|+|.+.....  ....+.+|+.++..++||||+++++.+...     ...+
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   84 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY   84 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence            5799999999999999999985 4788999999865322  234577899999999999999999886543     3589


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++||+.+ ++.+.+.     ...+++..+..++.|++.||.|||++
T Consensus        85 lv~e~~~~-~l~~~~~-----~~~l~~~~~~~i~~ql~~aL~~LH~~  125 (336)
T cd07849          85 IVQELMET-DLYKLIK-----TQHLSNDHIQYFLYQILRGLKYIHSA  125 (336)
T ss_pred             EEehhccc-CHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999975 8877662     24589999999999999999999974

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.67  E-value=1e-17  Score=124.25  Aligned_cols=124  Identities=25%  Similarity=0.329  Sum_probs=107.8

Q ss_pred             HHHHHHhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH-HHHHHHHHHHhcCCCCcccceeeEEEeCC
Q 041447           21 YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA-VEFINEVSTIGRIHHVNVVQLLGFYSEGS   98 (148)
Q Consensus        21 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~-~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   98 (148)
                      .+..+..+.++|++...+|.|++|.||+++. ++++..|+|+++....+. ...++|+-+++.++||||+.+++.|....
T Consensus         6 ~disrrnP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~d   85 (829)
T KOG0576|consen    6 SDISRRNPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD   85 (829)
T ss_pred             chhhhcCCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhc
Confidence            3444556778999999999999999999994 578899999998755443 33678898999999999999999999999


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++.||||.+|+|++.-    ...+++++.++..+.++.+.|+.|||+.
T Consensus        86 klwicMEycgggslQdiy----~~TgplselqiayvcRetl~gl~ylhs~  131 (829)
T KOG0576|consen   86 KLWICMEYCGGGSLQDIY----HVTGPLSELQIAYVCRETLQGLKYLHSQ  131 (829)
T ss_pred             CcEEEEEecCCCccccee----eecccchhHHHHHHHhhhhccchhhhcC
Confidence            999999999999999876    4567899999999999999999999974

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.67  E-value=1.9e-15  Score=106.73  Aligned_cols=113  Identities=26%  Similarity=0.368  Sum_probs=94.0

Q ss_pred             ceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           32 LDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      |...+.+|+|+||.||.|.. .++..+++|.+......    ...+.+|+.++..++|||++++.+.+.+....++++||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            56677899999999999985 46889999998653332    23477899999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+ ++.+++..   ....+++..+..++.|++.||.|||++
T Consensus       103 ~~~-~l~~~l~~---~~~~l~~~~~~~~~~qi~~al~~LH~~  140 (313)
T cd06633         103 CLG-SASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSH  140 (313)
T ss_pred             CCC-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            965 77776632   235689999999999999999999974

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=1.7e-16  Score=119.06  Aligned_cols=110  Identities=24%  Similarity=0.339  Sum_probs=93.9

Q ss_pred             cccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCChh
Q 041447           36 WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD  113 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~  113 (148)
                      -+||+|++|+||.|+. .+...+|||.+..... ..+-+..|+.+.++++|.||++++|.+..++..-|.||-.+||+|.
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            4689999999999995 4566789999976444 3445788999999999999999999999999999999999999999


Q ss_pred             hcccccCCCCCCC--CHHHHHHHHHHHHHHHhhhhcC
Q 041447          114 RHIFPNEGRGKSF--SWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       114 ~~l~~~~~~~~~~--~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++..   .=+++  .+..+..+..||+.||.|||++
T Consensus       661 sLLrs---kWGPlKDNEstm~fYtkQILeGLkYLHen  694 (1226)
T KOG4279|consen  661 SLLRS---KWGPLKDNESTMNFYTKQILEGLKYLHEN  694 (1226)
T ss_pred             HHHHh---ccCCCccchhHHHHHHHHHHHHhhhhhhc
Confidence            99843   23445  8889999999999999999985

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.67  E-value=7.9e-16  Score=108.39  Aligned_cols=112  Identities=15%  Similarity=0.140  Sum_probs=89.0

Q ss_pred             eecccccccceEEEEEEecCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCC
Q 041447           34 LTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNG  110 (148)
Q Consensus        34 ~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g  110 (148)
                      +++.+|.|+++.++.+.. ++..+|+|++.....   ....+.+|+..+..++||||+++++.+...+..+++|||+++|
T Consensus         6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~   84 (314)
T cd08216           6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG   84 (314)
T ss_pred             hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence            344445555554444444 688999999876422   2345889999999999999999999999999999999999999


Q ss_pred             ChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          111 SLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       111 ~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|.+++...  ....+++..+..++.|++.||.|||++
T Consensus        85 ~l~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~LH~~  120 (314)
T cd08216          85 SCEDLLKTH--FPEGLPELAIAFILKDVLNALDYIHSK  120 (314)
T ss_pred             CHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999988432  234588999999999999999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=3.3e-17  Score=127.26  Aligned_cols=116  Identities=19%  Similarity=0.187  Sum_probs=102.6

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCC----CcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|.+.++||+|+||.|...++ .+++.+|+|+++++    .....-|..|-++|-....+.|++++-+|-+..++|+
T Consensus        73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYl  152 (1317)
T KOG0612|consen   73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYL  152 (1317)
T ss_pred             CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEE
Confidence            467999999999999999999995 57999999999873    3334447778888888889999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ||||++||||-.++    ....++|++.+..|+..|..||.-||+
T Consensus       153 VMdY~pGGDlltLl----Sk~~~~pE~~ArFY~aEiVlAldslH~  193 (1317)
T KOG0612|consen  153 VMDYMPGGDLLTLL----SKFDRLPEDWARFYTAEIVLALDSLHS  193 (1317)
T ss_pred             EEecccCchHHHHH----hhcCCChHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999998    566689999999999999999999995

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.66  E-value=4.1e-17  Score=112.18  Aligned_cols=119  Identities=18%  Similarity=0.289  Sum_probs=98.8

Q ss_pred             hcCceeecccccccceEEEEEEec---C--CCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEe-CCe
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH---T--GGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSE-GSK   99 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~---~--~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~   99 (148)
                      ...|+....||+|++|.||+|...   +  .+.+|+|.++....   -.....+|+.+++.++|||++++..++.. +..
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence            447899999999999999999632   2  34789998876421   23457899999999999999999999877 788


Q ss_pred             EEEEEeccCCCChhhcccccC-CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNE-GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++++||.++ ||.+.|+.++ .....+|...+..++-||+.|+.|||+|
T Consensus       103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N  151 (438)
T KOG0666|consen  103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN  151 (438)
T ss_pred             EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh
Confidence            9999999988 9999887653 3346789999999999999999999986

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.66  E-value=2.3e-15  Score=106.11  Aligned_cols=112  Identities=21%  Similarity=0.345  Sum_probs=88.8

Q ss_pred             ecccccccceEEEEEEec---CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEe--CCeEEEEEeccCC
Q 041447           35 TWSSGKDGFGSVYKGQLH---TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE--GSKRALVYEYMPN  109 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~---~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~  109 (148)
                      +..||+|+||.||+|...   ++..+|+|.+..... ...+.+|+.++..++||||+++.+++..  ....++++||+.+
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH   84 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence            457899999999999853   457899998875432 3457789999999999999999998854  5678899999875


Q ss_pred             CChhhcccccC-----CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNE-----GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~-----~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                       +|.+++....     .....+++..+..++.|++.||.|||++
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~  127 (317)
T cd07867          85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN  127 (317)
T ss_pred             -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC
Confidence             7777663211     1234588999999999999999999974

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.66  E-value=1.7e-15  Score=103.96  Aligned_cols=110  Identities=30%  Similarity=0.400  Sum_probs=87.2

Q ss_pred             cccccccceEEEEEEec----CCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEE-eCCeEEEEEeccC
Q 041447           36 WSSGKDGFGSVYKGQLH----TGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYS-EGSKRALVYEYMP  108 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~----~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~  108 (148)
                      +.||+|+||.||+|...    ....+|+|.+.....  ....+.+|+.+++.++||||+++++.+. ..+..++++||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            35799999999999842    245789998754222  2345778999999999999999999765 4556889999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|+|.+++..   .....++..+..++.|++.||.|||++
T Consensus        81 ~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~  117 (262)
T cd05058          81 HGDLRNFIRS---ETHNPTVKDLIGFGLQVAKGMEYLASK  117 (262)
T ss_pred             CCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999843   223467788889999999999999974

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.66  E-value=2.1e-15  Score=108.04  Aligned_cols=114  Identities=22%  Similarity=0.228  Sum_probs=93.6

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeC------
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEG------   97 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------   97 (148)
                      ..++|+..+.||+|+||.||.+.. .++..+|+|.+......   ...+.+|+.++..++||||+++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            346899999999999999999985 47889999998653222   33567899999999999999999987643      


Q ss_pred             CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ...++++||+.+ +|.+.+.    .  .++...+..++.|++.||+|||++
T Consensus        94 ~~~~lv~e~~~~-~l~~~~~----~--~l~~~~~~~~~~ql~~aL~~LH~~  137 (353)
T cd07850          94 QDVYLVMELMDA-NLCQVIQ----M--DLDHERMSYLLYQMLCGIKHLHSA  137 (353)
T ss_pred             CcEEEEEeccCC-CHHHHHh----h--cCCHHHHHHHHHHHHHHHHHHHhC
Confidence            357999999965 8887762    2  278999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.66  E-value=7.5e-16  Score=109.25  Aligned_cols=113  Identities=23%  Similarity=0.366  Sum_probs=95.9

Q ss_pred             CceeecccccccceEEEEEEec-CCCEEEEEEccCCC---cCHHHHHHHHHHHhcCCCCcccceeeEEEeCC-----eEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSN---FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS-----KRA  101 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~  101 (148)
                      +|.+.+.||+|++|.||+|... ++..+++|.+....   ...+.+.+|+..+..++||||+++.+.+....     ..+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            4788999999999999999954 58899999887633   23456889999999999999999999987765     789


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|||+.+ +|.+++.    ....+++..++.++.|++.||+|||++
T Consensus        81 lv~e~~~~-~l~~~l~----~~~~l~~~~~~~i~~~l~~~l~~LH~~  122 (330)
T cd07834          81 IVTELMET-DLHKVIK----SPQPLTDDHIQYFLYQILRGLKYLHSA  122 (330)
T ss_pred             EEecchhh-hHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999975 8888873    334789999999999999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.66  E-value=2e-15  Score=107.95  Aligned_cols=119  Identities=22%  Similarity=0.307  Sum_probs=95.1

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeC-
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEG-   97 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-   97 (148)
                      .++.+ .++|.+.+.||+|+||.||.+.. .++..+|+|.+......   ...+.+|+.++.+++||||+++.+.+... 
T Consensus        11 ~~~~~-~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~   89 (345)
T cd07877          11 TIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR   89 (345)
T ss_pred             HHhhc-cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence            34444 35899999999999999999984 57889999998753322   34577899999999999999999987643 


Q ss_pred             -----CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 -----SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                           ...+++++++ +++|.+++.     ...+++..+..++.|++.||.|||++
T Consensus        90 ~~~~~~~~~lv~~~~-~~~L~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~  139 (345)
T cd07877          90 SLEEFNDVYLVTHLM-GADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHSA  139 (345)
T ss_pred             cccccccEEEEehhc-ccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence                 3467888876 678988762     23489999999999999999999974

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.66  E-value=9.6e-16  Score=106.21  Aligned_cols=113  Identities=21%  Similarity=0.359  Sum_probs=95.7

Q ss_pred             ceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           32 LDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      |...+.||+|++|.||++.. .++..+++|.+......   ...+.+|+.+++.++||+|+++++.+..++..++++||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            45678899999999999985 46888999998764433   345778999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+ ++.+++..   ....+++..+..++.|++.||.|||++
T Consensus        81 ~~-~l~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~  117 (283)
T cd05118          81 DT-DLYKLIKD---RQRGLPESLIKSYLYQLLQGLAFCHSH  117 (283)
T ss_pred             CC-CHHHHHHh---hcccCCHHHHHHHHHHHHHHHHHHHHC
Confidence            76 88887733   225689999999999999999999974

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.65  E-value=7.9e-16  Score=106.58  Aligned_cols=113  Identities=25%  Similarity=0.364  Sum_probs=96.0

Q ss_pred             ceeecccccccceEEEEEEe-cCCCEEEEEEccCCC---cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           32 LDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN---FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      |...+.||+|++|.||.|.. .++..+++|.+....   .....+..|+.+++.++||+++++++.+...+..++++||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            46678899999999999995 468899999987643   22345778999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+ +|.+++...   ...+++..+..++.|++.||.|||++
T Consensus        81 ~~-~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~  117 (282)
T cd07829          81 DM-DLKKYLDKR---PGPLSPNLIKSIMYQLLRGLAYCHSH  117 (282)
T ss_pred             Cc-CHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            85 899988432   14689999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.65  E-value=2.8e-15  Score=103.51  Aligned_cols=117  Identities=28%  Similarity=0.448  Sum_probs=92.0

Q ss_pred             ceeecccccccceEEEEEEec----CCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCC------
Q 041447           32 LDLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGS------   98 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~~----~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------   98 (148)
                      |.+.+.||+|+||.||++...    ++..+|+|.+......   .+.+.+|+.++..++||||+++++.+....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            466788999999999999742    4678999998764332   334778999999999999999999876532      


Q ss_pred             eEEEEEeccCCCChhhcccccC--CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNE--GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..+++++|+.+|+|.+++....  .....++...+..++.|++.||+|||++
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~  132 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK  132 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            2478899999999987763221  1223578999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.65  E-value=1.9e-15  Score=106.09  Aligned_cols=116  Identities=24%  Similarity=0.364  Sum_probs=93.6

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeC-------
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEG-------   97 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-------   97 (148)
                      .++|.+.+.||+|++|.||.+.. .++..+++|.+.....   ......+|+.++..++||||+++++.+...       
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            35899999999999999999995 4688999998865322   223467899999999999999999887543       


Q ss_pred             -CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 -SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                       ...++++||+.+ ++...+..   ....+++..+..++.|++.||+|||++
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~lH~~  134 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLEN---PSVKLTESQIKCYMLQLLEGINYLHEN  134 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence             346899999976 67666532   335689999999999999999999974

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.64  E-value=1.8e-15  Score=107.72  Aligned_cols=114  Identities=22%  Similarity=0.318  Sum_probs=93.1

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc---CHHHHHHHHHHHhcC-CCCcccceeeEEEe--CCeEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF---SAVEFINEVSTIGRI-HHVNVVQLLGFYSE--GSKRA  101 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~--~~~~~  101 (148)
                      .++|.+.+.||+|+||.||+|... ++..+++|.+.....   ....+.+|+.++.++ +||||+++++++..  ....+
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            357888999999999999999854 688899998754222   233467899999999 99999999998764  34689


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++||+.+ +|.+++.    .. .+++..+..++.|++.||.|||++
T Consensus        86 lv~e~~~~-~L~~~~~----~~-~~~~~~~~~i~~qi~~~L~~LH~~  126 (337)
T cd07852          86 LVFEYMET-DLHAVIR----AN-ILEDVHKRYIMYQLLKALKYIHSG  126 (337)
T ss_pred             EEeccccc-CHHHHHh----cC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999975 8988872    22 678899999999999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.64  E-value=1.9e-16  Score=120.24  Aligned_cols=114  Identities=26%  Similarity=0.408  Sum_probs=95.6

Q ss_pred             CceeecccccccceEEEEEEe-cCC----CEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTG----GLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~----~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      ..+..++||.|+||+||+|.+ ..+    -+||+|++.....  ...++..|+-.|.++.|||++++++++-.+. +.||
T Consensus       697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv  775 (1177)
T KOG1025|consen  697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV  775 (1177)
T ss_pred             hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence            456678899999999999984 323    3789998866433  3567999999999999999999999987665 7799


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|+++|+|.++++.+   ...+.....+.+..||++||.|||++
T Consensus       776 tq~mP~G~LlDyvr~h---r~~igsq~lLnw~~QIAkgM~YLe~q  817 (1177)
T KOG1025|consen  776 TQLMPLGCLLDYVREH---RDNIGSQDLLNWCYQIAKGMKYLEEQ  817 (1177)
T ss_pred             HHhcccchHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999654   35688899999999999999999974

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.64  E-value=1.1e-15  Score=113.48  Aligned_cols=114  Identities=25%  Similarity=0.390  Sum_probs=94.0

Q ss_pred             cCceeecccccccceEEEEEEec---CCC--EEEEEEccC--CCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH---TGG--LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~---~~~--~~avk~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      +...+...||.|-||.||.|.+.   .|.  -||||..+.  ...+.+.|..|+.+|+.+.||||++++|++... ..+|
T Consensus       389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wi  467 (974)
T KOG4257|consen  389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWI  467 (974)
T ss_pred             hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeE
Confidence            34556788999999999999842   233  477887755  233466799999999999999999999998754 5899


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |||.++.|.|..++..   ....++.....-+..||+.||.|||+
T Consensus       468 vmEL~~~GELr~yLq~---nk~sL~l~tL~ly~~Qi~talaYLeS  509 (974)
T KOG4257|consen  468 VMELAPLGELREYLQQ---NKDSLPLRTLTLYCYQICTALAYLES  509 (974)
T ss_pred             EEecccchhHHHHHHh---ccccchHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999943   44668899999999999999999996

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.64  E-value=2.1e-15  Score=107.67  Aligned_cols=114  Identities=23%  Similarity=0.323  Sum_probs=94.8

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCe-----
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSK-----   99 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-----   99 (148)
                      .++|.....||+|++|.||.+.. .++..+|+|.+......   ...+.+|+.+++.+.|||++++.+.+...+.     
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence            45799999999999999999996 46889999988653222   2346789999999999999999988766554     


Q ss_pred             -EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 -RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                       .++++||+ +++|.+++.     ...+++..+..++.|++.||.|||++
T Consensus        94 ~~~lv~e~~-~~~L~~~~~-----~~~l~~~~~~~~~~ql~~aL~~LH~~  137 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVK-----CQKLSDDHIQFLVYQILRGLKYIHSA  137 (343)
T ss_pred             cEEEEEecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence             89999998 569988872     24589999999999999999999974

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.63  E-value=6.6e-15  Score=102.22  Aligned_cols=114  Identities=21%  Similarity=0.358  Sum_probs=91.0

Q ss_pred             ceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC---HHHHHHHHHHHhcC---CCCcccceeeEEEeCCe-----
Q 041447           32 LDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS---AVEFINEVSTIGRI---HHVNVVQLLGFYSEGSK-----   99 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l---~~~~i~~~~~~~~~~~~-----   99 (148)
                      |++.+.||+|+||.||++... ++..+|+|.+......   ...+.+|+.++..+   .|||++++.+.+.....     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            567889999999999999965 5889999998754332   23355677666555   69999999999988766     


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++++||+.+ +|.+++...  ....+++..++.++.|++.||.|||++
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~--~~~~l~~~~~~~~~~~i~~al~~LH~~  126 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKC--PKPGLPPETIKDLMRQLLRGVDFLHSH  126 (287)
T ss_pred             eEEEehhccc-CHHHHHHHc--cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999975 788877432  223589999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.63  E-value=1.1e-15  Score=114.11  Aligned_cols=119  Identities=13%  Similarity=0.229  Sum_probs=86.5

Q ss_pred             hcCceeecccccccceEEEEEEec--CCCEEEEE------------------EccCCCcCHHHHHHHHHHHhcCCCCccc
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH--TGGLIAVK------------------MLENSNFSAVEFINEVSTIGRIHHVNVV   88 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~avk------------------~~~~~~~~~~~~~~e~~~l~~l~~~~i~   88 (148)
                      .++|.+.+.||+|+||.||.|..+  ++...+.|                  .+.........+.+|+.++..++||||+
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv  226 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL  226 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence            458999999999999999998632  22222222                  1111111223477899999999999999


Q ss_pred             ceeeEEEeCCeEEEEEeccCCCChhhcccccC-CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           89 QLLGFYSEGSKRALVYEYMPNGSLDRHIFPNE-GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        89 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++++...+..+++++++.+ ++.+++.... ..........+..++.|++.||.|||++
T Consensus       227 ~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~  286 (501)
T PHA03210        227 KIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK  286 (501)
T ss_pred             cEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999865 7777664321 1122334677889999999999999974

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.63  E-value=4.8e-15  Score=104.37  Aligned_cols=115  Identities=25%  Similarity=0.359  Sum_probs=94.5

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ..|...+.||+|++|.||.+.. .++..+++|.+......    ..++.+|+.+++.++|||++++.+++......++|+
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   94 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence            3567778899999999999995 46788999988653221    234678999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+. |++.+.+..   ....+++..+..++.|++.||.|||++
T Consensus        95 e~~~-~~l~~~~~~---~~~~l~~~~~~~~~~~l~~~l~~LH~~  134 (308)
T cd06634          95 EYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH  134 (308)
T ss_pred             EccC-CCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9997 477776632   234588999999999999999999974

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.63  E-value=3.8e-15  Score=103.71  Aligned_cols=117  Identities=21%  Similarity=0.246  Sum_probs=92.9

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS--AVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++|...+.||+|+||.||.+.. .++..+|+|.+......  ...+.+|+..+.++. ||||+++++.+..++..+++||
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e   83 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME   83 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence            4566778899999999999985 46889999998764332  345788999998886 9999999999998889999999


Q ss_pred             ccCCCChhhcccc-cCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          106 YMPNGSLDRHIFP-NEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       106 ~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |+.. ++.++... .......+++..+..++.|++.||+|||+
T Consensus        84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~  125 (288)
T cd06616          84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE  125 (288)
T ss_pred             cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            9865 55443211 11223568999999999999999999995

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.63  E-value=1.1e-14  Score=97.41  Aligned_cols=113  Identities=29%  Similarity=0.436  Sum_probs=97.4

Q ss_pred             ceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccC
Q 041447           32 LDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      |.+.+.+|+|+++.||++... ++..+++|.+......  ...+.+|+..+..++|++++++++.+......++++|++.
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            456788999999999999965 4889999999875543  4568889999999999999999999998899999999999


Q ss_pred             CCChhhcccccCCCCCC-CCHHHHHHHHHHHHHHHhhhhcC
Q 041447          109 NGSLDRHIFPNEGRGKS-FSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|.+++..    ... +++..+..++.+++.++.+||++
T Consensus        81 ~~~L~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lh~~  117 (225)
T smart00221       81 GGDLFDYLRK----KGGKLSEEEARFYLRQILEALEYLHSL  117 (225)
T ss_pred             CCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999998833    223 78999999999999999999974

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.63  E-value=2.3e-16  Score=113.19  Aligned_cols=115  Identities=21%  Similarity=0.289  Sum_probs=96.0

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHH--------HHHHHHHHHhcCCCCcccceeeEEE-eCC
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAV--------EFINEVSTIGRIHHVNVVQLLGFYS-EGS   98 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~--------~~~~e~~~l~~l~~~~i~~~~~~~~-~~~   98 (148)
                      .++|-+...||+|||+.||++.. ...+.+|+|+-.....+.+        ...+|.++.+.+.||.|+++++++. +..
T Consensus       462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd  541 (775)
T KOG1151|consen  462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD  541 (775)
T ss_pred             HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence            45788889999999999999984 5678899997654333321        2678999999999999999999986 456


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ..+-|+|||+|.||.-++    ...+.+++..+..|+.||+.||.||.+
T Consensus       542 sFCTVLEYceGNDLDFYL----KQhklmSEKEARSIiMQiVnAL~YLNE  586 (775)
T KOG1151|consen  542 SFCTVLEYCEGNDLDFYL----KQHKLMSEKEARSIIMQIVNALKYLNE  586 (775)
T ss_pred             cceeeeeecCCCchhHHH----HhhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence            788999999999999999    344678999999999999999999864

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.62  E-value=4.3e-15  Score=103.97  Aligned_cols=117  Identities=18%  Similarity=0.283  Sum_probs=94.3

Q ss_pred             hhhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ...++|.+.+.||+|++|.||.+... ++..+|+|.+......  ...+..|+..+... .||||+++++.+.+....++
T Consensus        12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~   91 (296)
T cd06618          12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI   91 (296)
T ss_pred             CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence            34567899999999999999999965 5889999998764332  23456677766666 49999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +|||+.+ ++.+++..   ....+++..+..++.|++.||.|||+
T Consensus        92 v~e~~~~-~l~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~  132 (296)
T cd06618          92 CMELMST-CLDKLLKR---IQGPIPEDILGKMTVAIVKALHYLKE  132 (296)
T ss_pred             EeeccCc-CHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999854 67666532   23468999999999999999999995

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.61  E-value=5.1e-15  Score=97.66  Aligned_cols=107  Identities=15%  Similarity=0.122  Sum_probs=78.7

Q ss_pred             ecccccccceEEEEEEecCCCEEEEEEccCCCcC---H-------H-----------------HHHHHHHHHhcCCCCcc
Q 041447           35 TWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---A-------V-----------------EFINEVSTIGRIHHVNV   87 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---~-------~-----------------~~~~e~~~l~~l~~~~i   87 (148)
                      .+.||+|+||.||.|...+|+.+|+|+++.....   .       .                 ....|+..+..+.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            4678999999999999768999999999764221   0       0                 12348888888887776


Q ss_pred             cceeeEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhh-hc
Q 041447           88 VQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL-HN  147 (148)
Q Consensus        88 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~l-H~  147 (148)
                      ........ . ..+|||||+.++++....    .....++...+..++.|++.+|.++ |+
T Consensus        82 ~~p~~~~~-~-~~~iVmE~i~g~~l~~~~----~~~~~~~~~~~~~i~~qi~~~L~~l~H~  136 (190)
T cd05147          82 PCPEPILL-K-SHVLVMEFIGDDGWAAPR----LKDAPLSESKARELYLQVIQIMRILYQD  136 (190)
T ss_pred             CCCcEEEe-c-CCEEEEEEeCCCCCcchh----hhcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            54443322 2 237999999987765443    1234688999999999999999999 55

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.61  E-value=8.2e-15  Score=104.96  Aligned_cols=109  Identities=18%  Similarity=0.110  Sum_probs=81.5

Q ss_pred             HhhhcCceeecccccccceEEEEEEec--CCCEEEEEEccCCCc------CHHHHHHHHHHHhcCCCCcccceeeEEEeC
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH--TGGLIAVKMLENSNF------SAVEFINEVSTIGRIHHVNVVQLLGFYSEG   97 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~avk~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   97 (148)
                      .....+|.+.+.||+|+||.||+|...  ++..+|+|.+.....      ....+.+|+.+|..++|+|++..+..   .
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~   90 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---T   90 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---c
Confidence            344568999999999999999999853  577789998653211      13448899999999999998853322   2


Q ss_pred             CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +..+++|||++|++|....     ..   .   ...++.|++.||.|||++
T Consensus        91 ~~~~LVmE~~~G~~L~~~~-----~~---~---~~~~~~~i~~aL~~lH~~  130 (365)
T PRK09188         91 GKDGLVRGWTEGVPLHLAR-----PH---G---DPAWFRSAHRALRDLHRA  130 (365)
T ss_pred             CCcEEEEEccCCCCHHHhC-----cc---c---hHHHHHHHHHHHHHHHHC
Confidence            4579999999999986321     11   1   146789999999999974

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.61  E-value=7.8e-16  Score=104.42  Aligned_cols=123  Identities=21%  Similarity=0.269  Sum_probs=102.8

Q ss_pred             HHHHHhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-----CH----HHHHHHHHHHhcC-CCCcccce
Q 041447           22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-----SA----VEFINEVSTIGRI-HHVNVVQL   90 (148)
Q Consensus        22 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-----~~----~~~~~e~~~l~~l-~~~~i~~~   90 (148)
                      ..-.+-+-+.|...+.+|+|..+.|.+|.+ .+|+.+|+|++.....     ..    +.-.+|+++|+++ .||+|+++
T Consensus         9 ~~aa~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l   88 (411)
T KOG0599|consen    9 KDAAKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDL   88 (411)
T ss_pred             hhhHhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEe
Confidence            344444556788899999999999998885 5788999999865222     11    2356889999998 59999999


Q ss_pred             eeEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           91 LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        91 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+.|+++...++|.|.|+.|.|++++    ...-.+++.....+++|+..|++|||.+
T Consensus        89 ~D~yes~sF~FlVFdl~prGELFDyL----ts~VtlSEK~tR~iMrqlfegVeylHa~  142 (411)
T KOG0599|consen   89 QDVYESDAFVFLVFDLMPRGELFDYL----TSKVTLSEKETRRIMRQLFEGVEYLHAR  142 (411)
T ss_pred             eeeccCcchhhhhhhhcccchHHHHh----hhheeecHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999    4556799999999999999999999963

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.61  E-value=1.8e-14  Score=102.48  Aligned_cols=113  Identities=19%  Similarity=0.251  Sum_probs=90.6

Q ss_pred             CceeecccccccceEEEEEEec-C--CCEEEEEEccCCCc---CHHHHHHHHHHHhcC-CCCcccceeeEEEe----CCe
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLH-T--GGLIAVKMLENSNF---SAVEFINEVSTIGRI-HHVNVVQLLGFYSE----GSK   99 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~-~--~~~~avk~~~~~~~---~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~   99 (148)
                      +|.+.+.||+|+||.||.+... +  +..+|+|.+.....   ....+.+|+.++..+ +||||+++++....    ...
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            4788899999999999999953 4  77899998865222   234577899999988 59999999987543    245


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++++++. ++|.+++    .....+++..+..++.|++.||+|||++
T Consensus        81 ~~~~~e~~~-~~L~~~l----~~~~~~~~~~~~~~~~qi~~aL~~LH~~  124 (332)
T cd07857          81 LYLYEELME-ADLHQII----RSGQPLTDAHFQSFIYQILCGLKYIHSA  124 (332)
T ss_pred             EEEEEeccc-CCHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            788899886 5898887    3445689999999999999999999974

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.61  E-value=3.6e-15  Score=107.57  Aligned_cols=115  Identities=18%  Similarity=0.328  Sum_probs=97.6

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-----C---CcccceeeEEEe----
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIH-----H---VNVVQLLGFYSE----   96 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-----~---~~i~~~~~~~~~----   96 (148)
                      .+|.+..+||.|-|++||.|... +.+.||+|+++......+....|+.+|++++     +   ..|+++++.|..    
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpN  157 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPN  157 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCC
Confidence            68999999999999999999964 6778999999877777788899999999873     2   379999998864    


Q ss_pred             CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           97 GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        97 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +.+.+||+|++ |-+|..+|..+  ..+-+|...+..|++||+.||.|||.
T Consensus       158 G~HVCMVfEvL-GdnLLklI~~s--~YrGlpl~~VK~I~~qvL~GLdYLH~  205 (590)
T KOG1290|consen  158 GQHVCMVFEVL-GDNLLKLIKYS--NYRGLPLSCVKEICRQVLTGLDYLHR  205 (590)
T ss_pred             CcEEEEEehhh-hhHHHHHHHHh--CCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            46799999998 55898888653  34558999999999999999999996

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.60  E-value=2.5e-16  Score=123.85  Aligned_cols=113  Identities=25%  Similarity=0.320  Sum_probs=97.9

Q ss_pred             ceeecccccccceEEEEEE-ecCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           32 LDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~-~~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .+-+..+|.|.||.||.|. ..+|...|+|.+.......   +.+.+|+.++..++|||+++++|+-...+..+|.||||
T Consensus      1237 Wqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC 1316 (1509)
T KOG4645|consen 1237 WQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYC 1316 (1509)
T ss_pred             eccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHh
Confidence            3446789999999999998 4678899999886644432   33778999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|+|.+.+    ..++..++.....+..|++.|+.|||++
T Consensus      1317 ~~GsLa~ll----~~gri~dE~vt~vyt~qll~gla~LH~~ 1353 (1509)
T KOG4645|consen 1317 EGGSLASLL----EHGRIEDEMVTRVYTKQLLEGLAYLHEH 1353 (1509)
T ss_pred             ccCcHHHHH----HhcchhhhhHHHHHHHHHHHHHHHHHhc
Confidence            999999988    5666778888889999999999999975

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.60  E-value=1.9e-14  Score=102.72  Aligned_cols=112  Identities=24%  Similarity=0.373  Sum_probs=91.8

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeC------Ce
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEG------SK   99 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~   99 (148)
                      .+|...+.||+|+||.||+|.. .++..+|+|.+.....   ....+.+|+.++..++||||+++.+++...      ..
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            4899999999999999999985 4788999998865322   234577899999999999999999988654      34


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++++||+.. ++.++.      ...+++..+..++.|++.||+|||++
T Consensus        95 ~~lv~e~~~~-~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~  136 (342)
T cd07879          95 FYLVMPYMQT-DLQKIM------GHPLSEDKVQYLVYQMLCGLKYIHSA  136 (342)
T ss_pred             EEEEeccccc-CHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            6899999865 776654      23478999999999999999999974

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.59  E-value=1.4e-15  Score=109.00  Aligned_cols=120  Identities=24%  Similarity=0.319  Sum_probs=102.1

Q ss_pred             hhhcCceeecccccccceEEEEEE-ecCCCEEEEEEccCCCcCHH----HHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~-~~~~~~~avk~~~~~~~~~~----~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      +..+.|..-.+||+|+||.|+.|. ..+|+-+|.|.+++.....+    -..+|-.+|+.++.++||.+--+|++++.++
T Consensus       182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC  261 (591)
T KOG0986|consen  182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC  261 (591)
T ss_pred             ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence            344677888999999999999998 56899999998876544322    3678889999999999999999999999999


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|+..|.||||.-+|....  ..-+++..+..++++|+.||++||++
T Consensus       262 lVLtlMNGGDLkfHiyn~g--~~gF~e~ra~FYAAEi~cGLehlH~~  306 (591)
T KOG0986|consen  262 LVLTLMNGGDLKFHIYNHG--NPGFDEQRARFYAAEIICGLEHLHRR  306 (591)
T ss_pred             EEEEeecCCceeEEeeccC--CCCCchHHHHHHHHHHHhhHHHHHhc
Confidence            9999999999998885532  24589999999999999999999974

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.59  E-value=1.1e-14  Score=98.98  Aligned_cols=100  Identities=21%  Similarity=0.084  Sum_probs=82.8

Q ss_pred             ccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCChhhccccc
Q 041447           41 DGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPN  119 (148)
Q Consensus        41 g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  119 (148)
                      |.++.||.+.. .+++.+|+|.+.....    ..+|...+....||||+++++.+...+..+++|||+++|+|.+++.  
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~--   77 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS--   77 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh----hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHH--
Confidence            78999999995 5788999999876432    2334444555579999999999999999999999999999999883  


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          120 EGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       120 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                        ....+++..+..++.|++.||.|||++
T Consensus        78 --~~~~l~~~~~~~~~~ql~~~l~~lH~~  104 (237)
T cd05576          78 --KFLNIPEECVKRWAAEMVVALDALHRE  104 (237)
T ss_pred             --HhcCCCHHHHHHHHHHHHHHHHHHHhC
Confidence              334589999999999999999999974

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.59  E-value=8.6e-15  Score=111.51  Aligned_cols=127  Identities=25%  Similarity=0.370  Sum_probs=105.1

Q ss_pred             HHHHHHhhhcCceeecccccccceEEEEEEec----C----CCEEEEEEccCCCcC--HHHHHHHHHHHhcCC-CCcccc
Q 041447           21 YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLH----T----GGLIAVKMLENSNFS--AVEFINEVSTIGRIH-HVNVVQ   89 (148)
Q Consensus        21 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~----~----~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~-~~~i~~   89 (148)
                      +...+++..+++.+.+.+|+|.||+|++|...    .    ...||+|.+......  .+.+..|+.+|..+. ||||+.
T Consensus       287 ~~~~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~  366 (609)
T KOG0200|consen  287 EDPKWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVN  366 (609)
T ss_pred             cCCceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhh
Confidence            33377888888888899999999999999721    1    457899988764433  456899999999995 999999


Q ss_pred             eeeEEEeCCeEEEEEeccCCCChhhcccccC---C-------CC--CCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           90 LLGFYSEGSKRALVYEYMPNGSLDRHIFPNE---G-------RG--KSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        90 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~-------~~--~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +.|++..++..++++||+..|+|.++++.++   .       ..  ..++..+.+.++.||+.||+||++
T Consensus       367 llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~  436 (609)
T KOG0200|consen  367 LLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS  436 (609)
T ss_pred             heeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999996544   0       01  238899999999999999999986

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.57  E-value=5.2e-14  Score=92.89  Aligned_cols=107  Identities=16%  Similarity=0.117  Sum_probs=79.8

Q ss_pred             ecccccccceEEEEEEecCCCEEEEEEccCCCcC---------------------------HHHHHHHHHHHhcCCCCcc
Q 041447           35 TWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---------------------------AVEFINEVSTIGRIHHVNV   87 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---------------------------~~~~~~e~~~l~~l~~~~i   87 (148)
                      ...||+|++|.||.|...+|..+|+|+++.....                           .....+|...+..+.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999668999999998764221                           0113478888888888887


Q ss_pred             cceeeEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           88 VQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        88 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ..........  .++||||++|+++....    .....++...+..++.|++.++.++|+
T Consensus        82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~----l~~~~~~~~~~~~i~~~l~~~l~~lH~  135 (190)
T cd05145          82 PVPEPILLKK--NVLVMEFIGDDGSPAPR----LKDVPLEEEEAEELYEQVVEQMRRLYQ  135 (190)
T ss_pred             CCceEEEecC--CEEEEEEecCCCchhhh----hhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            6555443332  47999999987554332    122457788999999999999999996

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.56  E-value=1.4e-13  Score=90.74  Aligned_cols=108  Identities=31%  Similarity=0.568  Sum_probs=93.4

Q ss_pred             cccccceEEEEEEec-CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCChhh
Q 041447           38 SGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDR  114 (148)
Q Consensus        38 lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~  114 (148)
                      ||+|.+|.||++... ++..+++|.+......  ...+.+|+..+..++|++++++.+.+......++++|++.+++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            589999999999964 5889999998765543  4568899999999999999999999999899999999999899999


Q ss_pred             cccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          115 HIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       115 ~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++...   ...++...+..++.+++.++.+||++
T Consensus        81 ~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~  111 (215)
T cd00180          81 LLKEN---EGKLSEDEILRILLQILEGLEYLHSN  111 (215)
T ss_pred             HHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            88322   14588999999999999999999974

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.55  E-value=2.2e-15  Score=103.24  Aligned_cols=112  Identities=21%  Similarity=0.229  Sum_probs=91.0

Q ss_pred             cCceee-cccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcC-CCCcccceeeEEEe----CCeEEE
Q 041447           30 SGLDLT-WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSE----GSKRAL  102 (148)
Q Consensus        30 ~~~~~~-~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~~~~~l  102 (148)
                      ++|.+. ++||-|-.|+|..|.+ +++..+|+|++..    .+...+|+++.-.. .||||++++++|++    ..-+.+
T Consensus        61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLi  136 (400)
T KOG0604|consen   61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLI  136 (400)
T ss_pred             hhheehhhhhccccCCceEEEEeccchhhhHHHHHhc----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEe
Confidence            466653 7799999999999985 5889999998864    34456787764444 59999999999875    234779


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |||+++||.|+..+.+  ...+.+++.++..|+.||+.|+.|||+
T Consensus       137 VmE~meGGeLfsriq~--~g~~afTErea~eI~~qI~~Av~~lH~  179 (400)
T KOG0604|consen  137 VMECMEGGELFSRIQD--RGDQAFTEREASEIMKQIGLAVRYLHS  179 (400)
T ss_pred             eeecccchHHHHHHHH--cccccchHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999998844  335669999999999999999999997

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.53  E-value=7.5e-15  Score=115.05  Aligned_cols=65  Identities=28%  Similarity=0.367  Sum_probs=54.8

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFY   94 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~   94 (148)
                      .+|+....||+||||.||+++-+ +|+.+|||.|.....+  -....+|+.++.+++||||++++..|
T Consensus       479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAW  546 (1351)
T KOG1035|consen  479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAW  546 (1351)
T ss_pred             hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhh
Confidence            46777899999999999999954 8999999999876422  23478999999999999999998765

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.53  E-value=1.2e-14  Score=101.36  Aligned_cols=119  Identities=19%  Similarity=0.237  Sum_probs=100.8

Q ss_pred             HhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcC-CCCcccceeeEEEeCCe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~   99 (148)
                      .+...+|.+..+||+|++++|..++. ++.+.+|+|++++...    +-...+.|-.+..+. +||+++.++.+|.+...
T Consensus       246 ~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesr  325 (593)
T KOG0695|consen  246 GLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESR  325 (593)
T ss_pred             ccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccce
Confidence            34456899999999999999999984 5788999999876332    222356777777777 59999999999999999


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|.||..||+|--++    +.+..+|++.+..+..+|+.||.|||++
T Consensus       326 lffvieyv~ggdlmfhm----qrqrklpeeharfys~ei~lal~flh~r  370 (593)
T KOG0695|consen  326 LFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEICLALNFLHER  370 (593)
T ss_pred             EEEEEEEecCcceeeeh----hhhhcCcHHHhhhhhHHHHHHHHHHhhc
Confidence            99999999999998877    6667799999999999999999999975

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.52  E-value=1.3e-13  Score=102.61  Aligned_cols=121  Identities=15%  Similarity=0.230  Sum_probs=85.6

Q ss_pred             hhcCceeecccccccceEEEEEEe-----------------cCCCEEEEEEccCCCcC-H--------------HHHHHH
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-----------------HTGGLIAVKMLENSNFS-A--------------VEFINE   75 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-----------------~~~~~~avk~~~~~~~~-~--------------~~~~~e   75 (148)
                      ..++|.+.++||+|+||.||+|..                 ..++.||+|.+...... .              +....|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            356899999999999999999853                 23467999998653221 1              123446


Q ss_pred             HHHHhcCCCCcc-----cceeeEEEe--------CCeEEEEEeccCCCChhhcccccCC--------------------C
Q 041447           76 VSTIGRIHHVNV-----VQLLGFYSE--------GSKRALVYEYMPNGSLDRHIFPNEG--------------------R  122 (148)
Q Consensus        76 ~~~l~~l~~~~i-----~~~~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~--------------------~  122 (148)
                      +.++..++|.++     +++.+++..        .+..++|+||+++++|.+++.....                    .
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            666777765543     555555532        3568999999999999988853211                    1


Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          123 GKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       123 ~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ...+++..+..++.|++.||.|||++
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~  328 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRI  328 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHC
Confidence            12346678899999999999999974

>PRK10345 hypothetical protein; Provisional

Probab=99.51  E-value=2.9e-13  Score=90.47  Aligned_cols=107  Identities=9%  Similarity=0.105  Sum_probs=79.2

Q ss_pred             eeecccccccceEEEEEEecCCCEEEEEEccCCCc-CHHHHHHHHHHHhcC-----CCCcccceeeEEEeCC---eEE-E
Q 041447           33 DLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNF-SAVEFINEVSTIGRI-----HHVNVVQLLGFYSEGS---KRA-L  102 (148)
Q Consensus        33 ~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~---~~~-l  102 (148)
                      .-.+.||+|+|+.||.  ++.....++|++..... ....+.+|+.++..+     .||||++++++++++.   ..+ +
T Consensus         5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~   82 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV   82 (210)
T ss_pred             CCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence            4457789999999996  43222336898865432 345688999999999     5799999999998863   434 7


Q ss_pred             EEec--cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHH-hhhhcC
Q 041447          103 VYEY--MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGI-EYLHNG  148 (148)
Q Consensus       103 v~e~--~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l-~~lH~~  148 (148)
                      ++||  +.+|+|.+++..    . .+++.  ..++.|++.++ +|||++
T Consensus        83 I~e~~G~~~~tL~~~l~~----~-~~~e~--~~~~~~~L~~l~~yLh~~  124 (210)
T PRK10345         83 IADFDGKPSITLTEFAEQ----C-RYEED--VAQLRQLLKKLKRYLLDN  124 (210)
T ss_pred             EecCCCCcchhHHHHHHc----c-cccHh--HHHHHHHHHHHHHHHHHC
Confidence            8999  557999999932    2 35555  35688888888 899975

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.50  E-value=2.8e-14  Score=100.17  Aligned_cols=117  Identities=16%  Similarity=0.242  Sum_probs=98.9

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC--CC----cccceeeEEEeCCeEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIH--HV----NVVQLLGFYSEGSKRA  101 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~--~~----~i~~~~~~~~~~~~~~  101 (148)
                      ..+|++.+.+|+|+||.|..|.. .++..+|+|+++.-....+...-|+++++++.  .|    .++++.+||...++.+
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC  167 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC  167 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence            45789999999999999999984 45789999999876666777888999999983  23    5677888899999999


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||.|.+ |.++.+++..+  ...++|...+..++.|++.+|+|||++
T Consensus       168 ivfell-G~S~~dFlk~N--~y~~fpi~~ir~m~~QL~~sv~fLh~~  211 (415)
T KOG0671|consen  168 IVFELL-GLSTFDFLKEN--NYIPFPIDHIRHMGYQLLESVAFLHDL  211 (415)
T ss_pred             EEEecc-ChhHHHHhccC--CccccchHHHHHHHHHHHHHHHHHHhc
Confidence            999988 45899999653  456789999999999999999999974

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.50  E-value=9.2e-15  Score=97.05  Aligned_cols=111  Identities=14%  Similarity=0.339  Sum_probs=93.7

Q ss_pred             hcCceeecccccccceEEEEEE-ecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcccceeeEEEeC--CeEEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVNVVQLLGFYSEG--SKRALVY  104 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~-~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~--~~~~lv~  104 (148)
                      .++|++...+|+|.++.|+.|. ..++..+++|++++-  ....+.+|+.+|..++ +|||+++++...++  ....++.
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV--kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF  114 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV--KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF  114 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH--HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence            4689999999999999999998 456778999988753  3456889999999996 99999999998764  4477999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||..+.|....-       +.++..++..++.|++.||.|||+.
T Consensus       115 E~v~n~Dfk~ly-------~tl~d~dIryY~~elLkALdyCHS~  151 (338)
T KOG0668|consen  115 EYVNNTDFKQLY-------PTLTDYDIRYYIYELLKALDYCHSM  151 (338)
T ss_pred             hhhccccHHHHh-------hhhchhhHHHHHHHHHHHHhHHHhc
Confidence            999887765544       5688899999999999999999974

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.48  E-value=7.3e-13  Score=89.35  Aligned_cols=103  Identities=27%  Similarity=0.450  Sum_probs=88.8

Q ss_pred             cceEEEEEEec-CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCChhhcccc
Q 041447           42 GFGSVYKGQLH-TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP  118 (148)
Q Consensus        42 ~~~~v~~~~~~-~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  118 (148)
                      +||.||.+... ++..+++|.+......  ...+.+|+..++.++|++++++.+.+......++++|++.+++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            57899999964 5889999998765443  46788999999999999999999999998999999999999999998832


Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          119 NEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       119 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                          ...++...++.++.+++.++.+||++
T Consensus        81 ----~~~~~~~~~~~~~~~l~~~l~~lh~~  106 (244)
T smart00220       81 ----RGRLSEDEARFYARQILSALEYLHSN  106 (244)
T ss_pred             ----ccCCCHHHHHHHHHHHHHHHHHHHHc
Confidence                23378999999999999999999974

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.48  E-value=9.5e-14  Score=94.25  Aligned_cols=113  Identities=15%  Similarity=0.289  Sum_probs=95.9

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcccceeeE-EEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVNVVQLLGF-YSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~-~~~~~~~~lv~e~  106 (148)
                      +.|.+.+.+|+|.||.|-.|.++ +...+++|.+........+|.+|...--.++ |.||+.-++. |.+.+...+++||
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~  103 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF  103 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence            46889999999999999999975 6678999999887777888999987766665 8999988765 6677888899999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ++.|||..-+    .. .-+.+.....++.|++.||+|+|+
T Consensus       104 aP~gdL~snv----~~-~GigE~~~K~v~~ql~SAi~fMHs  139 (378)
T KOG1345|consen  104 APRGDLRSNV----EA-AGIGEANTKKVFAQLLSAIEFMHS  139 (378)
T ss_pred             Cccchhhhhc----Cc-ccccHHHHHHHHHHHHHHHHHhhc
Confidence            9999998766    22 337889999999999999999997

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.47  E-value=9.2e-15  Score=104.26  Aligned_cols=119  Identities=23%  Similarity=0.261  Sum_probs=97.8

Q ss_pred             HhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcC-CCCcccceeeEEEeCCe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~   99 (148)
                      .+...+|.+..+||+|+||+|..+.. .+...+|||++++.-.    +.+-...|-++|.-. +-|.+++++.+|.+-+.
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR  424 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR  424 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence            44556899999999999999999985 4677899999876322    233345566665544 47899999999999999


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|+||||+.||||--.+    +..+.+-++.+..++.+|+-||-|||++
T Consensus       425 LyFVMEyvnGGDLMyhi----QQ~GkFKEp~AvFYAaEiaigLFFLh~k  469 (683)
T KOG0696|consen  425 LYFVMEYVNGGDLMYHI----QQVGKFKEPVAVFYAAEIAIGLFFLHSK  469 (683)
T ss_pred             eeeEEEEecCchhhhHH----HHhcccCCchhhhhhHHHHHHhhhhhcC
Confidence            99999999999998888    6667789999999999999999999974

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.46  E-value=7.2e-14  Score=102.34  Aligned_cols=123  Identities=14%  Similarity=0.112  Sum_probs=101.7

Q ss_pred             HHHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCC-CCcccceeeEEEeC
Q 041447           22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---AVEFINEVSTIGRIH-HVNVVQLLGFYSEG   97 (148)
Q Consensus        22 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~   97 (148)
                      +++-.+....|++.++||.||.+.||++...+.+.+|+|.+.....+   ...+.+|+..|.+++ |.+|++++++-..+
T Consensus       353 ~~~i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d  432 (677)
T KOG0596|consen  353 NEIIKVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTD  432 (677)
T ss_pred             CeeEEECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccC
Confidence            45666677889999999999999999999877788888877654443   345899999999995 99999999999999


Q ss_pred             CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+||||||=+- ||...+..   ....++...+..+..|++.|+.++|++
T Consensus       433 ~~lYmvmE~Gd~-DL~kiL~k---~~~~~~~~~lk~ywkqML~aV~~IH~~  479 (677)
T KOG0596|consen  433 GYLYMVMECGDI-DLNKILKK---KKSIDPDWFLKFYWKQMLLAVKTIHQH  479 (677)
T ss_pred             ceEEEEeecccc-cHHHHHHh---ccCCCchHHHHHHHHHHHHHHHHHHHh
Confidence            999999997544 99998843   333445568899999999999999974

>smart00090 RIO RIO-like kinase

Probab=99.44  E-value=1.3e-12  Score=89.00  Aligned_cols=110  Identities=15%  Similarity=0.094  Sum_probs=80.8

Q ss_pred             CceeecccccccceEEEEEE--ecCCCEEEEEEccCCCcC--------------------H-----HHHHHHHHHHhcCC
Q 041447           31 GLDLTWSSGKDGFGSVYKGQ--LHTGGLIAVKMLENSNFS--------------------A-----VEFINEVSTIGRIH   83 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~--~~~~~~~avk~~~~~~~~--------------------~-----~~~~~e~~~l~~l~   83 (148)
                      .|.+.+.||+|++|.||.|.  ..+|..+|+|++......                    .     ..+.+|+..+..+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999998  457999999998753210                    0     12457888888886


Q ss_pred             CC--cccceeeEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           84 HV--NVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        84 ~~--~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.  .++++++.   . ..++||||+.++++....    ..........+..++.|++.+|.+||++
T Consensus       109 ~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~----~~~~~~~~~~~~~i~~qi~~~l~~LH~~  167 (237)
T smart00090      109 EAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPR----LKDVEPEEEEEFELYDDILEEMRKLYKE  167 (237)
T ss_pred             hcCCCCCeeeEe---c-CceEEEEEecCCcccccc----cccCCcchHHHHHHHHHHHHHHHHHHhc
Confidence            43  34444432   2 357999999998887654    2223456667789999999999999974

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.44  E-value=1.6e-13  Score=102.36  Aligned_cols=124  Identities=20%  Similarity=0.214  Sum_probs=101.0

Q ss_pred             cHHHHHHhh--hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHH----HHHHHHHHhcCCCCcccceee
Q 041447           20 SYEDLRKLL--DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQLLG   92 (148)
Q Consensus        20 ~~~~~~~~~--~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~----~~~e~~~l~~l~~~~i~~~~~   92 (148)
                      .|..+....  .+-|..++.||-|+||.|..++. .+...+|+|.+++.+.-.+.    ...|-++|....++.||+++-
T Consensus       617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy  696 (1034)
T KOG0608|consen  617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY  696 (1034)
T ss_pred             hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence            444454443  34577889999999999999973 56778899998775443222    446777888889999999999


Q ss_pred             EEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        93 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      .|.+.+.+|+||+|++|||+-.++    -.-+.+++..+..+++++..|+++.|.
T Consensus       697 SFQDkdnLYFVMdYIPGGDmMSLL----IrmgIFeE~LARFYIAEltcAiesVHk  747 (1034)
T KOG0608|consen  697 SFQDKDNLYFVMDYIPGGDMMSLL----IRMGIFEEDLARFYIAELTCAIESVHK  747 (1034)
T ss_pred             EeccCCceEEEEeccCCccHHHHH----HHhccCHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999988    345678999999999999999999985

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.43  E-value=3e-12  Score=89.73  Aligned_cols=117  Identities=19%  Similarity=0.210  Sum_probs=80.4

Q ss_pred             hhhcCceeecccccccceEEEEEEec-C---CCEEEEEEccCCCcCH--H----------HHHHHHHHHhcCCCCcccce
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH-T---GGLIAVKMLENSNFSA--V----------EFINEVSTIGRIHHVNVVQL   90 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~---~~~~avk~~~~~~~~~--~----------~~~~e~~~l~~l~~~~i~~~   90 (148)
                      +...+|++.+.||+|+||.||+|... +   +..+++|.........  +          ....+...+..+.|++++.+
T Consensus         9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~   88 (294)
T PHA02882          9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY   88 (294)
T ss_pred             cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence            44568999999999999999999854 3   4466777543322211  1          11223334566789999999


Q ss_pred             eeEEEeCC----eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           91 LGFYSEGS----KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        91 ~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++......    ..+++++++.. ++.+.+    ......++..+..++.|++.||+|||++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~i~~qi~~~l~~lH~~  145 (294)
T PHA02882         89 YGCGSFKRCRMYYRFILLEKLVE-NTKEIF----KRIKCKNKKLIKNIMKDMLTTLEYIHEH  145 (294)
T ss_pred             EEeeeEecCCceEEEEEEehhcc-CHHHHH----HhhccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            98765433    34677887654 555555    2223457888999999999999999974

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.42  E-value=1.9e-12  Score=86.53  Aligned_cols=104  Identities=15%  Similarity=0.170  Sum_probs=82.5

Q ss_pred             cccccccceEEEEEEecCCCEEEEEEccCCCcC---------HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           36 WSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---------AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +.||+|++|.||.|.. .+..+++|........         ...+.+|+..+..+.+++++....++...+..+++|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            4689999999999987 4677889976543221         12367889999999999988887777777888999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|++|.+++..    .   .. ....++.+++.+|.++|+.
T Consensus        81 ~~G~~L~~~~~~----~---~~-~~~~i~~~i~~~l~~lH~~  114 (211)
T PRK14879         81 IEGEPLKDLINS----N---GM-EELELSREIGRLVGKLHSA  114 (211)
T ss_pred             eCCcCHHHHHHh----c---cH-HHHHHHHHHHHHHHHHHhC
Confidence            999999988722    1   12 7788999999999999963

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.41  E-value=8.2e-15  Score=98.54  Aligned_cols=114  Identities=23%  Similarity=0.386  Sum_probs=90.9

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccC---CCcCHHHHHHHHHHHhcCCCCcccceeeEEEe--------CC
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLEN---SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE--------GS   98 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------~~   98 (148)
                      .|.....+|+|.||.||+|+. ++++.||+|.+--   .........+|+.+|..++|+|++.+.+.+..        ..
T Consensus        18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~   97 (376)
T KOG0669|consen   18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA   97 (376)
T ss_pred             HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence            466677889999999999984 5677788876522   22334557899999999999999988887643        34


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+|+|+++|++ ||.-.+   ......++...+..++.+++.||.|+|.+
T Consensus        98 t~ylVf~~ceh-DLaGlL---sn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~  143 (376)
T KOG0669|consen   98 TFYLVFDFCEH-DLAGLL---SNRKVRFSLSEIKKVMKGLMNGLYYIHRN  143 (376)
T ss_pred             eeeeeHHHhhh-hHHHHh---cCccccccHHHHHHHHHHHHHHHHHHHHh
Confidence            58999999988 888877   22336789999999999999999999964

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.40  E-value=2.7e-14  Score=97.20  Aligned_cols=112  Identities=21%  Similarity=0.347  Sum_probs=93.8

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccC---CCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCC-----eEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLEN---SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS-----KRA  101 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~  101 (148)
                      +.+....||-|+||.||..+. ++|+.+++|.+..   +..+..++.+|+.+|...+|.|++...++...+.     ++|
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY  133 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY  133 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence            456678899999999999985 5899999998755   2224567889999999999999999998865543     377


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +++|.+.. ||...+    -..++++.+.+.-+..||+.||.|||+
T Consensus       134 V~TELmQS-DLHKII----VSPQ~Ls~DHvKVFlYQILRGLKYLHs  174 (449)
T KOG0664|consen  134 VLTELMQS-DLHKII----VSPQALTPDHVKVFVYQILRGLKYLHT  174 (449)
T ss_pred             HHHHHHHh-hhhhee----ccCCCCCcchhhhhHHHHHhhhHHHhh
Confidence            88898866 999988    567889999999999999999999996

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.39  E-value=1.2e-12  Score=91.13  Aligned_cols=117  Identities=23%  Similarity=0.336  Sum_probs=94.8

Q ss_pred             hhhcCceeecccccccceEEEEEE-ecCCCEEEEEEccCCCcCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~-~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      +..-+|.++++||+|+||.++.|+ .-++.+|||| +.+.......+..|.+..+.+ ..++|+.++-+.-.+.+-.||+
T Consensus        25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIK-fEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi  103 (449)
T KOG1165|consen   25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIK-FEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI  103 (449)
T ss_pred             EecccceeccccccCcceeeecccccccCceEEEE-eccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence            344589999999999999999998 4468999998 444455666777888887777 4899999876655667778999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |.+ |.+|+++.   ...+..++...++.++.|++.-|+|+|++
T Consensus       104 dLL-GPSLEDLF---D~CgR~FSvKTV~miA~Qmi~rie~vH~k  143 (449)
T KOG1165|consen  104 DLL-GPSLEDLF---DLCGRRFSVKTVAMIAKQMITRIEYVHEK  143 (449)
T ss_pred             hhh-CcCHHHHH---HHhcCcccHHhHHHHHHHHHHHHHHHHhc
Confidence            987 66888776   34567799999999999999999999974

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.38  E-value=3.3e-13  Score=88.39  Aligned_cols=121  Identities=20%  Similarity=0.267  Sum_probs=98.0

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhc-CCCCcccceeeEEEeCCeEEE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGR-IHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      +..+++.-+..||+|++|+|-+.++ .+|...|+|.+..+-.  .+.+..+|+++..+ ..+|+++.++|.+.+....+|
T Consensus        43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI  122 (282)
T KOG0984|consen   43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI  122 (282)
T ss_pred             cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence            3445666678899999999988885 4799999999876444  34557888887554 479999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .||.+.- +|..+-..--..++.+|+..+-.++..+..||.|||++
T Consensus       123 cME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k  167 (282)
T KOG0984|consen  123 CMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK  167 (282)
T ss_pred             eHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH
Confidence            9999976 77765543335678899999999999999999999974

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.37  E-value=1.1e-11  Score=83.58  Aligned_cols=114  Identities=17%  Similarity=0.125  Sum_probs=87.6

Q ss_pred             HHHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHH----------HHHHHHHHhcCCCCccccee
Q 041447           22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE----------FINEVSTIGRIHHVNVVQLL   91 (148)
Q Consensus        22 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~----------~~~e~~~l~~l~~~~i~~~~   91 (148)
                      +-.......+|...+++|+|+||.||.... ++..+|+|.+.+.....+.          +.+|+..+.++.||+|..+.
T Consensus        23 ~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~  101 (232)
T PRK10359         23 EIFDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLN  101 (232)
T ss_pred             HHHHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcce
Confidence            334445677899999999999999998655 4668999999765444333          47888899999999999999


Q ss_pred             eEEEeC--------CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           92 GFYSEG--------SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        92 ~~~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+...        +..+++|||++|.+|.++.        .+++    ....+++.+|..||++
T Consensus       102 d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~--------~~~~----~~~~~i~~~l~~lH~~  154 (232)
T PRK10359        102 DFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP--------EISE----DVKAKIKASIESLHQH  154 (232)
T ss_pred             EeeeecccccccccCCeEEEEEEECCccHHHhh--------hccH----HHHHHHHHHHHHHHHc
Confidence            886643        3578999999999998764        1222    2456899999999964

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.35  E-value=6e-14  Score=102.14  Aligned_cols=118  Identities=19%  Similarity=0.185  Sum_probs=99.5

Q ss_pred             hhhcCceeecccccccceEEEEEEecC-CCEEEEEEccCCCc---C-HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLHT-GGLIAVKMLENSNF---S-AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~avk~~~~~~~---~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      ....+++.+..||-|+||.|-...... ...+|+|++++...   . .+....|-.+|..+++|+|++++..|.++.+.|
T Consensus       417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY  496 (732)
T KOG0614|consen  417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY  496 (732)
T ss_pred             cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence            345677888899999999999888543 33589998877433   1 223668888999999999999999999999999


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||-|-||.|+..+    ...+.+....+..+...++.|++|||..
T Consensus       497 mLmEaClGGElWTiL----rdRg~Fdd~tarF~~acv~EAfeYLH~k  539 (732)
T KOG0614|consen  497 MLMEACLGGELWTIL----RDRGSFDDYTARFYVACVLEAFEYLHRK  539 (732)
T ss_pred             hhHHhhcCchhhhhh----hhcCCcccchhhhhHHHHHHHHHHHHhc
Confidence            999999999999998    5667899999999999999999999963

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.35  E-value=4.3e-12  Score=85.07  Aligned_cols=119  Identities=18%  Similarity=0.296  Sum_probs=95.7

Q ss_pred             HHhhhcCceeecccccccceEEEEEE-ecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEE
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~-~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..+....|.++..||.|+||.+|.|. ..+|..||+|.-.. ......+..|..+...++ ...|+.+..+.....+-.+
T Consensus        10 ~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~-~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvl   88 (341)
T KOG1163|consen   10 ELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS-KAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVL   88 (341)
T ss_pred             hheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecc-cCCCcchhHHHHHHHHhccCCCCchhhhhcccccccee
Confidence            34455689999999999999999998 46799999996543 334445677888888886 5788888777778888899


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+ |.+|+++...   ....++...++.++-|++.-++|+|.+
T Consensus        89 VMdLL-GPsLEdLfnf---C~R~ftmkTvLMLaDQml~RiEyvH~r  130 (341)
T KOG1163|consen   89 VMDLL-GPSLEDLFNF---CSRRFTMKTVLMLADQMLSRIEYVHLR  130 (341)
T ss_pred             eeecc-CccHHHHHHH---HhhhhhHHhHHHHHHHHHHHHHHHHhh
Confidence            99987 7789887743   346689999999999999999999953

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.32  E-value=1.5e-11  Score=81.53  Aligned_cols=100  Identities=19%  Similarity=0.244  Sum_probs=75.1

Q ss_pred             ccccccceEEEEEEecCCCEEEEEEccCCCcC---------HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           37 SSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---------AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        37 ~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .||+|++|.||.+... +..+++|........         ...+.+|+.++..++++++......+...+..+++|||+
T Consensus         1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            3799999999999854 678899985432211         133668999999998877666555556667788999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|++|.+++..    ..    .   .++.|++.+|.+||+.
T Consensus        80 ~g~~l~~~~~~----~~----~---~~~~~i~~~l~~lH~~  109 (199)
T TIGR03724        80 EGKPLKDVIEE----GN----D---ELLREIGRLVGKLHKA  109 (199)
T ss_pred             CCccHHHHHhh----cH----H---HHHHHHHHHHHHHHHC
Confidence            99999887721    11    1   7899999999999963

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.31  E-value=1.1e-13  Score=93.60  Aligned_cols=125  Identities=22%  Similarity=0.265  Sum_probs=98.5

Q ss_pred             HHHHHHhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcC-CCCcccceeeEEEe
Q 041447           21 YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRI-HHVNVVQLLGFYSE   96 (148)
Q Consensus        21 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~   96 (148)
                      ...++.+..++++-...||.|+||.|++..+ ..|+.+|||.|+....  ++.++..|.++..+- ++|+|++++|+...
T Consensus        55 ~~~~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~  134 (361)
T KOG1006|consen   55 DAHLHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS  134 (361)
T ss_pred             cccccccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc
Confidence            3455566667777788899999999999986 4799999999987554  355688888875544 69999999999999


Q ss_pred             CCeEEEEEeccCCCChhhcccc-cCCCCCCCCHHHHHHHHHHHHHHHhhhh
Q 041447           97 GSKRALVYEYMPNGSLDRHIFP-NEGRGKSFSWEKLHEVALGTARGIEYLH  146 (148)
Q Consensus        97 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~qi~~~l~~lH  146 (148)
                      .+.++|-||.|+- +|..+-+. .......+++.-+..++..+..||+||-
T Consensus       135 EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK  184 (361)
T KOG1006|consen  135 EGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLK  184 (361)
T ss_pred             CCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHH
Confidence            9999999999965 66544321 2233466899999999999999999984

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.29  E-value=3.7e-11  Score=85.37  Aligned_cols=115  Identities=20%  Similarity=0.208  Sum_probs=90.1

Q ss_pred             CceeecccccccceEEEEEEecC--CCEEEEEEccCCCc-CHHHHHHHHHHHhcCC----CCcccceeeEE-EeCCeEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLHT--GGLIAVKMLENSNF-SAVEFINEVSTIGRIH----HVNVVQLLGFY-SEGSKRAL  102 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~~--~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~----~~~i~~~~~~~-~~~~~~~l  102 (148)
                      +|++...||+|+||.||.+....  ...+|+|....... ....+..|..++..++    .++++.+.+.. ......++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            79999999999999999999543  34788887755322 1225667777777775    36899999888 47778899


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+ |.+|.++.....  .+.++...+..++.|++.+|++||+.
T Consensus        99 VM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~  141 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSK  141 (322)
T ss_pred             EEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhc
Confidence            99977 679998764332  56799999999999999999999973

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.29  E-value=4.5e-11  Score=90.29  Aligned_cols=104  Identities=13%  Similarity=0.107  Sum_probs=79.1

Q ss_pred             ceeecccccccceEEEEEEecCCCEEEEEEccCCCc---------CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           32 LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNF---------SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~---------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      |...+.||+|+||.||++..... .+++|.......         ....+.+|+.++..++|++++....+.......++
T Consensus       335 ~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~l  413 (535)
T PRK09605        335 KIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTI  413 (535)
T ss_pred             cCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEE
Confidence            34578899999999999986533 334343221111         12347789999999999999888777777777889


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||+++++|.+++.            ....++.|++.+|.+||++
T Consensus       414 v~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~  447 (535)
T PRK09605        414 VMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKA  447 (535)
T ss_pred             EEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhC
Confidence            999999999998772            3567899999999999974

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.28  E-value=3.2e-11  Score=91.47  Aligned_cols=117  Identities=18%  Similarity=0.190  Sum_probs=75.1

Q ss_pred             hcCceeecccccccceEEEEEEec-C----CCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeE------EEeC
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-T----GGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGF------YSEG   97 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~----~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~------~~~~   97 (148)
                      .++|.+.+.||+|+||.||+|... +    +..+|+|.+..... .+....+  .+....+.++..+...      ....
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~  207 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKE  207 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-hHHHHHH--HHHhhchhhHHHHHHhhhcccccccC
Confidence            468999999999999999999964 5    78999998764322 1111111  1111122222222111      1345


Q ss_pred             CeEEEEEeccCCCChhhcccccCCC----------------CCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEGR----------------GKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~~----------------~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ...++++||+.+++|.+++......                ........+..++.|++.||.|||++
T Consensus       208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~  274 (566)
T PLN03225        208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST  274 (566)
T ss_pred             CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC
Confidence            6789999999999999887432100                01112345678999999999999974

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.26  E-value=5.7e-12  Score=93.56  Aligned_cols=113  Identities=21%  Similarity=0.275  Sum_probs=90.6

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEEe
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      +.+.|.+...+|.|+|+.|-.|.. .+++..++|++.....   +..+|+.++... +||||++..+.+.+..+.|+|||
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~---~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD---DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheecccccc---ccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            356788999999999999999985 5788899999977522   233566554444 69999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+.|+-+.+.+    ..... ....+..++++|+.|+.|||++
T Consensus       397 ~l~g~ell~ri----~~~~~-~~~e~~~w~~~lv~Av~~LH~~  434 (612)
T KOG0603|consen  397 LLDGGELLRRI----RSKPE-FCSEASQWAAELVSAVDYLHEQ  434 (612)
T ss_pred             hccccHHHHHH----Hhcch-hHHHHHHHHHHHHHHHHHHHhc
Confidence            99998887777    23233 3378888999999999999974

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.26  E-value=9.9e-13  Score=89.65  Aligned_cols=116  Identities=24%  Similarity=0.411  Sum_probs=94.5

Q ss_pred             hcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      -..+.+..+|.+...|..|+|++. |..++.|++......   .++|..|.-.|+-.+||||+.+++.+..+.++.++..
T Consensus       189 ~~~lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq  267 (448)
T KOG0195|consen  189 VSSLNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQ  267 (448)
T ss_pred             hhhhhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeee
Confidence            345667788889999999999987 444555776553332   3457777777888899999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |++.|+|...+++  +.+..++..++..++.+++.|++|||+
T Consensus       268 ~mp~gslynvlhe--~t~vvvd~sqav~faldiargmaflhs  307 (448)
T KOG0195|consen  268 YMPFGSLYNVLHE--QTSVVVDHSQAVRFALDIARGMAFLHS  307 (448)
T ss_pred             eccchHHHHHHhc--CccEEEecchHHHHHHHHHhhHHHHhh
Confidence            9999999998854  455567889999999999999999996

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.25  E-value=1.2e-11  Score=88.02  Aligned_cols=112  Identities=20%  Similarity=0.339  Sum_probs=96.0

Q ss_pred             hcCceeecccccccceEEEEEEe-c---CCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-H---TGGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~---~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv  103 (148)
                      ...|..++++|+|.|+.||++.. .   ....+|+|.+.... ......+|+++|..+. +.||+++.+++...+...+|
T Consensus        35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~iv  113 (418)
T KOG1167|consen   35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIV  113 (418)
T ss_pred             hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEE
Confidence            35788999999999999999982 2   57789999987643 3456889999999985 89999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||+++-+..++.       ..++..++..+++.++.||.++|.+
T Consensus       114 lp~~~H~~f~~l~-------~~l~~~~i~~Yl~~ll~Al~~~h~~  151 (418)
T KOG1167|consen  114 LPYFEHDRFRDLY-------RSLSLAEIRWYLRNLLKALAHLHKN  151 (418)
T ss_pred             ecccCccCHHHHH-------hcCCHHHHHHHHHHHHHHhhhhhcc
Confidence            9999997777766       3367899999999999999999974

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.18  E-value=3.6e-10  Score=74.98  Aligned_cols=103  Identities=19%  Similarity=0.102  Sum_probs=75.1

Q ss_pred             ceeecccccccceEEEEEEecCCCEEEEEEccCCCcC-----------------------HHHHHHHHHHHhcCCCCc--
Q 041447           32 LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS-----------------------AVEFINEVSTIGRIHHVN--   86 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~-----------------------~~~~~~e~~~l~~l~~~~--   86 (148)
                      |.+.+.||+|+||.||++...+|..+|+|+++.....                       .....+|...+..+.+++  
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   96 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP   96 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence            7788999999999999998777999999987653311                       012456777788777663  


Q ss_pred             ccceeeEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        87 i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++.+.+    ....+++|||++|++|....    ..      .....++.+++.++.++|++
T Consensus        97 v~~~~~----~~~~~lv~e~~~g~~L~~~~----~~------~~~~~~~~~i~~~l~~lh~~  144 (198)
T cd05144          97 VPKPID----WNRHAVVMEYIDGVELYRVR----VL------EDPEEVLDEILEEIVKAYKH  144 (198)
T ss_pred             CCceee----cCCceEEEEEeCCcchhhcc----cc------ccHHHHHHHHHHHHHHHHHC
Confidence            444433    24468999999999887654    11      33467888999999999863

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.17  E-value=3.2e-11  Score=92.10  Aligned_cols=110  Identities=21%  Similarity=0.103  Sum_probs=84.3

Q ss_pred             eecccccccceE-EEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEEeccCCCC
Q 041447           34 LTWSSGKDGFGS-VYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGS  111 (148)
Q Consensus        34 ~~~~lg~g~~~~-v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~g~  111 (148)
                      -.+++|.|+.|+ ||+|... ++.||||.+-...  ..-+.+|+..|+.- .||||+++++.-.++...||..|.|.. +
T Consensus       513 ~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~--~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-s  588 (903)
T KOG1027|consen  513 PKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF--FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-S  588 (903)
T ss_pred             cHHHcccCCCCcEEEEEeeC-CceehHHHHhhHh--HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-h
Confidence            347788888865 7999876 7899999875321  23467999998877 599999999998889999999999976 9


Q ss_pred             hhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          112 LDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       112 L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |.+++..+.........-..+.+..|++.||++||+
T Consensus       589 L~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs  624 (903)
T KOG1027|consen  589 LQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS  624 (903)
T ss_pred             HHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh
Confidence            999995531111111224567889999999999996

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.17  E-value=6.1e-11  Score=93.14  Aligned_cols=117  Identities=21%  Similarity=0.214  Sum_probs=92.7

Q ss_pred             HhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC---CCcccceeeEEEeCCeEEE
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIH---HVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~l  102 (148)
                      ++..+.|.+...+|+|++|.||.|...+|+.+|+|+-++...+.--+..+  ++.+|+   -+.|..+..++...+..++
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q--~~~RLk~~~~~~~~~~~~a~~~~~~S~l  771 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQ--VMERLKPQMLPSIMHISSAHVFQNASVL  771 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHH--HHHhhchhhhcchHHHHHHHccCCccee
Confidence            34466788999999999999999998779999999988766654322222  223333   3556666666777888899


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||.+.|+|.+++    ...+.+++..+..++.|++..|++||..
T Consensus       772 v~ey~~~Gtlld~~----N~~~~m~e~lv~~~~~qml~ive~lH~~  813 (974)
T KOG1166|consen  772 VSEYSPYGTLLDLI----NTNKVMDEYLVMFFSCQMLRIVEHLHAM  813 (974)
T ss_pred             eeeccccccHHHhh----ccCCCCCchhhhHHHHHHHHHHHHHHhc
Confidence            99999999999999    4667799999999999999999999963

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.12  E-value=1e-09  Score=68.89  Aligned_cols=100  Identities=17%  Similarity=0.090  Sum_probs=80.4

Q ss_pred             ecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCC--CcccceeeEEEeCCeEEEEEeccCCCCh
Q 041447           35 TWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHH--VNVVQLLGFYSEGSKRALVYEYMPNGSL  112 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~lv~e~~~~g~L  112 (148)
                      .+.+|+|.++.||++...+ ..+++|....... ...+.+|+..+..+++  +.+++++......+..++++||+.++.+
T Consensus         3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~   80 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL   80 (155)
T ss_pred             ceecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence            4678999999999999753 6789998866443 4567889988888875  5888888888777889999999988766


Q ss_pred             hhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          113 DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       113 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ..+           +......++.+++.+++++|.
T Consensus        81 ~~~-----------~~~~~~~~~~~~~~~l~~lh~  104 (155)
T cd05120          81 DEV-----------SEEEKEDIAEQLAELLAKLHQ  104 (155)
T ss_pred             ccC-----------CHHHHHHHHHHHHHHHHHHhC
Confidence            532           556667789999999999996

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.12  E-value=3.5e-11  Score=82.11  Aligned_cols=113  Identities=17%  Similarity=0.282  Sum_probs=90.5

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++++...+|.|+.|+||+++. .+|..+|||.+...+..  ..+++..++++... .+|.|++.+|+|..+....+.||.
T Consensus        93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel  172 (391)
T KOG0983|consen   93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL  172 (391)
T ss_pred             HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence            345567789999999999995 57899999999875543  34577788876655 489999999999999999999998


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |.. .++.+++   ...+++|+..+-.+...+.+||.||-+
T Consensus       173 Ms~-C~ekLlk---rik~piPE~ilGk~tva~v~AL~YLKe  209 (391)
T KOG0983|consen  173 MST-CAEKLLK---RIKGPIPERILGKMTVAIVKALYYLKE  209 (391)
T ss_pred             HHH-HHHHHHH---HhcCCchHHhhhhhHHHHHHHHHHHHH
Confidence            854 4555553   345679999999999999999999853

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.09  E-value=1.6e-09  Score=72.10  Aligned_cols=100  Identities=14%  Similarity=0.095  Sum_probs=74.9

Q ss_pred             eeecccccccceEEEEEEecCCCEEEEEEccCCCcCHH-----HHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEEec
Q 041447           33 DLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAV-----EFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        33 ~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~-----~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .....|++|+||.|+.+.. ++..++.+.+........     .+.+|+.+|.+++ ++++++++++    +..+++|||
T Consensus         5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey   79 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY   79 (218)
T ss_pred             ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence            3466789999999996665 577788777766444333     3779999999995 5889998875    346899999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.|.+|.+.+    ..      . ...++.|++.+|.++|++
T Consensus        80 I~G~~L~~~~----~~------~-~~~~~~qi~~~L~~lH~~  110 (218)
T PRK12274         80 LAGAAMYQRP----PR------G-DLAYFRAARRLLQQLHRC  110 (218)
T ss_pred             ecCccHHhhh----hh------h-hHHHHHHHHHHHHHHHHC
Confidence            9998886543    11      1 135788999999999974

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.05  E-value=8.1e-09  Score=71.94  Aligned_cols=114  Identities=25%  Similarity=0.414  Sum_probs=93.2

Q ss_pred             ceeecccccccceEEEEEEecCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCC-cccceeeEEEeCCeEEEEEec
Q 041447           32 LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHV-NVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      |.+...+|.|+|+.||.+...  ..+++|.+......    ...+.+|+..+..+.|+ +++.+.+.+......++++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            677888999999999999875  67888988664332    45688999999999987 799999999777778999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.++++.+++...... ..++......++.|++.++.|+|++
T Consensus        80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~  120 (384)
T COG0515          80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSK  120 (384)
T ss_pred             CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999998666221100 2689999999999999999999964

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.03  E-value=4.1e-10  Score=82.80  Aligned_cols=122  Identities=18%  Similarity=0.301  Sum_probs=99.9

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCC--C----cccceeeEEE
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHH--V----NVVQLLGFYS   95 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~--~----~i~~~~~~~~   95 (148)
                      .+.+.....|.+....|+|-|+.|..|.. ..|..||||+|.........-+.|+++|++|+.  |    |++.++..|.
T Consensus       425 ~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~  504 (752)
T KOG0670|consen  425 RIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK  504 (752)
T ss_pred             ehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh
Confidence            45666778899999999999999999984 467899999998766555566789999999852  2    8899999999


Q ss_pred             eCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhh
Q 041447           96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH  146 (148)
Q Consensus        96 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH  146 (148)
                      ..+++|||+|-+.. +|.+.++.. +..--+....+..|+.|+..||..|-
T Consensus       505 hknHLClVFE~Lsl-NLRevLKKy-G~nvGL~ikaVRsYaqQLflALklLK  553 (752)
T KOG0670|consen  505 HKNHLCLVFEPLSL-NLREVLKKY-GRNVGLHIKAVRSYAQQLFLALKLLK  553 (752)
T ss_pred             hcceeEEEehhhhc-hHHHHHHHh-CcccceeehHHHHHHHHHHHHHHHHH
Confidence            99999999999876 898888543 23344778889999999999998763

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.03  E-value=2e-10  Score=81.86  Aligned_cols=120  Identities=19%  Similarity=0.213  Sum_probs=91.3

Q ss_pred             hcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEe-CCe
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSE-GSK   99 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~   99 (148)
                      +.++.+...+-+|.||.||.|.++      +.+.+-+|.++..-.  ....+..|.-.+..+.|||+..+.+.... ...
T Consensus       283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~  362 (563)
T KOG1024|consen  283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYAT  362 (563)
T ss_pred             hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCc
Confidence            456777888999999999999643      233455565543221  12347788888999999999999998754 566


Q ss_pred             EEEEEeccCCCChhhccccc----CCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPN----EGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+..+.+...|+|..|+.-.    ....+.++..+...++.|++.||+|||++
T Consensus       363 P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~  415 (563)
T KOG1024|consen  363 PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH  415 (563)
T ss_pred             ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc
Confidence            77888999889999988621    13456788999999999999999999974

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.97  E-value=2.2e-09  Score=70.44  Aligned_cols=104  Identities=16%  Similarity=0.161  Sum_probs=67.1

Q ss_pred             ecccccccceEEEEEEecCCCEEEEEEccCCCcCHHH-------------------------HHHHHHHHhcCCCC--cc
Q 041447           35 TWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE-------------------------FINEVSTIGRIHHV--NV   87 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~-------------------------~~~e~~~l~~l~~~--~i   87 (148)
                      .+.||+|+||.||.+...++..+|+|++.........                         ...|...+..+.+.  .+
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            4678999999999999777899999998764322111                         12444445554333  23


Q ss_pred             cceeeEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           88 VQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        88 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +++++.    ...+++|||++++++.....    ..... ...+..++.+++.++.++|.
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l----~~~~~-~~~~~~~~~~~~~~l~~lh~  132 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRL----KDVRL-LEDPEELYDQILELMRKLYR  132 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhh----hhhhh-cccHHHHHHHHHHHHHHHhh
Confidence            444332    23589999999865432110    00001 16678899999999999996

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.94  E-value=1.8e-08  Score=67.57  Aligned_cols=107  Identities=17%  Similarity=0.138  Sum_probs=81.4

Q ss_pred             cccccccceEEEEEEecCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCC--CcccceeeEEEeC---CeEEEEEeccC
Q 041447           36 WSSGKDGFGSVYKGQLHTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHH--VNVVQLLGFYSEG---SKRALVYEYMP  108 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~---~~~~lv~e~~~  108 (148)
                      +.++.|..+.+|++...+|..+++|.......  ....+.+|..++..+.+  ..+++++.+....   +..+++|||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            56789999999999876567899998765432  34457889988888865  4467776665443   25689999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |.++.+.+    .. ..++..+...++.+++.+|..||+
T Consensus        84 G~~l~~~~----~~-~~~~~~~~~~i~~~i~~~l~~lH~  117 (223)
T cd05154          84 GRVLRDRL----LR-PELSPEERRALARALADTLAALHS  117 (223)
T ss_pred             CEecCCCC----CC-CCCCHHHHHHHHHHHHHHHHHHhC
Confidence            98887755    11 346888888999999999999996

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=98.83  E-value=2.4e-09  Score=74.41  Aligned_cols=111  Identities=21%  Similarity=0.212  Sum_probs=86.8

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCC---cCHHHHHHHHHHHhcCCCCcccceeeEEEeCC------e
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN---FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS------K   99 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------~   99 (148)
                      .+|.....+|.|.- .|..+.. -.++++++|......   ...++..+|..++..+.|+||++++.++....      .
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e   95 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE   95 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence            35666777787766 5656653 257889998775432   23556889999999999999999999997653      4


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .|+|||++.. +|.+.+.      -.++-..+..++.|++.|+.|||++
T Consensus        96 ~y~v~e~m~~-nl~~vi~------~elDH~tis~i~yq~~~~ik~lhs~  137 (369)
T KOG0665|consen   96 VYLVMELMDA-NLCQVIL------MELDHETISYILYQMLCGIKHLHSA  137 (369)
T ss_pred             HHHHHHhhhh-HHHHHHH------HhcchHHHHHHHHHHHHHHHHHHhc
Confidence            8899999977 8998883      3467788899999999999999974

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.69  E-value=2.2e-07  Score=63.51  Aligned_cols=102  Identities=12%  Similarity=0.121  Sum_probs=67.7

Q ss_pred             ccc-cccceEEEEEEecCCCEEEEEEccCCC--------------cCHHHHHHHHHHHhcCCCCcc--cceeeEEEe-CC
Q 041447           37 SSG-KDGFGSVYKGQLHTGGLIAVKMLENSN--------------FSAVEFINEVSTIGRIHHVNV--VQLLGFYSE-GS   98 (148)
Q Consensus        37 ~lg-~g~~~~v~~~~~~~~~~~avk~~~~~~--------------~~~~~~~~e~~~l~~l~~~~i--~~~~~~~~~-~~   98 (148)
                      .+| .|+.|.+|..... +..+++|.+...+              .....+.+|+.++..+.++++  +.+++.... ..
T Consensus        38 ~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~  116 (239)
T PRK01723         38 VVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG  116 (239)
T ss_pred             eeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecC
Confidence            344 5666677766654 6678888775322              122347789999999988775  566665333 22


Q ss_pred             ---eEEEEEeccCC-CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 ---KRALVYEYMPN-GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ---~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                         ..++++|+++| .+|.+++.    . ..++..    .+.|++.+|.+||++
T Consensus       117 ~~~~~~lV~e~l~G~~~L~~~l~----~-~~l~~~----~~~~i~~~l~~lH~~  161 (239)
T PRK01723        117 LFYRADILIERIEGARDLVALLQ----E-APLSEE----QWQAIGQLIARFHDA  161 (239)
T ss_pred             cceeeeEEEEecCCCCCHHHHHh----c-CCCCHH----HHHHHHHHHHHHHHC
Confidence               23599999997 68888772    2 234443    357899999999974

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.46  E-value=1.4e-06  Score=64.78  Aligned_cols=105  Identities=21%  Similarity=0.235  Sum_probs=75.3

Q ss_pred             eEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEe----CCeEEEEEeccCC-CChhhcc
Q 041447           44 GSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSE----GSKRALVYEYMPN-GSLDRHI  116 (148)
Q Consensus        44 ~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~lv~e~~~~-g~L~~~l  116 (148)
                      .+-|++.. .+|..+++|++..... .......-.+.++++.|+|++.+.+++..    +..+.+|++|+++ ++|.+.-
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            55788875 4788899999833221 11123344667899999999999998863    5679999999886 4565543


Q ss_pred             cccC-----------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          117 FPNE-----------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       117 ~~~~-----------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..+.           ..+...++..+|.++.|+..||.++|++
T Consensus       370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss  412 (655)
T KOG3741|consen  370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS  412 (655)
T ss_pred             ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence            2211           1234478899999999999999999974

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.42  E-value=2e-07  Score=70.29  Aligned_cols=109  Identities=14%  Similarity=0.151  Sum_probs=66.5

Q ss_pred             CceeecccccccceEEEEEEecC-CCEEEEEEccCCCc---------------------------CHH------------
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLHT-GGLIAVKMLENSNF---------------------------SAV------------   70 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~~-~~~~avk~~~~~~~---------------------------~~~------------   70 (148)
                      .|.. +.+|.|++|+||.|+..+ |+.||||++.+.-.                           ...            
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~  199 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD  199 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence            3454 789999999999999765 99999999976421                           000            


Q ss_pred             --HHHHHHHHHhcC----CCCcccceeeEEEe-CCeEEEEEeccCCCChhhccc--ccCCCCCCCCHHHHHHHHHHHHH
Q 041447           71 --EFINEVSTIGRI----HHVNVVQLLGFYSE-GSKRALVYEYMPNGSLDRHIF--PNEGRGKSFSWEKLHEVALGTAR  140 (148)
Q Consensus        71 --~~~~e~~~l~~l----~~~~i~~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~~i~~qi~~  140 (148)
                        ++.+|+..+.++    .+...+.+...+.+ ....+|||||+.|+++.+...  ........+.+..+..++.|+..
T Consensus       200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~  278 (537)
T PRK04750        200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFR  278 (537)
T ss_pred             hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence              133444444443    23333333334332 455779999999999876421  11011123556666677777764

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.40  E-value=2.3e-06  Score=55.05  Aligned_cols=98  Identities=16%  Similarity=0.070  Sum_probs=65.9

Q ss_pred             ecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCc-ccceeeEEEeCCeEEEEEeccCCCChh
Q 041447           35 TWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVN-VVQLLGFYSEGSKRALVYEYMPNGSLD  113 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~e~~~~g~L~  113 (148)
                      .+.++.|.++.+|.+... +..+++|.............+|+..+..+.+.+ +++++...  ....+++|||++|.++.
T Consensus         3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~   79 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL   79 (170)
T ss_pred             eeecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence            356788999999998865 778999987654322334567888888775433 44555443  33457999999998775


Q ss_pred             hcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          114 RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       114 ~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ...         ..   ....+.+++.+|+.||+
T Consensus        80 ~~~---------~~---~~~~~~~l~~~l~~LH~  101 (170)
T cd05151          80 TED---------FS---DPENLEKIAKLLKKLHS  101 (170)
T ss_pred             ccc---------cc---CHHHHHHHHHHHHHHhC
Confidence            421         11   12356788999999986

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.39  E-value=3e-06  Score=62.83  Aligned_cols=53  Identities=21%  Similarity=0.277  Sum_probs=36.8

Q ss_pred             cCCCCCCcHHHHHHhhhcCce----------eecccccccceEEEEEEecCCCEEEEEEccCC
Q 041447           13 NRSVDNPSYEDLRKLLDSGLD----------LTWSSGKDGFGSVYKGQLHTGGLIAVKMLENS   65 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~----------~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~   65 (148)
                      ....+..++.++.+...+.+.          -.+.+|.|++|+||+|+..+|+.||||++.+.
T Consensus        90 qd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~  152 (437)
T TIGR01982        90 QDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPG  152 (437)
T ss_pred             hcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCcceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence            344455556555554432221          13679999999999999888999999998663

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.34  E-value=1.8e-06  Score=65.60  Aligned_cols=88  Identities=18%  Similarity=0.201  Sum_probs=69.0

Q ss_pred             ecCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHH
Q 041447           51 LHTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWE  129 (148)
Q Consensus        51 ~~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~  129 (148)
                      ..++.++.+...+.+... .....+.+.-|+.++||+|+++++.++..+.+|||+|.+.  .|..++.       .+...
T Consensus        34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk-------~l~~~  104 (690)
T KOG1243|consen   34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLK-------ELGKE  104 (690)
T ss_pred             eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHH-------HhHHH
Confidence            446888888877665542 2335677788999999999999999999999999999985  5666662       23466


Q ss_pred             HHHHHHHHHHHHHhhhhc
Q 041447          130 KLHEVALGTARGIEYLHN  147 (148)
Q Consensus       130 ~~~~i~~qi~~~l~~lH~  147 (148)
                      .+.--+.||+.||.|||+
T Consensus       105 ~v~~Gl~qIl~AL~FL~~  122 (690)
T KOG1243|consen  105 EVCLGLFQILAALSFLND  122 (690)
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            677788999999999985

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.23  E-value=2.7e-06  Score=63.27  Aligned_cols=67  Identities=21%  Similarity=0.426  Sum_probs=59.6

Q ss_pred             HhcCCCCcccceeeEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           79 IGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        79 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+.+.|.|+.++.|.+.+++..+++.+||.-|+|.+.+..   ....+++.....++++++.||+|+|+.
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~s   67 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHNS   67 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhcC
Confidence            3567899999999999999999999999999999999833   356688999999999999999999973

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.08  E-value=1.2e-06  Score=65.99  Aligned_cols=107  Identities=19%  Similarity=0.277  Sum_probs=84.9

Q ss_pred             ccccccceEEEEEE----ecCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEEeccC
Q 041447           37 SSGKDGFGSVYKGQ----LHTGGLIAVKMLENSNFS---AVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        37 ~lg~g~~~~v~~~~----~~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      .+|+|++|.|+.++    ...+.-+++|..++....   ......|..++..++ ||.+++++..+..+...++++++..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            36899999998875    234667888877653221   113445666677776 9999999999999999999999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +|++...+    .....+.+.....+...++-|++++|+
T Consensus        81 gg~lft~l----~~~~~f~~~~~~~~~aelaLald~lh~  115 (612)
T KOG0603|consen   81 GGDLFTRL----SKEVMFDELDVAFYLAELALALDHLHK  115 (612)
T ss_pred             cchhhhcc----ccCCchHHHHHHHHHHHHHHHHhhcch
Confidence            99998877    555667888889999999999999996

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.03  E-value=1.4e-06  Score=66.77  Aligned_cols=111  Identities=18%  Similarity=0.147  Sum_probs=74.5

Q ss_pred             eeecccccccceEEEEEEec-CCCEEEEEEccC---CCcCHHH----HHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           33 DLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLEN---SNFSAVE----FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        33 ~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~---~~~~~~~----~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      .....+|.|++|.++.+... .......|....   .......    ...|..+-..+.|||++.............-.|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            35677899999977777632 333334443321   1112211    334444555678999887776665544444459


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||++ ||...+    .....+....+..++.|++.||+|||+.
T Consensus       401 E~~~~-Dlf~~~----~~~~~~~~~e~~c~fKqL~~Gv~y~h~~  439 (601)
T KOG0590|consen  401 EYCPY-DLFSLV----MSNGKLTPLEADCFFKQLLRGVKYLHSM  439 (601)
T ss_pred             hcccH-HHHHHH----hcccccchhhhhHHHHHHHHHHHHHHhc
Confidence            99999 999988    3334688899999999999999999974

>PLN02876 acyl-CoA dehydrogenase

Probab=98.00  E-value=0.00016  Score=57.83  Aligned_cols=107  Identities=13%  Similarity=0.162  Sum_probs=75.4

Q ss_pred             ecccccccceEEEEEEecCC---CEEEEEEccCCCc--CHHHHHHHHHHHhcCC-CCcc--cceeeEEEeC---CeEEEE
Q 041447           35 TWSSGKDGFGSVYKGQLHTG---GLIAVKMLENSNF--SAVEFINEVSTIGRIH-HVNV--VQLLGFYSEG---SKRALV  103 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~---~~~avk~~~~~~~--~~~~~~~e~~~l~~l~-~~~i--~~~~~~~~~~---~~~~lv  103 (148)
                      ...++.|.+..+|......+   ..+++|+......  ....+.+|..++..+. |+++  ++++..+.+.   +..++|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            56678898999998875433   3677776654322  3346789999999885 5654  6777766553   467899


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |||++|..+.+.      ....++..+...+..+++.+|..||+
T Consensus       123 ME~v~G~~~~~~------~~~~~~~~~r~~l~~~l~~~La~LH~  160 (822)
T PLN02876        123 MEYLEGRIFVDP------KLPGVAPERRRAIYRATAKVLAALHS  160 (822)
T ss_pred             EEecCCcccCCc------cCCCCCHHHHHHHHHHHHHHHHHHhC
Confidence            999998544321      11235677778899999999999996

>PRK10593 hypothetical protein; Provisional

Probab=97.96  E-value=0.00039  Score=49.17  Aligned_cols=106  Identities=12%  Similarity=0.081  Sum_probs=73.2

Q ss_pred             CceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCC---CcccceeeEEEe---CCeEEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHH---VNVVQLLGFYSE---GSKRALVY  104 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~---~~~~~lv~  104 (148)
                      ...-.+.||.|..+.||.....+++ +.+|.. +.......+..|...|..+..   ..++++++.+..   .+..++||
T Consensus        15 ~~~~~~~i~~G~~~~vy~~~~~~~~-~~~k~~-~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm   92 (297)
T PRK10593         15 KLSRVECISEQPYAALWALYDSQGN-PMPLMA-RSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL   92 (297)
T ss_pred             hhheeeecCCccceeEEEEEcCCCC-EEEEEe-cccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence            3445677899999999998765454 555664 322234467888888887742   467888877643   36689999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |+++++++.+..         .+......+..+++.+|+-||+
T Consensus        93 E~i~G~~~~~~~---------~~~~~~~~l~~~l~~~La~LH~  126 (297)
T PRK10593         93 ERLRGVSVEAPA---------RTPERWEQLKDQIVEGLLAWHR  126 (297)
T ss_pred             eccCCEecCCCC---------CCHHHHHHHHHHHHHHHHHHhC
Confidence            999998776511         2233455667788889888886

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.83  E-value=0.00045  Score=45.93  Aligned_cols=105  Identities=10%  Similarity=0.103  Sum_probs=67.9

Q ss_pred             ecccccccceEEEEEEecC-------CCEEEEEEccCCCc----------------------CHHH-----HHHHHHHHh
Q 041447           35 TWSSGKDGFGSVYKGQLHT-------GGLIAVKMLENSNF----------------------SAVE-----FINEVSTIG   80 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~-------~~~~avk~~~~~~~----------------------~~~~-----~~~e~~~l~   80 (148)
                      ...||.|.-+.||.|...+       +..+|+|+.+.+..                      ....     ..+|...|.
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            3568999999999998442       47899997743110                      1111     347888888


Q ss_pred             cCCC--CcccceeeEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhh-hc
Q 041447           81 RIHH--VNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL-HN  147 (148)
Q Consensus        81 ~l~~--~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~l-H~  147 (148)
                      ++..  -+++++++.    ...+|+|||+.+..+....    .....++..+...+..+++.+|..+ |+
T Consensus        82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~----Lkd~~~~~~~~~~i~~~i~~~l~~l~H~  143 (197)
T cd05146          82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPK----LKDAKLNDEEMKNAYYQVLSMMKQLYKE  143 (197)
T ss_pred             HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchh----hhccccCHHHHHHHHHHHHHHHHHHHHh
Confidence            8853  456666643    4567999999764332211    1112345566677889999999988 64

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.81  E-value=4e-06  Score=59.28  Aligned_cols=69  Identities=19%  Similarity=0.386  Sum_probs=58.8

Q ss_pred             HhcCCCCcccceeeEEEeC-----CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           79 IGRIHHVNVVQLLGFYSEG-----SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        79 l~~l~~~~i~~~~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +-++-|.||++++.+|.+.     ....+++||++.|++.+++++.+.....+....-.++.-||+.||.|||+
T Consensus       121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs  194 (458)
T KOG1266|consen  121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS  194 (458)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc
Confidence            4455699999999888653     44789999999999999998766677788888889999999999999996

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=97.80  E-value=3.3e-06  Score=67.59  Aligned_cols=111  Identities=14%  Similarity=0.148  Sum_probs=86.6

Q ss_pred             CceeecccccccceEEEEEEecCCCEEEEEEccCCCc--CHHHHHHHHHH--HhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNF--SAVEFINEVST--IGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~--~~~~~~~e~~~--l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++...+.||.+.|=++.+|+++.|. +++|++-+...  +...+.++++-  ....++||.+.+.-+-......|||-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            5788999999999999999887565 88999865432  33444433332  4445899999887777777788899999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ..+ +|.|.+    .....+..-+-+=|+.|++.||.-||.
T Consensus       103 vkh-nLyDRl----STRPFL~~iEKkWiaFQLL~al~qcH~  138 (1431)
T KOG1240|consen  103 VKH-NLYDRL----STRPFLVLIEKKWIAFQLLKALSQCHK  138 (1431)
T ss_pred             Hhh-hhhhhh----ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            977 899988    666667788888899999999999996

>PLN00181 protein SPA1-RELATED; Provisional

Probab=97.78  E-value=9.8e-06  Score=64.34  Aligned_cols=60  Identities=17%  Similarity=0.029  Sum_probs=45.4

Q ss_pred             CcccceeeEE-------EeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           85 VNVVQLLGFY-------SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        85 ~~i~~~~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||..+++++       ......+.++|++ +++|.+++..   ....+++..+..++.||+.||+|||++
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~   99 (793)
T PLN00181         33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN---PDRSVDAFECFHVFRQIVEIVNAAHSQ   99 (793)
T ss_pred             HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc---ccccccHHHHHHHHHHHHHHHHHHHhC
Confidence            4666666665       2234567778877 4599999942   235589999999999999999999974

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.72  E-value=1.8e-05  Score=59.26  Aligned_cols=115  Identities=16%  Similarity=0.123  Sum_probs=87.9

Q ss_pred             hcCceeecccccccceEEEEEEe--cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL--HTGGLIAVKMLENSNFS---AVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..+|.++..+|.+.|+.++.+..  .++..+++|........   ...-..|+.+...+ .|.+++..+..|..-...++
T Consensus       264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i  343 (524)
T KOG0601|consen  264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI  343 (524)
T ss_pred             cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence            45688889999999999998873  46888888877553222   11234555555455 48888988888887777889


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      --|||.++++...+    .....+.+...+.+..|++.++.++|+
T Consensus       344 p~e~~~~~s~~l~~----~~~~~~d~~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  344 PLEFCEGGSSSLRS----VTSQMLDEDPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             chhhhcCcchhhhh----HHHHhcCcchhhhhHHHHHhccccccc
Confidence            99999998887655    455668889999999999999999985

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.57  E-value=0.00089  Score=44.12  Aligned_cols=112  Identities=13%  Similarity=0.110  Sum_probs=76.6

Q ss_pred             eecccccccceEEEEEEecCCCEEEEEEccCCCc-----C----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           34 LTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNF-----S----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        34 ~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~-----~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ....+.+|+-+.|+.+.+. |+..++|.-.....     +    ..+..+|+..+.++.--.|....-++.+...-.|.|
T Consensus        11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            4566789999999998876 77777775322111     1    234678999888887667766666677777788999


Q ss_pred             eccCC-CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPN-GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||++| .++.+++...-.  ..........++.+|-..+.-||++
T Consensus        90 E~~~g~~~vk~~i~~~~~--~~~~d~~~~~~~~~iG~~igklH~n  132 (229)
T KOG3087|consen   90 EFIDGASTVKDFILSTME--DESEDEGLAELARRIGELIGKLHDN  132 (229)
T ss_pred             EeccchhHHHHHHHHHcc--CcccchhHHHHHHHHHHHHHHhhhC
Confidence            99987 467777643211  1122223368888899999988874

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=97.57  E-value=7.9e-05  Score=54.22  Aligned_cols=60  Identities=15%  Similarity=0.214  Sum_probs=48.9

Q ss_pred             CCCcccceeeEEEe---------------------------CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHH
Q 041447           83 HHVNVVQLLGFYSE---------------------------GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVA  135 (148)
Q Consensus        83 ~~~~i~~~~~~~~~---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~  135 (148)
                      +||||+++.+.|.+                           +..+|+||..++. +|.+++.     .++.+.....-++
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~-----~~~~s~r~~~~~l  347 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLW-----TRHRSYRTGRVIL  347 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHh-----cCCCchHHHHHHH
Confidence            69999999888743                           2348999999887 8999882     3456788888999


Q ss_pred             HHHHHHHhhhhcC
Q 041447          136 LGTARGIEYLHNG  148 (148)
Q Consensus       136 ~qi~~~l~~lH~~  148 (148)
                      .|+++|+.|||.+
T Consensus       348 aQlLEav~hL~~h  360 (598)
T KOG4158|consen  348 AQLLEAVTHLHKH  360 (598)
T ss_pred             HHHHHHHHHHHHc
Confidence            9999999999974

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.55  E-value=0.0013  Score=44.23  Aligned_cols=101  Identities=21%  Similarity=0.256  Sum_probs=71.7

Q ss_pred             ecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCC--CcccceeeEEE---eCCeEEEEEeccCC
Q 041447           35 TWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHH--VNVVQLLGFYS---EGSKRALVYEYMPN  109 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~---~~~~~~lv~e~~~~  109 (148)
                      ++.++.|..+.+|.....+ ..+++|..... .......+|..++..+..  ..+++++....   .....+++|++++|
T Consensus         2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g   79 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG   79 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT-SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred             CccCCCCCeeeEEEEEECC-cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence            3567889899999998775 58899987654 334456778777777642  24566665432   24457899999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      .++..          ..+......++.+++..+.-||+
T Consensus        80 ~~~~~----------~~~~~~~~~~~~~~~~~l~~lh~  107 (239)
T PF01636_consen   80 RPLDD----------ELSPEQRPELLRQLGRALAQLHQ  107 (239)
T ss_dssp             EEHHH----------TSTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccc----------cccccccccccccchhhhhhccc
Confidence            77765          24677788888999999998885

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.54  E-value=0.0019  Score=43.89  Aligned_cols=100  Identities=21%  Similarity=0.312  Sum_probs=68.4

Q ss_pred             cccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCC--CcccceeeEEEeCCeEEEEEeccCCCC-h
Q 041447           36 WSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHH--VNVVQLLGFYSEGSKRALVYEYMPNGS-L  112 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~lv~e~~~~g~-L  112 (148)
                      .++|+|..+.||..   .+..+++|.... ........+|.+.+..+..  -.+++++......+...++||+++|.+ +
T Consensus         7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~-~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~   82 (226)
T TIGR02172         7 TQTGEGGNGESYTH---KTGKWMLKLYNP-GFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF   82 (226)
T ss_pred             eeecCCCCcceeEe---cCCCEEEEeCCC-CCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence            56799999999974   244577887754 3344557889888888753  335777777777777889999999864 3


Q ss_pred             hhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          113 DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       113 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ...+        ..+......++.+++..+.-||+
T Consensus        83 ~~~~--------~~~~~~~~~l~~~la~~l~~lH~  109 (226)
T TIGR02172        83 SRII--------SDNPSRLEEIAKIFAEMAKKLHS  109 (226)
T ss_pred             hhhh--------cCCHHHHHHHHHHHHHHHHHHhC
Confidence            2222        12344445677778888887885

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.40  E-value=0.00017  Score=54.24  Aligned_cols=115  Identities=17%  Similarity=0.101  Sum_probs=87.4

Q ss_pred             cCceeeccccc--ccceEEEEEEe---cCCCEEEEEEccCCC---cCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeE
Q 041447           30 SGLDLTWSSGK--DGFGSVYKGQL---HTGGLIAVKMLENSN---FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        30 ~~~~~~~~lg~--g~~~~v~~~~~---~~~~~~avk~~~~~~---~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~  100 (148)
                      ..+.....+|.  |.+|.+|.+..   .++..+|+|.-....   .....-.+|......+ .|++.++.+..++..+..
T Consensus       114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l  193 (524)
T KOG0601|consen  114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL  193 (524)
T ss_pred             hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence            35567788899  99999999873   367778888643311   1222334666666666 499999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHH----HHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTAR----GIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~----~l~~lH~~  148 (148)
                      ++-+|.|. .+|..+..   .....++...++..+.+...    ||.++|.+
T Consensus       194 fiqtE~~~-~sl~~~~~---~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~  241 (524)
T KOG0601|consen  194 FIQTELCG-ESLQSYCH---TPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN  241 (524)
T ss_pred             eeeecccc-chhHHhhh---cccccCCchhhhhHHhhhhhcccccccccCCC
Confidence            99999996 47877663   34456899999999999999    99999974

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.25  E-value=0.0044  Score=42.34  Aligned_cols=96  Identities=13%  Similarity=0.125  Sum_probs=62.8

Q ss_pred             ccccc-eEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEEeccCCCChhhcc
Q 041447           39 GKDGF-GSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHI  116 (148)
Q Consensus        39 g~g~~-~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l  116 (148)
                      ..|.. +.||+.... +..+.+|......  .....+|+.++..+. +.-++++++.....+..+++||+++|.++....
T Consensus         7 ~~g~~~~~v~~~~~~-~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~   83 (244)
T cd05150           7 TEGQSGATVYRLDGK-NPGLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAALW   83 (244)
T ss_pred             CCCCCcCeEEEEcCC-CCcEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHhh
Confidence            44444 678888654 4677888775432  334567888777763 345667777766666788999999997775432


Q ss_pred             cccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          117 FPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       117 ~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                          .      ......++.++...+.-||+
T Consensus        84 ----~------~~~~~~~~~~l~~~l~~lH~  104 (244)
T cd05150          84 ----E------ELEPERLVDALAEALRRLHA  104 (244)
T ss_pred             ----c------ccCHHHHHHHHHHHHHHHhc
Confidence                0      11223567777888888885

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.21  E-value=0.00066  Score=51.45  Aligned_cols=81  Identities=16%  Similarity=0.213  Sum_probs=53.5

Q ss_pred             cccccccceEEEEEEecCCCEEEEEEccCCCcCH---------------------------H--------------HHHH
Q 041447           36 WSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSA---------------------------V--------------EFIN   74 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~---------------------------~--------------~~~~   74 (148)
                      +.++.++-|+||.|+..+|+.||||++.+.-...                           .              ++.+
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            6788999999999998889999999986622111                           0              1345


Q ss_pred             HHHHHhcC----C-CCcccceeeEEEeCCeEEEEEeccCCCChhhcc
Q 041447           75 EVSTIGRI----H-HVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHI  116 (148)
Q Consensus        75 e~~~l~~l----~-~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l  116 (148)
                      |+..+..+    + .|++.-..=+++..+.-.|+|||+.|-.+.+..
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~  257 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIA  257 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHH
Confidence            55555444    2 343332222233356678999999998777764

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.21  E-value=0.0043  Score=40.89  Aligned_cols=99  Identities=13%  Similarity=0.116  Sum_probs=67.3

Q ss_pred             ccccccceEEEEEEecCCCEEEEEEccCCCc-----C----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           37 SSGKDGFGSVYKGQLHTGGLIAVKMLENSNF-----S----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        37 ~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~-----~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .+++|+-+.|+.+.+- |.++++|.-.++.-     +    ..+..+|+.++..+..-.|+.+.=+..+++...|+|||+
T Consensus         3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I   81 (204)
T COG3642           3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI   81 (204)
T ss_pred             hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence            4688999999988654 44566775333221     1    123678999998887666666666667788888999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +|..|.+.+...           ...++..+-.-+.-||.
T Consensus        82 ~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~  110 (204)
T COG3642          82 EGELLKDALEEA-----------RPDLLREVGRLVGKLHK  110 (204)
T ss_pred             CChhHHHHHHhc-----------chHHHHHHHHHHHHHHh
Confidence            998888887321           14455666666666665

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.16  E-value=0.0015  Score=42.70  Aligned_cols=78  Identities=17%  Similarity=0.241  Sum_probs=55.3

Q ss_pred             eeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCccc-ceeeEEEeCCeEEEEEeccCCCC
Q 041447           33 DLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVV-QLLGFYSEGSKRALVYEYMPNGS  111 (148)
Q Consensus        33 ~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~lv~e~~~~g~  111 (148)
                      .....|++|+++.||.|.+. +..+|+|+-.. +.....+..|+.+|..+...++. +++.+    +...+.|||+.|..
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~-ds~r~~l~kEakiLeil~g~~~~p~vy~y----g~~~i~me~i~G~~   98 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWR-GGEVALKVRRR-DSPRRNLEKEAKILEILAGEGVTPEVYFY----GEDFIRMEYIDGRP   98 (201)
T ss_pred             hhhhhhhcccccEEEEeecc-CceEEEEEecC-CcchhhHHHHHHHHHHhhhcCCCceEEEe----chhhhhhhhhcCcc
Confidence            34567899999999999987 66888886654 44566788999988887654443 33322    22346699999977


Q ss_pred             hhhcc
Q 041447          112 LDRHI  116 (148)
Q Consensus       112 L~~~l  116 (148)
                      |.+.-
T Consensus        99 L~~~~  103 (201)
T COG2112          99 LGKLE  103 (201)
T ss_pred             hhhhh
Confidence            77654

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.12  E-value=0.00014  Score=56.13  Aligned_cols=116  Identities=22%  Similarity=0.188  Sum_probs=85.3

Q ss_pred             hcCceeecccccccceEEEEEEe--cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL--HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l  102 (148)
                      ...|.+...+|+|+|+.+-....  .+...++.|.+.....+   ......|..+=..+. |+|++.+++.....+..++
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence            44577888899999999877763  34555666666554422   222334555444555 9999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhh
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH  146 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH  146 (148)
                      .+++..|+++.+-+..  ......+...+..++.|+..++.|+|
T Consensus        99 ~~~~s~g~~~f~~i~~--~~~~~~~~~~~~~~~~ql~s~l~~~H  140 (601)
T KOG0590|consen   99 SLSYSDGGSLFSKISH--PDSTGTSSSSASRYLPQLNSGLSYLH  140 (601)
T ss_pred             ccCccccccccccccc--CCccCCCCcchhhhhhhhccCccccC
Confidence            9999999999887621  12224677788889999999999999

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=96.99  E-value=0.021  Score=39.92  Aligned_cols=100  Identities=15%  Similarity=0.086  Sum_probs=62.9

Q ss_pred             EEEEEecCCCEEEEEEccCCCc------------CHHHHHHHHHHHhcCCCCcccc--eeeEEEe-----CCeEEEEEec
Q 041447           46 VYKGQLHTGGLIAVKMLENSNF------------SAVEFINEVSTIGRIHHVNVVQ--LLGFYSE-----GSKRALVYEY  106 (148)
Q Consensus        46 v~~~~~~~~~~~avk~~~~~~~------------~~~~~~~e~~~l~~l~~~~i~~--~~~~~~~-----~~~~~lv~e~  106 (148)
                      |.+... .|+.+.+|.......            ....+.+|...+..+..-+|..  +..+.+.     ....++|||+
T Consensus        38 vvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~  116 (268)
T PRK15123         38 TLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITED  116 (268)
T ss_pred             EEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEee
Confidence            445444 367788897644331            1113678888877774333333  3334432     2347899999


Q ss_pred             cCCC-ChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNG-SLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g-~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++. +|.+++...  .....+......++.+++..+.-||++
T Consensus       117 l~~~~sL~~~~~~~--~~~~~~~~~~~~ll~~la~~i~~LH~~  157 (268)
T PRK15123        117 LAPTISLEDYCADW--ATNPPDPRLKRMLIKRVATMVRDMHAA  157 (268)
T ss_pred             CCCCccHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9885 788876321  123345677778999999999999974

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=96.89  E-value=0.0047  Score=43.47  Aligned_cols=117  Identities=20%  Similarity=0.197  Sum_probs=66.4

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCC----------CCcccceeeEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIH----------HVNVVQLLGFYS   95 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~----------~~~i~~~~~~~~   95 (148)
                      .+..+..||.|+++.||.+++ .++.++|+|++......    .+++.+|......+.          |-.++..++...
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            456789999999999999996 47899999987543322    223444443333221          223333333332


Q ss_pred             e---------CC--------eEEEEEeccCCCChhhcccc---cCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           96 E---------GS--------KRALVYEYMPNGSLDRHIFP---NEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        96 ~---------~~--------~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      -         ..        +.+++|+-+. +||.+++..   .......+.......+..|+++.+++||+.
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~  164 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY  164 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc
Confidence            1         11        2456777774 488776521   111112233334456778999999999963

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=96.65  E-value=0.01  Score=45.24  Aligned_cols=52  Identities=17%  Similarity=0.216  Sum_probs=36.6

Q ss_pred             cCCCCCCcHHHHHHhhhcCce----------eecccccccceEEEEEEecCCCEEEEEEccC
Q 041447           13 NRSVDNPSYEDLRKLLDSGLD----------LTWSSGKDGFGSVYKGQLHTGGLIAVKMLEN   64 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~----------~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~   64 (148)
                      ....+..++.++..+..+++.          .-+.|+..+.|+|++|+.++|..||+|+..+
T Consensus       134 qD~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P  195 (538)
T KOG1235|consen  134 QDQAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHP  195 (538)
T ss_pred             hccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCc
Confidence            344455556655555443221          1267899999999999988899999998866

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=96.41  E-value=0.046  Score=40.43  Aligned_cols=80  Identities=13%  Similarity=0.101  Sum_probs=54.2

Q ss_pred             ecccccccceEEEEEEecCC-CEEEEEEccC------C--CcCHHHHHHHHHHHhcCC---CCcccceeeEEEeCCeEEE
Q 041447           35 TWSSGKDGFGSVYKGQLHTG-GLIAVKMLEN------S--NFSAVEFINEVSTIGRIH---HVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~-~~~avk~~~~------~--~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~l  102 (148)
                      .+.+|.|.+..||+....+| +.+++|.-.+      .  .....+...|.+.|..+.   ...+++++.+  +....++
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l  108 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT  108 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence            45789999999999997666 4789997432      1  223455667777777652   3467777654  4455789


Q ss_pred             EEeccCCCC-hhhcc
Q 041447          103 VYEYMPNGS-LDRHI  116 (148)
Q Consensus       103 v~e~~~~g~-L~~~l  116 (148)
                      |||++++.. +.+.+
T Consensus       109 VME~L~~~~~lr~~L  123 (401)
T PRK09550        109 VMEDLSDHKILRKGL  123 (401)
T ss_pred             EEecCCCccHHHHHH
Confidence            999998744 33443

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=96.41  E-value=0.057  Score=37.90  Aligned_cols=79  Identities=22%  Similarity=0.224  Sum_probs=58.0

Q ss_pred             ceeecccccccceEEEEEEecCCCEEEEEEccCCCcC-----------------------HHHHHHHHHHHhcCCCC--c
Q 041447           32 LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS-----------------------AVEFINEVSTIGRIHHV--N   86 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~-----------------------~~~~~~e~~~l~~l~~~--~   86 (148)
                      ..+++.||.|.-+.||.|....|.++++|.=+....+                       ...+.+|.+.|..+...  .
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~  172 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK  172 (304)
T ss_pred             HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence            3467899999999999999888999999954321110                       11267899999998654  7


Q ss_pred             ccceeeEEEeCCeEEEEEeccCCCChhh
Q 041447           87 VVQLLGFYSEGSKRALVYEYMPNGSLDR  114 (148)
Q Consensus        87 i~~~~~~~~~~~~~~lv~e~~~~g~L~~  114 (148)
                      +++++++    +..+++||+++|-.|..
T Consensus       173 VP~P~~~----nRHaVvMe~ieG~eL~~  196 (304)
T COG0478         173 VPKPIAW----NRHAVVMEYIEGVELYR  196 (304)
T ss_pred             CCCcccc----ccceeeeehcccceeec
Confidence            7777764    44679999999865544

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=96.20  E-value=0.13  Score=34.42  Aligned_cols=81  Identities=12%  Similarity=0.163  Sum_probs=55.6

Q ss_pred             eecccccccceEEEEEEecCCCEEEEEEccCCC-----------------cCHHHHHHHHHHHhcCC------CCcccce
Q 041447           34 LTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSN-----------------FSAVEFINEVSTIGRIH------HVNVVQL   90 (148)
Q Consensus        34 ~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~-----------------~~~~~~~~e~~~l~~l~------~~~i~~~   90 (148)
                      -...||+|+.-.||.-.  .+....||+.....                 ....+..+|+.....+.      +.+|.++
T Consensus         5 ~~~~i~~G~~R~cy~HP--~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~   82 (199)
T PF10707_consen    5 ESDLIAQGGERDCYQHP--DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF   82 (199)
T ss_pred             CCcccccCCCceEEECC--CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence            34678999998888644  34456788886655                 11233556665544443      8899999


Q ss_pred             eeEEEeCCeEEEEEeccCC------CChhhcc
Q 041447           91 LGFYSEGSKRALVYEYMPN------GSLDRHI  116 (148)
Q Consensus        91 ~~~~~~~~~~~lv~e~~~~------g~L~~~l  116 (148)
                      +|+..++.-..+|+|.+..      .+|.+++
T Consensus        83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l  114 (199)
T PF10707_consen   83 YGFVETNLGLGLVVELIRDADGNISPTLEDYL  114 (199)
T ss_pred             eEEEecCCceEEEEEEEECCCCCcCccHHHHH
Confidence            9999998888899998643      3566666

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PRK09902 hypothetical protein; Provisional

Probab=96.13  E-value=0.23  Score=33.57  Aligned_cols=126  Identities=16%  Similarity=0.113  Sum_probs=77.4

Q ss_pred             CcHHHHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccC----C---CcCHHHHHHHHHHHhcCCCC--cccc
Q 041447           19 PSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLEN----S---NFSAVEFINEVSTIGRIHHV--NVVQ   89 (148)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~----~---~~~~~~~~~e~~~l~~l~~~--~i~~   89 (148)
                      ..++.++....+-++--+. |+||-+-|+.-... |..+=+|....    +   ......+.+|...+..+..-  .+++
T Consensus         8 ~~f~~~w~~~~~wve~pN~-~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~   85 (216)
T PRK09902          8 DEFNHWWATEGDWVEEPNY-RRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPK   85 (216)
T ss_pred             hhHHHHHhCCCceecCCCc-CCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCc
Confidence            4456666665533332222 45888788876654 44567787652    1   12345688999998887533  3444


Q ss_pred             eeeEEEe----CCeEEEEEeccCC-CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           90 LLGFYSE----GSKRALVYEYMPN-GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        90 ~~~~~~~----~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +......    ....+||+|-+.+ -||.+++...  ...+.+......+..+++..++-||+.
T Consensus        86 pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~--~~~~~~~~~k~~il~~va~~ia~LH~~  147 (216)
T PRK09902         86 IVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQH--AVSPYSDEVRQAMLKAVALAFKKMHSV  147 (216)
T ss_pred             cceeeeeccCCceEEEEEEEeCCCCccHHHHHhcC--CcCCcchHHHHHHHHHHHHHHHHHHHC
Confidence            4422111    2236799998764 4788776321  123456777788999999999999974

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=96.11  E-value=0.085  Score=38.90  Aligned_cols=107  Identities=16%  Similarity=0.141  Sum_probs=69.4

Q ss_pred             eeecccccccceEEEEEEecCCCEEEEEEccCCCc---C-------------------H-----HHHHHHHHHHhcCCCC
Q 041447           33 DLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNF---S-------------------A-----VEFINEVSTIGRIHHV   85 (148)
Q Consensus        33 ~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~---~-------------------~-----~~~~~e~~~l~~l~~~   85 (148)
                      .+...|..|.-+.||.+...+|..+|||+.+.+-.   +                   +     -....|++.|.++...
T Consensus       147 ~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a  226 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA  226 (520)
T ss_pred             ecccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            34577889999999999988899999998754211   0                   0     1145788888888777


Q ss_pred             cccceeeEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhh
Q 041447           86 NVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL  145 (148)
Q Consensus        86 ~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~l  145 (148)
                      .|+..--+....  ..|||+|+.. +=+...   ....-.++...+..+-.|++.-|.-|
T Consensus       227 GIP~PePIlLk~--hVLVM~FlGr-dgw~aP---kLKd~~ls~~ka~~~Y~~~v~~MR~l  280 (520)
T KOG2270|consen  227 GIPCPEPILLKN--HVLVMEFLGR-DGWAAP---KLKDASLSTSKARELYQQCVRIMRRL  280 (520)
T ss_pred             CCCCCCceeeec--ceEeeeeccC-CCCcCc---ccccccCChHHHHHHHHHHHHHHHHH
Confidence            777655544433  5699999953 333221   12334466666666666666665543

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=96.06  E-value=0.066  Score=36.28  Aligned_cols=96  Identities=16%  Similarity=0.154  Sum_probs=55.5

Q ss_pred             cccccccceEEEEEEecC--CCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEEeccCCCCh
Q 041447           36 WSSGKDGFGSVYKGQLHT--GGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVYEYMPNGSL  112 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~~--~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~g~L  112 (148)
                      +.|..|-...+|+....+  +..+++|+.........+..+|..++..+. +.-.++++...  .  -.+++||++|.++
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~--~--~~~l~e~i~G~~l   79 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATF--Q--NGLIYEFIPGRTL   79 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEe--C--CcEEEEeeCCCcC
Confidence            455667778899887543  567888876543222222346777777764 22334444332  2  2379999998665


Q ss_pred             hhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          113 DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       113 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ....         +.   ...++.+++..|+-+|+
T Consensus        80 ~~~~---------~~---~~~~~~~la~~l~~lH~  102 (235)
T cd05157          80 EPED---------LR---NPKIYRLIARELAKLHS  102 (235)
T ss_pred             CHHH---------cc---ChHHHHHHHHHHHHHhc
Confidence            4221         10   02245667777777774

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.88  E-value=0.13  Score=36.38  Aligned_cols=76  Identities=16%  Similarity=0.240  Sum_probs=45.3

Q ss_pred             ceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcC---CCCcccceeeEEEeCCeEEEEEeccC
Q 041447           32 LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRI---HHVNVVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      .+-.+.++.|....+|+.. .+++.+-+|.-...  ....+..|..-|+.+   ..-.+++++++....+..+|++||++
T Consensus        19 i~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~--~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~   95 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLD-TDGGSYFVKVNSES--GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLE   95 (288)
T ss_dssp             --EEEEE--SSSSEEEEEE-TTS-EEEEEEEEGG--GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE---
T ss_pred             eeeeEecCCCChhheEEEE-CCCccEEEEecChh--hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeec
Confidence            3446778888889888877 45777888877632  223456676666666   45678899988877777899999997


Q ss_pred             CC
Q 041447          109 NG  110 (148)
Q Consensus       109 ~g  110 (148)
                      .+
T Consensus        96 ~~   97 (288)
T PF03881_consen   96 MG   97 (288)
T ss_dssp             --
T ss_pred             CC
Confidence            64

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=95.48  E-value=0.15  Score=34.71  Aligned_cols=96  Identities=18%  Similarity=0.104  Sum_probs=56.5

Q ss_pred             cccccccce-EEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCC---cccceeeEEEeC---CeEEEEEeccC
Q 041447           36 WSSGKDGFG-SVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHV---NVVQLLGFYSEG---SKRALVYEYMP  108 (148)
Q Consensus        36 ~~lg~g~~~-~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~---~~~~lv~e~~~  108 (148)
                      +.++.|+.. .||..    +..+++|.... ........+|...+..+...   .++.+++.....   +..+++|++++
T Consensus         3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~   77 (235)
T cd05155           3 EPVDSGGTDNATFRL----GDDMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE   77 (235)
T ss_pred             eeccCCCcccceEEc----CCceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence            345655554 47765    33567776543 33344678888888777421   344444333221   23578999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |.++.+..         ...  ...+..+++..+.-||+
T Consensus        78 G~~l~~~~---------~~~--~~~l~~~la~~l~~LH~  105 (235)
T cd05155          78 GETATAAA---------LSD--PSEFAEDLADFLAALRQ  105 (235)
T ss_pred             CCCCCccc---------cCC--HHHHHHHHHHHHHHHhC
Confidence            98775432         111  22567777777777885

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=95.35  E-value=0.0034  Score=48.62  Aligned_cols=109  Identities=12%  Similarity=0.074  Sum_probs=69.2

Q ss_pred             ceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCc-ccceeeEEEeCCeEEEEEeccCCC
Q 041447           32 LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVN-VVQLLGFYSEGSKRALVYEYMPNG  110 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~e~~~~g  110 (148)
                      +.+...+++++.+.+++.+....+....+.+...    ....-++++|.+++||| .+..++.+......+++++++.++
T Consensus       244 s~~fh~fvK~altknpKkRptaeklL~h~fvs~~----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~  319 (829)
T KOG0576|consen  244 SEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTG  319 (829)
T ss_pred             hHHHHHHHHHHhcCCCccCCChhhheeceeeccc----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCC
Confidence            3444556889999999887543444444544432    23345778899999999 666677777788899999999876


Q ss_pred             -ChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          111 -SLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       111 -~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                       +-...+.   ...-.+...+.....+.-+.+++++|+
T Consensus       320 rs~~~~~~---~se~~~~~~~~~~~~r~et~~l~~l~~  354 (829)
T KOG0576|consen  320 RSSALEMT---VSEIALEQYQFAYPLRKETRPLAELHS  354 (829)
T ss_pred             ccccccCC---hhhHhhhhhhhhhhhhhhccccccccc
Confidence             2222221   112223444445555666677778775

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=95.35  E-value=0.0067  Score=37.03  Aligned_cols=30  Identities=20%  Similarity=0.242  Sum_probs=26.8

Q ss_pred             ecccccccceEEEEEEecCCCEEEEEEccC
Q 041447           35 TWSSGKDGFGSVYKGQLHTGGLIAVKMLEN   64 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~~~~avk~~~~   64 (148)
                      .+.++.|+.|+||+|+..+|+.||||+..+
T Consensus        16 ~~PlasASiaQVh~a~l~~g~~VaVKV~rP   45 (119)
T PF03109_consen   16 PEPLASASIAQVHRARLKDGEEVAVKVQRP   45 (119)
T ss_pred             cchhhheehhhheeeeecccchhhhhhcch
Confidence            467899999999999988899999998865

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.19  E-value=0.18  Score=33.37  Aligned_cols=65  Identities=20%  Similarity=0.240  Sum_probs=39.1

Q ss_pred             EEEEEEecCCCEEEEEEccCCCc-----------------------C----HHHHHHHHHHHhcCCCC--cccceeeEEE
Q 041447           45 SVYKGQLHTGGLIAVKMLENSNF-----------------------S----AVEFINEVSTIGRIHHV--NVVQLLGFYS   95 (148)
Q Consensus        45 ~v~~~~~~~~~~~avk~~~~~~~-----------------------~----~~~~~~e~~~l~~l~~~--~i~~~~~~~~   95 (148)
                      .||.|...+|..+|+|+......                       +    .....+|...|..+..-  ++++++++. 
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            37888877788999997744111                       0    01256899999999754  566666442 


Q ss_pred             eCCeEEEEEeccC--CCChh
Q 041447           96 EGSKRALVYEYMP--NGSLD  113 (148)
Q Consensus        96 ~~~~~~lv~e~~~--~g~L~  113 (148)
                         ...|||||+.  |..+.
T Consensus        80 ---~~~ivME~I~~~G~~~~   96 (188)
T PF01163_consen   80 ---RNVIVMEYIGEDGVPLP   96 (188)
T ss_dssp             ---TTEEEEE--EETTEEGG
T ss_pred             ---CCEEEEEecCCCccchh
Confidence               2469999998  54443

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=94.89  E-value=0.15  Score=33.79  Aligned_cols=69  Identities=26%  Similarity=0.251  Sum_probs=48.0

Q ss_pred             HHHHHHhcCCC-CcccceeeEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           74 NEVSTIGRIHH-VNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        74 ~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      .|.-+++.+++ +++++++|.|-    -.++.|+...+++.... ..-......++..+..++.+++..+.++++
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~-~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~   77 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIY-RPLSQFLQSPWEQRAKIALQLLELLEELDH   77 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccc-cccccccccCHHHHHHHHHHHHHHHHHHhc
Confidence            46667777764 69999999983    24688998866553210 000111235899999999999999999876

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=94.63  E-value=0.0066  Score=45.56  Aligned_cols=69  Identities=22%  Similarity=0.316  Sum_probs=54.1

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEe
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSE   96 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~   96 (148)
                      ...++..+..+|.|+||+|+.+.. .++..+|||.|...+..  ..+..++...+..+.|++++.++-.|..
T Consensus        47 ~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~  118 (516)
T KOG1033|consen   47 EANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYE  118 (516)
T ss_pred             hhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceec
Confidence            456788899999999999999984 35667899988665443  4457788888888999999998766643

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=94.29  E-value=0.55  Score=32.66  Aligned_cols=80  Identities=15%  Similarity=0.037  Sum_probs=51.9

Q ss_pred             eecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCC-CCh
Q 041447           34 LTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN-GSL  112 (148)
Q Consensus        34 ~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~-g~L  112 (148)
                      ....+-.|..+.|+.++..+|.+.++|+..+......+. .....|...+-...+++++.-  ...-.|++|.+.+ .+|
T Consensus         6 ~~~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~~~~E~-~g~~~L~~w~G~GaVrll~~d--~~~~AlLLErl~~g~~L   82 (253)
T PF04655_consen    6 PDGPPAHGSSSLVVPVRRADGTPAVLKLAPPHAEAEHEA-RGEAALRWWNGRGAVRLLAAD--PERGALLLERLDPGRSL   82 (253)
T ss_pred             cCCCCCCCcceEEEEEEcCCCCeEEEEecCCcccchhhh-hHHhHhheeCCCCceeeeccc--cccchhhhhhccCCCch
Confidence            344556788899999998889999999876543322221 122446666667778887643  3446688999854 456


Q ss_pred             hhcc
Q 041447          113 DRHI  116 (148)
Q Consensus       113 ~~~l  116 (148)
                      .+..
T Consensus        83 ~~~~   86 (253)
T PF04655_consen   83 ASLP   86 (253)
T ss_pred             hhcc
Confidence            5443

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=93.96  E-value=0.42  Score=33.77  Aligned_cols=95  Identities=19%  Similarity=0.261  Sum_probs=54.9

Q ss_pred             ccccccceEEEEEEecC-------CCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCc-ccceeeEEEeCCeEEEEEeccC
Q 041447           37 SSGKDGFGSVYKGQLHT-------GGLIAVKMLENSNFSAVEFINEVSTIGRIHHVN-VVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        37 ~lg~g~~~~v~~~~~~~-------~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      .+..|-...+|+....+       ++.+++|+.........+..+|..++..+...+ .++++....    -.+++||++
T Consensus         5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~----~~~v~e~i~   80 (302)
T cd05156           5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFP----NGRIEEFIP   80 (302)
T ss_pred             EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeC----CCchhheeC
Confidence            44555556788877543       478888986553333234567777776664222 334444332    135788888


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |.++....    ..    .    ..++.+++..|+-||+
T Consensus        81 G~~l~~~~----~~----~----~~~~~~ia~~L~~lH~  107 (302)
T cd05156          81 SRTLTTEE----LR----D----PDISAEIARRMAKLHS  107 (302)
T ss_pred             CCcCCHhH----cC----C----cHHHHHHHHHHHHhhC
Confidence            76554321    00    0    1356788888888886

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>TIGR02721 ycfN_thiK thiamine kinase

Probab=93.69  E-value=0.97  Score=31.14  Aligned_cols=93  Identities=10%  Similarity=0.023  Sum_probs=52.6

Q ss_pred             cccccceEEEEEEecCCCEEEEEEccCCCcCH-HHHHHHHHHHhcCCCCc-ccceeeEEEeCCeEEEEEeccCCCChhhc
Q 041447           38 SGKDGFGSVYKGQLHTGGLIAVKMLENSNFSA-VEFINEVSTIGRIHHVN-VVQLLGFYSEGSKRALVYEYMPNGSLDRH  115 (148)
Q Consensus        38 lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~-~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~e~~~~g~L~~~  115 (148)
                      +..|-.+.+|+... ++..+++|......... -+..+|..++..+.... .++++..  ..  .++++||++|..+..-
T Consensus         4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~--~~--~~~v~e~i~G~~~~~~   78 (256)
T TIGR02721         4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILV--NE--HWLLVEWLEGEVITLD   78 (256)
T ss_pred             CCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEE--eC--CEEEEEeccCcccccc
Confidence            34566677887763 46678888654422211 13467777777775322 2333332  22  3689999998665431


Q ss_pred             ccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          116 IFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       116 l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      .    .    ..    ...+.+++..|.-||+
T Consensus        79 ~----~----~~----~~~~~~la~~l~~lH~   98 (256)
T TIGR02721        79 Q----F----VA----LDLLLELAALLHQLHS   98 (256)
T ss_pred             c----c----cC----chhHHHHHHHHHHHhC
Confidence            1    0    01    1235667777777775

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PLN02756 S-methyl-5-thioribose kinase

Probab=93.65  E-value=1.8  Score=32.37  Aligned_cols=72  Identities=13%  Similarity=0.111  Sum_probs=48.2

Q ss_pred             ecccccccceEEEEEEecCCCEEEEEEccC-----CC---cCHHHHHHHHHHHhcCC---CCcccceeeEEEeCCeEEEE
Q 041447           35 TWSSGKDGFGSVYKGQLHTGGLIAVKMLEN-----SN---FSAVEFINEVSTIGRIH---HVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~~~~avk~~~~-----~~---~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~lv  103 (148)
                      .+.+|.|....||+.... ++.++||.-.+     +.   ....+...|+..|..+.   ...+++++.+..  +...++
T Consensus        37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlv  113 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIG  113 (418)
T ss_pred             EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEE
Confidence            567799999999998754 55688887652     11   13334455666666553   247778776655  446789


Q ss_pred             EeccCC
Q 041447          104 YEYMPN  109 (148)
Q Consensus       104 ~e~~~~  109 (148)
                      ||++++
T Consensus       114 ME~L~~  119 (418)
T PLN02756        114 MRYLEP  119 (418)
T ss_pred             EeecCC
Confidence            999977

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=93.46  E-value=0.096  Score=43.06  Aligned_cols=35  Identities=20%  Similarity=0.302  Sum_probs=28.3

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccC
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLEN   64 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~   64 (148)
                      ..+|..++.+..|++|.||..+++ +.+.+|+| +++
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNk  117 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INK  117 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhc-ccc
Confidence            358899999999999999999865 56778884 443

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=93.29  E-value=1.8  Score=30.45  Aligned_cols=95  Identities=15%  Similarity=0.075  Sum_probs=55.7

Q ss_pred             ecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCC--cccceeeE------EEeCCeEEEEEec
Q 041447           35 TWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHV--NVVQLLGF------YSEGSKRALVYEY  106 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~--~i~~~~~~------~~~~~~~~lv~e~  106 (148)
                      .+.+..|....+|..... +..+++|+...  ........|+.++..+...  .+++++..      ....+..++++++
T Consensus        19 i~~i~~G~~n~~y~v~~~-~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~   95 (296)
T cd05153          19 FEGISAGIENTNYFVTTD-SGRYVLTLFEK--VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF   95 (296)
T ss_pred             eecccCccccceEEEEeC-CCcEEEEEcCC--CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence            455667776788887654 44688888764  2334455666666665322  24444321      1234557899999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ++|.++..           .+.    ..+.++...|+-||.
T Consensus        96 i~G~~~~~-----------~~~----~~~~~lg~~La~lH~  121 (296)
T cd05153          96 LAGEHLTR-----------PTA----AHCRQIGEALARLHL  121 (296)
T ss_pred             CCCCCCCC-----------CCH----HHHHHHHHHHHHHHH
Confidence            99865432           111    234566677777764

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=93.26  E-value=2  Score=30.03  Aligned_cols=71  Identities=21%  Similarity=0.235  Sum_probs=46.2

Q ss_pred             ecccccccceEEEEEEecCCCEEEEEEccCCCcC--------------------HH-----HHHHHHHHHhcCC--CCcc
Q 041447           35 TWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS--------------------AV-----EFINEVSTIGRIH--HVNV   87 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~--------------------~~-----~~~~e~~~l~~l~--~~~i   87 (148)
                      ...|++|.-+.||.|...++..+|+|+.......                    ..     ....|...|.++.  +-.+
T Consensus        53 ~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv  132 (268)
T COG1718          53 VGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV  132 (268)
T ss_pred             EeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            4567788889999998777889999988552221                    01     1345666676663  3455


Q ss_pred             cceeeEEEeCCeEEEEEeccCC
Q 041447           88 VQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        88 ~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      ++.+...    ...|+|||+..
T Consensus       133 P~Pi~~~----~nVLvMEfIg~  150 (268)
T COG1718         133 PEPIAFR----NNVLVMEFIGD  150 (268)
T ss_pred             CCceeec----CCeEEEEeccC
Confidence            5555443    24589999854

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=93.15  E-value=0.38  Score=32.18  Aligned_cols=76  Identities=16%  Similarity=0.189  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHHhcCCC--CcccceeeEEEeC----CeEEEEEeccCCC-ChhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 041447           69 AVEFINEVSTIGRIHH--VNVVQLLGFYSEG----SKRALVYEYMPNG-SLDRHIFPNEGRGKSFSWEKLHEVALGTARG  141 (148)
Q Consensus        69 ~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~----~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~  141 (148)
                      .....+|...+..+..  -.++.+.++.+..    ...++++|++++. +|.+++.    .....+......++.+++..
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~----~~~~~~~~~~~~ll~~l~~~  130 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ----QWEQLDPSQRRELLRALARL  130 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH----hhcccchhhHHHHHHHHHHH
Confidence            3456778777776643  3344555554442    2357999999874 7888873    22225667778899999999


Q ss_pred             HhhhhcC
Q 041447          142 IEYLHNG  148 (148)
Q Consensus       142 l~~lH~~  148 (148)
                      +.-||++
T Consensus       131 i~~lH~~  137 (206)
T PF06293_consen  131 IAKLHDA  137 (206)
T ss_pred             HHHHHHC
Confidence            9999964

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=91.60  E-value=3.2  Score=28.47  Aligned_cols=90  Identities=14%  Similarity=0.086  Sum_probs=51.5

Q ss_pred             HhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHH----------HHHHHHHHhcCCCC---cccceee
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE----------FINEVSTIGRIHHV---NVVQLLG   92 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~----------~~~e~~~l~~l~~~---~i~~~~~   92 (148)
                      .+...+|+..+++......-|..-... ++.+++|.........++          ..+.+..+..+...   ....++-
T Consensus        27 ~i~~~~~~~~kv~k~~~r~~ValIei~-~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl  105 (229)
T PF06176_consen   27 KILDNNYKIIKVFKNTKRNYVALIEID-GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL  105 (229)
T ss_pred             HHHhCCceEEEeecCCCccEEEEEEEC-CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence            344567888888888777666555544 778899987664433222          22333333333222   2222222


Q ss_pred             EEE-----eCCeEEEEEeccCCCChhhcc
Q 041447           93 FYS-----EGSKRALVYEYMPNGSLDRHI  116 (148)
Q Consensus        93 ~~~-----~~~~~~lv~e~~~~g~L~~~l  116 (148)
                      +.+     -.....++|||++|..|.+..
T Consensus       106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~  134 (229)
T PF06176_consen  106 AAEKKIFRYTSSYVLLMEYIEGVELNDIE  134 (229)
T ss_pred             eeeeeeccceeEEEEEEEEecCeecccch
Confidence            221     234466899999998876654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=90.71  E-value=4.6  Score=28.69  Aligned_cols=96  Identities=14%  Similarity=0.052  Sum_probs=53.6

Q ss_pred             ecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCC--cccceeeEE------EeCCeEEEEEec
Q 041447           35 TWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHV--NVVQLLGFY------SEGSKRALVYEY  106 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~--~i~~~~~~~------~~~~~~~lv~e~  106 (148)
                      ...++.|....+|.....++ .+++|..... ........|..++..+...  .+++++...      ...+..+++++|
T Consensus        27 i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~-~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~  104 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTTDVG-RYILTLYEKR-VKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEF  104 (307)
T ss_pred             ccccCCccccceEEEEeCCC-cEEEEEecCC-CCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEe
Confidence            45667776678898765444 5778876542 2233444556655555321  234443321      124567899999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ++|..+..          . ...    .+.++...|+-||.
T Consensus       105 i~G~~~~~----------~-~~~----~~~~~G~~LA~lH~  130 (307)
T TIGR00938       105 LQGLSVGR----------P-TAM----HCRPVGEVLAWMHL  130 (307)
T ss_pred             CCCCCCCC----------C-CHH----HHHHHHHHHHHHHh
Confidence            98855421          0 111    24566677777774

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=90.33  E-value=4  Score=29.52  Aligned_cols=105  Identities=18%  Similarity=0.109  Sum_probs=57.2

Q ss_pred             ceeecccccccceEEEEEEecCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCC--CcccceeeEEEeCC--eEEEEE
Q 041447           32 LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHH--VNVVQLLGFYSEGS--KRALVY  104 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~--~~~lv~  104 (148)
                      ....+....|.....|....+ ++.++++ ......   ......+|..++..+.-  .-+...++.+.+..  ..+.+|
T Consensus        27 ~~~v~~~~~G~sn~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~  104 (321)
T COG3173          27 LLIVEEISGGWSNDTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVM  104 (321)
T ss_pred             CceeeeccCCcccceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEE
Confidence            344445433433444444333 7778888 332111   22335567777776642  33444455555443  679999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHH-HHHHHHhhhhc
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVAL-GTARGIEYLHN  147 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~-qi~~~l~~lH~  147 (148)
                      +|++|..+.+-..       ..+..  ..++. .+...|.-||+
T Consensus       105 ~~veGe~~~~~~~-------~~~~~--~~~~~~~l~~~La~LH~  139 (321)
T COG3173         105 EWVEGEVVWSALP-------PESLG--RQFALDALADFLAELHS  139 (321)
T ss_pred             EEecceeccCcCC-------cccch--HHHHHHHHHHHHHHHhC
Confidence            9999975544331       11111  23334 78888888885

>PRK05231 homoserine kinase; Provisional

Probab=90.01  E-value=5.4  Score=28.40  Aligned_cols=73  Identities=11%  Similarity=0.025  Sum_probs=40.6

Q ss_pred             cccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC--CCcccceeeE------EEeCCeEEEEEecc
Q 041447           36 WSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIH--HVNVVQLLGF------YSEGSKRALVYEYM  107 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~------~~~~~~~~lv~e~~  107 (148)
                      +.++.|....+|.....+| .+++|+..  .........+...+..+.  .-.+++++..      ....+..+++++|+
T Consensus        28 ~~l~~G~~n~~y~v~t~~g-~~vLK~~~--~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~l  104 (319)
T PRK05231         28 KGIAEGIENSNFFLTTTQG-EYVLTLFE--RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTFL  104 (319)
T ss_pred             chhccccccceEEEEeCCC-cEEEEEec--cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEec
Confidence            4455666678888775544 67888875  223333334444444432  1123333321      12355678999999


Q ss_pred             CCCC
Q 041447          108 PNGS  111 (148)
Q Consensus       108 ~~g~  111 (148)
                      +|..
T Consensus       105 ~G~~  108 (319)
T PRK05231        105 EGKW  108 (319)
T ss_pred             CCCC
Confidence            8854

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=89.45  E-value=4.8  Score=29.73  Aligned_cols=78  Identities=14%  Similarity=0.038  Sum_probs=48.8

Q ss_pred             ccccccceEEEEEEecCC-CEEEEEEccC--------CCcCHHHHHHHHHHHhcCC--CC-cccceeeEEEeCCeEEEEE
Q 041447           37 SSGKDGFGSVYKGQLHTG-GLIAVKMLEN--------SNFSAVEFINEVSTIGRIH--HV-NVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        37 ~lg~g~~~~v~~~~~~~~-~~~avk~~~~--------~~~~~~~~~~e~~~l~~l~--~~-~i~~~~~~~~~~~~~~lv~  104 (148)
                      .+|.|....||++...++ +.++||.=.+        ......+...|...|....  .| .+++++.  .++....++|
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--EccccceehH
Confidence            468899999999986533 5788886321        1233445667777776653  33 5555543  4455567999


Q ss_pred             eccCCC-Chhhcc
Q 041447          105 EYMPNG-SLDRHI  116 (148)
Q Consensus       105 e~~~~g-~L~~~l  116 (148)
                      |+++.. .+...+
T Consensus        80 EdL~~~~ilR~~L   92 (370)
T TIGR01767        80 EDLSHHKIARKGL   92 (370)
T ss_pred             hhCccchHHHHHH
Confidence            998653 343444

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=88.85  E-value=0.98  Score=30.42  Aligned_cols=64  Identities=22%  Similarity=0.367  Sum_probs=46.1

Q ss_pred             cCceeecccccccc-eEEEEEEecCCCEEEEEEccC---CCc-------------------CHHHHHHHHHHHhcC---C
Q 041447           30 SGLDLTWSSGKDGF-GSVYKGQLHTGGLIAVKMLEN---SNF-------------------SAVEFINEVSTIGRI---H   83 (148)
Q Consensus        30 ~~~~~~~~lg~g~~-~~v~~~~~~~~~~~avk~~~~---~~~-------------------~~~~~~~e~~~l~~l---~   83 (148)
                      +++++.+.||.|.- |.||++... |..+|+|.+..   ...                   ....|..|.++...+   .
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            68899999999999 999999986 77999999322   000                   011256777776665   3


Q ss_pred             CCcc--cceeeEE
Q 041447           84 HVNV--VQLLGFY   94 (148)
Q Consensus        84 ~~~i--~~~~~~~   94 (148)
                      +.++  ++++|+.
T Consensus       116 ~e~~~Avkc~Gyl  128 (207)
T PF13095_consen  116 REGLWAVKCHGYL  128 (207)
T ss_pred             ccCceEEEeeEEE
Confidence            5566  8888886

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=87.19  E-value=0.77  Score=38.66  Aligned_cols=73  Identities=19%  Similarity=0.160  Sum_probs=54.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCe----EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           72 FINEVSTIGRIHHVNVVQLLGFYSEGSK----RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        72 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ..-|...+..+.|+|+..++.+......    ..+..++|..-++...+    +.....+......+..+...|++|+|+
T Consensus       229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~----q~v~~i~~~~~r~~~~~~~~GL~~~h~  304 (1351)
T KOG1035|consen  229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLL----QSVGSIPLETLRILHQKLLEGLAYLHS  304 (1351)
T ss_pred             HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHH----hhccccCHHHHHHHHHHHhhhHHHHHH
Confidence            3456667888899999999888654321    22444667766666665    556778899999999999999999997


Q ss_pred             C
Q 041447          148 G  148 (148)
Q Consensus       148 ~  148 (148)
                      +
T Consensus       305 ~  305 (1351)
T KOG1035|consen  305 L  305 (1351)
T ss_pred             h
Confidence            4

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=86.89  E-value=7.7  Score=27.30  Aligned_cols=102  Identities=10%  Similarity=-0.063  Sum_probs=53.2

Q ss_pred             cccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcc--cceeeEEEeCCeEEEEEeccCCCChhhcc
Q 041447           40 KDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVNV--VQLLGFYSEGSKRALVYEYMPNGSLDRHI  116 (148)
Q Consensus        40 ~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i--~~~~~~~~~~~~~~lv~e~~~~g~L~~~l  116 (148)
                      +|.-..|+.....+|..+++|.-. .........+|..++..+. +-.+  +++.  +.  +.-.++++++.|..+...-
T Consensus        21 ~g~~~~v~~i~~~~g~~~VlR~p~-~~~~~~~l~rE~~vL~~L~~~l~vpvP~~~--~~--~~~~~~y~~i~G~p~~~~~   95 (276)
T cd05152          21 SGLDFQVVFAKDTDGVPWVLRIPR-RPDVSERAAAEKRVLALVRKHLPVQVPDWR--VH--TPELIAYPKLPGVPAATID   95 (276)
T ss_pred             CcceeEEEEEEcCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHHhcCCCCCCcee--ee--cCceEEEeccCCCcccccC
Confidence            333344555444457788888653 2223445788888888775 2112  2221  11  1235678888876553211


Q ss_pred             ccc--CCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          117 FPN--EGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       117 ~~~--~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ...  ..... .+......++.+++..|.-||+
T Consensus        96 ~~~~~~~~~~-~~~~~~~~la~~la~~La~LH~  127 (276)
T cd05152          96 PEIGEYVWNF-DHKNPPEVFIESLAKALAELHS  127 (276)
T ss_pred             cccccceecc-cCCCcCHHHHHHHHHHHHHHhC
Confidence            000  00000 0012234578889999999985

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=84.80  E-value=8.1  Score=27.02  Aligned_cols=76  Identities=17%  Similarity=0.246  Sum_probs=47.1

Q ss_pred             ecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcC---CCCcccceeeEEEeCCeEEEEEeccCCCC
Q 041447           35 TWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRI---HHVNVVQLLGFYSEGSKRALVYEYMPNGS  111 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~~~~~~lv~e~~~~g~  111 (148)
                      .+.+.-|..-..|..... ..++=+|.-...  ....+..|+.-|..+   +.-.+++++.+-...++.|+|+||++.|.
T Consensus        21 r~~v~gG~inea~~v~dg-~~~~FvK~n~~~--~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~   97 (286)
T COG3001          21 REEVSGGDINEAWRLRDG-TDPFFVKCNQRE--QLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGP   97 (286)
T ss_pred             ccccCCccccceeEeecC-CcceEEEecchh--hHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCC
Confidence            444555555555555443 345556644322  223455666555544   44678888888888999999999998765


Q ss_pred             hh
Q 041447          112 LD  113 (148)
Q Consensus       112 L~  113 (148)
                      +.
T Consensus        98 ~d   99 (286)
T COG3001          98 LD   99 (286)
T ss_pred             CC
Confidence            53

>PRK12396 5-methylribose kinase; Reviewed

Probab=83.27  E-value=5.9  Score=29.69  Aligned_cols=80  Identities=13%  Similarity=0.032  Sum_probs=51.7

Q ss_pred             ecccccccceEEEEEEec-CCCEEEEEEccC-------CCcCHHHHHHHHHHHhcCC--CC-cccceeeEEEeCCeEEEE
Q 041447           35 TWSSGKDGFGSVYKGQLH-TGGLIAVKMLEN-------SNFSAVEFINEVSTIGRIH--HV-NVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~-------~~~~~~~~~~e~~~l~~l~--~~-~i~~~~~~~~~~~~~~lv  103 (148)
                      .+.||.|....||++... .++.++||.=.+       ......+...|.+.|+...  .| .+++++.  .++....+|
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~--~D~e~~~~v  111 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL--FDSVMNCCV  111 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE--ECcHHhhHH
Confidence            457799999999999864 356788885321       2334556677777777653  34 5666553  445667799


Q ss_pred             EeccCCC-Chhhcc
Q 041447          104 YEYMPNG-SLDRHI  116 (148)
Q Consensus       104 ~e~~~~g-~L~~~l  116 (148)
                      ||+++.. .|.+.+
T Consensus       112 MEdL~~~~ilR~~L  125 (409)
T PRK12396        112 MEDLSDHTILRTAL  125 (409)
T ss_pred             HHhCcccHHHHHHH
Confidence            9999653 344444

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=83.12  E-value=0.17  Score=41.73  Aligned_cols=115  Identities=17%  Similarity=0.161  Sum_probs=70.4

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      .+++.+++.+-.|.++.++.+.. ..|...+.+.......    ..+...++-..+....+|.++.....+......+++
T Consensus       803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~  882 (1205)
T KOG0606|consen  803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV  882 (1205)
T ss_pred             CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence            34677778888899998888763 3343333333322111    111111222222223456666665555556778999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +++..+++|...+    ...+..+..-+..+...+..+.++||.
T Consensus       883 ~~~~~~~~~~Skl----~~~~~~saepaRs~i~~~vqs~e~L~s  922 (1205)
T KOG0606|consen  883 GHYLNGGDLPSKL----HNSGCLSAEPARSPILERVQSLESLHS  922 (1205)
T ss_pred             hHHhccCCchhhh----hcCCCcccccccchhHHHHhhhhcccc
Confidence            9999999998877    333445555666777788889999986

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=82.82  E-value=0.46  Score=36.14  Aligned_cols=46  Identities=13%  Similarity=0.154  Sum_probs=37.2

Q ss_pred             CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhh
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEY  144 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~  144 (148)
                      .++||.|++|...+|.+|+.++. .....+......++.|++.|++|
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~-~~e~~s~s~~~~~~~q~~~~~~y  374 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRR-TGEERSLSLMLDIFKQIAPAVEY  374 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCC-cccccchhHHHHHHHhhccchhh
Confidence            35889999999999999996543 33445778889999999999875

>PLN02236 choline kinase

Probab=81.89  E-value=17  Score=26.54  Aligned_cols=96  Identities=15%  Similarity=0.116  Sum_probs=51.2

Q ss_pred             cccccccceEEEEEEec-----CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCC-cccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQLH-----TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHV-NVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~-----~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      ..+..|-...+|+....     .+..+++|+.......--+..+|..++..+..- --+++++.+. .+   .+++|+++
T Consensus        42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~-~g---~v~efi~g  117 (344)
T PLN02236         42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFP-NG---RVEEFIHA  117 (344)
T ss_pred             EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEEC-Cc---eEEEeeCC
Confidence            44545666788988642     235788887754322211235677777666422 2234444432 22   57888876


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      .++...-         +..   ..+..+++..|+-+|+
T Consensus       118 ~~l~~~~---------l~~---~~~~~~ia~~L~~lH~  143 (344)
T PLN02236        118 RTLSAAD---------LRD---PEISALIAAKLREFHS  143 (344)
T ss_pred             CCCCHHH---------cCC---hHHHHHHHHHHHHHhC
Confidence            5443211         111   1245667777777775

>PTZ00384 choline kinase; Provisional

Probab=80.05  E-value=15  Score=27.30  Aligned_cols=96  Identities=13%  Similarity=0.139  Sum_probs=50.1

Q ss_pred             cccccccceEEEEEEecCC--C-----EEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEEecc
Q 041447           36 WSSGKDGFGSVYKGQLHTG--G-----LIAVKMLENSNFSAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~~~--~-----~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      +.+..|-...+|++....+  .     .|+++........--+-.+|..++..+. +..-+++++.+.    ..++.||+
T Consensus        56 ~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~----~g~l~efI  131 (383)
T PTZ00384         56 KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFG----DFTIQEWV  131 (383)
T ss_pred             EEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCCCeEEEecC----CEEEEEEe
Confidence            4454566678898874322  1     2444432111111112346777777775 334445555542    25889999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +|.+|..--         +.   -..+...|+..|+-+|+
T Consensus       132 eGr~l~~~d---------l~---~p~~~~~IA~~La~lH~  159 (383)
T PTZ00384        132 EGNTMGIDS---------LQ---NLSVLTGIASSLAKFHK  159 (383)
T ss_pred             ccccCChhH---------hc---CHHHHHHHHHHHHHHhc
Confidence            885543211         00   12345667777777775

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	148
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-17
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		4e-17
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		7e-14
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		7e-14
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-13
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-13
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-13
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		3e-12
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-11
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-11
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-11
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		9e-11
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		9e-11
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		7e-10
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		1e-09
4h58_A	275	Braf In Complex With Compound 3 Length = 275		1e-09
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		1e-09
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		1e-09
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		1e-09
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		1e-09
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		1e-09
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		1e-09
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		1e-09
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		2e-09
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		4e-09
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		2e-08
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		2e-08
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		2e-08
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		5e-08
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		5e-08
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		1e-07
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		1e-07
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		1e-07
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-07
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		3e-07
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		3e-07
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		3e-07
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		3e-07
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		4e-07
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		4e-07
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		4e-07
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		4e-07
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		4e-07
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		4e-07
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		5e-07
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		5e-07
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		5e-07
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		5e-07
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		5e-07
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		6e-07
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		6e-07
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		6e-07
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		6e-07
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		6e-07
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		6e-07
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		7e-07
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		7e-07
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		9e-07
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		1e-06
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		1e-06
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		1e-06
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-06
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		1e-06
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-06
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-06
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-06
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		1e-06
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		1e-06
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		1e-06
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-06
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		1e-06
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		1e-06
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-06
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		3e-06
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		3e-06
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		3e-06
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		3e-06
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		3e-06
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		4e-06
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		4e-06
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		4e-06
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		5e-06
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		5e-06
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-06
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		6e-06
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		6e-06
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-06
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		6e-06
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-06
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-06
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		8e-06
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		9e-06
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-05
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		1e-05
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-05
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-05
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-05
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-05
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		2e-05
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		2e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		2e-05
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-05
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		2e-05
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-05
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		2e-05
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-05
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		2e-05
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-05
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-05
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		2e-05
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-05
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		2e-05
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		2e-05
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-05
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-05
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		2e-05
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-05
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		2e-05
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		2e-05
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		3e-05
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		3e-05
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		3e-05
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-05
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		3e-05
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		4e-05
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-05
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		4e-05
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		4e-05
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		4e-05
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		4e-05
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		4e-05
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		4e-05
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		4e-05
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		4e-05
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		5e-05
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		5e-05
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		5e-05
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		5e-05
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		5e-05
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-05
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		5e-05
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		5e-05
2pl0_A	289	Lck Bound To Imatinib Length = 289		5e-05
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		6e-05
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		7e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		8e-05
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		8e-05
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		9e-05
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		1e-04
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		1e-04
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-04
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		1e-04
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		2e-04
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		2e-04
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-04
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		2e-04
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-04
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-04
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		2e-04
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		2e-04
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		3e-04
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-04
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		3e-04
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		3e-04
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		3e-04
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		3e-04
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		4e-04
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		4e-04
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		4e-04
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		4e-04
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		4e-04
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		5e-04
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		5e-04
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		5e-04
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		7e-04

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           G+ GFG VYKG+L  G L+AVK L  E +    ++F  EV  I    H N+++L GF   
Sbjct: 39  GRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT 98
Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            ++R LVY YM NGS+   +           W K   +ALG+ARG+ YLH+
Sbjct: 99  PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD 149

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           G+ GFG VYKG+L  G L+AVK L  E      ++F  EV  I    H N+++L GF   
Sbjct: 47  GRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMT 106
Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            ++R LVY YM NGS+   +           W K   +ALG+ARG+ YLH+
Sbjct: 107 PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD 157

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 43  FGSVYKGQLHTGGLIAVKM-LENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           FG VYKG L  G  +A+K     S+    EF  E+ T+    H ++V L+GF  E ++  
Sbjct: 52  FGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI 111
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           L+Y+YM NG+L RH++ ++    S SWE+  E+ +G ARG+ YLH 
Sbjct: 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT 157

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 43  FGSVYKGQLHTGGLIAVKM-LENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           FG VYKG L  G  +A+K     S+    EF  E+ T+    H ++V L+GF  E ++  
Sbjct: 52  FGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI 111
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           L+Y+YM NG+L RH++ ++    S SWE+  E+ +G ARG+ YLH 
Sbjct: 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT 157

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQLLGFY 94
           G+ GFG VYKG ++   +   K+    + +  E    F  E+  + +  H N+V+LLGF 
Sbjct: 34  GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS 93
Query: 95  SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
           S+G    LVY YMPNGSL   +   +G     SW    ++A G A GI +LH
Sbjct: 94  SDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSWHMRCKIAQGAANGINFLH 144

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQLLGFY 94
           G+ GFG VYKG ++   +   K+    + +  E    F  E+  + +  H N+V+LLGF 
Sbjct: 40  GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS 99
Query: 95  SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
           S+G    LVY YMPNGSL   +   +G     SW    ++A G A GI +LH
Sbjct: 100 SDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSWHMRCKIAQGAANGINFLH 150

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQLLGFY 94
           G+ GFG VYKG ++   +   K+    + +  E    F  E+  + +  H N+V+LLGF 
Sbjct: 40  GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS 99
Query: 95  SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
           S+G    LVY YMPNGSL   +   +G     SW    ++A G A GI +LH
Sbjct: 100 SDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSWHMRCKIAQGAANGINFLH 150

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQLLGFY 94
           G+ GFG VYKG ++   +   K+    + +  E    F  E+    +  H N+V+LLGF 
Sbjct: 31  GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFS 90
Query: 95  SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
           S+G    LVY Y PNGSL   +   +G     SW    ++A G A GI +LH
Sbjct: 91  SDGDDLCLVYVYXPNGSLLDRLSCLDGT-PPLSWHXRCKIAQGAANGINFLH 141

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+VYKG+ H  G +AVKML  +  +  +   F NEV  + +  HVN++  +G YS
Sbjct: 33  GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 89
Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              + A+V ++    SL  H+  +E +   F  +KL ++A  TARG++YLH
Sbjct: 90  TAPQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLH 137

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+VYKG+ H  G +AVKML  +  +  +   F NEV  + +  HVN++  +G YS
Sbjct: 21  GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 77
Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              + A+V ++    SL  H+  +E +   F  +KL ++A  TARG++YLH
Sbjct: 78  TKPQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLH 125

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+VYKG+ H  G +AVKML  +  +  +   F NEV  + +  HVN++  +G YS
Sbjct: 33  GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 89
Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              + A+V ++    SL  H+  +E +   F  +KL ++A  TARG++YLH
Sbjct: 90  TKPQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLH 137

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 17  DNPSYEDL--RKLLD-SGLDLTWSS-------GKDGFGSVYKGQLHTGGLIAVKMLENSN 66
           D P+ E+L  +  +D   +D+ W         G   FG+V++ + H G  +AVK+L   +
Sbjct: 14  DIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQD 72
Query: 67  FSAV---EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRG 123
           F A    EF+ EV+ + R+ H N+V  +G  ++    ++V EY+  GSL R +  +  R 
Sbjct: 73  FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE 132
Query: 124 KSFSWEKLHEVALGTARGIEYLHN 147
           +     +L  +A   A+G+ YLHN
Sbjct: 133 QLDERRRL-SMAYDVAKGMNYLHN 155

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 17  DNPSYEDL--RKLLD-SGLDLTWSS-------GKDGFGSVYKGQLHTGGLIAVKMLENSN 66
           D P+ E+L  +  +D   +D+ W         G   FG+V++ + H G  +AVK+L   +
Sbjct: 14  DIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQD 72
Query: 67  FSAV---EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRG 123
           F A    EF+ EV+ + R+ H N+V  +G  ++    ++V EY+  GSL R +  +  R 
Sbjct: 73  FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE 132
Query: 124 KSFSWEKLHEVALGTARGIEYLHN 147
           +     +L  +A   A+G+ YLHN
Sbjct: 133 QLDERRRL-SMAYDVAKGMNYLHN 155

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+VYKG+ H  G +AVKML  +  +  +   F NEV  + +  HVN++  +G YS
Sbjct: 17  GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 73
Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              + A+V ++    SL  H+   E +   F   KL ++A  TA+G++YLH
Sbjct: 74  TAPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 121

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+VYKG+ H  G +AVKML  +  +  +   F NEV  + +  HVN++  +G YS
Sbjct: 22  GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 78
Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              + A+V ++    SL  H+   E +   F   KL ++A  TA+G++YLH
Sbjct: 79  TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 126

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+VYKG+ H  G +AVKML  +  +  +   F NEV  + +  HVN++  +G YS
Sbjct: 17  GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 73
Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              + A+V ++    SL  H+   E +   F   KL ++A  TA+G++YLH
Sbjct: 74  TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 121

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+VYKG+ H  G +AVKML  +  +  +   F NEV  + +  HVN++  +G YS
Sbjct: 22  GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 78
Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              + A+V ++    SL  H+   E +   F   KL ++A  TA+G++YLH
Sbjct: 79  TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 126

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+VYKG+ H  G +AVKML  +  +  +   F NEV  + +  HVN++  +G YS
Sbjct: 17  GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 73
Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              + A+V ++    SL  H+   E +   F   KL ++A  TA+G++YLH
Sbjct: 74  TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 121

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+VYKG+ H  G +AVKML  +  +  +   F NEV  + +  HVN++  +G YS
Sbjct: 44  GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 100
Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              + A+V ++    SL  H+   E +   F   KL ++A  TA+G++YLH
Sbjct: 101 TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 148

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+VYKG+ H  G +AVKML  +  +  +   F NEV  + +  HVN++  +G YS
Sbjct: 37  GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 93
Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              + A+V ++    SL  H+   E +   F   KL ++A  TA+G++YLH
Sbjct: 94  TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 141

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+VYKG+ H  G +AVKML  +  +  +   F NEV  + +  HVN++  +G YS
Sbjct: 19  GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 75
Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              + A+V ++    SL  H+   E +   F   KL ++A  TA+G++YLH
Sbjct: 76  TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 123

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+VYKG+ H  G +AVKML  +  +  +   F NEV  + +  HVN++  +G YS
Sbjct: 45  GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 101
Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              + A+V ++    SL  H+   E +   F   KL ++A  TA+G++YLH
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 149

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+VYKG+ H  G +AVKML  +  +  +   F NEV  + +  HVN++  +G YS
Sbjct: 45  GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 101
Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              + A+V ++    SL  H+   E +   F   KL ++A  TA+G++YLH
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 149

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 67/111 (60%), Gaps = 9/111 (8%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFI---NEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+VYKG+ H  G +AVK+L+  + +  +F    NEV+ + +  HVN++  +G+ +
Sbjct: 45  GSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
           + +  A+V ++    SL +H+   E + + F   +L ++A  TA+G++YLH
Sbjct: 103 KDN-LAIVTQWCEGSSLYKHLHVQETKFQMF---QLIDIARQTAQGMDYLH 149

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 39  GKDGFGSVYKGQLHTGG-----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLL 91
           G   FG VYKG L T        +A+K L+   +    V+F+ E   +G+  H N+++L 
Sbjct: 53  GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLE 112
Query: 92  GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           G  S+     ++ EYM NG+LD+ +   +G    FS  +L  +  G A G++YL N
Sbjct: 113 GVISKYKPMMIITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAGMKYLAN 165

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 43  FGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           FG V  G+L   G     +A+K L+   ++    +F++E S +G+  H N++ L G  ++
Sbjct: 21  FGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 80
Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                ++ EYM NGSLD  +  N+GR   F+  +L  +  G   G++YL +
Sbjct: 81  CKPVMIITEYMENGSLDAFLRKNDGR---FTVIQLVGMLRGIGSGMKYLSD 128

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 43  FGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           FG V  G+L   G     +A+K L+   ++    +F++E S +G+  H N++ L G  ++
Sbjct: 42  FGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 101
Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                ++ EYM NGSLD  +  N+GR   F+  +L  +  G   G++YL +
Sbjct: 102 CKPVMIITEYMENGSLDAFLRKNDGR---FTVIQLVGMLRGIGSGMKYLSD 149

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 43  FGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           FG V  G+L   G     +A+K L+   ++    +F++E S +G+  H N++ L G  ++
Sbjct: 27  FGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 86
Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                ++ EYM NGSLD  +  N+GR   F+  +L  +  G   G++YL +
Sbjct: 87  CKPVMIITEYMENGSLDAFLRKNDGR---FTVIQLVGMLRGIGSGMKYLSD 134

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 39  GKDGFGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V  G L   G     +A+K L++  +     +F++E S +G+  H NV+ L G
Sbjct: 16  GAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEG 75
Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             ++ +   ++ E+M NGSLD  +  N+G+   F+  +L  +  G A G++YL +
Sbjct: 76  VVTKSTPVMIITEFMENGSLDSFLRQNDGQ---FTVIQLVGMLRGIAAGMKYLAD 127

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 39  GKDGFGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V  G L   G     +A+K L++  +     +F++E S +G+  H NV+ L G
Sbjct: 42  GAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEG 101
Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             ++ +   ++ E+M NGSLD  +  N+G+   F+  +L  +  G A G++YL +
Sbjct: 102 VVTKSTPVMIITEFMENGSLDSFLRQNDGQ---FTVIQLVGMLRGIAAGMKYLAD 153

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 16  VDNPSYED--------LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG----LIAVKMLE 63
           +D  +YED         ++L  S + +    G   FG V  G+L   G     +A+K L+
Sbjct: 21  IDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLK 80
Query: 64  --NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEG 121
              +     +F+ E S +G+  H NVV L G  + G    +V E+M NG+LD  +  ++G
Sbjct: 81  VGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG 140
Query: 122 RGKSFSWEKLHEVALGTARGIEYLHN 147
           +   F+  +L  +  G A G+ YL +
Sbjct: 141 Q---FTVIQLVGMLRGIAAGMRYLAD 163

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 39  GKDGFGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V +G+L   G     +A+K L+   +     EF++E S +G+  H N+++L G
Sbjct: 25  GAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEG 84
Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
             +      ++ E+M NG+LD  +  N+G+   F+  +L  +  G A G+ YL
Sbjct: 85  VVTNSMPVMILTEFMENGALDSFLRLNDGQ---FTVIQLVGMLRGIASGMRYL 134

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 39  GKDGFGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V +G+L   G     +A+K L+   +     EF++E S +G+  H N+++L G
Sbjct: 23  GAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEG 82
Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
             +      ++ E+M NG+LD  +  N+G+   F+  +L  +  G A G+ YL
Sbjct: 83  VVTNSMPVMILTEFMENGALDSFLRLNDGQ---FTVIQLVGMLRGIASGMRYL 132

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 30  SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQ 89
           S L      G   FG V+ G       +A+K ++  + S  +FI E   + ++ H  +VQ
Sbjct: 27  SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQ 86
Query: 90  LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
           L G   E +   LV+E+M +G L  ++    G    F+ E L  + L    G+ YL   
Sbjct: 87  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEA 142

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 30  SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQ 89
           S L      G   FG V+ G       +A+K +     S  +FI E   + ++ H  +VQ
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 90  LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
           L G   E +   LV+E+M +G L  ++    G    F+ E L  + L    G+ YL   
Sbjct: 65  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEA 120

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 16  VDNPSY---EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHT------GGLIAVKMLENSN 66
           ++NP Y     +  +    + L W  G+  FG V+  + H         L+AVK L+ ++
Sbjct: 24  IENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS 83
Query: 67  FSAVE-FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHI 116
            SA + F  E   +  + H ++V+  G  +EG    +V+EYM +G L+R +
Sbjct: 84  ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 134

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 30  SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQ 89
           S L      G   FG V+ G       +A+K +     S  +FI E   + ++ H  +VQ
Sbjct: 7   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 90  LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
           L G   E +   LV+E+M +G L  ++    G    F+ E L  + L    G+ YL   
Sbjct: 67  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEA 122

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 30  SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQ 89
           S L      G   FG V+ G       +A+K +     S  +FI E   + ++ H  +VQ
Sbjct: 7   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 90  LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
           L G   E +   LV+E+M +G L  ++    G    F+ E L  + L    G+ YL   
Sbjct: 67  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEA 122

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 30  SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQ 89
           S L      G   FG V+ G       +A+K +     S  +FI E   + ++ H  +VQ
Sbjct: 10  SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 90  LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
           L G   E +   LV+E+M +G L  ++    G    F+ E L  + L    G+ YL   
Sbjct: 70  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEA 125

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 39  GKDGFGSVYKGQLHTGG----LIAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V  G+L   G     +A+K L+   +     +F+ E S +G+  H N++ L G
Sbjct: 31  GAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEG 90
Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             ++     +V EYM NGSLD  +  N+G+   F+  +L  +  G + G++YL +
Sbjct: 91  VVTKSKPVMIVTEYMENGSLDTFLKKNDGQ---FTVIQLVGMLRGISAGMKYLSD 142

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 15/139 (10%)
Query: 18  NPSYEDLRKLLDSGL--------DLTWSSGKDGFGSVYKG-QLHTGGLIAVKMLE-NSNF 67
           NP    L+KL +  L        D+    G+  +GSVYK     TG ++A+K +   S+ 
Sbjct: 9   NPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL 68
Query: 68  SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFS 127
              E I E+S + +    +VV+  G Y + +   +V EY   GS+   I     R K+ +
Sbjct: 69  Q--EIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII---RLRNKTLT 123
Query: 128 WEKLHEVALGTARGIEYLH 146
            +++  +   T +G+EYLH
Sbjct: 124 EDEIATILQSTLKGLEYLH 142

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 34  LTWSSGKDGFGSVYKGQLHT------GGLIAVKMLENSNFSAVE-FINEVSTIGRIHHVN 86
           L W  G+  FG V+  + H         L+AVK L+ ++ SA + F  E   +  + H +
Sbjct: 22  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 87  VVQLLGFYSEGSKRALVYEYMPNGSLDRHI 116
           +V+  G  +EG    +V+EYM +G L+R +
Sbjct: 82  IVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 111

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 34  LTWSSGKDGFGSVYKGQLHT------GGLIAVKMLENSNFSAVE-FINEVSTIGRIHHVN 86
           L W  G+  FG V+  + H         L+AVK L+ ++ SA + F  E   +  + H +
Sbjct: 16  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 87  VVQLLGFYSEGSKRALVYEYMPNGSLDRHI 116
           +V+  G  +EG    +V+EYM +G L+R +
Sbjct: 76  IVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 105

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 33  DLTWSS--GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQL 90
           DLT+    G   FG V  G+      +A+KM++  + S  EFI E   +  + H  +VQL
Sbjct: 5   DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 91  LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            G  ++     ++ EYM NG L  ++   E R + F  ++L E+       +EYL +
Sbjct: 65  YGVCTKQRPIFIITEYMANGCLLNYL--REMRHR-FQTQQLLEMCKDVCEAMEYLES 118

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 32  LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
           L L  + GK  FG V  G  + G  +AVK ++N + +A  F+ E S + ++ H N+VQLL
Sbjct: 8   LKLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLL 65
Query: 92  G-FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS-FSWEKLHEVALGTARGIEYLH 146
           G    E     +V EYM  GSL  ++     RG+S    + L + +L     +EYL 
Sbjct: 66  GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE 119

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G   FG V  G+      +A+KM++  + S  EFI E   +  + H  +VQL G  ++  
Sbjct: 18  GTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR 77
Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              ++ EYM NG L  ++   E R + F  ++L E+       +EYL +
Sbjct: 78  PIFIITEYMANGCLLNYL--REMRHR-FQTQQLLEMCKDVCEAMEYLES 123

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 32  LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
           L L  + GK  FG V  G  + G  +AVK ++N + +A  F+ E S + ++ H N+VQLL
Sbjct: 14  LKLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLL 71
Query: 92  G-FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS-FSWEKLHEVALGTARGIEYLH 146
           G    E     +V EYM  GSL  ++     RG+S    + L + +L     +EYL 
Sbjct: 72  GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE 125

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G   FG V  G+      +A+KM++  + S  EFI E   +  + H  +VQL G  ++  
Sbjct: 17  GTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR 76
Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              ++ EYM NG L  ++   E R + F  ++L E+       +EYL +
Sbjct: 77  PIFIITEYMANGCLLNYL--REMRHR-FQTQQLLEMCKDVCEAMEYLES 122

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 33  DLTWSS--GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQL 90
           DLT+    G   FG V  G+      +A+KM++  + S  EFI E   +  + H  +VQL
Sbjct: 10  DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 91  LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            G  ++     ++ EYM NG L  ++   E R + F  ++L E+       +EYL +
Sbjct: 70  YGVCTKQRPIFIITEYMANGCLLNYL--REMRHR-FQTQQLLEMCKDVCEAMEYLES 123

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 32  LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
           L L  + GK  FG V  G  + G  +AVK ++N + +A  F+ E S + ++ H N+VQLL
Sbjct: 23  LKLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLL 80
Query: 92  G-FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS-FSWEKLHEVALGTARGIEYLH 146
           G    E     +V EYM  GSL  ++     RG+S    + L + +L     +EYL 
Sbjct: 81  GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE 134

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G   FG V  G+      +A+KM++  + S  EFI E   +  + H  +VQL G  ++  
Sbjct: 33  GTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR 92
Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              ++ EYM NG L  ++   E R + F  ++L E+       +EYL +
Sbjct: 93  PIFIITEYMANGCLLNYL--REMRHR-FQTQQLLEMCKDVCEAMEYLES 138

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 33  DLTWSS--GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQL 90
           DLT+    G   FG V  G+      +A+KM++  + S  EFI E   +  + H  +VQL
Sbjct: 16  DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 75
Query: 91  LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            G  ++     ++ EYM NG L  ++   E R + F  ++L E+       +EYL +
Sbjct: 76  YGVCTKQRPIFIITEYMANGCLLNYL--REMRHR-FQTQQLLEMCKDVCEAMEYLES 129

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G   FG V  G+      +A+KM++  + S  EFI E   +  + H  +VQL G  ++  
Sbjct: 33  GTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR 92
Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              ++ EYM NG L  ++   E R + F  ++L E+       +EYL +
Sbjct: 93  PIFIITEYMANGCLLNYL--REMRHR-FQTQQLLEMCKDVCEAMEYLES 138

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
           S  DL+++    + L    G   FG VY+GQ+       +   +AVK L    S    ++
Sbjct: 35  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
           F+ E   I +++H N+V+ +G   +   R ++ E M  G L    R   P   +  S + 
Sbjct: 95  FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 129 EKLHEVALGTARGIEYLH 146
             L  VA   A G +YL 
Sbjct: 155 LDLLHVARDIACGCQYLE 172

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
           S  DL+++    + L    G   FG VY+GQ+       +   +AVK L    S    ++
Sbjct: 21  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
           F+ E   I +++H N+V+ +G   +   R ++ E M  G L    R   P   +  S + 
Sbjct: 81  FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 129 EKLHEVALGTARGIEYLH 146
             L  VA   A G +YL 
Sbjct: 141 LDLLHVARDIACGCQYLE 158

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 20  SYEDLRKLLDSG--LDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE-FINE 75
            YE +R+ LD     ++    G   FG VYK +   TG L A K++E  +   +E +I E
Sbjct: 7   EYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVE 66
Query: 76  VSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD 113
           +  +    H  +V+LLG Y    K  ++ E+ P G++D
Sbjct: 67  IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVD 104

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 32  LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
           L L  + GK  FG V  G  + G  +AVK ++N + +A  F+ E S + ++ H N+VQLL
Sbjct: 195 LKLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLL 252
Query: 92  G-FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS-FSWEKLHEVALGTARGIEYL 145
           G    E     +V EYM  GSL  ++     RG+S    + L + +L     +EYL
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL 305

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
           S  DL+++    + L    G   FG VY+GQ+       +   +AVK L    S    ++
Sbjct: 20  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
           F+ E   I + +H N+V+ +G   +   R ++ E M  G L    R   P   +  S + 
Sbjct: 80  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 129 EKLHEVALGTARGIEYLH 146
             L  VA   A G +YL 
Sbjct: 140 LDLLHVARDIACGCQYLE 157

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
           S  DL+++    + L    G   FG VY+GQ+       +   +AVK L    S    ++
Sbjct: 20  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
           F+ E   I + +H N+V+ +G   +   R ++ E M  G L    R   P   +  S + 
Sbjct: 80  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 129 EKLHEVALGTARGIEYLH 146
             L  VA   A G +YL 
Sbjct: 140 LDLLHVARDIACGCQYLE 157

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
           S  DL+++    + L    G   FG VY+GQ+       +   +AVK L    S    ++
Sbjct: 12  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
           F+ E   I + +H N+V+ +G   +   R ++ E M  G L    R   P   +  S + 
Sbjct: 72  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 129 EKLHEVALGTARGIEYLH 146
             L  VA   A G +YL 
Sbjct: 132 LDLLHVARDIACGCQYLE 149

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 22  EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
           +D+ ++    L L    G   FG V+ G  +    +A+K L+    S   F+ E   + +
Sbjct: 1   KDVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKK 60
Query: 82  IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
           + H  +VQL    SE     +V EYM  GSL    F  +G G++     L ++A   A G
Sbjct: 61  LKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLD--FLKDGEGRALKLPNLVDMAAQVAAG 117
Query: 142 IEYLH 146
           + Y+ 
Sbjct: 118 MAYIE 122

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Query: 30  SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQ 89
           S L      G   FG V+ G       +A+K +     S  +FI E   + ++ H  +VQ
Sbjct: 8   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 67
Query: 90  LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
           L G   E +   LV E+M +G L  ++    G    F+ E L  + L    G+ YL   
Sbjct: 68  LYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEA 123

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
           S  DL+++    + L    G   FG VY+GQ+       +   +AVK L    S    ++
Sbjct: 37  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
           F+ E   I + +H N+V+ +G   +   R ++ E M  G L    R   P   +  S + 
Sbjct: 97  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 156
Query: 129 EKLHEVALGTARGIEYLH 146
             L  VA   A G +YL 
Sbjct: 157 LDLLHVARDIACGCQYLE 174

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
           S  DL+++    + L    G   FG VY+GQ+       +   +AVK L    S    ++
Sbjct: 21  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
           F+ E   I + +H N+V+ +G   +   R ++ E M  G L    R   P   +  S + 
Sbjct: 81  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 129 EKLHEVALGTARGIEYLH 146
             L  VA   A G +YL 
Sbjct: 141 LDLLHVARDIACGCQYLE 158

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
           S  DL+++    + L    G   FG VY+GQ+       +   +AVK L    S    ++
Sbjct: 35  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
           F+ E   I + +H N+V+ +G   +   R ++ E M  G L    R   P   +  S + 
Sbjct: 95  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 129 EKLHEVALGTARGIEYLH 146
             L  VA   A G +YL 
Sbjct: 155 LDLLHVARDIACGCQYLE 172

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
           S  DL+++    + L    G   FG VY+GQ+       +   +AVK L    S    ++
Sbjct: 27  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 86
Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
           F+ E   I + +H N+V+ +G   +   R ++ E M  G L    R   P   +  S + 
Sbjct: 87  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 146
Query: 129 EKLHEVALGTARGIEYLH 146
             L  VA   A G +YL 
Sbjct: 147 LDLLHVARDIACGCQYLE 164

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
           S  DL+++    + L    G   FG VY+GQ+       +   +AVK L    S    ++
Sbjct: 21  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
           F+ E   I + +H N+V+ +G   +   R ++ E M  G L    R   P   +  S + 
Sbjct: 81  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 129 EKLHEVALGTARGIEYLH 146
             L  VA   A G +YL 
Sbjct: 141 LDLLHVARDIACGCQYLE 158

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
           S  DL+++    + L    G   FG VY+GQ+       +   +AVK L    S    ++
Sbjct: 38  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
           F+ E   I + +H N+V+ +G   +   R ++ E M  G L    R   P   +  S + 
Sbjct: 98  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 157
Query: 129 EKLHEVALGTARGIEYLH 146
             L  VA   A G +YL 
Sbjct: 158 LDLLHVARDIACGCQYLE 175

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
           S  DL+++    + L    G   FG VY+GQ+       +   +AVK L    S    ++
Sbjct: 61  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
           F+ E   I + +H N+V+ +G   +   R ++ E M  G L    R   P   +  S + 
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 180
Query: 129 EKLHEVALGTARGIEYLH 146
             L  VA   A G +YL 
Sbjct: 181 LDLLHVARDIACGCQYLE 198

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
           S  DL+++    + L    G   FG VY+GQ+       +   +AVK L    S    ++
Sbjct: 47  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 106
Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
           F+ E   I + +H N+V+ +G   +   R ++ E M  G L    R   P   +  S + 
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 166
Query: 129 EKLHEVALGTARGIEYLH 146
             L  VA   A G +YL 
Sbjct: 167 LDLLHVARDIACGCQYLE 184

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
           S  DL+++    + L    G   FG VY+GQ+       +   +AVK L    S    ++
Sbjct: 35  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD 94
Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
           F+ E   I + +H N+V+ +G   +   R ++ E M  G L    R   P   +  S + 
Sbjct: 95  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 129 EKLHEVALGTARGIEYLH 146
             L  VA   A G +YL 
Sbjct: 155 LDLLHVARDIACGCQYLE 172

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 44  GSVYKGQLHTGGL----IAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
           G V  G+L   G     +A+K L+   +     +F++E S +G+  H N+++L G  + G
Sbjct: 63  GEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG 122
Query: 98  SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
               +V EYM NGSLD  +  ++G+   F+  +L  +  G   G+ YL +
Sbjct: 123 RLAMIVTEYMENGSLDTFLRTHDGQ---FTIMQLVGMLRGVGAGMRYLSD 169

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 44  GSVYKGQLHTGGL----IAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
           G V  G+L   G     +A+K L+   +     +F++E S +G+  H N+++L G  + G
Sbjct: 63  GEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG 122
Query: 98  SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
               +V EYM NGSLD  +  ++G+   F+  +L  +  G   G+ YL +
Sbjct: 123 RLAMIVTEYMENGSLDTFLRTHDGQ---FTIMQLVGMLRGVGAGMRYLSD 169

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 45  YGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFY 104
Query: 102 LVYEYMPNGSL 112
           +V EYMP G+L
Sbjct: 105 IVTEYMPYGNL 115

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 12  LNRSVDNPSYED--------LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL----IAV 59
           L   VD  +YED         ++L  + + +    G   FG V  G+L         +A+
Sbjct: 19  LRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 60  KMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIF 117
           K L+   +     +F+ E S +G+  H N+++L G  ++     +V EYM NGSLD  + 
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 118 PNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            ++ +   F+  +L  +  G A G++YL +
Sbjct: 139 KHDAQ---FTVIQLVGMLRGIASGMKYLSD 165

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 12  LNRSVDNPSYED--------LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL----IAV 59
           L   VD  +YED         ++L  + + +    G   FG V  G+L         +A+
Sbjct: 17  LRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 76
Query: 60  KMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIF 117
           K L+   +     +F+ E S +G+  H N+++L G  ++     +V EYM NGSLD  + 
Sbjct: 77  KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 136
Query: 118 PNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            ++ +   F+  +L  +  G A G++YL +
Sbjct: 137 KHDAQ---FTVIQLVGMLRGIASGMKYLSD 163

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 16  VDNPSYED--------LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL----IAVKMLE 63
           VD  +YED         ++L  + + +    G   FG V  G+L         +A+K L+
Sbjct: 23  VDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 64  --NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEG 121
              +     +F+ E S +G+  H N+++L G  ++     +V EYM NGSLD  +  ++ 
Sbjct: 83  VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
Query: 122 RGKSFSWEKLHEVALGTARGIEYLHN 147
           +   F+  +L  +  G A G++YL +
Sbjct: 143 Q---FTVIQLVGMLRGIASGMKYLSD 165

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE-FINEVSTIGRIHHVNVVQLLGFYSE 96
           G   FG VYK +   TG L A K++E  +   +E +I E+  +    H  +V+LLG Y  
Sbjct: 20  GDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH 79
Query: 97  GSKRALVYEYMPNGSLD 113
             K  ++ E+ P G++D
Sbjct: 80  DGKLWIMIEFCPGGAVD 96

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 24  LRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKML-------ENSNFSAV-EFIN 74
           L  L D+ ++     GK GFG V+KG+L     ++A+K L       E        EF  
Sbjct: 13  LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72
Query: 75  EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
           EV  +  ++H N+V+L G      +  +V E++P G L   +     +     W     +
Sbjct: 73  EVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRL 127
Query: 135 ALGTARGIEYLHN 147
            L  A GIEY+ N
Sbjct: 128 MLDIALGIEYMQN 140

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 24  LRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKML-------ENSNFSAV-EFIN 74
           L  L D+ ++     GK GFG V+KG+L     ++A+K L       E        EF  
Sbjct: 13  LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72
Query: 75  EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
           EV  +  ++H N+V+L G      +  +V E++P G L   +     +     W     +
Sbjct: 73  EVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRL 127
Query: 135 ALGTARGIEYLHN 147
            L  A GIEY+ N
Sbjct: 128 MLDIALGIEYMQN 140

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 24  LRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKML-------ENSNFSAV-EFIN 74
           L  L D+ ++     GK GFG V+KG+L     ++A+K L       E        EF  
Sbjct: 13  LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72
Query: 75  EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
           EV  +  ++H N+V+L G      +  +V E++P G L   +     +     W     +
Sbjct: 73  EVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRL 127
Query: 135 ALGTARGIEYLHN 147
            L  A GIEY+ N
Sbjct: 128 MLDIALGIEYMQN 140

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 39  GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V  G+L         +A+K L+   +     +F+ E S +G+  H N+++L G
Sbjct: 25  GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 84
Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             ++     +V EYM NGSLD  +  ++ +   F+  +L  +  G A G++YL +
Sbjct: 85  VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 136

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 39  GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V  G+L         +A+K L+   +     +F+ E S +G+  H N+++L G
Sbjct: 42  GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 101
Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             ++     +V EYM NGSLD  +  ++ +   F+  +L  +  G A G++YL +
Sbjct: 102 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 153

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 39  GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V  G+L         +A+K L+   +     +F+ E S +G+  H N+++L G
Sbjct: 54  GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             ++     +V EYM NGSLD  +  ++ +   F+  +L  +  G A G++YL +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 165

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 39  GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V  G+L         +A+K L+   +     +F+ E S +G+  H N+++L G
Sbjct: 54  GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             ++     +V EYM NGSLD  +  ++ +   F+  +L  +  G A G++YL +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 165

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 39  GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V  G+L         +A+K L+   +     +F+ E S +G+  H N+++L G
Sbjct: 54  GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             ++     +V EYM NGSLD  +  ++ +   F+  +L  +  G A G++YL +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 165

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 39  GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V  G+L         +A+K L+   +     +F+ E S +G+  H N+++L G
Sbjct: 54  GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             ++     +V EYM NGSLD  +  ++ +   F+  +L  +  G A G++YL +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 165

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFINEVSTIGRIH----HVNVVQLLGF 93
           GK  F  VY+ + +HTG  +A+KM++         +  V    +IH    H ++++L  +
Sbjct: 20  GKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY 79
Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           + + +   LV E   NG ++R++   + R K FS  +          G+ YLH+
Sbjct: 80  FEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGMLYLHS 130

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           FG VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 24  FGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 83
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           ++ E+M  G+L  ++   E   +  S   L  +A   +  +EYL  
Sbjct: 84  IITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK 127

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 39  GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V  G+L         +A+K L+   +     +F+ E S +G+  H N+++L G
Sbjct: 54  GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             ++     +V EYM NGSLD  +  ++ +   F+  +L  +  G A G++YL +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 165

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G   FG V  G+      +AVKM++  + S  EF  E  T+ ++ H  +V+  G  S+  
Sbjct: 17  GSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY 76
Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              +V EY+ NG L  ++      GK     +L E+      G+ +L +
Sbjct: 77  PIYIVTEYISNGCLLNYL---RSHGKGLEPSQLLEMCYDVCEGMAFLES 122

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G+  FG V+ G  +    +A+K L+  N S   F+ E   + ++ H  +VQL    SE  
Sbjct: 194 GQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 252
Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
              +V EYM  GSL    F     GK     +L ++A   A G+ Y+
Sbjct: 253 PIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYV 297

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22  EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
           +D  ++    L L    G+  FG V+ G  +    +A+K L+    S   F+ E   + +
Sbjct: 10  KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 82  IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
           I H  +VQL    SE     +V EYM  GSL    F     GK     +L ++A   A G
Sbjct: 70  IRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 142 IEYLHN 147
           + Y+  
Sbjct: 127 MAYVER 132

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G+  FG V+ G  +    +A+K L+    S   F+ E   + ++ H  +VQL    SE  
Sbjct: 17  GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 75
Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              +V EYM  GSL    F     GK     +L ++A   A G+ Y+  
Sbjct: 76  PIXIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 122

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEV 76
           +P+Y D  ++  + + +    G   +G VY+G      L +AVK L+       EF+ E 
Sbjct: 4   DPNY-DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 62
Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
           + +  I H N+VQLLG  +      ++ E+M  G+L
Sbjct: 63  AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 98

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 24  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 83
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           ++ E+M  G+L  ++   E   +  S   L  +A   +  +EYL  
Sbjct: 84  IIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK 127

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 26  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           ++ E+M  G+L  ++   E   +  S   L  +A   +  +EYL  
Sbjct: 86  IIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK 129

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 26  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           ++ E+M  G+L  ++   E   +  S   L  +A   +  +EYL  
Sbjct: 86  IIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK 129

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 26  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           ++ E+M  G+L  ++   E   +  S   L  +A   +  +EYL  
Sbjct: 86  IITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK 129

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 24  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 83
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           ++ E+M  G+L  ++   E   +  S   L  +A   +  +EYL  
Sbjct: 84  IITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK 127

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 31  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 90
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           ++ E+M  G+L  ++   E   +  S   L  +A   +  +EYL  
Sbjct: 91  IITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK 134

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 26  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           ++ E+M  G+L  ++   E   +  S   L  +A   +  +EYL  
Sbjct: 86  IITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK 129

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 27  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 86
Query: 102 LVYEYMPNGSL 112
           ++ E+M  G+L
Sbjct: 87  IIIEFMTYGNL 97

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 31  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 90
Query: 102 LVYEYMPNGSL 112
           ++ E+M  G+L
Sbjct: 91  IIIEFMTYGNL 101

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 27  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 86
Query: 102 LVYEYMPNGSL 112
           ++ E+M  G+L
Sbjct: 87  IITEFMTYGNL 97

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22  EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
           +D  ++    L L    G+  FG V+ G  +    +A+K L+    S   F+ E   + +
Sbjct: 10  KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 82  IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
           + H  +VQL    SE     +V EYM  GSL    F     GK     +L ++A   A G
Sbjct: 70  LRHEKLVQLYAVVSE-EPIYIVCEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 142 IEYLHN 147
           + Y+  
Sbjct: 127 MAYVER 132

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22  EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
           +D  ++    L L    G+  FG V+ G  +    +A+K L+    S   F+ E   + +
Sbjct: 1   KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 60
Query: 82  IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
           + H  +VQL    SE     +V EYM  GSL    F     GK     +L ++A   A G
Sbjct: 61  LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASG 117
Query: 142 IEYLHN 147
           + Y+  
Sbjct: 118 MAYVER 123

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 28  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 87
Query: 102 LVYEYMPNGSL 112
           ++ E+M  G+L
Sbjct: 88  IITEFMTYGNL 98

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 31  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 90
Query: 102 LVYEYMPNGSL 112
           ++ E+M  G+L
Sbjct: 91  IITEFMTYGNL 101

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 31  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 90
Query: 102 LVYEYMPNGSL 112
           ++ E+M  G+L
Sbjct: 91  IITEFMTYGNL 101

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEV 76
           +P+Y D  ++  + + +    G   +G VY+G      L +AVK L+       EF+ E 
Sbjct: 2   SPNY-DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
           + +  I H N+VQLLG  +      ++ E+M  G+L
Sbjct: 61  AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 30  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 89
Query: 102 LVYEYMPNGSL 112
           ++ E+M  G+L
Sbjct: 90  IITEFMTYGNL 100

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 26  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 102 LVYEYMPNGSL 112
           ++ E+M  G+L
Sbjct: 86  IITEFMTYGNL 96

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22  EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
           +D  ++    L L    G+  FG V+ G  +    +A+K L+    S   F+ E   + +
Sbjct: 10  KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 82  IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
           + H  +VQL    SE     +V EYM  GSL    F     GK     +L ++A   A G
Sbjct: 70  LRHEKLVQLYAVVSE-EPIYIVIEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 142 IEYLHN 147
           + Y+  
Sbjct: 127 MAYVER 132

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22  EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
           +D  ++    L L    G+  FG V+ G  +    +A+K L+    S   F+ E   + +
Sbjct: 3   KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 62
Query: 82  IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
           + H  +VQL    SE     +V EYM  GSL    F     GK     +L ++A   A G
Sbjct: 63  LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASG 119
Query: 142 IEYLHN 147
           + Y+  
Sbjct: 120 MAYVER 125

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEV 76
           +P+Y D  ++  + + +    G   +G VY+G      L +AVK L+       EF+ E 
Sbjct: 4   SPNY-DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 62
Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
           + +  I H N+VQLLG  +      ++ E+M  G+L
Sbjct: 63  AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 98

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEV 76
           +P+Y D  ++  + + +    G   +G VY+G      L +AVK L+       EF+ E 
Sbjct: 15  SPNY-DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 73
Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
           + +  I H N+VQLLG  +      ++ E+M  G+L
Sbjct: 74  AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 109

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22  EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
           +D  ++    L L    G+  FG V+ G  +    +A+K L+    S   F+ E   + +
Sbjct: 10  KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 82  IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
           + H  +VQL    SE     +V EYM  GSL    F     GK     +L ++A   A G
Sbjct: 70  LRHEKLVQLYAVVSE-EPIYIVIEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 142 IEYLHN 147
           + Y+  
Sbjct: 127 MAYVER 132

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 31  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 90
Query: 102 LVYEYMPNGSL 112
           ++ E+M  G+L
Sbjct: 91  IITEFMTYGNL 101

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 17/150 (11%)
Query: 12  LNRSVDNPSYED--------LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL----IAV 59
           L   VD  +YED         ++L  + + +    G   FG V  G+L         +A+
Sbjct: 19  LRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 60  KMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIF 117
           K L+   +     +F+ E S +G+  H N+++L G  ++     +V E M NGSLD  + 
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR 138
Query: 118 PNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            ++ +   F+  +L  +  G A G++YL +
Sbjct: 139 KHDAQ---FTVIQLVGMLRGIASGMKYLSD 165

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22  EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
           +D  ++    L L    G+  FG V+ G  +    +A+K L+    S   F+ E   + +
Sbjct: 10  KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 82  IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
           + H  +VQL    SE     +V EYM  GSL    F     GK     +L ++A   A G
Sbjct: 70  LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 142 IEYLHN 147
           + Y+  
Sbjct: 127 MAYVER 132

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G+  FG V+ G  +    +A+K L+    S   F+ E   + ++ H  +VQL    SE  
Sbjct: 16  GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 74
Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              +V EYM  GSL    F     GK     +L ++A   A G+ Y+  
Sbjct: 75  PIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 121

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22  EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
           +D  ++    L L    G+  FG V+ G  +    +A+K L+    S   F+ E   + +
Sbjct: 10  KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 82  IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
           + H  +VQL    SE     +V EYM  GSL    F     GK     +L ++A   A G
Sbjct: 70  LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 142 IEYLHN 147
           + Y+  
Sbjct: 127 MAYVER 132

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 39  GKDGFGSVYKGQL------HTGGLIAVKMLENSNFSAV--EFINEVSTIGRIHHVNVVQL 90
           G+D FG VYKG L           +A+K L++     +  EF +E     R+ H NVV L
Sbjct: 35  GEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCL 94
Query: 91  LGFYSEGSKRALVYEYMPNGSL 112
           LG  ++    ++++ Y  +G L
Sbjct: 95  LGVVTKDQPLSMIFSYCSHGDL 116

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEV 76
           +P+Y D  ++  + + +    G   +G VY+G      L +AVK L+       EF+ E 
Sbjct: 248 SPNY-DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 306
Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
           + +  I H N+VQLLG  +      ++ E+M  G+L
Sbjct: 307 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 342

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 39  GKDGFGSVYKGQL------HTGGLIAVKMLENSNFSAV--EFINEVSTIGRIHHVNVVQL 90
           G+D FG VYKG L           +A+K L++     +  EF +E     R+ H NVV L
Sbjct: 18  GEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCL 77
Query: 91  LGFYSEGSKRALVYEYMPNGSL 112
           LG  ++    ++++ Y  +G L
Sbjct: 78  LGVVTKDQPLSMIFSYCSHGDL 99

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEV 76
           +P+Y D  ++  + + +    G   +G VY+G      L +AVK L+       EF+ E 
Sbjct: 209 SPNY-DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 267
Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
           + +  I H N+VQLLG  +      ++ E+M  G+L
Sbjct: 268 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 39  GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V  G+L         +A+K L+   +     +F+ E S +G+  H N+++L G
Sbjct: 25  GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 84
Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             ++     +V E M NGSLD  +  ++ +   F+  +L  +  G A G++YL +
Sbjct: 85  VVTKSKPVMIVTEXMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 136

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
            P +ED  ++    L L    G   FG V+ G  +    +AVK L+  + S   F+ E +
Sbjct: 2   KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN 61
Query: 78  TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
            + ++ H  +V+L    ++     ++ EYM NGSL    F     G   +  KL ++A  
Sbjct: 62  LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQ 118
Query: 138 TARGIEYLH 146
            A G+ ++ 
Sbjct: 119 IAEGMAFIE 127

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
            P +ED  ++    L L    G   FG V+ G  +    +AVK L+  + S   F+ E +
Sbjct: 3   KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN 62
Query: 78  TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
            + ++ H  +V+L    ++     ++ EYM NGSL    F     G   +  KL ++A  
Sbjct: 63  LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQ 119
Query: 138 TARGIEYLH 146
            A G+ ++ 
Sbjct: 120 IAEGMAFIE 128

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G+  FG V+ G  +    +A+K L+    S   F+ E   + ++ H  +VQL    SE  
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 251
Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
              +V EYM  GSL    F     GK     +L ++A   A G+ Y+
Sbjct: 252 PIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYV 296

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
            P +ED  ++    L L    G   FG V+ G  +    +AVK L+  + S   F+ E +
Sbjct: 1   KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN 60
Query: 78  TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
            + ++ H  +V+L    ++     ++ EYM NGSL    F     G   +  KL ++A  
Sbjct: 61  LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQ 117
Query: 138 TARGIEYLH 146
            A G+ ++ 
Sbjct: 118 IAEGMAFIE 126

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G+  FG V+ G  +    +A+K L+    S   F+ E   + ++ H  +VQL    SE  
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 251
Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
              +V EYM  GSL    F     GK     +L ++A   A G+ Y+
Sbjct: 252 PIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYV 296

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
            P +ED  ++    L L    G   FG V+ G  +    +AVK L+  + S   F+ E +
Sbjct: 1   KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN 60
Query: 78  TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
            + ++ H  +V+L    ++     ++ EYM NGSL    F     G   +  KL ++A  
Sbjct: 61  LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQ 117
Query: 138 TARGIEYLH 146
            A G+ ++ 
Sbjct: 118 IAEGMAFIE 126

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 22  EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
           +D  ++    L L    G+  FG V+ G  +    +A+K L+    S   F+ E   + +
Sbjct: 10  KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 82  IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
           + H  +VQL    SE     +V EYM  G L    F     GK     +L ++A   A G
Sbjct: 70  LRHEKLVQLYAVVSE-EPIYIVMEYMSKGCL--LDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 142 IEYLHN 147
           + Y+  
Sbjct: 127 MAYVER 132

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 13  NRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEF 72
            +    P +ED  ++    L L    G   FG V+ G  +    +AVK L+  + S   F
Sbjct: 2   TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF 61
Query: 73  INEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLH 132
           + E + + ++ H  +V+L    ++     ++ EYM NGSL    F     G   +  KL 
Sbjct: 62  LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLL 118
Query: 133 EVALGTARGIEYLH 146
           ++A   A G+ ++ 
Sbjct: 119 DMAAQIAEGMAFIE 132

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 13  NRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEF 72
            +    P +ED  ++    L L    G   FG V+ G  +    +AVK L+  + S   F
Sbjct: 1   TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF 60
Query: 73  INEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLH 132
           + E + + ++ H  +V+L    ++     ++ EYM NGSL    F     G   +  KL 
Sbjct: 61  LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLL 117
Query: 133 EVALGTARGIEYLH 146
           ++A   A G+ ++ 
Sbjct: 118 DMAAQIAEGMAFIE 131

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G+  FG V+ G  +    +A+K L+    S   F+ E   + ++ H  +VQL    SE  
Sbjct: 276 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 334
Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
              +V EYM  GSL    F     GK     +L ++A   A G+ Y+
Sbjct: 335 PIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYV 379

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 13  NRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEF 72
            +    P +ED  ++    L L    G   FG V+ G  +    +AVK L+  + S   F
Sbjct: 2   TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF 61
Query: 73  INEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLH 132
           + E + + ++ H  +V+L    ++     ++ EYM NGSL    F     G   +  KL 
Sbjct: 62  LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLL 118
Query: 133 EVALGTARGIEYLH 146
           ++A   A G+ ++ 
Sbjct: 119 DMAAQIAEGMAFIE 132

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
            P +ED  ++    L L    G   FG V+ G  +    +AVK L+  + S   F+ E +
Sbjct: 1   KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN 60
Query: 78  TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
            + ++ H  +V+L    ++     ++ EYM NGSL    F     G   +  KL ++A  
Sbjct: 61  LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQ 117
Query: 138 TARGIEYLH 146
            A G+ ++ 
Sbjct: 118 IAEGMAFIE 126

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 39  GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G   FG V  G+L         +A+K L+   +     +F+ E S +G+  H N+++L G
Sbjct: 54  GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             ++     +V E M NGSLD  +  ++ +   F+  +L  +  G A G++YL +
Sbjct: 114 VVTKSKPVMIVTEXMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 165

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
            P +ED  ++    L L    G   FG V+ G  +    +AVK L+  + S   F+ E +
Sbjct: 10  KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN 69
Query: 78  TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
            + ++ H  +V+L    ++     ++ EYM NGSL    F     G   +  KL ++A  
Sbjct: 70  LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQ 126
Query: 138 TARGIEYLH 146
            A G+ ++ 
Sbjct: 127 IAEGMAFIE 135

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 13  NRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEF 72
            +    P +ED  ++    L L    G   FG V+ G  +    +AVK L+  + S   F
Sbjct: 4   TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF 63
Query: 73  INEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLH 132
           + E + + ++ H  +V+L    ++     ++ EYM NGSL    F     G   +  KL 
Sbjct: 64  LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLL 120
Query: 133 EVALGTARGIEYLH 146
           ++A   A G+ ++ 
Sbjct: 121 DMAAQIAEGMAFIE 134

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 13  NRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEF 72
            +    P +ED  ++    L L    G   FG V+ G  +    +AVK L+  + S   F
Sbjct: 6   TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF 65
Query: 73  INEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLH 132
           + E + + ++ H  +V+L    ++     ++ EYM NGSL    F     G   +  KL 
Sbjct: 66  LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLL 122
Query: 133 EVALGTARGIEYLH 146
           ++A   A G+ ++ 
Sbjct: 123 DMAAQIAEGMAFIE 136

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 22  EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
           +D  ++    L L    G+  FG V+ G  +    +A+K L+    S   F+ E   + +
Sbjct: 10  KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 82  IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
           + H  +VQL    SE     +V EYM  G L    F     GK     +L ++A   A G
Sbjct: 70  LRHEKLVQLYAVVSE-EPIYIVTEYMSKGCL--LDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 142 IEYLHN 147
           + Y+  
Sbjct: 127 MAYVER 132

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G+  FG V+ G  +    +A+K L+    S   F+ E   + ++ H  +VQL    SE  
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 251
Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
              +V EYM  GSL    F     GK     +L ++A   A G+ Y+
Sbjct: 252 PIYIVGEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYV 296

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
            P  +D  ++    + L    G   FG V+ G  +    +AVK L+    S   F+ E +
Sbjct: 1   KPWDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEAN 60
Query: 78  TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
            +  + H  +V+L    +      ++ EYM  GSL   +  +EG GK     KL + +  
Sbjct: 61  LMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEG-GKVL-LPKLIDFSAQ 118
Query: 138 TARGIEYLH 146
            A G+ Y+ 
Sbjct: 119 IAEGMAYIE 127

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22  EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
           +D  ++    L L    G+  FG V+ G  +    +A+K L+    S   F+ E   + +
Sbjct: 7   KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 66
Query: 82  IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
           + H  +VQL    SE     +V EYM  GSL    F     GK     +L +++   A G
Sbjct: 67  LRHEKLVQLYAVVSE-EPIYIVTEYMNKGSL--LDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 142 IEYLHN 147
           + Y+  
Sbjct: 124 MAYVER 129

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22  EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
           +D  ++    L L    G+  FG V+ G  +    +A+K L+    S   F+ E   + +
Sbjct: 7   KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 66
Query: 82  IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
           + H  +VQL    SE     +V EYM  GSL    F     GK     +L +++   A G
Sbjct: 67  LRHEKLVQLYAVVSE-EPIYIVTEYMNKGSL--LDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 142 IEYLHN 147
           + Y+  
Sbjct: 124 MAYVER 129

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
           +P++E  R+     + L    G   FG V+ G  +    +AVK L+    S   F+ E +
Sbjct: 4   DPAWEIPRE----SIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEAN 59
Query: 78  TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
            +  + H  +V+L    ++     ++ E+M  GSL   +  +EG GK     KL + +  
Sbjct: 60  LMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEG-GKVL-LPKLIDFSAQ 117
Query: 138 TARGIEYLH 146
            A G+ Y+ 
Sbjct: 118 IAEGMAYIE 126

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 14/123 (11%)
Query: 39  GKDGFGSVYKGQLH----TGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLL 91
           G+  FGSV +G L     T   +AVK ++  N S  E   F++E + +    H NV++LL
Sbjct: 43  GEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLL 102
Query: 92  GFYSEGS-----KRALVYEYMPNGSLDRHIFPN--EGRGKSFSWEKLHEVALGTARGIEY 144
           G   E S     K  ++  +M  G L  ++  +  E   K    + L +  +  A G+EY
Sbjct: 103 GVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEY 162
Query: 145 LHN 147
           L N
Sbjct: 163 LSN 165

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 52  HTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNG 110
           HTG  +AVK ++       E + NEV  +   HH NVV +   Y  G +  +V E++  G
Sbjct: 68  HTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGG 127
Query: 111 SLD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           +L     H   NE        E++  V L   R + YLHN
Sbjct: 128 ALTDIVTHTRMNE--------EQIATVCLSVLRALSYLHN 159

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 17/146 (11%)
Query: 12  LNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSN 66
           L  S   P+   LR L ++ L      G   FG+VYKG     G      +A+K+L  + 
Sbjct: 20  LTPSGTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 79
Query: 67  --FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEG 121
              + VEF++E   +  + H ++V+LLG     + + LV + MP+G L  ++     N G
Sbjct: 80  GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIG 138
Query: 122 RGKSFSWEKLHEVALGTARGIEYLHN 147
                +W       +  A+G+ YL  
Sbjct: 139 SQLLLNW------CVQIAKGMMYLEE 158

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 39  GKDGFGSVYKGQL------HTGGLIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQL 90
           G+  FG V++ +           ++AVKML  E S     +F  E + +    + N+V+L
Sbjct: 56  GEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKL 115
Query: 91  LGFYSEGSKRALVYEYMPNGSLDRHI 116
           LG  + G    L++EYM  G L+  +
Sbjct: 116 LGVCAVGKPMCLLFEYMAYGDLNEFL 141

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 19/154 (12%)
Query: 11  VLNRSVDNPSYEDLRKLLD-SGLDLTWSSGKDGFGSVYKGQLHTGGL---IAVKMLEN-- 64
            LNR V N     +  +LD + +      G+  FG V K ++   GL    A+K ++   
Sbjct: 2   ALNRKVKNNPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA 61
Query: 65  SNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSL----------- 112
           S     +F  E+  + ++ HH N++ LLG         L  EY P+G+L           
Sbjct: 62  SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLE 121
Query: 113 -DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
            D           + S ++L   A   ARG++YL
Sbjct: 122 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYL 155

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 17/139 (12%)
Query: 19  PSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSN--FSAVE 71
           P+   LR L ++ L      G   FG+VYKG     G      +A+K+L  +    + VE
Sbjct: 4   PNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE 63
Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEGRGKSFSW 128
           F++E   +  + H ++V+LLG     + + LV + MP+G L  ++     N G     +W
Sbjct: 64  FMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 122
Query: 129 EKLHEVALGTARGIEYLHN 147
                  +  A+G+ YL  
Sbjct: 123 ------CVQIAKGMMYLEE 135

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 39  GKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQL 90
           G+  FG VY+G             +AVK +  S      +EF+NE S +      +VV+L
Sbjct: 26  GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 91  LGFYSEGSKRALVYEYMPNGSLD---RHIFP----NEGRGKSFSWEKLHEVALGTARGIE 143
           LG  S+G    +V E M +G L    R + P    N GR    + +++ ++A   A G+ 
Sbjct: 86  LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIADGMA 144
Query: 144 YLH 146
           YL+
Sbjct: 145 YLN 147

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 39  GKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQL 90
           G+  FG VY+G             +AVK +  S      +EF+NE S +      +VV+L
Sbjct: 23  GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 82
Query: 91  LGFYSEGSKRALVYEYMPNGSLD---RHIFP----NEGRGKSFSWEKLHEVALGTARGIE 143
           LG  S+G    +V E M +G L    R + P    N GR    + +++ ++A   A G+ 
Sbjct: 83  LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIADGMA 141
Query: 144 YLH 146
           YL+
Sbjct: 142 YLN 144

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 39  GKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQL 90
           G+  FG VY+G             +AVK +  S      +EF+NE S +      +VV+L
Sbjct: 26  GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 91  LGFYSEGSKRALVYEYMPNGSLD---RHIFP----NEGRGKSFSWEKLHEVALGTARGIE 143
           LG  S+G    +V E M +G L    R + P    N GR    + +++ ++A   A G+ 
Sbjct: 86  LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIADGMA 144
Query: 144 YLH 146
           YL+
Sbjct: 145 YLN 147

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 39  GKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQL 90
           G+  FG VY+G             +AVK +  S      +EF+NE S +      +VV+L
Sbjct: 26  GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 91  LGFYSEGSKRALVYEYMPNGSLD---RHIFP----NEGRGKSFSWEKLHEVALGTARGIE 143
           LG  S+G    +V E M +G L    R + P    N GR    + +++ ++A   A G+ 
Sbjct: 86  LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIADGMA 144
Query: 144 YLH 146
           YL+
Sbjct: 145 YLN 147

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 19  PSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKML-ENSNFSA-VE 71
           P+   LR L ++ L      G   FG+VYKG     G      +A+K+L EN++  A  E
Sbjct: 6   PNQALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKE 65
Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKL 131
            ++E   +  +    V +LLG     S   LV + MP G L  H+  N GR  S   + L
Sbjct: 66  ILDEAYVMAGVGSPYVSRLLGI-CLTSTVQLVTQLMPYGCLLDHVRENRGRLGS---QDL 121
Query: 132 HEVALGTARGIEYLHN 147
               +  A+G+ YL +
Sbjct: 122 LNWCMQIAKGMSYLED 137

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 39  GKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQL 90
           G+  FG VY+G             +AVK +  S      +EF+NE S +      +VV+L
Sbjct: 27  GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 86
Query: 91  LGFYSEGSKRALVYEYMPNGSLD---RHIFP----NEGRGKSFSWEKLHEVALGTARGIE 143
           LG  S+G    +V E M +G L    R + P    N GR    + +++ ++A   A G+ 
Sbjct: 87  LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIADGMA 145
Query: 144 YLH 146
           YL+
Sbjct: 146 YLN 148

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 39  GKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQL 90
           G+  FG VY+G             +AVK +  S      +EF+NE S +      +VV+L
Sbjct: 26  GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 91  LGFYSEGSKRALVYEYMPNGSLD---RHIFP----NEGRGKSFSWEKLHEVALGTARGIE 143
           LG  S+G    +V E M +G L    R + P    N GR    + +++ ++A   A G+ 
Sbjct: 86  LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIADGMA 144
Query: 144 YLH 146
           YL+
Sbjct: 145 YLN 147

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 39  GKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQL 90
           G+  FG VY+G             +AVK +  S      +EF+NE S +      +VV+L
Sbjct: 26  GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 91  LGFYSEGSKRALVYEYMPNGSLD---RHIFP----NEGRGKSFSWEKLHEVALGTARGIE 143
           LG  S+G    +V E M +G L    R + P    N GR    + +++ ++A   A G+ 
Sbjct: 86  LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIADGMA 144
Query: 144 YLH 146
           YL+
Sbjct: 145 YLN 147

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 43  FGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA- 101
           FG V+K QL     +AVK+    +  + +   E+ +   + H N++Q +     GS    
Sbjct: 28  FGCVWKAQL-MNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEV 86
Query: 102 ---LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              L+  +   GSL  ++     +G   +W +L  VA   +RG+ YLH 
Sbjct: 87  ELWLITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYLHE 130

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 39  GKDGFGSVYKGQL------HTGGLIAVKMLENSN--FSAVEFINEVSTIGRIHHVNVVQL 90
           G+  FG VY+G             +AVK +  S      +EF+NE S +      +VV+L
Sbjct: 25  GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 84
Query: 91  LGFYSEGSKRALVYEYMPNGSLD---RHIFP----NEGRGKSFSWEKLHEVALGTARGIE 143
           LG  S+G    +V E M +G L    R + P    N GR    + +++ ++A   A G+ 
Sbjct: 85  LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIADGMA 143
Query: 144 YLH 146
           YL+
Sbjct: 144 YLN 146

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
            P +ED  ++    L L    G    G V+ G  +    +AVK L+  + S   F+ E +
Sbjct: 1   KPWWEDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN 60
Query: 78  TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
            + ++ H  +V+L    ++     ++ EYM NGSL    F     G   +  KL ++A  
Sbjct: 61  LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQ 117
Query: 138 TARGIEYLHN 147
            A G+ ++  
Sbjct: 118 IAEGMAFIEE 127

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 21/127 (16%)
Query: 39  GKDGFGSVYKGQLHT------GGLIAVKMLENSNFSA-VEFINEVSTIGRIHHVNVVQLL 91
           G+  FG V+  + +         L+AVK L++   +A  +F  E   +  + H ++V+  
Sbjct: 24  GEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFY 83
Query: 92  GFYSEGSKRALVYEYMPNGSLDRHIF-------------PNEGRGKSFSWEKLHEVALGT 138
           G   +G    +V+EYM +G L++ +              P + +G+    + LH +A   
Sbjct: 84  GVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH-IASQI 142
Query: 139 ARGIEYL 145
           A G+ YL
Sbjct: 143 ASGMVYL 149

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 43  FGSVYKGQLHTGG-----LIAVKMLEN----SNFSAVEFINEVSTIGRIHHVNVVQLLGF 93
           FG+V+KG     G      + +K++E+     +F AV   + +  IG + H ++V+LLG 
Sbjct: 26  FGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAV--TDHMLAIGSLDHAHIVRLLGL 83
Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              GS   LV +Y+P GSL  H+  + G   +   + L    +  A+G+ YL  
Sbjct: 84  -CPGSSLQLVTQYLPLGSLLDHVRQHRG---ALGPQLLLNWGVQIAKGMYYLEE 133

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 43  FGSVYKGQLHTGG-----LIAVKMLEN----SNFSAVEFINEVSTIGRIHHVNVVQLLGF 93
           FG+V+KG     G      + +K++E+     +F AV   + +  IG + H ++V+LLG 
Sbjct: 44  FGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAV--TDHMLAIGSLDHAHIVRLLGL 101
Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              GS   LV +Y+P GSL  H+  + G   +   + L    +  A+G+ YL  
Sbjct: 102 -CPGSSLQLVTQYLPLGSLLDHVRQHRG---ALGPQLLLNWGVQIAKGMYYLEE 151

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 32  LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
           L L    G   FG V+ G  +    +AVK L+  + S   F+ E + + ++ H  +V+L 
Sbjct: 10  LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 69
Query: 92  GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              ++     ++ EYM NGSL    F     G   +  KL ++A   A G+ ++ 
Sbjct: 70  AVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 32  LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
           L L    G   FG V+ G  +    +AVK L+  + S   F+ E + + ++ H  +V+L 
Sbjct: 11  LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 70
Query: 92  GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              ++     ++ EYM NGSL    F     G   +  KL ++A   A G+ ++ 
Sbjct: 71  AVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 122

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 32  LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
           L L     +  FG V+K QL     +AVK+    +  + +   EV ++  + H N++Q +
Sbjct: 26  LQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFI 84
Query: 92  GFYSEGSKRA----LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           G    G+       L+  +   GSL   +  N       SW +L  +A   ARG+ YLH 
Sbjct: 85  GAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHE 139

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 15/114 (13%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G+  FG V K +      +A+K +E+ +     FI E+  + R++H N+V+L G  +  +
Sbjct: 18  GRGAFGVVCKAKWRAKD-VAIKQIESESERKA-FIVELRQLSRVNHPNIVKLYG--ACLN 73
Query: 99  KRALVYEYMPNGSL-----DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              LV EY   GSL          P      + SW       L  ++G+ YLH+
Sbjct: 74  PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHS 121

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 15/114 (13%)
Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G+  FG V K +      +A+K +E+ +     FI E+  + R++H N+V+L G  +  +
Sbjct: 17  GRGAFGVVCKAKWRAKD-VAIKQIESESERKA-FIVELRQLSRVNHPNIVKLYG--ACLN 72
Query: 99  KRALVYEYMPNGSL-----DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              LV EY   GSL          P      + SW       L  ++G+ YLH+
Sbjct: 73  PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHS 120

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 39  GKDGFGSVYKGQLHTGGL-IAVK--MLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
           G   + +VYKG   T G+ +A+K   L++   +    I E+S +  + H N+V+L     
Sbjct: 14  GNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIH 73
Query: 96  EGSKRALVYEYMPNG---SLDRHIFPNEGRG------KSFSWEKLHEVAL 136
             +K  LV+E+M N     +D     N  RG      K F W+ L  +A 
Sbjct: 74  TENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	148
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-44
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-42
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-40
3soc_A	322	Activin receptor type-2A; structural genomics cons	7e-28
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-27
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-24
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	5e-24
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-24
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-24
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-23
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-23
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-23
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-22
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-22
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-19
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-19
3q4u_A	301	Activin receptor type-1; structural genomics conso	5e-19
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	6e-19
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	6e-19
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	8e-19
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-18
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-18
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	5e-18
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-18
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	6e-18
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	6e-18
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-17
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-17
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-17
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-17
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-17
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-17
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-17
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	5e-17
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	8e-17
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-16
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-16
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-16
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-16
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-16
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-16
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-16
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-16
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-16
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-16
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	6e-16
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	6e-16
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	6e-16
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	6e-16
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	7e-16
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	9e-16
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	9e-16
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-15
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-15
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	4e-15
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	5e-15
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	5e-15
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	7e-15
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-14
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-14
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-14
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-14
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	5e-14
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-13
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-13
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-13
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-13
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	4e-13
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	7e-13
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-12
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-12
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-12
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-12
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-12
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-12
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-12
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-12
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-12
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-12
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	9e-12
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	9e-12
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-11
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-11
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-11
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-11
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	3e-11
2a19_B	284	Interferon-induced, double-stranded RNA-activated	6e-11
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-10
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	5e-10
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	9e-10
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-09
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-09
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-09
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-09
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-09
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-09
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-09
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	6e-09
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	8e-09
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	9e-09
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	9e-09
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-08
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-08
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-08
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-08
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-08
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-08
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-08
3niz_A	311	Rhodanese family protein; structural genomics, str	4e-08
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	5e-08
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	7e-08
3an0_A	340	Dual specificity mitogen-activated protein kinase;	8e-08
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	9e-08
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-07
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-07
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-07
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-07
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-07
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-07
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-07
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-07
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-07
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-07
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-07
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-07
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-07
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-07
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-07
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-07
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-07
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-07
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	5e-07
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	6e-07
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	7e-07
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	7e-07
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	8e-07
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-06
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-06
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-06
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-06
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-06
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-06
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-06
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-06
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	5e-06
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	5e-06
3bhy_A	283	Death-associated protein kinase 3; death associate	8e-06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	8e-06
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	9e-06
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-05
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-05
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-05
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-05
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	6e-05
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-04
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-04
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-04
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	3e-04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-04
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-04
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	4e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	5e-04
3uqc_A	286	Probable conserved transmembrane protein; structur	7e-04
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	7e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	7e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  146 bits (371), Expect = 3e-44
 Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 2/110 (1%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAV--EFINEVSTIGRIHHVNVVQLLGFYSE 96
           G+ GFG VYKG+L  G L+AVK L+         +F  EV  I    H N+++L GF   
Sbjct: 39  GRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT 98

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
            ++R LVY YM NGS+   +           W K   +ALG+ARG+ YLH
Sbjct: 99  PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 148

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  142 bits (360), Expect = 1e-42
 Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAV-EFINEVSTIGRIHHVNVVQLLGFYSEG 97
           G   FG VYKG L  G  +A+K     +   + EF  E+ T+    H ++V L+GF  E 
Sbjct: 48  GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107

Query: 98  SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
           ++  L+Y+YM NG+L RH++ ++    S SWE+  E+ +G ARG+ YLH  
Sbjct: 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR 158

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  136 bits (345), Expect = 2e-40
 Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 7/113 (6%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAV-----EFINEVSTIGRIHHVNVVQLLGF 93
           G+ GFG VYKG ++    +AVK L             +F  E+  + +  H N+V+LLGF
Sbjct: 40  GEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98

Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
            S+G    LVY YMPNGSL   +   +G     SW    ++A G A GI +LH
Sbjct: 99  SSDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSWHMRCKIAQGAANGINFLH 150

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  104 bits (260), Expect = 7e-28
 Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 10/113 (8%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
            +  FG V+K QL     +AVK+    +  + +   EV ++  + H N++Q +G    G+
Sbjct: 33  ARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT 91

Query: 99  KRA----LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                  L+  +   GSL   +     +    SW +L  +A   ARG+ YLH 
Sbjct: 92  SVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHE 139

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  102 bits (255), Expect = 3e-27
 Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 5/112 (4%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+V++ + H G  +AVK+L   +F A    EF+ EV+ + R+ H N+V  +G  +
Sbjct: 46  GAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           +    ++V EY+  GSL R +  +  R +     +   +A   A+G+ YLHN
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGAR-EQLDERRRLSMAYDVAKGMNYLHN 155

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 94.3 bits (235), Expect = 3e-24
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 8/112 (7%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYS 95
           GK  FG VY G+ H  G +A+++++    +      F  EV    +  H NVV  +G   
Sbjct: 42  GKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                A++       +L   +             K  ++A    +G+ YLH 
Sbjct: 100 SPPHLAIITSLCKGRTLYSVV---RDAKIVLDVNKTRQIAQEIVKGMGYLHA 148

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 92.7 bits (231), Expect = 5e-24
 Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 11/114 (9%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAV-----EFINEVSTIGRIHHVNVVQLLGF 93
           G  GFG VY+     G  +AVK   +     +         E      + H N++ L G 
Sbjct: 16  GIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74

Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             +     LV E+   G L+R +      GK    + L   A+  ARG+ YLH+
Sbjct: 75  CLKEPNLCLVMEFARGGPLNRVL-----SGKRIPPDILVNWAVQIARGMNYLHD 123

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 92.7 bits (231), Expect = 6e-24
 Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYS 95
            ++  G ++KG+   G  I VK+L+  ++S     +F  E   +    H NV+ +LG   
Sbjct: 19  NENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77

Query: 96  E--GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                   L+  +MP GSL   +  +EG        +  + AL  ARG+ +LH 
Sbjct: 78  SPPAPHPTLITHWMPYGSLYNVL--HEGTNFVVDQSQAVKFALDMARGMAFLHT 129

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 92.2 bits (229), Expect = 2e-23
 Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 15/116 (12%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINE--VSTIGRIHHVNVVQLLGFYSE 96
           G+  +G+VYKG L     +AVK+   +N     FINE  +  +  + H N+ + +     
Sbjct: 22  GRGRYGAVYKGSLD-ERPVAVKVFSFANRQ--NFINEKNIYRVPLMEHDNIARFIVGDER 78

Query: 97  GSKRA-----LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            +        LV EY PNGSL +++        +  W     +A    RG+ YLH 
Sbjct: 79  VTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAHSVTRGLAYLHT 129

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 90.8 bits (226), Expect = 4e-23
 Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 14/118 (11%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAV--------EFINEVSTIGRIHHVNVVQ 89
           GK GFG V+KG+ +    ++A+K L   +            EF  EV  +  ++H N+V+
Sbjct: 28  GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87

Query: 90  LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           L G         +V E++P G L   +     +     W     + L  A GIEY+ N
Sbjct: 88  LYGLMHNPP--RMVMEFVPCGDLYHRL---LDKAHPIKWSVKLRLMLDIALGIEYMQN 140

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 90.9 bits (226), Expect = 5e-23
 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 5/109 (4%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G+  FG V K +      +A+K +E+ +     FI E+  + R++H N+V+L G      
Sbjct: 17  GRGAFGVVCKAKWR-AKDVAIKQIESESERK-AFIVELRQLSRVNHPNIVKLYGACLN-- 72

Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              LV EY   GSL   +         ++        L  ++G+ YLH+
Sbjct: 73  PVCLVMEYAEGGSLYNVLH-GAEPLPYYTAAHAMSWCLQCSQGVAYLHS 120

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 89.3 bits (222), Expect = 2e-22
 Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 9/111 (8%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+VYKG+ H  G +AVKML  +  +      F NEV  + +  HVN++  +G+ +
Sbjct: 33  GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              + A+V ++    SL  H+         F  +KL ++A  TARG++YLH
Sbjct: 91  AP-QLAIVTQWCEGSSLYHHL---HASETKFEMKKLIDIARQTARGMDYLH 137

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 89.3 bits (222), Expect = 2e-22
 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 5/111 (4%)

Query: 39  GKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAV-EFINEVSTIGRIHHVNVVQLLGFYSE 96
           GK  FG   K     TG ++ +K L   +      F+ EV  +  + H NV++ +G   +
Sbjct: 19  GKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK 78

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             +   + EY+  G+L   I   +     + W +    A   A G+ YLH+
Sbjct: 79  DKRLNFITEYIKGGTLRGII---KSMDSQYPWSQRVSFAKDIASGMAYLHS 126

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 81.3 bits (201), Expect = 2e-19
 Identities = 23/113 (20%), Positives = 51/113 (45%), Gaps = 10/113 (8%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           GK  +G V+ G+   G  +AVK+   +  ++     E+     + H N++  +    +G+
Sbjct: 46  GKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGT 104

Query: 99  KR----ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                  L+ +Y  NGSL  ++     +  +   + + ++A  +  G+ +LH 
Sbjct: 105 GSWTQLYLITDYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVSGLCHLHT 152

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 81.4 bits (201), Expect = 3e-19
 Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 10/112 (8%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLG----FY 94
           GK  FG V++G+   G  +AVK+  +    +     E+     + H N++  +       
Sbjct: 51  GKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 109

Query: 95  SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              ++  LV +Y  +GSL  ++        + + E + ++AL TA G+ +LH
Sbjct: 110 GTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 156

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 80.1 bits (198), Expect = 5e-19
 Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 10/112 (8%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLG----FY 94
           GK  +G V++G    G  +AVK+  + +  +     E+     + H N++  +       
Sbjct: 17  GKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75

Query: 95  SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
              ++  L+  Y   GSL  ++     +  +        + L  A G+ +LH
Sbjct: 76  HSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLH 122

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 80.0 bits (198), Expect = 6e-19
 Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 11/114 (9%)

Query: 43  FGSVYKGQLHTGG------LIAVKML-ENSNFSA-VEFINEVSTIGRIHHVNVVQLLGFY 94
           FG VY+GQ+           +AVK L E  +    ++F+ E   I + +H N+V+ +G  
Sbjct: 43  FGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS 102

Query: 95  SEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
            +   R ++ E M  G L    R   P   +  S +   L  VA   A G +YL
Sbjct: 103 LQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 79.2 bits (196), Expect = 8e-19
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 3/103 (2%)

Query: 43  FGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL 102
           FG V  G+      +AVKM++  + S  EF  E  T+ ++ H  +V+  G  S+     +
Sbjct: 21  FGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYI 80

Query: 103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           V EY+ NG L  ++      GK     +L E+      G+ +L
Sbjct: 81  VTEYISNGCLLNYL---RSHGKGLEPSQLLEMCYDVCEGMAFL 120

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 79.7 bits (197), Expect = 1e-18
 Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 11/114 (9%)

Query: 43  FGSVYKGQLHTGG------LIAVKML-ENSNFSA-VEFINEVSTIGRIHHVNVVQLLGFY 94
           FG VY+GQ+           +AVK L E  +    ++F+ E   I + +H N+V+ +G  
Sbjct: 84  FGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS 143

Query: 95  SEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
            +   R ++ E M  G L    R   P   +  S +   L  VA   A G +YL
Sbjct: 144 LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 78.4 bits (194), Expect = 2e-18
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 3/104 (2%)

Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 26  YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85

Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           ++ E+M  G+L    +  E   +  S   L  +A   +  +EYL
Sbjct: 86  IITEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAMEYL 127

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 76.9 bits (190), Expect = 5e-18
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 43  FGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL 102
           FG V+ G       +A+K +     S  +FI E   + ++ H  +VQL G   E +   L
Sbjct: 21  FGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICL 80

Query: 103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           V E+M +G L  ++    G    F+ E L  + L    G+ YL
Sbjct: 81  VTEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYL 120

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 76.9 bits (190), Expect = 5e-18
 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 15/109 (13%)

Query: 43  FGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLG------FYSE 96
           FG V+ G  +    +AVK L+  + S   F+ E + + ++ H  +V+L         Y  
Sbjct: 26  FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIY-- 83

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
                ++ EYM NGSL    F     G   +  KL ++A   A G+ ++
Sbjct: 84  -----IITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 125

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 76.9 bits (190), Expect = 6e-18
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 3/103 (2%)

Query: 43  FGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL 102
           FG V  G+      +A+KM++  + S  EFI E   +  + H  +VQL G  ++     +
Sbjct: 37  FGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96

Query: 103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           + EYM NG L  ++         F  ++L E+       +EYL
Sbjct: 97  ITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYL 136

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 78.3 bits (193), Expect = 6e-18
 Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 3/105 (2%)

Query: 43  FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
           +G VY+G      L +AVK L+       EF+ E + +  I H N+VQLLG  +      
Sbjct: 233 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 292

Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
           ++ E+M  G+L    +  E   +  S   L  +A   +  +EYL 
Sbjct: 293 IITEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAMEYLE 335

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 76.9 bits (190), Expect = 1e-17
 Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 6/107 (5%)

Query: 43  FGSVYKGQLHTGGL-IAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSK 99
           FG V+ G+L      +AVK            +F+ E   + +  H N+V+L+G  ++   
Sbjct: 127 FGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP 186

Query: 100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
             +V E +  G     +      G     + L ++    A G+EYL 
Sbjct: 187 IYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVGDAAAGMEYLE 230

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 76.2 bits (188), Expect = 2e-17
 Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 14/121 (11%)

Query: 39  GKDGFGSVYKGQLHTGG------LIAVKML-ENSNFSAV-EFINEVSTIGRIHHVNVVQL 90
           G+  FG VY+G             +A+K + E ++     EF+NE S +   +  +VV+L
Sbjct: 34  GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 93

Query: 91  LGFYSEGSKRALVYEYMPNGSLD------RHIFPNEGRGKSFSWEKLHEVALGTARGIEY 144
           LG  S+G    ++ E M  G L       R    N       S  K+ ++A   A G+ Y
Sbjct: 94  LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAY 153

Query: 145 L 145
           L
Sbjct: 154 L 154

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 76.2 bits (188), Expect = 2e-17
 Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 21/151 (13%)

Query: 16  VDNPSY---EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG------LIAVKML-ENS 65
           ++NP Y     +  +    + L W  G+  FG V+  + H         L+AVK L E S
Sbjct: 24  IENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS 83

Query: 66  NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL-----------DR 114
             +  +F  E   +  + H ++V+  G  +EG    +V+EYM +G L             
Sbjct: 84  ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKL 143

Query: 115 HIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
                +         +L  VA   A G+ YL
Sbjct: 144 LAGGEDVAPGPLGLGQLLAVASQVAAGMVYL 174

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 75.3 bits (186), Expect = 2e-17
 Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 19/126 (15%)

Query: 39  GKDGFGSVYKGQLHTGG------LIAVKMLENSNFSAV-EFINEVSTIGRIHHVNVVQLL 91
           G+  FG V+  + +         L+AVK L++   +A  +F  E   +  + H ++V+  
Sbjct: 24  GEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFY 83

Query: 92  GFYSEGSKRALVYEYMPNGSL------------DRHIFPNEGRGKSFSWEKLHEVALGTA 139
           G   +G    +V+EYM +G L                             ++  +A   A
Sbjct: 84  GVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIA 143

Query: 140 RGIEYL 145
            G+ YL
Sbjct: 144 SGMVYL 149

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 75.3 bits (186), Expect = 3e-17
 Identities = 31/127 (24%), Positives = 49/127 (38%), Gaps = 20/127 (15%)

Query: 39  GKDGFGSVYKGQLHTGG------LIAVKML-ENSNFSAV-EFINEVSTIGRIHHVNVVQL 90
           G+D FG VYKG L           +A+K L + +      EF +E     R+ H NVV L
Sbjct: 18  GEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCL 77

Query: 91  LGFYSEGSKRALVYEYMPNGSLD------------RHIFPNEGRGKSFSWEKLHEVALGT 138
           LG  ++    ++++ Y  +G L                  +     +        +    
Sbjct: 78  LGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQI 137

Query: 139 ARGIEYL 145
           A G+EYL
Sbjct: 138 AAGMEYL 144

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 75.3 bits (186), Expect = 3e-17
 Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 11/110 (10%)

Query: 43  FGSVYKGQLHTGGL-----IAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
           FG+VYKG     G      +A+K L    S  +  E ++E   +  + + +V +LLG   
Sbjct: 28  FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI-C 86

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
             S   L+ + MP G L  ++  ++        + L    +  A+G+ YL
Sbjct: 87  LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYL 133

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 75.9 bits (187), Expect = 3e-17
 Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 3/103 (2%)

Query: 43  FGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL 102
           FG V+    +    +AVK ++  + S   F+ E + +  + H  +V+L    ++     +
Sbjct: 201 FGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYI 259

Query: 103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           + E+M  GSL    F     G      KL + +   A G+ ++
Sbjct: 260 ITEFMAKGSLLD--FLKSDEGSKQPLPKLIDFSAQIAEGMAFI 300

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 75.1 bits (185), Expect = 5e-17
 Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 9/134 (6%)

Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG----LIAVKML--ENSNFSAVE 71
              +E  ++L  + + +    G   FG V  G+L         +A+K L    +     +
Sbjct: 33  QTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 92

Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKL 131
           F+ E S +G+  H N+++L G  ++     +V EYM NGSLD  +  ++ +   F+  +L
Sbjct: 93  FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQL 149

Query: 132 HEVALGTARGIEYL 145
             +  G A G++YL
Sbjct: 150 VGMLRGIASGMKYL 163

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 74.9 bits (184), Expect = 8e-17
 Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 43  FGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL 102
           FG V+ G  +    +A+K L+    S   F+ E   + ++ H  +VQL    SE     +
Sbjct: 280 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 338

Query: 103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           V EYM  GSL    F     GK     +L ++A   A G+ Y+
Sbjct: 339 VTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYV 379

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 73.5 bits (181), Expect = 1e-16
 Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 10/114 (8%)

Query: 39  GKDGFGSVYKGQLHTGG----LIAVKML-ENSNFSAV-EFINEVSTIGRIHHVNVVQLLG 92
           G+  FG VY G L          AVK L   ++   V +F+ E   +    H NV+ LLG
Sbjct: 34  GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 93

Query: 93  FYSEGSKRAL-VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
                    L V  YM +G L   I        + + + L    L  A+G++YL
Sbjct: 94  ICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKYL 144

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 73.9 bits (182), Expect = 1e-16
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 43  FGSVYKGQLHTGG----LIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
            G V  G+L   G     +A+K L    +     +F++E S +G+  H N+++L G  + 
Sbjct: 62  SGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR 121

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           G    +V EYM NGSLD  +  ++G+   F+  +L  +  G   G+ YL
Sbjct: 122 GRLAMIVTEYMENGSLDTFLRTHDGQ---FTIMQLVGMLRGVGAGMRYL 167

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 73.1 bits (180), Expect = 2e-16
 Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 12/139 (8%)

Query: 17  DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKML--ENSNFSA 69
              +  D        L      G+  FG V   +    G      +AVK L  E+     
Sbjct: 8   KPATEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI 67

Query: 70  VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA--LVYEYMPNGSLDRHIFPNEGRGKSFS 127
            +   E+  +  ++H N+V+  G  +E       L+ E++P+GSL  ++  N+ +    +
Sbjct: 68  ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---IN 124

Query: 128 WEKLHEVALGTARGIEYLH 146
            ++  + A+   +G++YL 
Sbjct: 125 LKQQLKYAVQICKGMDYLG 143

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 73.1 bits (180), Expect = 2e-16
 Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 11/112 (9%)

Query: 43  FGSVYKGQLH-----TGGLIAVKML-ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           FGSV   +       TG ++AVK L  ++     +F  E+  +  + H N+V+  G    
Sbjct: 23  FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 82

Query: 97  GSKRA--LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
             +R   L+ EY+P GSL  ++  ++ R       KL +      +G+EYL 
Sbjct: 83  AGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG 131

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 73.6 bits (181), Expect = 2e-16
 Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 43  FGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL 102
           FG V+ G  +    +A+K L+    S   F+ E   + ++ H  +VQL    SE     +
Sbjct: 197 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 255

Query: 103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           V EYM  GSL    F     GK     +L ++A   A G+ Y+
Sbjct: 256 VTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYV 296

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 72.6 bits (179), Expect = 2e-16
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 5/104 (4%)

Query: 43  FGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA- 101
           FG V  G    G  +AVK +  ++ +A  F+ E S + ++ H N+VQLLG   E      
Sbjct: 34  FGDVMLGDYR-GNKVAVKCI-KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY 91

Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           +V EYM  GSL    +           + L + +L     +EYL
Sbjct: 92  IVTEYMAKGSLVD--YLRSRGRSVLGGDCLLKFSLDVCEAMEYL 133

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 73.1 bits (180), Expect = 2e-16
 Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 18/121 (14%)

Query: 43  FGSVYKGQLHTGGL---IAVKML-ENSNFSAV-EFINEVSTIGRI-HHVNVVQLLGFYSE 96
           FG V K ++   GL    A+K + E ++     +F  E+  + ++ HH N++ LLG    
Sbjct: 38  FGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH 97

Query: 97  GSKRALVYEYMPNGSL------------DRHIFPNEGRGKSFSWEKLHEVALGTARGIEY 144
                L  EY P+G+L            D           + S ++L   A   ARG++Y
Sbjct: 98  RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDY 157

Query: 145 L 145
           L
Sbjct: 158 L 158

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 72.7 bits (179), Expect = 2e-16
 Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 11/110 (10%)

Query: 43  FGSVYKGQLHTGG-----LIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
           FG+VYKG     G      +A+K L    S  +  E ++E   +  + + +V +LLG   
Sbjct: 28  FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI-C 86

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
             S   L+ + MP G L  ++  ++        + L    +  A+G+ YL
Sbjct: 87  LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYL 133

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 72.8 bits (179), Expect = 3e-16
 Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 11/112 (9%)

Query: 43  FGSVYKGQLH-----TGGLIAVKMLENSNFSAV-EFINEVSTIGRIHHVNVVQLLGFYSE 96
           FGSV   +       TG ++AVK L++S    + +F  E+  +  + H N+V+  G    
Sbjct: 54  FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 113

Query: 97  GSKRA--LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
             +R   L+ EY+P GSL  ++  ++ R       KL +      +G+EYL 
Sbjct: 114 AGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG 162

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 72.7 bits (179), Expect = 3e-16
 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 10/110 (9%)

Query: 43  FGSVYKGQLHTGG-----LIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
           FG VYKG L T        +A+K L    +    V+F+ E   +G+  H N+++L G  S
Sbjct: 57  FGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS 116

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           +     ++ EYM NG+LD+ +   +G    FS  +L  +  G A G++YL
Sbjct: 117 KYKPMMIITEYMENGALDKFLREKDGE---FSVLQLVGMLRGIAAGMKYL 163

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 72.0 bits (177), Expect = 6e-16
 Identities = 38/174 (21%), Positives = 65/174 (37%), Gaps = 38/174 (21%)

Query: 10  VVLNRSVDNPSYEDLRKLLDSGLD----------LTWSSGKDGFGSVYKGQLHTGG---- 55
           ++L+R   NP Y+ +  LL+  L                G+  FG V++ +         
Sbjct: 17  LLLDRLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEP 76

Query: 56  --LIAVKML-ENSNFSA-VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGS 111
             ++AVKML E ++     +F  E + +    + N+V+LLG  + G    L++EYM  G 
Sbjct: 77  FTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGD 136

Query: 112 L--------------------DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           L                          +       S  +   +A   A G+ YL
Sbjct: 137 LNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL 190

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 71.5 bits (176), Expect = 6e-16
 Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 9/108 (8%)

Query: 43  FGSVYKGQLHTGG---LIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
           FGSV +G          +A+K+L          E + E   + ++ +  +V+L+G   + 
Sbjct: 23  FGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV-CQA 81

Query: 98  SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
               LV E    G L + +    G+ +      + E+    + G++YL
Sbjct: 82  EALMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQVSMGMKYL 126

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 72.1 bits (177), Expect = 6e-16
 Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 10/114 (8%)

Query: 39  GKDGFGSVYKGQLHTGG----LIAVKML-ENSNFSAV-EFINEVSTIGRIHHVNVVQLLG 92
           G+  FG VY G L          AVK L   ++   V +F+ E   +    H NV+ LLG
Sbjct: 98  GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 157

Query: 93  F-YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
                     +V  YM +G L   I        + + + L    L  A+G+++L
Sbjct: 158 ICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKFL 208

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 71.6 bits (176), Expect = 6e-16
 Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 14/113 (12%)

Query: 43  FGSVYKGQLH-----TGGLIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
           FG V           TG ++AVK L  +        +  E+  +  ++H ++++  G   
Sbjct: 44  FGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCE 103

Query: 96  EGSKRA--LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
           +    +  LV EY+P GSL  ++        S    +L   A     G+ YLH
Sbjct: 104 DAGAASLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLH 151

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 71.6 bits (176), Expect = 7e-16
 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 11/112 (9%)

Query: 43  FGSVYKGQLHTGG-----LIAVKML-ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           FGSV   +    G     L+AVK L  +      +F  E+  +  +H   +V+  G    
Sbjct: 36  FGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG 95

Query: 97  GSKRA--LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
             +++  LV EY+P+G L   +  +  R       +L   +    +G+EYL 
Sbjct: 96  PGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLG 144

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 71.2 bits (175), Expect = 9e-16
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 12/112 (10%)

Query: 43  FGSVYKGQLHTGGL--------IAVKML-ENSNFSAVEFINEVSTIGRIHHVNVVQLLGF 93
           F  ++KG     G         + +K+L +     +  F    S + ++ H ++V   G 
Sbjct: 21  FTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGV 80

Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
              G +  LV E++  GSLD ++   +      +     EVA   A  + +L
Sbjct: 81  CVCGDENILVQEFVKFGSLDTYL---KKNKNCINILWKLEVAKQLAAAMHFL 129

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 71.2 bits (175), Expect = 9e-16
 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 11/110 (10%)

Query: 43  FGSVYKGQLHTGGL-----IAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
           FG+V+KG     G      + +K++  ++   S     + +  IG + H ++V+LLG   
Sbjct: 26  FGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGL-C 84

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
            GS   LV +Y+P GSL  H+  + G       + L    +  A+G+ YL
Sbjct: 85  PGSSLQLVTQYLPLGSLLDHVRQHRGA---LGPQLLLNWGVQIAKGMYYL 131

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 70.8 bits (174), Expect = 1e-15
 Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 16/118 (13%)

Query: 43  FGSVYKGQLHTGG----LIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
           FGSV +G L         +AVK ++  N S  E   F++E + +    H NV++LLG   
Sbjct: 47  FGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106

Query: 96  EGSKRA-----LVYEYMPNGSLD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           E S +      ++  +M  G L     +    E   K    + L +  +  A G+EYL
Sbjct: 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRL-ETGPKHIPLQTLLKFMVDIALGMEYL 163

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 70.0 bits (172), Expect = 2e-15
 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 10/114 (8%)

Query: 39  GKDGFGSVYKGQLHTGG----LIAVKML-ENSNFSAV-EFINEVSTIGRIHHVNVVQLLG 92
           GK  FG VY G+           A+K L   +    V  F+ E   +  ++H NV+ L+G
Sbjct: 30  GKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIG 89

Query: 93  FYSEGSKRAL-VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
                      +  YM +G L + I       ++ + + L    L  ARG+EYL
Sbjct: 90  IMLPPEGLPHVLLPYMCHGDLLQFI---RSPQRNPTVKDLISFGLQVARGMEYL 140

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 69.2 bits (170), Expect = 4e-15
 Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 10/109 (9%)

Query: 43  FGSVYKGQLHTGG----LIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           FG V++G   +       +A+K      S+    +F+ E  T+ +  H ++V+L+G  +E
Sbjct: 28  FGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE 87

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
            +   ++ E    G L   +   +          L   A   +  + YL
Sbjct: 88  -NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYL 132

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 70.0 bits (171), Expect = 5e-15
 Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 9/108 (8%)

Query: 43  FGSVYKGQLHTGG---LIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
           FGSV +G          +A+K+L          E + E   + ++ +  +V+L+G   + 
Sbjct: 349 FGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV-CQA 407

Query: 98  SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
               LV E    G L + +    G+ +      + E+    + G++YL
Sbjct: 408 EALMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQVSMGMKYL 452

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 68.9 bits (169), Expect = 5e-15
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 9/114 (7%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSE 96
           GK  +G VY G  L     IA+K +   +    + +  E++    + H N+VQ LG +SE
Sbjct: 31  GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE 90

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA---RGIEYLHN 147
                +  E +P GSL   +    G  K    E+   +   T     G++YLH+
Sbjct: 91  NGFIKIFMEQVPGGSLSALLRSKWGPLK--DNEQT--IGFYTKQILEGLKYLHD 140

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 68.9 bits (169), Expect = 7e-15
 Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 17/119 (14%)

Query: 43  FGSVYKGQLHTGG----LIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
           FGSV + QL         +AVKML+    ++ +   F+ E + +    H +V +L+G   
Sbjct: 36  FGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL 95

Query: 96  EGSKRA------LVYEYMPNGSLD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
               +       ++  +M +G L          E    +   + L    +  A G+EYL
Sbjct: 96  RSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGE-NPFNLPLQTLVRFMVDIACGMEYL 153

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 68.5 bits (168), Expect = 1e-14
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 5/104 (4%)

Query: 43  FGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA- 101
           FG V  G    G  +AVK +  ++ +A  F+ E S + ++ H N+VQLLG   E      
Sbjct: 206 FGDVMLGDYR-GNKVAVKCI-KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY 263

Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           +V EYM  GSL    +           + L + +L     +EYL
Sbjct: 264 IVTEYMAKGSLVD--YLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 68.7 bits (168), Expect = 1e-14
 Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 10/109 (9%)

Query: 43  FGSVYKGQLHTGG----LIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           FG V++G   +       +A+K      S+    +F+ E  T+ +  H ++V+L+G  +E
Sbjct: 403 FGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE 462

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
            +   ++ E    G L   +   +          L   A   +  + YL
Sbjct: 463 -NPVWIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYL 507

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 67.6 bits (166), Expect = 2e-14
 Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 10/109 (9%)

Query: 43  FGSVYKGQLHTGGL----IAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           FG VY+G           +AVK    + +  +  +F++E   +  + H ++V+L+G   E
Sbjct: 25  FGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE 84

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
                ++ E  P G L  ++  N+          L   +L   + + YL
Sbjct: 85  EPTW-IIMELYPYGELGHYLERNKNS---LKVLTLVLYSLQICKAMAYL 129

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 66.9 bits (164), Expect = 3e-14
 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 12/111 (10%)

Query: 43  FGSVYKGQLHTGGL----IAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFY 94
           FG V +G+          +AVK L     +   +  +FI EV+ +  + H N+++L G  
Sbjct: 31  FGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGV- 89

Query: 95  SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
                  +V E  P GSL   +  ++G    F    L   A+  A G+ YL
Sbjct: 90  VLTPPMKMVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYL 137

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 66.1 bits (162), Expect = 5e-14
 Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 11/109 (10%)

Query: 43  FGSVYKGQLHTGGL---IAVKML---ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           FG+V KG      +   +AVK+L    N      E + E + + ++ +  +V+++G   E
Sbjct: 30  FGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI-CE 88

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
                LV E    G L++++     + +    + + E+    + G++YL
Sbjct: 89  AESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYL 133

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 65.5 bits (160), Expect = 1e-13
 Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 23/126 (18%)

Query: 43  FGSVYKGQLH--------TGGLIAVKML-ENSNFSAV-EFINEVSTIGRI-HHVNVVQLL 91
           FG V   +              +AVKML +++    + + ++E+  +  I  H N++ LL
Sbjct: 94  FGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL 153

Query: 92  GFYSEGSKRALVYEYMPNGSL------------DRHIFPNEGRGKSFSWEKLHEVALGTA 139
           G  ++     ++ EY   G+L            +     N    +  +++ L       A
Sbjct: 154 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLA 213

Query: 140 RGIEYL 145
           RG+EYL
Sbjct: 214 RGMEYL 219

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 65.1 bits (159), Expect = 2e-13
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 19/115 (16%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
           G+  FG V++ +   TG   AVK +    F       E+     +    +V L G   EG
Sbjct: 67  GRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV----EELVACAGLSSPRIVPLYGAVREG 122

Query: 98  SKRALVYEYMPNGSLDRHI-----FPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
               +  E +  GSL + I      P E R   +  + L         G+EYLH 
Sbjct: 123 PWVNIFMELLEGGSLGQLIKQMGCLP-EDRALYYLGQALE--------GLEYLHT 168

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 64.6 bits (158), Expect = 3e-13
 Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 23/126 (18%)

Query: 43  FGSVYKGQLH--------TGGLIAVKML-ENSNFSAV-EFINEVSTIGRI-HHVNVVQLL 91
           FG V   +              +AVKML +++    + + ++E+  +  I  H N++ LL
Sbjct: 48  FGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL 107

Query: 92  GFYSEGSKRALVYEYMPNGSL------------DRHIFPNEGRGKSFSWEKLHEVALGTA 139
           G  ++     ++ EY   G+L            +     N    +  +++ L       A
Sbjct: 108 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLA 167

Query: 140 RGIEYL 145
           RG+EYL
Sbjct: 168 RGMEYL 173

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 64.2 bits (157), Expect = 3e-13
 Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 19/122 (15%)

Query: 43  FGSVYKGQLHTGG------LIAVKML-ENSNFSAV-EFINEVSTIGRI-HHVNVVQLLGF 93
           FG V +      G       +AVKML   ++       ++E+  +  +  H N+V LLG 
Sbjct: 59  FGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGA 118

Query: 94  YSEGSKRALVYEYMPNGSL----------DRHIFPNEGRGKSFSWEKLHEVALGTARGIE 143
            + G    ++ EY   G L                      + S   L   +   A+G+ 
Sbjct: 119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMA 178

Query: 144 YL 145
           +L
Sbjct: 179 FL 180

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 64.2 bits (157), Expect = 4e-13
 Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 28/131 (21%)

Query: 43  FGSVYKGQLHTGG------LIAVKML-ENSNFSAV-EFINEVSTIGRIHHVNVVQLLGFY 94
           FG V K              +AVKML EN++ S + + ++E + + +++H +V++L G  
Sbjct: 36  FGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC 95

Query: 95  SEGSKRALVYEYMPNGSL--------------------DRHIFPNEGRGKSFSWEKLHEV 134
           S+     L+ EY   GSL                          +    ++ +   L   
Sbjct: 96  SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISF 155

Query: 135 ALGTARGIEYL 145
           A   ++G++YL
Sbjct: 156 AWQISQGMQYL 166

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 63.1 bits (154), Expect = 7e-13
 Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 18/138 (13%)

Query: 14  RSVDNPS--YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAV 70
           R   +P+  +E + +L           G   FG VYK +   TG L A K++E  +   +
Sbjct: 12  RRDLDPNEVWEIVGEL-----------GDGAFGKVYKAKNKETGALAAAKVIETKSEEEL 60

Query: 71  E-FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWE 129
           E +I E+  +    H  +V+LLG Y    K  ++ E+ P G++D  +       +  +  
Sbjct: 61  EDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM---LELDRGLTEP 117

Query: 130 KLHEVALGTARGIEYLHN 147
           ++  V       + +LH+
Sbjct: 118 QIQVVCRQMLEALNFLHS 135

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 63.0 bits (153), Expect = 1e-12
 Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 6/114 (5%)

Query: 38  SGKDGFGSVYKGQ-LHTGGLIAVKM--LENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGF 93
            G +   +V   +   TG  + V+   LE  +   V F+  E+      +H N+V     
Sbjct: 35  KGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRAT 94

Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           +   ++  +V  +M  GS  + +          +   +  +  G  + ++Y+H+
Sbjct: 95  FIADNELWVVTSFMAYGSA-KDLI-CTHFMDGMNELAIAYILQGVLKALDYIHH 146

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 62.7 bits (153), Expect = 1e-12
 Identities = 25/117 (21%), Positives = 40/117 (34%), Gaps = 9/117 (7%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKM--LENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
           G      V           +A+K   LE    S  E + E+  + + HH N+V     + 
Sbjct: 24  GSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFV 83

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG-----TARGIEYLHN 147
              +  LV + +  GS+   I  +           L E  +         G+EYLH 
Sbjct: 84  VKDELWLVMKLLSGGSV-LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 63.2 bits (154), Expect = 1e-12
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 23/126 (18%)

Query: 43  FGSVYKGQLH--------TGGLIAVKML-ENSNFSAV-EFINEVSTIGRI-HHVNVVQLL 91
           FG V   +              +AVKML  ++    + + I+E+  +  I  H N++ LL
Sbjct: 82  FGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLL 141

Query: 92  GFYSEGSKRALVYEYMPNGSL------------DRHIFPNEGRGKSFSWEKLHEVALGTA 139
           G  ++     ++ EY   G+L            +    P+    +  S + L   A   A
Sbjct: 142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVA 201

Query: 140 RGIEYL 145
           RG+EYL
Sbjct: 202 RGMEYL 207

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 62.4 bits (152), Expect = 1e-12
 Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 12/117 (10%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFY 94
           G+  F +VYKG    T   +A   L++   +  E   F  E   +  + H N+V+    +
Sbjct: 35  GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSW 94

Query: 95  SEGSKRA----LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
               K      LV E M +G+L  ++     R K    + L        +G+++LH 
Sbjct: 95  ESTVKGKKCIVLVTELMTSGTLKTYL----KRFKVMKIKVLRSWCRQILKGLQFLHT 147

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 62.7 bits (153), Expect = 1e-12
 Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 27/128 (21%)

Query: 43  FGSVYKGQLHTGGLI--------AVKML-ENSNFSAV-EFINEVSTIGRI-HHVNVVQLL 91
           FG V +   +  GLI        AVKML  +++ +     ++E+  +  + +H+N+V LL
Sbjct: 36  FGKVVEATAY--GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLL 93

Query: 92  GFYSEGSKRALVYEYMPNGSL--------------DRHIFPNEGRGKSFSWEKLHEVALG 137
           G  + G    ++ EY   G L                     E    +   E L   +  
Sbjct: 94  GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQ 153

Query: 138 TARGIEYL 145
            A+G+ +L
Sbjct: 154 VAKGMAFL 161

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 62.3 bits (152), Expect = 2e-12
 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 22/125 (17%)

Query: 43  FGSVYKGQLH------TGGLIAVKML-ENSNFSAV-EFINEVSTIGRI-HHVNVVQLLGF 93
           FG V +          T   +AVKML E +  S     ++E+  +  I HH+NVV LLG 
Sbjct: 40  FGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 99

Query: 94  YS-EGSKRALVYEYMPNGSL------------DRHIFPNEGRGKSFSWEKLHEVALGTAR 140
            +  G    ++ E+   G+L               + P +      + E L   +   A+
Sbjct: 100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK 159

Query: 141 GIEYL 145
           G+E+L
Sbjct: 160 GMEFL 164

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 61.9 bits (151), Expect = 2e-12
 Identities = 30/131 (22%), Positives = 51/131 (38%), Gaps = 28/131 (21%)

Query: 43  FGSVYKGQLHTGG------LIAVKML-ENSNFSAV-EFINEVSTIGRI-HHVNVVQLLGF 93
           FG V     +          +AVKML E ++ S     ++E+  + ++  H N+V LLG 
Sbjct: 58  FGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGA 117

Query: 94  YSEGSKRALVYEYMPNGSL-------------------DRHIFPNEGRGKSFSWEKLHEV 134
            +      L++EY   G L                   ++     E      ++E L   
Sbjct: 118 CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCF 177

Query: 135 ALGTARGIEYL 145
           A   A+G+E+L
Sbjct: 178 AYQVAKGMEFL 188

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 61.6 bits (150), Expect = 3e-12
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 5/114 (4%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE---FINEVSTIGRI-HHVNVVQLLGF 93
           G   FGSV+K      G + A+K  +     +V+    + EV     +  H +VV+    
Sbjct: 20  GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSA 79

Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           ++E     +  EY   GSL   I  N      F   +L ++ L   RG+ Y+H+
Sbjct: 80  WAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 133

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 61.2 bits (149), Expect = 4e-12
 Identities = 28/136 (20%), Positives = 56/136 (41%), Gaps = 21/136 (15%)

Query: 17  DNPS--YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKM--LENSNFSAVE 71
            +P   +  L K+           GK  FG V+KG    T  ++A+K+  LE +     +
Sbjct: 18  ADPEELFTKLEKI-----------GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIED 66

Query: 72  FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKL 131
              E++ + +     V +  G Y + +K  ++ EY+  GS    +             ++
Sbjct: 67  IQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA-LDLL----EPGPLDETQI 121

Query: 132 HEVALGTARGIEYLHN 147
             +     +G++YLH+
Sbjct: 122 ATILREILKGLDYLHS 137

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 61.3 bits (149), Expect = 4e-12
 Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEG 97
           G    G++    +     +AVK +    FS  +   EV  +     H NV++      + 
Sbjct: 33  GHGAEGTIVYRGMFDNRDVAVKRILPECFSFAD--REVQLLRESDEHPNVIRYFCTEKDR 90

Query: 98  SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             + +  E     +L  ++   E +  +    +   +   T  G+ +LH+
Sbjct: 91  QFQYIAIELCA-ATLQEYV---EQKDFAHLGLEPITLLQQTTSGLAHLHS 136

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 60.2 bits (146), Expect = 9e-12
 Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 17/140 (12%)

Query: 13  NRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE 71
           ++S  N  +     L           G+    +V++G+   TG L A+K+  N +F    
Sbjct: 3   SQSTSNHLWLLSDIL-----------GQGATANVFRGRHKKTGDLFAIKVFNNISFLRPV 51

Query: 72  --FINEVSTIGRIHHVNVVQLLGFYSEGSKRA--LVYEYMPNGSLDRHIFPNEGRGKSFS 127
              + E   + +++H N+V+L     E + R   L+ E+ P GSL   +           
Sbjct: 52  DVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP-SNAYGLP 110

Query: 128 WEKLHEVALGTARGIEYLHN 147
             +   V      G+ +L  
Sbjct: 111 ESEFLIVLRDVVGGMNHLRE 130

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 60.1 bits (146), Expect = 9e-12
 Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 17/131 (12%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE---FINEV 76
           Y  L+K+           G+  FG     +    G    +K +  S  S+ E      EV
Sbjct: 26  YVRLQKI-----------GEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREV 74

Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVAL 136
           + +  + H N+VQ    + E     +V +Y   G L + I  N  +G  F  +++ +  +
Sbjct: 75  AVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQEDQILDWFV 132

Query: 137 GTARGIEYLHN 147
                ++++H+
Sbjct: 133 QICLALKHVHD 143

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 60.2 bits (146), Expect = 1e-11
 Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 17/140 (12%)

Query: 13  NRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE 71
           ++S  N  +     L           G+    +V++G+   TG L A+K+  N +F    
Sbjct: 3   SQSTSNHLWLLSDIL-----------GQGATANVFRGRHKKTGDLFAIKVFNNISFLRPV 51

Query: 72  --FINEVSTIGRIHHVNVVQLLGFYSEGSKRA--LVYEYMPNGSLDRHIFPNEGRGKSFS 127
              + E   + +++H N+V+L     E + R   L+ E+ P GSL   +           
Sbjct: 52  DVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP-SNAYGLP 110

Query: 128 WEKLHEVALGTARGIEYLHN 147
             +   V      G+ +L  
Sbjct: 111 ESEFLIVLRDVVGGMNHLRE 130

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 59.6 bits (145), Expect = 1e-11
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 20/137 (14%)

Query: 15  SVDNPS--YEDLRKLLDSGLDLTWSSGKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE 71
           SV +P   Y    K+           G+   G+VY    + TG  +A++ +        E
Sbjct: 14  SVGDPKKKYTRFEKI-----------GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62

Query: 72  FI-NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEK 130
            I NE+  +    + N+V  L  Y  G +  +V EY+  GSL   +             +
Sbjct: 63  LIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQ 117

Query: 131 LHEVALGTARGIEYLHN 147
           +  V     + +E+LH+
Sbjct: 118 IAAVCRECLQALEFLHS 134

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 59.7 bits (145), Expect = 1e-11
 Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 22/140 (15%)

Query: 15  SVDNPS--YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE 71
             D+P   + DLR++           G   FG+VY  + +    ++A+K +  S   + E
Sbjct: 48  FKDDPEKLFSDLREI-----------GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE 96

Query: 72  ----FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFS 127
                I EV  + ++ H N +Q  G Y       LV EY    + D      E   K   
Sbjct: 97  KWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLL----EVHKKPLQ 152

Query: 128 WEKLHEVALGTARGIEYLHN 147
             ++  V  G  +G+ YLH+
Sbjct: 153 EVEIAAVTHGALQGLAYLHS 172

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 58.9 bits (143), Expect = 2e-11
 Identities = 30/140 (21%), Positives = 54/140 (38%), Gaps = 26/140 (18%)

Query: 15  SVDNPS--YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE 71
              +P    +   K+           G+   G V   +  H+G  +AVKM++       E
Sbjct: 39  DQGDPRLLLDSYVKI-----------GEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRE 87

Query: 72  FI-NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFS 127
            + NEV  +    H NVV++   Y  G +  ++ E++  G+L      +  NE +  +  
Sbjct: 88  LLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVC 147

Query: 128 WEKLHEVALGTARGIEYLHN 147
              L        + + YLH 
Sbjct: 148 EAVL--------QALAYLHA 159

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 58.5 bits (142), Expect = 3e-11
 Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 20/137 (14%)

Query: 15  SVDNPS--YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLE-NSNFSAV 70
               P   ++ L KL           G+  +GSVYK     TG ++A+K +   S+    
Sbjct: 23  LTKQPEEVFDVLEKL-----------GEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ-- 69

Query: 71  EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEK 130
           E I E+S + +    +VV+  G Y + +   +V EY   GS+   I     R K+ + ++
Sbjct: 70  EIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII---RLRNKTLTEDE 126

Query: 131 LHEVALGTARGIEYLHN 147
           +  +   T +G+EYLH 
Sbjct: 127 IATILQSTLKGLEYLHF 143

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 57.7 bits (140), Expect = 6e-11
 Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 33/144 (22%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFINEVSTI 79
           ++++  +           G  GFG V+K +    G    +K ++ +N  A     EV  +
Sbjct: 13  FKEIELI-----------GSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE---REVKAL 58

Query: 80  GRIHHVNVVQLLGFYSEGSKRA----------------LVYEYMPNGSLDRHIFPNEGRG 123
            ++ HVN+V   G +                       +  E+   G+L++ I   + RG
Sbjct: 59  AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRG 116

Query: 124 KSFSWEKLHEVALGTARGIEYLHN 147
           +        E+     +G++Y+H+
Sbjct: 117 EKLDKVLALELFEQITKGVDYIHS 140

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 56.6 bits (137), Expect = 2e-10
 Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 17/138 (12%)

Query: 15  SVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFI 73
            +DN  Y  ++KL           G+ GF  V   + LH G   A+K +        E  
Sbjct: 25  IIDNKHYLFIQKL-----------GEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEA 73

Query: 74  -NEVSTIGRIHHVNVVQLLG-FYSEGSKRALVY---EYMPNGSLDRHIFPNEGRGKSFSW 128
             E       +H N+++L+     E   +   +    +   G+L   I   + +G   + 
Sbjct: 74  QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE 133

Query: 129 EKLHEVALGTARGIEYLH 146
           +++  + LG  RG+E +H
Sbjct: 134 DQILWLLLGICRGLEAIH 151

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 55.0 bits (133), Expect = 5e-10
 Identities = 23/118 (19%), Positives = 52/118 (44%), Gaps = 13/118 (11%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSA----VEFINEVSTIGRIHHVNVVQLLGF 93
           G+  F  VY+   L  G  +A+K ++  +        + I E+  + +++H NV++    
Sbjct: 41  GRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYAS 100

Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFS----WEKLHEVALGTARGIEYLHN 147
           + E ++  +V E    G L R I   + + +       W+   ++       +E++H+
Sbjct: 101 FIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS----ALEHMHS 154

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 54.6 bits (131), Expect = 9e-10
 Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 16/121 (13%)

Query: 39  GKDGFGSVYKGQ------LHTGGLIAVKMLENSNFSAVE-FINEVSTIGRIHHVNVVQLL 91
           G+  F  VY+                +K+ + +N          +  +        ++  
Sbjct: 74  GEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFY 133

Query: 92  GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV-----ALGTARGIEYLH 146
             +   +   LV E    G+L   I       K+   + + +      A+     IE +H
Sbjct: 134 SAHLFQNGSVLVGELYSYGTLLNAI----NLYKNTPEKVMPQGLVISFAMRMLYMIEQVH 189

Query: 147 N 147
           +
Sbjct: 190 D 190

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 54.2 bits (131), Expect = 1e-09
 Identities = 30/133 (22%), Positives = 50/133 (37%), Gaps = 20/133 (15%)

Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE---FINE 75
           S++ L +L           G   +G V+K +    G L AVK   +      +    + E
Sbjct: 58  SFQRLSRL-----------GHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAE 106

Query: 76  VSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
           V +  ++  H   V+L   + EG    L  E     SL +H    E  G S    ++   
Sbjct: 107 VGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHC---EAWGASLPEAQVWGY 162

Query: 135 ALGTARGIEYLHN 147
              T   + +LH+
Sbjct: 163 LRDTLLALAHLHS 175

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 53.9 bits (130), Expect = 1e-09
 Identities = 31/143 (21%), Positives = 62/143 (43%), Gaps = 23/143 (16%)

Query: 15  SVDNPS--YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE 71
           ++ +P+  +E +  +           G   +G VYKG+ + TG L A+K+++ +     E
Sbjct: 18  ALRDPAGIFELVELV-----------GNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEE 66

Query: 72  FINEVSTIGRI-HHVNVVQLLGFYSEGSKRA------LVYEYMPNGSLDRHIFPNEGRGK 124
              E++ + +  HH N+    G + + +         LV E+   GS+   I     +G 
Sbjct: 67  IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGN 124

Query: 125 SFSWEKLHEVALGTARGIEYLHN 147
           +   E +  +     RG+ +LH 
Sbjct: 125 TLKEEWIAYICREILRGLSHLHQ 147

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 53.1 bits (128), Expect = 2e-09
 Identities = 25/143 (17%), Positives = 50/143 (34%), Gaps = 32/143 (22%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFINEVSTI 79
           +E++  L           G+  FG V K +        A+K + ++       ++EV  +
Sbjct: 8   FEEIAVL-----------GQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLL 56

Query: 80  GRIHHVNVVQLLGFYSEGSKRA-------------LVYEYMPNGSLDRHIFPNEGRGKS- 125
             ++H  VV+    + E                  +  EY  NG+L   I  +E   +  
Sbjct: 57  ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI-HSENLNQQR 115

Query: 126 -FSWEKLHEVALGTARGIEYLHN 147
              W    ++       + Y+H+
Sbjct: 116 DEYWRLFRQILE----ALSYIHS 134

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 53.1 bits (128), Expect = 3e-09
 Identities = 24/145 (16%), Positives = 52/145 (35%), Gaps = 33/145 (22%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKM--LENSNFSAVEFINEVS 77
           +E ++ L           G+ GFG V++ +        A+K   L N   +  + + EV 
Sbjct: 7   FEPIQCL-----------GRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVK 55

Query: 78  TIGRIHHVNVVQLLGFYSEG---------SKRALVY---EYMPNGSLDRHIFPNEGRG-- 123
            + ++ H  +V+    + E          S +  +Y   +     +L   +         
Sbjct: 56  ALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER 115

Query: 124 -KSFSWEKLHEVALGTARGIEYLHN 147
            +S       ++A      +E+LH+
Sbjct: 116 ERSVCLHIFLQIAE----AVEFLHS 136

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 53.0 bits (128), Expect = 3e-09
 Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 17/132 (12%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE---FINEV 76
           YE L  +           G   +G   K +    G ++  K L+  + +  E    ++EV
Sbjct: 8   YEVLYTI-----------GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEV 56

Query: 77  STIGRIHHVNVVQLLGFYSEGSKRAL--VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
           + +  + H N+V+      + +   L  V EY   G L   I       +    E +  V
Sbjct: 57  NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 116

Query: 135 ALGTARGIEYLH 146
                  ++  H
Sbjct: 117 MTQLTLALKECH 128

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 52.8 bits (127), Expect = 3e-09
 Identities = 22/138 (15%), Positives = 50/138 (36%), Gaps = 21/138 (15%)

Query: 15  SVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKM--LENSNFSAVE- 71
           SV    Y  L+++           G  G   V++       + A+K   LE ++   ++ 
Sbjct: 5   SVKGRIYSILKQI-----------GSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS 53

Query: 72  FINEVSTIGRI--HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWE 129
           + NE++ + ++  H   +++L  +        +V E   N  L+  +     + KS    
Sbjct: 54  YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWL----KKKKSIDPW 108

Query: 130 KLHEVALGTARGIEYLHN 147
           +           +  +H 
Sbjct: 109 ERKSYWKNMLEAVHTIHQ 126

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 52.2 bits (126), Expect = 5e-09
 Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 19/118 (16%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
           GK  FG+VY  +   +  ++A+K+L  +             EV     + H N+++L G+
Sbjct: 18  GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77

Query: 94  YSEGSKRALVYEYMPNGSLDRHI-----FPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
           + + ++  L+ EY P G++ R +     F  E R  ++    + E+A      + Y H
Sbjct: 78  FHDATRVYLILEYAPLGTVYRELQKLSKFD-EQRTATY----ITELAN----ALSYCH 126

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 52.3 bits (126), Expect = 6e-09
 Identities = 16/114 (14%), Positives = 38/114 (33%), Gaps = 10/114 (8%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRI--HHVNVVQLLGF 93
           G  G   V++       + A+K +            + NE++ + ++  H   +++L  +
Sbjct: 37  GSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 96

Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                   +V E   N  L+  +     + KS    +           +  +H 
Sbjct: 97  EITDQYIYMVMECG-NIDLNSWL----KKKKSIDPWERKSYWKNMLEAVHTIHQ 145

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 51.9 bits (125), Expect = 8e-09
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 34/143 (23%)

Query: 14  RSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKM--LENS----N 66
            S+D   Y  + KL           G+  +G VYK     T   +A+K   LE+      
Sbjct: 31  TSIDR--YRRITKL-----------GEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVP 77

Query: 67  FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN---GSLDRHIFPNEGRG 123
            +A   I EVS +  + H N+++L        +  L++EY  N     +D++   +    
Sbjct: 78  GTA---IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVI 134

Query: 124 KSFSWEKLHEVALGTARGIEYLH 146
           KSF ++ +         G+ + H
Sbjct: 135 KSFLYQLI--------NGVNFCH 149

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 52.0 bits (124), Expect = 9e-09
 Identities = 28/126 (22%), Positives = 41/126 (32%), Gaps = 26/126 (20%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE--FINEVSTIGRIHHVNVVQLLGFYS 95
           G  GFG V +     TG  +A+K             +  E+  + +++H NVV       
Sbjct: 23  GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPD 82

Query: 96  EGSKRA------LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTAR--------G 141
              K A      L  EY   G L +++   E          L E      R         
Sbjct: 83  GLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC------GLKEG---PIRTLLSDISSA 133

Query: 142 IEYLHN 147
           + YLH 
Sbjct: 134 LRYLHE 139

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 51.8 bits (125), Expect = 9e-09
 Identities = 31/150 (20%), Positives = 58/150 (38%), Gaps = 38/150 (25%)

Query: 12  LNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKM--LENS--- 65
           +        YE L  L           G+  F +VYK +  +T  ++A+K   L +    
Sbjct: 5   VKSRAKR--YEKLDFL-----------GEGQFATVYKARDKNTNQIVAIKKIKLGHRSEA 51

Query: 66  ----NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN---GSLDRHIFP 118
               N +A   + E+  +  + H N++ LL  +   S  +LV+++M       +  +   
Sbjct: 52  KDGINRTA---LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLV 108

Query: 119 -NEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                 K++    L        +G+EYLH 
Sbjct: 109 LTPSHIKAYMLMTL--------QGLEYLHQ 130

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 45/161 (27%)

Query: 5   ISKVLVVLNRSVDNP--SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVK-- 60
           + KVL    ++ +    +Y + + +           G   FG V++ +L     +A+K  
Sbjct: 24  VIKVLASDGKTGEQREIAYTNCKVI-----------GNGSFGVVFQAKLVESDEVAIKKV 72

Query: 61  MLENSNFSAVEFIN-EVSTIGRIHHVNVVQLLG-FYSEGSKRA-----LVYEYMPNGSLD 113
           + +        F N E+  +  + H NVV L   FYS G K+      LV EY+P  ++ 
Sbjct: 73  LQDK------RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVY 125

Query: 114 RHI--FPNEGRG------KSFSWEKLHEVALGTARGIEYLH 146
           R    +    +       K + ++ L        R + Y+H
Sbjct: 126 RASRHYAKLKQTMPMLLIKLYMYQLL--------RSLAYIH 158

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 50.6 bits (122), Expect = 2e-08
 Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 18/118 (15%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQLLGF 93
           GK  F  VY+ + +HTG  +A+KM++              NEV    ++ H ++++L  +
Sbjct: 20  GKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY 79

Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEK-----LHEVALGTARGIEYLH 146
           + + +   LV E   NG ++R++   + R K FS E      +H++      G+ YLH
Sbjct: 80  FEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFS-ENEARHFMHQI----ITGMLYLH 129

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 50.6 bits (121), Expect = 2e-08
 Identities = 15/114 (13%), Positives = 37/114 (32%), Gaps = 10/114 (8%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHH--VNVVQLLGF 93
           G  G   V++       + A+K +            + NE++ + ++      +++L  +
Sbjct: 65  GSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 124

Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                   +V E   N  L+  +     + KS    +           +  +H 
Sbjct: 125 EITDQYIYMVMEC-GNIDLNSWL----KKKKSIDPWERKSYWKNMLEAVHTIHQ 173

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 26/119 (21%)

Query: 43  FGSVYKGQ-LHTGGLIAVKM--LENS---NFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           + +VYKG    TG  +A+K   L++      +A   I E+S +  + H N+V+L      
Sbjct: 18  YATVYKGLNKTTGVYVALKEVKLDSEEGTPSTA---IREISLMKELKHENIVRLYDVIHT 74

Query: 97  GSKRALVYEYMPN---GSLDRHIFPNEGRG------KSFSWEKLHEVALGTARGIEYLH 146
            +K  LV+E+M N     +D     N  RG      K F W+ L        +G+ + H
Sbjct: 75  ENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL--------QGLAFCH 125

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 50.1 bits (120), Expect = 3e-08
 Identities = 21/131 (16%), Positives = 40/131 (30%), Gaps = 23/131 (17%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFI------------------NEVSTIG 80
            +  F  +   +       A+K  E S                          NE+  I 
Sbjct: 40  NQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIIT 98

Query: 81  RIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTAR 140
            I +   +   G  +   +  ++YEYM N S+ +         K+++     +V     +
Sbjct: 99  DIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIK 158

Query: 141 ----GIEYLHN 147
                  Y+HN
Sbjct: 159 SVLNSFSYIHN 169

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 22/113 (19%), Positives = 49/113 (43%), Gaps = 5/113 (4%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKM--LENSNFSAVEFINEVSTIGR-IHHVNVVQLLGFY 94
           G+  +G V K + + +G ++AVK      ++      + ++    R +     V   G  
Sbjct: 16  GRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGAL 75

Query: 95  SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                  +  E M + SLD+       +G++   + L ++A+   + +E+LH+
Sbjct: 76  FREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 127

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 49.4 bits (119), Expect = 4e-08
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 21/114 (18%)

Query: 43  FGSVYKGQLHTGGLIAVKM--LENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           +G VYK Q + G   A+K   LE        +    I E+S +  + H N+V+L      
Sbjct: 15  YGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT---IREISILKELKHSNIVKLYDVIHT 71

Query: 97  GSKRALVYEYMPN---GSLDRHIFP-NEGRGKSFSWEKLHEVALGTARGIEYLH 146
             +  LV+E++       LD           KSF  + L         GI Y H
Sbjct: 72  KKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLL--------NGIAYCH 117

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 49.5 bits (119), Expect = 4e-08
 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 21/114 (18%)

Query: 43  FGSVYKGQLHTGGLIAVKM--LENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
           +G VYK +   G ++A+K   L+        +A   I E+S +  +HH N+V L+     
Sbjct: 34  YGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA---IREISLLKELHHPNIVSLIDVIHS 90

Query: 97  GSKRALVYEYMPN---GSLDRHIFP-NEGRGKSFSWEKLHEVALGTARGIEYLH 146
                LV+E+M       LD +     + + K + ++ L        RG+ + H
Sbjct: 91  ERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLL--------RGVAHCH 136

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 49.5 bits (118), Expect = 5e-08
 Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 39  GKDGFGSVYKGQL-HTGGLIAVKM--LENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
           G    G V+K     +G ++A K+  LE       + I E+  +   +   +V   G + 
Sbjct: 42  GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY 101

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              + ++  E+M  GSLD+ +     +      + L +V++   +G+ YL  
Sbjct: 102 SDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLRE 149

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 49.3 bits (118), Expect = 7e-08
 Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 45/162 (27%)

Query: 5   ISKVLVVLNRSVDNP---SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVK 60
           ++ V+    +  D P   SY D + +           G   FG VY+ +L  +G L+A+K
Sbjct: 37  VTTVVATPGQGPDRPQEVSYTDTKVI-----------GNGSFGVVYQAKLCDSGELVAIK 85

Query: 61  -MLENSNFSAVEFIN-EVSTIGRIHHVNVVQLLG-FYSEGSKRA-----LVYEYMPNGSL 112
            +L++       F N E+  + ++ H N+V+L   FYS G K+      LV +Y+P  ++
Sbjct: 86  KVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TV 139

Query: 113 DRHI--FPNEGRG------KSFSWEKLHEVALGTARGIEYLH 146
            R    +    +       K + ++          R + Y+H
Sbjct: 140 YRVARHYSRAKQTLPVIYVKLYMYQLF--------RSLAYIH 173

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 48.7 bits (117), Expect = 9e-08
 Identities = 28/122 (22%), Positives = 41/122 (33%), Gaps = 25/122 (20%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQLLGF 93
           GK GF   ++     T  + A K++  S             E+S    + H +VV   GF
Sbjct: 24  GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 83

Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTAR--------GIEYL 145
           + +     +V E     SL       + R        L E     AR        G +YL
Sbjct: 84  FEDNDFVFVVLELCRRRSLLELH---KRRK------ALTE---PEARYYLRQIVLGCQYL 131

Query: 146 HN 147
           H 
Sbjct: 132 HR 133

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 19/119 (15%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
           GK  FG+VY  +      ++A+K+L  S             E+     + H N++++  +
Sbjct: 23  GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNY 82

Query: 94  YSEGSKRALVYEYMPNGSLDRHI-----FPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           + +  +  L+ E+ P G L + +     F  E R  +F  E         A  + Y H 
Sbjct: 83  FHDRKRIYLMLEFAPRGELYKELQKHGRFD-EQRSATFMEE--------LADALHYCHE 132

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 26/140 (18%), Positives = 49/140 (35%), Gaps = 12/140 (8%)

Query: 13  NRSVDNPSYE-DLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE 71
           +R  + P++E  L+ L+ S   L    G    G+V       G  +AVK +         
Sbjct: 1   SRIANIPNFEQSLKNLVVSEKIL----GYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL 56

Query: 72  FINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHI---FPNEGRGKSFS 127
              E+  +     H NV++     +      +  E   N +L   +     ++   K   
Sbjct: 57  --MEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQK 113

Query: 128 WEKLHEVALGTARGIEYLHN 147
                 +    A G+ +LH+
Sbjct: 114 EYNPISLLRQIASGVAHLHS 133

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 48.3 bits (116), Expect = 1e-07
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 27/134 (20%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVK-MLENSNFSAVEFIN--EV 76
           YE + K+           G+  +G V+K +   TG ++A+K  LE+ +   ++ I   E+
Sbjct: 5   YEKIGKI-----------GEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREI 53

Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN---GSLDRH-IFPNEGRGKSFSWEKLH 132
             + ++ H N+V LL  +    +  LV+EY  +     LDR+     E   KS +W+ L 
Sbjct: 54  RMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTL- 112

Query: 133 EVALGTARGIEYLH 146
                  + + + H
Sbjct: 113 -------QAVNFCH 119

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 5/83 (6%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQLLGF 93
           GK GF   ++     T  + A K++  S             E+S    + H +VV   GF
Sbjct: 50  GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 109

Query: 94  YSEGSKRALVYEYMPNGSLDRHI 116
           + +     +V E     SL    
Sbjct: 110 FEDNDFVFVVLELCRRRSLLELH 132

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 6/114 (5%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKM--LENSNFSAVEFINEVSTIGR-IHHVNVVQLLGFY 94
           G+  +GSV K     +G ++AVK            + + ++  + R      +VQ  G  
Sbjct: 31  GRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGAL 90

Query: 95  SEGSKRALVYEYMPNGSLDRHI-FPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                  +  E M + S D+   +           E L ++ L T + + +L  
Sbjct: 91  FREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE 143

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 48.3 bits (115), Expect = 1e-07
 Identities = 25/122 (20%), Positives = 46/122 (37%), Gaps = 26/122 (21%)

Query: 43  FGSVYKGQ---LHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSK 99
           +G VYK +          A+K +E +  S +    E++ +  + H NV+ L   +   + 
Sbjct: 34  YGHVYKAKRKDGKDDKDYALKQIEGTGIS-MSACREIALLRELKHPNVISLQKVFLSHAD 92

Query: 100 RA--LVYEYMPN---GSLDRHIFPNEGRG---------KSFSWEKLHEVALGTARGIEYL 145
           R   L+++Y  +     +  H      +          KS  ++ L         GI YL
Sbjct: 93  RKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL--------DGIHYL 144

Query: 146 HN 147
           H 
Sbjct: 145 HA 146

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 30/152 (19%)

Query: 11  VLNRSVDNPSYED---LRKLLDSGLDLTWSSGKDGFGSVYKG-QLHTGGLIAVKMLENSN 66
           +L+ + D+  +ED   L +++          GK  F  V +     TG   AVK+++ + 
Sbjct: 12  ILDMADDDVLFEDVYELCEVI----------GKGPFSVVRRCINRETGQQFAVKIVDVAK 61

Query: 67  FSAVEFI------NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL-DRHIFPN 119
           F++   +       E S    + H ++V+LL  YS      +V+E+M    L    I   
Sbjct: 62  FTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFE-IVKR 120

Query: 120 EGRGKSFSWEKLHEVALGTAR----GIEYLHN 147
              G  +S E    VA    R     + Y H+
Sbjct: 121 ADAGFVYS-EA---VASHYMRQILEALRYCHD 148

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 7/112 (6%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE-FINEVSTIGRI-HHVNVVQLLGFYS 95
           G+     V     L T    AVK++E            EV  + +   H NV++L+ F+ 
Sbjct: 22  GEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFE 81

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           E  +  LV+E M  GS+  HI     + + F+  +   V    A  +++LHN
Sbjct: 82  EEDRFYLVFEKMRGGSILSHIH----KRRHFNELEASVVVQDVASALDFLHN 129

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 15/116 (12%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSE 96
           G   FG V+K  +  TG  +A K+++       E + NE+S + ++ H N++QL   +  
Sbjct: 98  GGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES 157

Query: 97  GSKRALVYEYMPNGSL-DRHIFPNEGRGKSFSWEKLHEVALGTAR----GIEYLHN 147
            +   LV EY+  G L DR I        + + E      +   +    GI ++H 
Sbjct: 158 KNDIVLVMEYVDGGELFDRII----DESYNLT-EL---DTILFMKQICEGIRHMHQ 205

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 22/115 (19%)

Query: 43  FGSVYKGQ-LHTGGLIAVKM--LENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
           +G+V+K +   T  ++A+K   L++       SA   + E+  +  + H N+V+L     
Sbjct: 15  YGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA---LREICLLKELKHKNIVRLHDVLH 71

Query: 96  EGSKRALVYEYMPN---GSLDRHIFP-NEGRGKSFSWEKLHEVALGTARGIEYLH 146
              K  LV+E+         D      +    KSF ++ L        +G+ + H
Sbjct: 72  SDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLL--------KGLGFCH 118

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 5/81 (6%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFY 94
           GK  F  V +     TG   A K++     SA +      E     ++ H N+V+L    
Sbjct: 38  GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI 97

Query: 95  SEGSKRALVYEYMPNGSL-DR 114
            E S   LV++ +  G L + 
Sbjct: 98  QEESFHYLVFDLVTGGELFED 118

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 23/116 (19%)

Query: 43  FGSVYKGQ-LHTGGLIAVKM--LENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
           +G VYK +   TG ++A+K   L+        +A   I E+S +  ++H N+V+LL    
Sbjct: 16  YGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNIVKLLDVIH 72

Query: 96  EGSKRALVYEYMPN---GSLDRHIFP--NEGRGKSFSWEKLHEVALGTARGIEYLH 146
             +K  LV+E++       +D            KS+ ++ L        +G+ + H
Sbjct: 73  TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--------QGLAFCH 120

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 5/81 (6%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFY 94
           GK  F  V +  ++  G   A  ++     SA +      E      + H N+V+L    
Sbjct: 20  GKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI 79

Query: 95  SEGSKRALVYEYMPNGSL-DR 114
           SE     L+++ +  G L + 
Sbjct: 80  SEEGHHYLIFDLVTGGELFED 100

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 47.4 bits (113), Expect = 3e-07
 Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 5/81 (6%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFY 94
           G   +G V       T    A+K++  ++ S       + EV+ +  + H N+++L  F+
Sbjct: 46  GSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF 105

Query: 95  SEGSKRALVYEYMPNGSL-DR 114
            +     LV E    G L D 
Sbjct: 106 EDKRNYYLVMECYKGGELFDE 126

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 32/137 (23%)

Query: 20  SYEDLRKLLDSGLDLTWSSGKDGFGSVYKG-QLHTGGLIAVKM--LENS---NFSAVEFI 73
           +Y  L KL           G+  + +VYKG    T  L+A+K   LE+      +A   I
Sbjct: 3   TYIKLDKL-----------GEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTA---I 48

Query: 74  NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN---GSLDRHIFP-NEGRGKSFSWE 129
            EVS +  + H N+V L           LV+EY+       LD      N    K F ++
Sbjct: 49  REVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQ 108

Query: 130 KLHEVALGTARGIEYLH 146
            L        RG+ Y H
Sbjct: 109 LL--------RGLAYCH 117

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 5/113 (4%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE--FINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG V+   +  +G    +K +              E+  +  + H N++++   + 
Sbjct: 31  GSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFE 90

Query: 96  EGSKRALVYEYMPNGSL-DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           +     +V E    G L +R I   + RGK+ S   + E+       + Y H+
Sbjct: 91  DYHNMYIVMETCEGGELLER-IVSAQARGKALSEGYVAELMKQMMNALAYFHS 142

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 47.0 bits (112), Expect = 4e-07
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 6/82 (7%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQLLGF 93
           GK  FG V       TG   AVK++              + EV  + ++ H N+++L  F
Sbjct: 35  GKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF 94

Query: 94  YSEGSKRALVYEYMPNGSL-DR 114
           + +     LV E    G L D 
Sbjct: 95  FEDKGYFYLVGEVYTGGELFDE 116

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 47.1 bits (112), Expect = 4e-07
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 3/79 (3%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSE 96
           G   FG V++  +  TG   A K +   + S  E +  E+ T+  + H  +V L   + +
Sbjct: 166 GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED 225

Query: 97  GSKRALVYEYMPNGSL-DR 114
            ++  ++YE+M  G L ++
Sbjct: 226 DNEMVMIYEFMSGGELFEK 244

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 46.8 bits (112), Expect = 5e-07
 Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 29/141 (20%)

Query: 14  RSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVK-MLENSNFSAVE 71
           +S++   YE+L  +           G+  +G V K +   TG ++A+K  LE+ +   V+
Sbjct: 22  QSMEK--YENLGLV-----------GEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVK 68

Query: 72  FIN--EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN---GSLDRHIFP-NEGRGKS 125
            I   E+  + ++ H N+V LL    +  +  LV+E++ +     L+      +    + 
Sbjct: 69  KIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQK 128

Query: 126 FSWEKLHEVALGTARGIEYLH 146
           + ++ +         GI + H
Sbjct: 129 YLFQII--------NGIGFCH 141

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 46.5 bits (111), Expect = 5e-07
 Identities = 16/115 (13%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
           G+  FG V++  +  +      K ++      V    E+S +    H N++ L   +   
Sbjct: 14  GRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESM 73

Query: 98  SKRALVYEYMPNGSL-DRHIFPNEGRGKSFSWEKLHEVALGTAR----GIEYLHN 147
            +  +++E++    + +R            + E+     +         +++LH+
Sbjct: 74  EELVMIFEFISGLDIFERIN----TSAFELN-ER---EIVSYVHQVCEALQFLHS 120

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 46.0 bits (110), Expect = 6e-07
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 3/79 (3%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE-FINEVSTIGRIHHVNVVQLLGFYSE 96
           G+  +G V    Q  T    A K +       V+ F  E+  +  + H N+++L   + +
Sbjct: 18  GRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED 77

Query: 97  GSKRALVYEYMPNGSL-DR 114
            +   LV E    G L +R
Sbjct: 78  NTDIYLVMELCTGGELFER 96

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 46.2 bits (110), Expect = 7e-07
 Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 15/115 (13%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSE 96
           G   FG V++  +  TG +   K +          + NE+S + ++HH  ++ L   + +
Sbjct: 60  GSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED 119

Query: 97  GSKRALVYEYMPNGSL-DRHIFPNEGRGKSFSWEKLHEVALGTAR----GIEYLH 146
             +  L+ E++  G L DR            S E      +   R    G++++H
Sbjct: 120 KYEMVLILEFLSGGELFDRIA----AEDYKMS-EA---EVINYMRQACEGLKHMH 166

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 46.2 bits (110), Expect = 7e-07
 Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 9/85 (10%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE-------FINEVSTIGRIHHVNVVQL 90
           G   F  V K  +  TG   A K ++     A            EVS + ++ H N++ L
Sbjct: 21  GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITL 80

Query: 91  LGFYSEGSKRALVYEYMPNGSL-DR 114
              Y   +   L+ E +  G L D 
Sbjct: 81  HDVYENRTDVVLILELVSGGELFDF 105

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 46.0 bits (110), Expect = 8e-07
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 5/81 (6%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFY 94
           GK  F  V +     TG   A K++     SA +      E     ++ H N+V+L    
Sbjct: 15  GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI 74

Query: 95  SEGSKRALVYEYMPNGSL-DR 114
            E S   LV++ +  G L + 
Sbjct: 75  QEESFHYLVFDLVTGGELFED 95

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSE 96
           G+  F    K     +    AVK++     +  +   E++ +     H N+V+L   + +
Sbjct: 20  GEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ--KEITALKLCEGHPNIVKLHEVFHD 77

Query: 97  GSKRALVYEYMPNGSL-DR 114
                LV E +  G L +R
Sbjct: 78  QLHTFLVMELLNGGELFER 96

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 45.3 bits (108), Expect = 1e-06
 Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 9/85 (10%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE-------FINEVSTIGRIHHVNVVQL 90
           G   F  V K  +  TG   A K ++     A            EVS + ++ H NV+ L
Sbjct: 21  GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITL 80

Query: 91  LGFYSEGSKRALVYEYMPNGSL-DR 114
              Y   +   L+ E +  G L D 
Sbjct: 81  HDVYENRTDVVLILELVSGGELFDF 105

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 5/81 (6%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFY 94
           GK  FG V K     T    AVK++  ++    +    + EV  + ++ H N+++L    
Sbjct: 31  GKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL 90

Query: 95  SEGSKRALVYEYMPNGSL-DR 114
            + S   +V E    G L D 
Sbjct: 91  EDSSSFYIVGELYTGGELFDE 111

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 44.8 bits (106), Expect = 2e-06
 Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 8/84 (9%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE------FINEVSTIGRIHHVNVVQLL 91
           G+  +G V    +  T  + A+K++  +    +          EV  + ++HH N+ +L 
Sbjct: 35  GQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLY 94

Query: 92  GFYSEGSKRALVYEYMPNGSL-DR 114
             Y +     LV E    G L D+
Sbjct: 95  EVYEDEQYICLVMELCHGGHLLDK 118

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 3/79 (3%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSE 96
           G   F  V+   Q  TG L A+K ++ S       + NE++ + +I H N+V L   Y  
Sbjct: 18  GSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES 77

Query: 97  GSKRALVYEYMPNGSL-DR 114
            +   LV + +  G L DR
Sbjct: 78  TTHYYLVMQLVSGGELFDR 96

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 44.5 bits (105), Expect = 3e-06
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)

Query: 43  FGSVYKGQLH------TGGLIAVKML-ENSNFSAV-EFINEVSTIGRI-HHVNVVQLLGF 93
           FG V +          T   +AVKML E +  S     ++E+  +  I HH+NVV LLG 
Sbjct: 35  FGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 94

Query: 94  YSEGSKRALV-YEYMPNGSLDRHI 116
            ++     +V  E+   G+L  ++
Sbjct: 95  CTKPGGPLMVIVEFCKFGNLSTYL 118

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 44.5 bits (106), Expect = 3e-06
 Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 23/120 (19%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNF-SAVEFIN-EVSTIGRIHHVNVVQLLGFYS 95
           G+  +G V       T   +AVK+++        E I  E+     ++H NVV+  G   
Sbjct: 16  GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR 75

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTAR--------GIEYLHN 147
           EG+ + L  EY   G L   I P+           + E     A+        G+ YLH 
Sbjct: 76  EGNIQYLFLEYCSGGELFDRIEPD-IG--------MPE---PDAQRFFHQLMAGVVYLHG 123

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 43.8 bits (104), Expect = 4e-06
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 5/81 (6%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFY 94
           GK  FG V K     T    AVK++  ++    +    + EV  + ++ H N+++L    
Sbjct: 31  GKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL 90

Query: 95  SEGSKRALVYEYMPNGSL-DR 114
            + S   +V E    G L D 
Sbjct: 91  EDSSSFYIVGELYTGGELFDE 111

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 43.9 bits (104), Expect = 4e-06
 Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 8/113 (7%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKM--LENSNFSAVEFINEVSTIGR-IHHVNVVQLLGFY 94
           G    G V+K +   TG +IAVK      +       + ++  + +      +VQ  G +
Sbjct: 34  GSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTF 93

Query: 95  SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              +   +  E M   +                   L ++ +   + + YL  
Sbjct: 94  ITNTDVFIAMELMGTCAEKLKKR----MQGPIPERILGKMTVAIVKALYYLKE 142

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 23/120 (19%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNF-SAVEFIN-EVSTIGRIHHVNVVQLLGFYS 95
           G+  +G V       T   +AVK+++        E I  E+     ++H NVV+  G   
Sbjct: 16  GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR 75

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTAR--------GIEYLHN 147
           EG+ + L  EY   G L   I P+           + E     A+        G+ YLH 
Sbjct: 76  EGNIQYLFLEYCSGGELFDRIEPD-IG--------MPE---PDAQRFFHQLMAGVVYLHG 123

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 11/112 (9%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFINEVSTIGR-IHHVNVVQLLGFYSE 96
           G   +    +     T    AVK+++ S     E   E+  + R   H N++ L   Y +
Sbjct: 31  GVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE---EIEILLRYGQHPNIITLKDVYDD 87

Query: 97  GSKRALVYEYMPNGSL-DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           G    +V E M  G L D+ +     R K FS  +   V     + +EYLH 
Sbjct: 88  GKYVYVVTELMKGGELLDKIL-----RQKFFSEREASAVLFTITKTVEYLHA 134

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 9/85 (10%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE-------FINEVSTIGRIHHVNVVQL 90
           G   F  V K  Q  TG   A K ++    S+            EV+ +  I H N++ L
Sbjct: 14  GSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITL 73

Query: 91  LGFYSEGSKRALVYEYMPNGSL-DR 114
              +   +   L+ E +  G L D 
Sbjct: 74  HDIFENKTDVVLILELVSGGELFDF 98

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 43.1 bits (102), Expect = 8e-06
 Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 12/87 (13%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE---------FINEVSTIGRIHHVNVV 88
           G    G V    +  T   +A++++    F+               E+  + +++H  ++
Sbjct: 144 GSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII 203

Query: 89  QLLGFYSEGSKRALVYEYMPNGSL-DR 114
           ++  F+ +     +V E M  G L D+
Sbjct: 204 KIKNFF-DAEDYYIVLELMEGGELFDK 229

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 43.0 bits (102), Expect = 9e-06
 Identities = 33/153 (21%), Positives = 55/153 (35%), Gaps = 43/153 (28%)

Query: 14  RSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKM--LENS----N 66
             V    YE L K+           G+  FG V+K +   TG  +A+K   +EN      
Sbjct: 14  DEVSK--YEKLAKI-----------GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFP 60

Query: 67  FSAVEFINEVSTIGRIHHVNVVQLLG-FYSEGSKRA-------LVYEYMPN---GSLDRH 115
            +A   + E+  +  + H NVV L+    ++ S          LV+++  +   G L   
Sbjct: 61  ITA---LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV 117

Query: 116 IFP-NEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           +        K      L         G+ Y+H 
Sbjct: 118 LVKFTLSEIKRVMQMLL--------NGLYYIHR 142

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 34/164 (20%), Positives = 61/164 (37%), Gaps = 41/164 (25%)

Query: 4   FISKVLVVLNRSVDNP---SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAV 59
            +S                 ++  R             G+  FG+V  G+   TG  +A+
Sbjct: 5   MMSLNAAAAADERSRKEMDRFQVERMA-----------GQGTFGTVQLGKEKSTGMSVAI 53

Query: 60  K-MLENSNFSAVEFINEVSTIGRIHHVNVVQLL-GFYSEGSKR------ALVYEYMPNGS 111
           K ++++  F   E +  +  +  +HH N+VQL   FY+ G +        +V EY+P+ +
Sbjct: 54  KKVIQDPRFRNRE-LQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-T 111

Query: 112 LDRHI--FPNEGRG------KSFSWEKLHEVALGTARGIEYLHN 147
           L R    +            K F ++ +        R I  LH 
Sbjct: 112 LHRCCRNYYRRQVAPPPILIKVFLFQLI--------RSIGCLHL 147

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 9/85 (10%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE-------FINEVSTIGRIHHVNVVQL 90
           G   F  V K  +  TG   A K ++     +            EVS +  I H NV+ L
Sbjct: 20  GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79

Query: 91  LGFYSEGSKRALVYEYMPNGSL-DR 114
              Y   +   L+ E +  G L D 
Sbjct: 80  HEVYENKTDVILILELVAGGELFDF 104

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 9/105 (8%)

Query: 13  NRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKG-QLHTGGLIAVKMLE-NSNFSAV 70
           +  +D  + + L    +   +L    G+     VY+  Q  T    A+K+L+   +   V
Sbjct: 40  DYWIDGSNRDALSDFFEVESEL----GRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV 95

Query: 71  EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL-DR 114
               E+  + R+ H N+++L   +   ++ +LV E +  G L DR
Sbjct: 96  R--TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDR 138

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 6/82 (7%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAV---EFINEVSTIGRI-HHVNVVQLLGF 93
           G+  F  V +     TG   A K L+          E ++E++ +        V+ L   
Sbjct: 38  GRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97

Query: 94  YSEGSKRALVYEYMPNGSL-DR 114
           Y   S+  L+ EY   G +   
Sbjct: 98  YENTSEIILILEYAAGGEIFSL 119

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 16/92 (17%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE--------------FINEVSTIGRIH 83
           G   +G V    + +     A+K+++ S F                    NE+S +  + 
Sbjct: 45  GSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD 104

Query: 84  HVNVVQLLGFYSEGSKRALVYEYMPNGSL-DR 114
           H N+++L   + +     LV E+   G L ++
Sbjct: 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQ 136

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 40.4 bits (95), Expect = 6e-05
 Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 12/87 (13%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE---------FINEVSTIGRIHHVNVV 88
           G    G V    +  T   +A+K++    F+               E+  + +++H  ++
Sbjct: 19  GSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII 78

Query: 89  QLLGFYSEGSKRALVYEYMPNGSL-DR 114
           ++  F+ +     +V E M  G L D+
Sbjct: 79  KIKNFF-DAEDYYIVLELMEGGELFDK 104

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 24/121 (19%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFIN---EVSTIGRIHHVNVVQLLGFY 94
           GK  F  V   + + TG  +A+K+++ +  +         EV  +  ++H N+V+L    
Sbjct: 24  GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI 83

Query: 95  SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTAR--------GIEYLH 146
                  L+ EY   G +  ++    GR        + E     AR         ++Y H
Sbjct: 84  ETEKTLYLIMEYASGGEVFDYLV-AHGR--------MKE---KEARSKFRQIVSAVQYCH 131

Query: 147 N 147
            
Sbjct: 132 Q 132

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 22/133 (16%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFINEVSTI 79
           Y+   ++L          G    G V +     T    A+KML++      +   EV   
Sbjct: 63  YKVTSQVL----------GLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVELH 108

Query: 80  GRI-HHVNVVQLLGFYSEGSKRA----LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
            R     ++V+++  Y           +V E +  G L   I   +   ++F+  +  E+
Sbjct: 109 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ--DRGDQAFTEREASEI 166

Query: 135 ALGTARGIEYLHN 147
                  I+YLH+
Sbjct: 167 MKSIGEAIQYLHS 179

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 12/84 (14%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFINEVSTIGR-----------IHHVN 86
           GK GFG+V+ G  L     +A+K++  +       +++  T                H  
Sbjct: 40  GKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPG 99

Query: 87  VVQLLGFYSEGSKRALVYEYMPNG 110
           V++LL ++       LV E     
Sbjct: 100 VIRLLDWFETQEGFMLVLERPLPA 123

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 13/118 (11%)

Query: 39  GKDGFGSVYKGQLH-TGGLIAVKMLENSNF---SAVEF-INEVSTIGRIHHVNVVQLLGF 93
           G+ GFG V+  Q+  TG L A K L           +  + E   + ++H   +V L   
Sbjct: 194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA 253

Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEK----LHEVALGTARGIEYLHN 147
           +   +   LV   M  G +  HI+  +     F   +      ++      G+E+LH 
Sbjct: 254 FETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS----GLEHLHQ 307

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 27/125 (21%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFIN-----EVSTIGRIHHVNVVQLLG 92
           G+  +G V +     T    AVK+L+      +         E+  + R+ H NV+QL+ 
Sbjct: 14  GEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVD 73

Query: 93  FYSEGSKRA--LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTAR--------GI 142
                 K+   +V EY   G  +      E R                A         G+
Sbjct: 74  VLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR--------FPV---CQAHGYFCQLIDGL 122

Query: 143 EYLHN 147
           EYLH+
Sbjct: 123 EYLHS 127

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 39.0 bits (91), Expect = 3e-04
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 5/79 (6%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFIN----EVSTIGRIHHVNVVQLLGF 93
           G   FG V  G+   TG  +AVK+L      +++ +     E+  +    H ++++L   
Sbjct: 25  GVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV 84

Query: 94  YSEGSKRALVYEYMPNGSL 112
            S  S   +V EY+  G L
Sbjct: 85  ISTPSDIFMVMEYVSGGEL 103

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 38.5 bits (90), Expect = 3e-04
 Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 12/115 (10%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSE 96
           G    G V +     TG   A+K+L +S     +   EV    +     ++V +L  Y  
Sbjct: 38  GLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYEN 93

Query: 97  GSKRA----LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                    ++ E M  G L   I   E   ++F+  +  E+       I++LH+
Sbjct: 94  MHHGKRCLLIIMECMEGGELFSRIQ--ERGDQAFTEREAAEIMRDIGTAIQFLHS 146

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 5/79 (6%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFIN----EVSTIGRIHHVNVVQLLGF 93
           G   FG V  G+   TG  +AVK+L      +++ +     E+  +    H ++++L   
Sbjct: 20  GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79

Query: 94  YSEGSKRALVYEYMPNGSL 112
            S  +   +V EY+  G L
Sbjct: 80  ISTPTDFFMVMEYVSGGEL 98

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 18/122 (14%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAV----------EFINEVSTIGRI-HHVN 86
           G+     V +     T    AVK+++ +   +             + EV  + ++  H N
Sbjct: 26  GRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPN 85

Query: 87  VVQLLGFYSEGSKRALVYEYMPNGSL-DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
           ++QL   Y   +   LV++ M  G L D        +    S ++  ++       I  L
Sbjct: 86  IIQLKDTYETNTFFFLVFDLMKKGELFDYLT----EKVT-LSEKETRKIMRALLEVICAL 140

Query: 146 HN 147
           H 
Sbjct: 141 HK 142

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 38.1 bits (89), Expect = 5e-04
 Identities = 28/118 (23%), Positives = 40/118 (33%), Gaps = 21/118 (17%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
           G   FG     +   T  L+AVK +E           E+     + H N+V+        
Sbjct: 29  GSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTP 88

Query: 98  SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTAR--------GIEYLHN 147
           +  A++ EY   G L   I  N GR          E     AR        G+ Y H+
Sbjct: 89  THLAIIMEYASGGELYERIC-NAGR--------FSE---DEARFFFQQLLSGVSYCHS 134

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 37.4 bits (87), Expect = 7e-04
 Identities = 12/80 (15%), Positives = 27/80 (33%), Gaps = 7/80 (8%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKML-----ENSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G       ++         +A+  +        +    E ++    + RI    V ++L 
Sbjct: 40  GGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQ-ETLSRTLRLSRIDKPGVARVLD 98

Query: 93  FYSEGSKRALVYEYMPNGSL 112
                +   +V E++  GSL
Sbjct: 99  VVHTRAGGLVVAEWIRGGSL 118

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 37.2 bits (87), Expect = 7e-04
 Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 11/115 (9%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKML-----ENSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
           G  G  +VY  +       +A+K +     E        F  EV    ++ H N+V ++ 
Sbjct: 20  GGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLK-RFEREVHNSSQLSHQNIVSMID 78

Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              E     LV EY+   +L      + G     S +           GI++ H+
Sbjct: 79  VDEEDDCYYLVMEYIEGPTL-SEYIESHGP---LSVDTAINFTNQILDGIKHAHD 129

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 37.4 bits (87), Expect = 7e-04
 Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 12/88 (13%)

Query: 39  GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVE---------FINEVSTIGRIH-HVNV 87
           G+     V +     TG   AVK++E +                  E   + ++  H ++
Sbjct: 103 GRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHI 162

Query: 88  VQLLGFYSEGSKRALVYEYMPNGSL-DR 114
           + L+  Y   S   LV++ M  G L D 
Sbjct: 163 ITLIDSYESSSFMFLVFDLMRKGELFDY 190

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	148
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.96
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.96
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.95
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.95
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.95
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.95
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.95
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.94
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.94
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.94
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.94
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.93
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.93
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.92
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.92
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.92
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.91
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.91
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.9
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.89
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.89
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.89
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.89
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.88
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.88
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.88
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.88
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.88
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.88
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.88
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.88
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.88
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.88
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.87
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.87
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.87
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.87
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.87
3uqc_A	286	Probable conserved transmembrane protein; structur	99.87
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.87
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.87
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.87
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.87
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.87
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.87
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.87
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.87
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.87
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.87
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.87
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.87
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.86
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.86
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.86
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.86
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.86
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.86
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.86
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.86
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.86
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.86
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.86
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.86
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.86
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.86
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.86
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.86
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.86
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.86
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.86
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.86
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.86
3bhy_A	283	Death-associated protein kinase 3; death associate	99.86
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.86
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.86
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.86
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.86
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.86
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.85
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.85
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.85
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.85
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.85
3niz_A	311	Rhodanese family protein; structural genomics, str	99.85
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.85
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.85
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.85
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.85
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.85
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.85
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.85
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.85
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.85
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.85
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.85
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.85
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.85
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.85
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.85
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.85
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.85
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.85
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.85
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.85
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.85
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.85
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.85
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.84
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.84
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.84
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.84
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.84
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.84
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.84
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.84
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.84
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.84
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.84
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.84
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.84
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.84
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.84
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.84
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.84
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.84
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.84
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.84
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.84
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.84
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.84
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.84
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.84
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.84
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.84
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.84
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.84
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.83
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.83
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.83
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.83
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.83
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.83
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.83
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.83
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.83
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.83
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.83
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.83
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.83
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.83
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.83
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.83
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.82
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.82
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.82
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.82
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.82
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.82
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.82
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.82
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.82
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.82
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.82
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.82
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.82
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.82
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.82
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.82
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.82
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.82
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.82
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.82
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.82
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.82
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.82
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.82
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.81
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.81
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.81
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.81
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.81
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.81
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.81
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.81
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.81
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.81
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.81
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.81
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.81
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.81
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.81
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.8
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.8
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.8
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.8
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.8
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.8
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.8
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.8
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.8
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.8
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.8
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.8
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.8
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.8
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.79
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.79
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.79
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.79
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.79
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.79
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.79
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.79
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.79
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.79
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.79
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.79
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.78
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.78
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.78
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.78
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.78
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.78
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.78
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.78
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.78
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.77
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.77
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.77
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.77
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.77
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.77
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.77
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.76
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.76
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.76
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.76
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.75
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.75
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.75
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.75
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.74
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.74
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.74
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.73
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.73
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.72
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.69
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.62
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.62
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.62
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.45
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.43
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.34
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.9
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.5
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.46
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.34
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.84
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.55
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.44
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.38
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.36
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.28
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.2
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.18
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	96.55
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	95.44
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	95.37
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	95.12
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	93.74
3mes_A	424	Choline kinase; malaria, structural genomics, stru	93.2
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	92.84
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	92.73
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	92.5
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	91.65
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	91.47
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	91.19
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	89.07
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	84.99

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.96  E-value=4.1e-28  Score=171.75  Aligned_cols=117  Identities=20%  Similarity=0.278  Sum_probs=98.2

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++|++.+.||+|+||.||+|+. .+|+.||+|+++......   +.+.+|+.+|..++||||+++++++.+++.+|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            5899999999999999999996 479999999998755443   458899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+||+|.+++...  ....+++..++.++.||+.||+|||++
T Consensus       104 y~~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~ylH~~  144 (350)
T 4b9d_A          104 YCEGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVHDR  144 (350)
T ss_dssp             CCTTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999998532  345579999999999999999999974

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.96  E-value=1.3e-28  Score=171.75  Aligned_cols=117  Identities=21%  Similarity=0.219  Sum_probs=104.4

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCC----CcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|++.+.||+|+||.||+|+. .+++.+|+|++++.    ....+.+.+|+.+|+.++||||+++++++.+++.+||
T Consensus        30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi  109 (311)
T 4aw0_A           30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF  109 (311)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            346799999999999999999996 57999999999753    2234568899999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||||+||+|.+++.    ..+.+++..+..++.||+.||+|||++
T Consensus       110 vmEy~~gG~L~~~i~----~~~~l~e~~~~~~~~qi~~al~ylH~~  151 (311)
T 4aw0_A          110 GLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLHGK  151 (311)
T ss_dssp             EECCCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999993    445799999999999999999999974

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.95  E-value=4.2e-28  Score=168.95  Aligned_cols=123  Identities=23%  Similarity=0.419  Sum_probs=102.8

Q ss_pred             HhhhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCC
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGS   98 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   98 (148)
                      .+..++|.+.+.||+|+||.||+|++.      ++..||+|+++..... .+++.+|+.+|++++||||+++++++.+++
T Consensus         9 ~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~   88 (299)
T 4asz_A            9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD   88 (299)
T ss_dssp             BCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             ccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence            345678999999999999999999842      4678999999764332 456899999999999999999999999999


Q ss_pred             eEEEEEeccCCCChhhcccccC---------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNE---------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..+||||||++|+|.+++..+.         .....+++.++..++.|++.||.|||++
T Consensus        89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~  147 (299)
T 4asz_A           89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ  147 (299)
T ss_dssp             SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999985431         2345699999999999999999999974

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.95  E-value=9.9e-28  Score=169.57  Aligned_cols=114  Identities=25%  Similarity=0.341  Sum_probs=102.1

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      +.|++.+.||+|+||.||+|+. .+|+.||+|+++.... ..+.+.+|+.+|+.++||||+++++++.+.+.+|||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            5699999999999999999996 4799999999976433 3455889999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||+|.+++..     ..+++..+..++.||+.||+|||++
T Consensus       154 ~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~  189 (346)
T 4fih_A          154 EGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ  189 (346)
T ss_dssp             TTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999998832     3589999999999999999999974

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.95  E-value=7.9e-28  Score=169.53  Aligned_cols=123  Identities=28%  Similarity=0.483  Sum_probs=104.4

Q ss_pred             HhhhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCC
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGS   98 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   98 (148)
                      .+..+++.+.+.||+|+||.||+|++.      ++..||||+++..... .+++.+|+.+|.+++||||+++++++.+++
T Consensus        37 ~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~  116 (329)
T 4aoj_A           37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR  116 (329)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             ccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            345678899999999999999999853      4778999999764432 356899999999999999999999999999


Q ss_pred             eEEEEEeccCCCChhhcccccCC-----------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEG-----------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..+||||||++|+|.+++..+..           ...++++.++..++.|++.||.|||++
T Consensus       117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~  177 (329)
T 4aoj_A          117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL  177 (329)
T ss_dssp             SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999854321           235689999999999999999999974

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.95  E-value=1.9e-27  Score=166.27  Aligned_cols=124  Identities=26%  Similarity=0.414  Sum_probs=104.6

Q ss_pred             HHhhhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEe
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSE   96 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   96 (148)
                      .++..+++++.+.||+|+||.||+|.+.      ++..||||.++....  ..+.+.+|+.++.+++||||++++|++..
T Consensus        21 ~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~  100 (308)
T 4gt4_A           21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK  100 (308)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE
Confidence            3456678899999999999999999842      467899999975332  35679999999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChhhcccccCC------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           97 GSKRALVYEYMPNGSLDRHIFPNEG------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        97 ~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++..+||||||++|+|.+++..+..            ....+++..+..++.||+.||+|||++
T Consensus       101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~  164 (308)
T 4gt4_A          101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH  164 (308)
T ss_dssp             SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999854321            134689999999999999999999974

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.95  E-value=2.6e-27  Score=171.20  Aligned_cols=114  Identities=25%  Similarity=0.341  Sum_probs=102.6

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      +.|++.+.||+|+||.||+|.. .+|+.||+|+++.... ..+.+.+|+.+|+.++||||+++++++.+.+.+|||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            5699999999999999999996 4799999999976544 3455889999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||+|.+++..     ..+++..+..++.||+.||+|||++
T Consensus       231 ~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH~~  266 (423)
T 4fie_A          231 EGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ  266 (423)
T ss_dssp             TTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999998832     3589999999999999999999974

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.94  E-value=4.5e-27  Score=161.79  Aligned_cols=114  Identities=18%  Similarity=0.275  Sum_probs=97.2

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|++.+.||+|+||.||+|.. .+++.||+|+++....    ....+.+|+.+++.++||||+++++++.+++..|+||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            4799999999999999999995 4799999999976433    2345889999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||| +|+|.+++.    ..+.+++..+..++.|++.||+|||++
T Consensus        93 Ey~-~g~L~~~l~----~~~~l~e~~~~~~~~qi~~al~ylH~~  131 (275)
T 3hyh_A           93 EYA-GNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCHRH  131 (275)
T ss_dssp             ECC-CEEHHHHHH----HSCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eCC-CCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999 679999883    345799999999999999999999975

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.94  E-value=8.8e-27  Score=162.60  Aligned_cols=119  Identities=31%  Similarity=0.538  Sum_probs=101.8

Q ss_pred             HHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           24 LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      .|++..+++.+.+.||+|+||.||+|++.  ..+|||+++......   +.+.+|+.++++++||||+++++++. .+.+
T Consensus        30 ~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~  106 (307)
T 3omv_A           30 YWEIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNL  106 (307)
T ss_dssp             CCBCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred             CcEEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeE
Confidence            35677889999999999999999999864  368999987654443   45889999999999999999999875 4568


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||||||++|+|.+++..   ....+++..+..++.||+.||+|||++
T Consensus       107 ~iVmEy~~gGsL~~~l~~---~~~~l~~~~~~~i~~qia~gL~yLH~~  151 (307)
T 3omv_A          107 AIVTQWCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLHAK  151 (307)
T ss_dssp             EEEEECCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEcCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999843   235689999999999999999999974

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.94  E-value=6.3e-27  Score=164.97  Aligned_cols=111  Identities=23%  Similarity=0.277  Sum_probs=99.3

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccC
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      +.|.+.+.||+|+||.||+|++ .+|..||+|+++.....    .+|+.++..++||||+++++++.+++.+|||||||+
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~----~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~  133 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE  133 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC----THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH----HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence            4678889999999999999996 47999999999764432    369999999999999999999999999999999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+|.+++.    ..+.+++..+..++.||+.||+|||++
T Consensus       134 gg~L~~~l~----~~~~l~e~~~~~~~~qi~~aL~ylH~~  169 (336)
T 4g3f_A          134 GGSLGQLIK----QMGCLPEDRALYYLGQALEGLEYLHTR  169 (336)
T ss_dssp             TCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999993    345699999999999999999999975

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.94  E-value=1e-26  Score=161.18  Aligned_cols=113  Identities=24%  Similarity=0.351  Sum_probs=97.5

Q ss_pred             ceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEe----CCeEEEE
Q 041447           32 LDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSE----GSKRALV  103 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~lv  103 (148)
                      |++.+.||+|+||.||+|.+ .++..||+|.+......   .+.+.+|+.++++++||||+++++++.+    .+.++||
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            36778899999999999996 47889999999764433   3458899999999999999999999865    3458999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||++|+|.+++.    ....+++..+..++.||+.||+|||++
T Consensus       108 mEy~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~ylH~~  148 (290)
T 3fpq_A          108 TELMTSGTLKTYLK----RFKVMKIKVLRSWCRQILKGLQFLHTR  148 (290)
T ss_dssp             EECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             EeCCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999993    345789999999999999999999974

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.94  E-value=1.1e-27  Score=166.87  Aligned_cols=116  Identities=21%  Similarity=0.269  Sum_probs=96.9

Q ss_pred             hcCceeecccccccceEEEEEEe----cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL----HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~----~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      .++|++.+.||+|+||.||+|+.    .+++.+|+|+++....   ....+.+|+.+|.+++||||+++++++.+++.+|
T Consensus        23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~  102 (304)
T 3ubd_A           23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY  102 (304)
T ss_dssp             GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred             ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence            35799999999999999999984    2577899999976432   2235788999999999999999999999999999


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||||+||+|.+++.    ..+.+++..+..++.|++.||+|||++
T Consensus       103 ivmEy~~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~aL~ylH~~  145 (304)
T 3ubd_A          103 LILDFLRGGDLFTRLS----KEVMFTEEDVKFYLAELALALDHLHSL  145 (304)
T ss_dssp             EEECCCTTCEEHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999999993    445799999999999999999999974

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.93  E-value=5.7e-26  Score=158.25  Aligned_cols=118  Identities=16%  Similarity=0.236  Sum_probs=96.5

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCC--------
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGS--------   98 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--------   98 (148)
                      ++|++.+.||+|+||.||+|+. .+++.||+|+++.....  .+.+.+|+.+|.+++||||+++++++...+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            4689999999999999999996 47899999999764432  345889999999999999999999987543        


Q ss_pred             ----eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 ----KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                          .+|++||||++|+|.+++.... .....++..++.++.|++.||+|||++
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~  137 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSK  137 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHC
Confidence                3789999999999999985432 223356777899999999999999974

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.93  E-value=1.1e-25  Score=157.10  Aligned_cols=113  Identities=26%  Similarity=0.323  Sum_probs=93.3

Q ss_pred             cCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCC----eEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS----KRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e  105 (148)
                      .+|.+.+.||+|+||.||+|+++ |..||||+++...........|+..+..++||||+++++++..++    .++||||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E   81 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence            46889999999999999999885 889999999754322222345555667889999999999987653    5799999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||++|+|.+++..     ..+++..+..++.|++.||+|||++
T Consensus        82 y~~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~  119 (303)
T 3hmm_A           82 YHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHME  119 (303)
T ss_dssp             CCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999943     3489999999999999999999963

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.92  E-value=5.3e-25  Score=165.05  Aligned_cols=116  Identities=21%  Similarity=0.323  Sum_probs=103.3

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      ++|++.+.||+|+||.||+|.. .+|+.+|+|++...... .+.+.+|+.+|..++||||+++++++.+.+.++|+||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            5799999999999999999996 47999999999765443 445889999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||+|.+++..   ....+++..+..++.||+.||.|||++
T Consensus       237 ~gg~L~~~i~~---~~~~l~e~~~~~~~~qi~~al~ylH~~  274 (573)
T 3uto_A          237 SGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHEN  274 (573)
T ss_dssp             CCCBHHHHHTC---TTSCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999998832   335689999999999999999999974

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.92  E-value=9.4e-25  Score=157.33  Aligned_cols=114  Identities=18%  Similarity=0.304  Sum_probs=99.0

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEe------CCe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSE------GSK   99 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~   99 (148)
                      ++|++++.||+|+||.||+|.. .+|+.||+|+++......   ..+.+|+.+|+.++||||+++++++..      .+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            5799999999999999999996 479999999997654432   347899999999999999999998754      367


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||||||. |+|.+++    ...+.+++..+..++.||+.||.|||++
T Consensus       134 ~~ivmE~~~-g~L~~~i----~~~~~l~~~~~~~~~~qil~al~ylH~~  177 (398)
T 4b99_A          134 VYVVLDLME-SDLHQII----HSSQPLTLEHVRYFLYQLLRGLKYMHSA  177 (398)
T ss_dssp             EEEEEECCS-EEHHHHH----TSSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEeCCC-CCHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            899999996 5899998    4456799999999999999999999974

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.92  E-value=4.6e-25  Score=156.70  Aligned_cols=126  Identities=24%  Similarity=0.345  Sum_probs=104.5

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCC-CcccceeeE
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHH-VNVVQLLGF   93 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~-~~i~~~~~~   93 (148)
                      .-|+++.++|++.+.||+|+||.||+|.+.      .++.||+|.+......  .+.+.+|+.+|.+++| |||++++++
T Consensus        57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~  136 (353)
T 4ase_A           57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA  136 (353)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence            457888999999999999999999999843      2357999999764432  3458899999999975 999999999


Q ss_pred             EEeC-CeEEEEEeccCCCChhhcccccCC------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           94 YSEG-SKRALVYEYMPNGSLDRHIFPNEG------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        94 ~~~~-~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +..+ +.++||||||++|+|.++++....            ....+++..+..++.||+.||+|||++
T Consensus       137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~  204 (353)
T 4ase_A          137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR  204 (353)
T ss_dssp             ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC
Confidence            8764 568999999999999999864321            134589999999999999999999974

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.91  E-value=4.7e-24  Score=161.11  Aligned_cols=116  Identities=22%  Similarity=0.321  Sum_probs=98.6

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHH---HHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFIN---EVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~---e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      .++|.+.+.||+|+||.||.|+. .+|+.+|+|++++...    ......+   ++.++..++||||+++++++.+.+.+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            46899999999999999999996 4799999999965321    2222333   35667788999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||||||+||+|.+++    ...+.+++..+..++.||+.||+|||++
T Consensus       268 ylVmEy~~GGdL~~~l----~~~~~l~E~~a~~y~~qIl~aL~yLH~~  311 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILGLEHMHNR  311 (689)
T ss_dssp             EEEECCCCSCBHHHHH----HHHCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecCCCCcHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999999999    3446799999999999999999999974

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.91  E-value=1.6e-23  Score=149.25  Aligned_cols=112  Identities=17%  Similarity=0.258  Sum_probs=99.1

Q ss_pred             hcCceeecccccccceEEEEEEec----CCCEEEEEEccCCCcCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~----~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      .+.|++.+.||+|+||.||+|+.+    +++.||+|.+.... ....+.+|+.+|..+ +||||+++++++.+.+..++|
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lv   98 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIA   98 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEE
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEE
Confidence            457999999999999999999842    46789999986543 455688999999988 599999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||++|+|.+++       +.+++..+..++.|++.||+|||++
T Consensus        99 mE~~~g~~L~~~~-------~~l~~~~~~~~~~qll~al~ylH~~  136 (361)
T 4f9c_A           99 MPYLEHESFLDIL-------NSLSFQEVREYMLNLFKALKRIHQF  136 (361)
T ss_dssp             EECCCCCCHHHHH-------TTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeCCCcccHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999988       2489999999999999999999974

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.90  E-value=5.7e-23  Score=140.71  Aligned_cols=120  Identities=27%  Similarity=0.415  Sum_probs=108.2

Q ss_pred             HhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      .+..++|++.+.||+|+||.||.+...++..+|+|.+.......+.+.+|+.++..++||||+++++++.+.+..+++||
T Consensus         6 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (269)
T 4hcu_A            6 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE   85 (269)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             EeChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence            44567899999999999999999998778889999998877777889999999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++++|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        86 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~  125 (269)
T 4hcu_A           86 FMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA  125 (269)
T ss_dssp             CCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eCCCCcHHHHHHh---cCcccCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999998843   335689999999999999999999974

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.89  E-value=2e-22  Score=143.69  Aligned_cols=116  Identities=24%  Similarity=0.319  Sum_probs=103.5

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-------CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-------SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      .+.|.+.+.||+|+||.||.|.. .++..+|+|++.....       ....+.+|+.++..++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            45799999999999999999996 4789999999976433       245688999999999999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||||+++|+|.+++    .....+++..+..++.|++.||.|||++
T Consensus        91 ~lv~e~~~gg~L~~~l----~~~~~l~~~~~~~i~~qi~~aL~~LH~~  134 (361)
T 2yab_A           91 VLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK  134 (361)
T ss_dssp             EEEEECCCSCBHHHHH----TTCSCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEcCCCCcHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999999998    4456789999999999999999999974

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=1.6e-22  Score=142.14  Aligned_cols=117  Identities=13%  Similarity=0.189  Sum_probs=104.1

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .++|.+.+.||+|+||.||+|... ++..+|+|.+.........+.+|+.++..++||||+++++++.+.+..+++|||+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   83 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence            468999999999999999999964 6889999999866555566889999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|+|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        84 ~g~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~  121 (321)
T 1tki_A           84 SGLDIFERINT---SAFELNEREIVSYVHQVCEALQFLHSH  121 (321)
T ss_dssp             CCCBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999998832   234689999999999999999999974

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.89  E-value=1.4e-22  Score=139.57  Aligned_cols=121  Identities=26%  Similarity=0.370  Sum_probs=105.9

Q ss_pred             HHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      +.+..++|++.+.||+|+||.||.+...++..+|+|++.........+.+|+.++..++||||+++++++...+..+++|
T Consensus        19 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   98 (283)
T 3gen_A           19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT   98 (283)
T ss_dssp             TBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             ccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence            34566789999999999999999999887888999999887777788999999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+++|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        99 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~  139 (283)
T 3gen_A           99 EYMANGCLLNYLRE---MRHRFQTQQLLEMCKDVCEAMEYLESK  139 (283)
T ss_dssp             CCCTTCBHHHHHHC---GGGCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eccCCCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999843   235589999999999999999999974

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.89  E-value=1.4e-22  Score=144.46  Aligned_cols=116  Identities=22%  Similarity=0.268  Sum_probs=105.1

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .++|.+.+.||+|+||.||.+... ++..+|+|.+.........+.+|+.++..++||||+++++++...+..++||||+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   98 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA   98 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence            468999999999999999999964 7899999999876666677889999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+|+|.+++.    ....+++..++.++.|++.||.|||++
T Consensus        99 ~~~~L~~~l~----~~~~~~~~~~~~i~~ql~~~L~~LH~~  135 (361)
T 3uc3_A           99 SGGELYERIC----NAGRFSEDEARFFFQQLLSGVSYCHSM  135 (361)
T ss_dssp             CSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999883    345689999999999999999999964

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.88  E-value=1.1e-22  Score=139.10  Aligned_cols=119  Identities=27%  Similarity=0.401  Sum_probs=107.3

Q ss_pred             hhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +..++|++.+.||+|+||.||.+...++..+|+|.+.........+.+|+.++..++||||+++++++...+..+++|||
T Consensus         5 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (268)
T 3sxs_A            5 LKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY   84 (268)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             echhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence            45678999999999999999999987788899999988777778899999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++...   ...+++..++.++.|++.||.|||++
T Consensus        85 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~  123 (268)
T 3sxs_A           85 ISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH  123 (268)
T ss_dssp             CTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999988432   34589999999999999999999974

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.88  E-value=2.2e-22  Score=141.83  Aligned_cols=116  Identities=18%  Similarity=0.280  Sum_probs=102.9

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ..+|.+.+.||+|+||.||.|.. .++..+|+|++......   ...+.+|+.+++.++||||+++++++...+..++||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            45899999999999999999996 57999999999764433   345789999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|.+++.    ..+.+++..+..++.|++.||.|||++
T Consensus        94 e~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~al~~lH~~  133 (328)
T 3fe3_A           94 EYASGGEVFDYLV----AHGRMKEKEARSKFRQIVSAVQYCHQK  133 (328)
T ss_dssp             CCCTTCBHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ECCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999883    335689999999999999999999974

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.88  E-value=5.7e-22  Score=138.94  Aligned_cols=119  Identities=36%  Similarity=0.655  Sum_probs=105.3

Q ss_pred             cCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccC
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      ++|.+.+.||+|+||.||+|...++..+|+|.+...... ...+.+|+.++..++||||+++++++...+..+++|||++
T Consensus        39 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  118 (321)
T 2qkw_B           39 NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME  118 (321)
T ss_dssp             CCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCT
T ss_pred             hccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCC
Confidence            589999999999999999999877899999998765443 4568899999999999999999999999999999999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|+|.+++.........+++..++.++.|++.||.|||++
T Consensus       119 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  158 (321)
T 2qkw_B          119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR  158 (321)
T ss_dssp             TCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999865444445689999999999999999999974

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.88  E-value=2.2e-22  Score=142.92  Aligned_cols=122  Identities=24%  Similarity=0.316  Sum_probs=104.7

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCC------CcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCe
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS------NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   99 (148)
                      ...+.|++.+.||+|+||.||+|.. .+++.+|+|++...      ....+.+.+|+.++..++||||+++++++...+.
T Consensus        21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~  100 (351)
T 3c0i_A           21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM  100 (351)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            3456799999999999999999986 47899999998541      2245678899999999999999999999999999


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++||||+++|+|.+.+.........+++..++.++.|++.||.|||++
T Consensus       101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~  149 (351)
T 3c0i_A          101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN  149 (351)
T ss_dssp             EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999999887754333345689999999999999999999974

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.88  E-value=5.8e-22  Score=139.43  Aligned_cols=115  Identities=26%  Similarity=0.305  Sum_probs=102.5

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-------CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-------SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      +.|.+.+.||+|+||.||.|.. .++..+|+|.+.....       ....+.+|+.++..++||||+++++++...+..+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            4689999999999999999996 4788999999866432       3456889999999999999999999999999999


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||||+++|+|.+++    .....+++..++.++.|++.||.|||++
T Consensus        91 lv~e~~~~~~L~~~l----~~~~~~~~~~~~~i~~qi~~al~~lH~~  133 (326)
T 2y0a_A           91 LILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLHSL  133 (326)
T ss_dssp             EEEECCCSCBHHHHH----TTSSCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCCCCCHHHHH----HhcCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999998    3456789999999999999999999964

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.88  E-value=6.3e-22  Score=141.16  Aligned_cols=116  Identities=23%  Similarity=0.287  Sum_probs=103.1

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      .++|.+.+.||+|+||.||+|.. .++..+|+|++.......   ..+.+|+.++..++||||+++++++.+.+..++||
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            45799999999999999999996 478899999997755443   34789999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+|+|.+++    .....+++..++.++.|++.||.|||++
T Consensus       108 e~~~gg~L~~~l----~~~~~~~~~~~~~~~~qi~~al~~lH~~  147 (362)
T 2bdw_A          108 DLVTGGELFEDI----VAREFYSEADASHCIQQILESIAYCHSN  147 (362)
T ss_dssp             CCCCSCBHHHHH----TTCSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ecCCCCCHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999988    3445689999999999999999999974

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.88  E-value=5.4e-22  Score=139.46  Aligned_cols=116  Identities=23%  Similarity=0.293  Sum_probs=101.0

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      .++|++.+.||+|+||.||+|... ++..+|+|++......  .+.+.+|+.++..++||||+++++++...+..+++||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            468999999999999999999964 7889999998654332  3458899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++|+|.+++    .....+++..++.++.|++.||+|||++
T Consensus        86 ~~~~~~L~~~l----~~~~~~~~~~~~~i~~qi~~aL~~LH~~  124 (323)
T 3tki_A           86 YCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI  124 (323)
T ss_dssp             CCTTEEGGGGS----BTTTBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCcHHHHH----hhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999998    4455689999999999999999999964

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.88  E-value=9.2e-22  Score=137.23  Aligned_cols=117  Identities=26%  Similarity=0.394  Sum_probs=102.7

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .++|.+.+.||+|+||.||++.. .++..+|+|.+..... ....+.+|+.++..++||||+++++++...+..++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            46899999999999999999996 4788999998865333 344588999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|+|.+++..   ....+++..+..++.|++.||+|||++
T Consensus        89 ~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~  127 (310)
T 3s95_A           89 IKGGTLRGIIKS---MDSQYPWSQRVSFAKDIASGMAYLHSM  127 (310)
T ss_dssp             CTTCBHHHHHHH---CCTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999843   235689999999999999999999974

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.88  E-value=3.6e-22  Score=136.32  Aligned_cols=119  Identities=27%  Similarity=0.404  Sum_probs=107.0

Q ss_pred             hhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +..++|++.+.||+|+||.||.+...++..+|+|.+.......+.+.+|+.++..++||||+++++++...+..+++|||
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (267)
T 3t9t_A            5 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF   84 (267)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred             EchhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence            44568999999999999999999987788999999988777777899999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        85 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~  123 (267)
T 3t9t_A           85 MEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA  123 (267)
T ss_dssp             CTTCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCcHHHHHhh---CcccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999998843   234589999999999999999999974

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.87  E-value=3.5e-22  Score=141.30  Aligned_cols=117  Identities=23%  Similarity=0.282  Sum_probs=102.7

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCC----CcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|++.+.||+|+||.||.++. .+++.+|+|+++..    ......+.+|+.++..++||||+++++++.+.+..++
T Consensus         3 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   82 (337)
T 1o6l_A            3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence            346899999999999999999996 47899999998652    2234567899999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+++|+|.+++.    ....+++..+..++.||+.||+|||++
T Consensus        83 v~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~  124 (337)
T 1o6l_A           83 VMEYANGGELFFHLS----RERVFTEERARFYGAEIVSALEYLHSR  124 (337)
T ss_dssp             EEECCTTCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999883    345689999999999999999999974

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.87  E-value=1e-21  Score=136.33  Aligned_cols=117  Identities=20%  Similarity=0.218  Sum_probs=102.6

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|++.+.||+|+||.||.+.. .++..+|+|.+......    ...+.+|+..+..++||||+++++++...+..++
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l   88 (294)
T 4eqm_A            9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL   88 (294)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred             hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence            456899999999999999999995 47889999998654332    2357899999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||+++++|.+++.    ....+++..++.++.|++.||.|||++
T Consensus        89 v~e~~~g~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~  130 (294)
T 4eqm_A           89 VMEYIEGPTLSEYIE----SHGPLSVDTAINFTNQILDGIKHAHDM  130 (294)
T ss_dssp             EEECCCSCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeCCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999983    335689999999999999999999974

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.87  E-value=4.2e-22  Score=147.25  Aligned_cols=122  Identities=25%  Similarity=0.368  Sum_probs=108.5

Q ss_pred             HHhhhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      +++...+|.+.+.||+|+||.||+|... ++..+|+|.+.........+.+|+.++..++||||+++++++...+..++|
T Consensus       215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv  294 (495)
T 1opk_A          215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII  294 (495)
T ss_dssp             CBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             cccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence            4556778999999999999999999965 588999999987766778899999999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+.+|+|.+++...  ....+++..++.++.|++.||+|||++
T Consensus       295 ~E~~~~g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~  337 (495)
T 1opk_A          295 TEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK  337 (495)
T ss_dssp             EECCTTCBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEccCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999998542  235589999999999999999999974

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.87  E-value=8.3e-22  Score=136.99  Aligned_cols=115  Identities=22%  Similarity=0.307  Sum_probs=101.8

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .++|.+.+.||+|+||.||.|.. .++..+|+|.+..... ..+.+.+|+.++..++||||+++++++...+..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            45799999999999999999995 5789999999865433 355688999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+|+|.+++..     ..+++..++.++.|++.||.|||++
T Consensus        99 ~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~  135 (297)
T 3fxz_A           99 LAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN  135 (297)
T ss_dssp             CTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999998832     3489999999999999999999974

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.87  E-value=5.1e-22  Score=139.34  Aligned_cols=131  Identities=35%  Similarity=0.593  Sum_probs=109.8

Q ss_pred             CCCcHHHHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEE
Q 041447           17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFY   94 (148)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~   94 (148)
                      ...++.++.. ..++|.+.+.||+|+||.||+|...++..+|+|++.....  ....+.+|+.++..++||||+++++++
T Consensus        18 ~~~~~~~~~~-~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   96 (326)
T 3uim_A           18 KRFSLRELQV-ASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC   96 (326)
T ss_dssp             EECCTHHHHT-TTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred             ceecHHHHHH-HhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence            3345555544 4568999999999999999999877789999999876432  223588999999999999999999999


Q ss_pred             EeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           95 SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        95 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ...+..+++|||+.+|+|.+++.........+++..+..++.|++.||.|||++
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  150 (326)
T 3uim_A           97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDH  150 (326)
T ss_dssp             CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999866544556699999999999999999999974

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.87  E-value=1.5e-21  Score=135.22  Aligned_cols=115  Identities=14%  Similarity=0.090  Sum_probs=99.6

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCH----HHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSA----VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ...+|.+.+.||+|+||.||+|... +++.+|+|++.......    ..+.+|+..+..++||||+++++++...+..++
T Consensus        29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  108 (286)
T 3uqc_A           29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV  108 (286)
T ss_dssp             TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence            3457999999999999999999964 68899999998754432    558899999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+++++|.+++.    ..  .....+..++.|++.||+|||++
T Consensus       109 v~e~~~g~~L~~~l~----~~--~~~~~~~~i~~ql~~aL~~lH~~  148 (286)
T 3uqc_A          109 VAEWIRGGSLQEVAD----TS--PSPVGAIRAMQSLAAAADAAHRA  148 (286)
T ss_dssp             EEECCCEEEHHHHHT----TC--CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecCCCCHHHHHh----cC--CChHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999982    22  35567889999999999999974

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.87  E-value=3.8e-22  Score=146.03  Aligned_cols=123  Identities=21%  Similarity=0.360  Sum_probs=107.7

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      +.+++..++|.+.+.||+|+||.||+|...++..+|+|.+.......+.+.+|+.++..++||||+++++++. .+..++
T Consensus       181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~l  259 (454)
T 1qcf_A          181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYI  259 (454)
T ss_dssp             TCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             cceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEE
Confidence            3456777899999999999999999999877888999999887767788999999999999999999999876 667899


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+.+|+|.+++...  ....+++..++.++.|++.||+|||++
T Consensus       260 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~  303 (454)
T 1qcf_A          260 ITEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR  303 (454)
T ss_dssp             EECCCTTCBHHHHHHSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999998432  123578999999999999999999974

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.87  E-value=8.2e-22  Score=138.38  Aligned_cols=117  Identities=18%  Similarity=0.277  Sum_probs=102.5

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCC----cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|++.+.||+|+||.||.++. .+++.+|+|++....    .....+.+|..++..++||||+++++++.+.+..++
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l   83 (318)
T 1fot_A            4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM   83 (318)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred             ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence            346899999999999999999996 478999999986532    234557789999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+++|+|.+++.    ....+++..+..++.|++.||+|||++
T Consensus        84 v~e~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~  125 (318)
T 1fot_A           84 IMDYIEGGELFSLLR----KSQRFPNPVAKFYAAEVCLALEYLHSK  125 (318)
T ss_dssp             EECCCCSCBHHHHHH----HTSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999983    345689999999999999999999974

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.87  E-value=7.8e-22  Score=135.61  Aligned_cols=123  Identities=25%  Similarity=0.392  Sum_probs=106.5

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      +-+++..++|++.+.||+|+||.||.|...++..+|+|.+.........+.+|+.++..++||||+++++++. .+..++
T Consensus         6 ~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~   84 (279)
T 1qpc_A            6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYI   84 (279)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred             hhcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEE
Confidence            3456677899999999999999999999877788999999877667778999999999999999999999876 456899


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||+.+++|.+++...  ....+++..++.++.|++.||.|||++
T Consensus        85 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~  128 (279)
T 1qpc_A           85 ITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER  128 (279)
T ss_dssp             EEECCTTCBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999998321  123589999999999999999999974

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.87  E-value=1.2e-21  Score=136.86  Aligned_cols=123  Identities=29%  Similarity=0.491  Sum_probs=104.3

Q ss_pred             HHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           24 LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      ...+...+|.+.+.||+|+||.||+|... +..+|+|++.......   ..+.+|+.++.+++||||+++++++...+..
T Consensus        31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  109 (309)
T 3p86_A           31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL  109 (309)
T ss_dssp             -CBCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred             cccCChhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence            33455678999999999999999999874 7889999997755443   3578999999999999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||||+.+|+|.+++.... ....+++..++.++.|++.||+|||++
T Consensus       110 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~  156 (309)
T 3p86_A          110 SIVTEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNR  156 (309)
T ss_dssp             EEEEECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             EEEEecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence            99999999999999884321 123489999999999999999999974

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.87  E-value=3.6e-22  Score=143.41  Aligned_cols=119  Identities=18%  Similarity=0.271  Sum_probs=104.2

Q ss_pred             HhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCC----CcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      .+..++|.+.+.||+|+||.||.+.. .++..+|+|++...    ......+.+|+.++..++||||+++++++.+.+..
T Consensus        11 ~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~   90 (384)
T 4fr4_A           11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDM   90 (384)
T ss_dssp             CCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            34557899999999999999999996 46889999998652    22345688999999999999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||||+.+|+|.+++    .....+++..+..++.|++.||.|||++
T Consensus        91 ~lv~e~~~gg~L~~~l----~~~~~l~~~~~~~~~~qi~~aL~~LH~~  134 (384)
T 4fr4_A           91 FMVVDLLLGGDLRYHL----QQNVHFKEETVKLFICELVMALDYLQNQ  134 (384)
T ss_dssp             EEEECCCTTEEHHHHH----HTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEecCCCCcHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999999988    3455699999999999999999999974

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.87  E-value=6.2e-22  Score=139.33  Aligned_cols=120  Identities=23%  Similarity=0.339  Sum_probs=99.1

Q ss_pred             HHhhhcCceeecccccccceEEEEEEe----cCCCEEEEEEccCCCc-----CHHHHHHHHHHHhcCCCCcccceeeEEE
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQL----HTGGLIAVKMLENSNF-----SAVEFINEVSTIGRIHHVNVVQLLGFYS   95 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~----~~~~~~avk~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~   95 (148)
                      ..+..++|++.+.||+|+||.||.++.    .++..+|+|++.....     ....+.+|+.++..++||||+++++++.
T Consensus        12 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   91 (327)
T 3a62_A           12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ   91 (327)
T ss_dssp             -CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE
T ss_pred             CCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE
Confidence            345567899999999999999999985    4788999999976432     2334678999999999999999999999


Q ss_pred             eCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        96 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..+..++||||+++|+|.+++.    ....+++..+..++.|++.||.|||++
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH~~  140 (327)
T 3a62_A           92 TGGKLYLILEYLSGGELFMQLE----REGIFMEDTACFYLAEISMALGHLHQK  140 (327)
T ss_dssp             CSSCEEEEEECCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCEEEEEEeCCCCCcHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999883    345689999999999999999999974

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.87  E-value=4.7e-22  Score=145.48  Aligned_cols=123  Identities=28%  Similarity=0.420  Sum_probs=107.4

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      +.+++..++|.+.+.||+|+||.||+|....+..+|+|.+.......+.+.+|+.++..++||||+++++++.. +..++
T Consensus       177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~i  255 (452)
T 1fmk_A          177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI  255 (452)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred             cccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEE
Confidence            34566778899999999999999999998767789999998766677789999999999999999999998865 67899


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+++|+|.+++...  ....+++..+..++.|++.||+|||++
T Consensus       256 v~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~  299 (452)
T 1fmk_A          256 VTEYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM  299 (452)
T ss_dssp             EECCCTTCBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EehhhcCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999998432  234589999999999999999999974

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.87  E-value=1.4e-21  Score=144.57  Aligned_cols=116  Identities=22%  Similarity=0.321  Sum_probs=99.4

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--------------CHHHHHHHHHHHhcCCCCcccceeeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--------------SAVEFINEVSTIGRIHHVNVVQLLGF   93 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--------------~~~~~~~e~~~l~~l~~~~i~~~~~~   93 (148)
                      .++|.+.+.||+|+||.||.|.. .++..+|+|++.....              ..+.+.+|+.++..++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            46899999999999999999996 4688999999876432              23558899999999999999999999


Q ss_pred             EEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        94 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+.+..++|||||++|+|.+++.    ....+++..++.++.|++.||.|||++
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH~~  165 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQII----NRHKFDECDAANIMKQILSGICYLHKH  165 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999999998883    335689999999999999999999974

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.87  E-value=1.2e-21  Score=133.81  Aligned_cols=119  Identities=25%  Similarity=0.382  Sum_probs=102.6

Q ss_pred             hhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeC--CeEE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEG--SKRA  101 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~  101 (148)
                      +..++|.+.+.||+|+||.||+|... +..+|+|++......   ...+.+|+.++..++||||+++++++...  +..+
T Consensus         7 i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   85 (271)
T 3kmu_A            7 IDFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT   85 (271)
T ss_dssp             CCGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCE
T ss_pred             CCHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeE
Confidence            34568999999999999999999986 888999999875544   33588999999999999999999999876  7789


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|||+++|+|.+++...  ....+++..++.++.|++.||.|||++
T Consensus        86 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~  130 (271)
T 3kmu_A           86 LITHWMPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHTL  130 (271)
T ss_dssp             EEEECCTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHHTTS
T ss_pred             eeecccCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999998432  233589999999999999999999973

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.87  E-value=2.6e-21  Score=139.09  Aligned_cols=117  Identities=19%  Similarity=0.298  Sum_probs=102.4

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .++|.+.+.||+|+||.||+|.. .++..+|+|.+..... ....+.+|+.++..++||||+++++++...+..++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            35799999999999999999996 4788999999876443 234588999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+|+|.+++..   ....+++..++.++.|++.||+|||++
T Consensus       130 ~~gg~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~  168 (387)
T 1kob_A          130 LSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMHEH  168 (387)
T ss_dssp             CCCCBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999998832   234689999999999999999999974

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.87  E-value=2.3e-21  Score=142.59  Aligned_cols=116  Identities=22%  Similarity=0.283  Sum_probs=103.0

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCC----cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      ..+|.+.+.||+|+||.||.|... +|..+|+|++....    .....+.+|+.+++.++||||+++++++...+..++|
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            468999999999999999999964 79999999986532    1234688999999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+++|+|.+++    .....+++..+..++.|++.||+|||++
T Consensus        95 ~E~~~gg~L~~~l----~~~~~l~~~~~~~i~~qi~~aL~~LH~~  135 (476)
T 2y94_A           95 MEYVSGGELFDYI----CKNGRLDEKESRRLFQQILSGVDYCHRH  135 (476)
T ss_dssp             EECCSSEEHHHHT----TSSSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EeCCCCCcHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999998    3456799999999999999999999974

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.87  E-value=4.6e-22  Score=142.44  Aligned_cols=122  Identities=25%  Similarity=0.389  Sum_probs=104.9

Q ss_pred             HHHhhhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           24 LRKLLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      .+.+..++|.+.+.||+|+||.||.|... ++..||+|.+......  ...+.+|+.++..++||||+++++++...+..
T Consensus       108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  187 (377)
T 3cbl_A          108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI  187 (377)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCc
Confidence            34566778999999999999999999974 7889999998754321  23478999999999999999999999998999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||||+++|+|.+++..   ....+++..+..++.|++.||+|||++
T Consensus       188 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~  232 (377)
T 3cbl_A          188 YIVMELVQGGDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLESK  232 (377)
T ss_dssp             EEEEECCTTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999843   234589999999999999999999974

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.86  E-value=1.2e-21  Score=135.39  Aligned_cols=119  Identities=18%  Similarity=0.288  Sum_probs=103.9

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCC--cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN--FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++|.+.+.||+|+||.||++.. .++..+|+|.+....  .....+.+|+.++..++||||+++++++...+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            4799999999999999999996 468899999986633  2456788999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|+|.+++.........+++..++.++.|++.||+|||++
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~  143 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ  143 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999988854333346689999999999999999999964

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.86  E-value=2.8e-21  Score=135.48  Aligned_cols=118  Identities=15%  Similarity=0.246  Sum_probs=98.3

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCC--------
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGS--------   98 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--------   98 (148)
                      ++|++.+.||+|+||.||+|+.. ++..+|+|++.....  ..+.+.+|+.++..++||||+++++++...+        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            47899999999999999999964 789999999875443  2456889999999999999999999986543        


Q ss_pred             -------------------------------------------------eEEEEEeccCCCChhhcccccCCCCCCCCHH
Q 041447           99 -------------------------------------------------KRALVYEYMPNGSLDRHIFPNEGRGKSFSWE  129 (148)
Q Consensus        99 -------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~  129 (148)
                                                                       ..+++||||++|+|.+++.... .....++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~  164 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDREHG  164 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSCHH
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-CccchhhH
Confidence                                                             3899999999999999985532 33445777


Q ss_pred             HHHHHHHHHHHHHhhhhcC
Q 041447          130 KLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       130 ~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++.++.|++.||+|||++
T Consensus       165 ~~~~i~~qi~~aL~~LH~~  183 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSK  183 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHhC
Confidence            8999999999999999974

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.86  E-value=9.9e-22  Score=143.51  Aligned_cols=116  Identities=18%  Similarity=0.199  Sum_probs=100.8

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      .++|.+.+.||+|+||.||+|.. .++..+|+|++......   ...+.+|+.++..++||||+++++++.+.+..++||
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            45799999999999999999985 47889999999775543   234789999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+|+|.+.+.    ....+++..+..++.|++.||.|||++
T Consensus        90 E~~~gg~L~~~i~----~~~~~~e~~~~~i~~qil~aL~~lH~~  129 (444)
T 3soa_A           90 DLVTGGELFEDIV----AREYYSEADASHCIQQILEAVLHCHQM  129 (444)
T ss_dssp             CCCBCCBHHHHHH----HCSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999883    345689999999999999999999974

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.86  E-value=1.1e-21  Score=139.11  Aligned_cols=119  Identities=22%  Similarity=0.302  Sum_probs=101.0

Q ss_pred             HhhhcCceeecccccccceEEEEEEec-CCCEEEEEEccCC----CcCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENS----NFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~----~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~   99 (148)
                      ....++|.+.+.||+|+||.||.|+.. +++.+|+|+++..    .........|..++..+ +||||+++++++.+.+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            345678999999999999999999964 7889999998653    22345577888888876 89999999999999999


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++||||+++|+|.+++.    ....+++..+..++.|++.||+|||++
T Consensus        93 ~~lv~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~  137 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQ----SCHKFDLSRATFYAAEIILGLQFLHSK  137 (345)
T ss_dssp             EEEEEECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999983    335689999999999999999999974

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.86  E-value=1.9e-21  Score=133.81  Aligned_cols=120  Identities=24%  Similarity=0.326  Sum_probs=103.1

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC---HHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS---AVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      .++|.+.+.||+|+||.||.|... ++..+|+|.+......   ...+.+|+..+..+ +||||+++++++...+..+++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            357899999999999999999964 7899999998764332   34578899999888 899999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+++++|.+++.........+++..++.++.|++.||.|||++
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~  134 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM  134 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999854322335689999999999999999999974

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.86  E-value=1.2e-21  Score=139.31  Aligned_cols=119  Identities=23%  Similarity=0.317  Sum_probs=100.7

Q ss_pred             HhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCC----cCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN----FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~   99 (148)
                      .+..++|++.+.||+|+||.||.|+. .++..+|+|++....    .......+|..++..+ +||||+++++++.+.+.
T Consensus        19 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~   98 (353)
T 3txo_A           19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR   98 (353)
T ss_dssp             ----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             CCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE
Confidence            44567899999999999999999996 478899999986532    2334577899999887 69999999999999999


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++||||+.+|+|.+++.    ....+++..++.++.|++.||+|||++
T Consensus        99 ~~lv~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~  143 (353)
T 3txo_A           99 LFFVMEFVNGGDLMFHIQ----KSRRFDEARARFYAAEIISALMFLHDK  143 (353)
T ss_dssp             EEEEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999883    345689999999999999999999974

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.86  E-value=4.5e-21  Score=133.06  Aligned_cols=116  Identities=22%  Similarity=0.285  Sum_probs=96.5

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---------------------------HHHHHHHHHHH
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---------------------------AVEFINEVSTI   79 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---------------------------~~~~~~e~~~l   79 (148)
                      ..++|.+.+.||+|+||.||.|.. .++..+|+|++......                           .+.+.+|+.++
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   90 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL   90 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence            346899999999999999999986 46889999998654321                           23478999999


Q ss_pred             hcCCCCcccceeeEEEe--CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           80 GRIHHVNVVQLLGFYSE--GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        80 ~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..++||||+++++++..  .+..+++|||+++++|.+++     ....+++..++.++.|++.||.|||++
T Consensus        91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~  156 (298)
T 2zv2_A           91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-----TLKPLSEDQARFYFQDLIKGIEYLHYQ  156 (298)
T ss_dssp             HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-----CSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999999986  56799999999999998865     234689999999999999999999974

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.86  E-value=6.8e-22  Score=147.33  Aligned_cols=123  Identities=28%  Similarity=0.420  Sum_probs=107.5

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      +.+++..++|++.+.||+|+||.||+|....+..||+|++.......+.+.+|+.+|..++||||+++++++.. +..++
T Consensus       260 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~l  338 (535)
T 2h8h_A          260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI  338 (535)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred             cceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceE
Confidence            34567778899999999999999999998777789999998766677789999999999999999999998865 67899


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+.+|+|.+++...  ....+++..++.++.||+.||.|||++
T Consensus       339 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~  382 (535)
T 2h8h_A          339 VTEYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM  382 (535)
T ss_dssp             EECCCTTEEHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eeehhcCCcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999432  224589999999999999999999974

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.86  E-value=2.3e-21  Score=137.63  Aligned_cols=115  Identities=19%  Similarity=0.282  Sum_probs=96.0

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .++|.+.+.||+|+||.||+|... ++..+|+|++.... ..+.+.+|+.++..++||||+++++++...+..+++|||+
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  130 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV  130 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence            457999999999999999999964 68899999987643 3455778999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|+|.+++    .....+++..++.++.|++.||.|||++
T Consensus       131 ~~~~L~~~l----~~~~~~~~~~~~~i~~qi~~~L~~LH~~  167 (349)
T 2w4o_A          131 TGGELFDRI----VEKGYYSERDAADAVKQILEAVAYLHEN  167 (349)
T ss_dssp             CSCBHHHHH----TTCSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999988    3445689999999999999999999974

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.86  E-value=1.7e-21  Score=138.44  Aligned_cols=116  Identities=23%  Similarity=0.258  Sum_probs=102.0

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCC----cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      .++|.+.+.||+|+||.||.++.. ++..+|+|++....    .....+.+|+.++..++||||+++++++.+.+..++|
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  119 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence            358999999999999999999964 78999999986532    2345678999999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+++|+|.+++.    ....+++..+..++.|++.||+|||++
T Consensus       120 ~e~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~  160 (350)
T 1rdq_E          120 MEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYLHSL  160 (350)
T ss_dssp             EECCTTCBHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EcCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999983    335689999999999999999999974

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.86  E-value=3.3e-21  Score=141.92  Aligned_cols=117  Identities=25%  Similarity=0.323  Sum_probs=103.6

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCC----cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|.+.+.||+|+||.||.|... ++..+|+|++....    .....+.+|+.++..++||||+++++++...+..++
T Consensus        24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            3457999999999999999999964 78999999986543    245668899999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+.+|+|.+++    .....+++..++.++.|++.||.|||++
T Consensus       104 v~e~~~~~~L~~~~----~~~~~~~~~~~~~i~~qi~~~l~~lH~~  145 (484)
T 3nyv_A          104 VGEVYTGGELFDEI----ISRKRFSEVDAARIIRQVLSGITYMHKN  145 (484)
T ss_dssp             EECCCCSCBHHHHH----HTCSCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCCCCCHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999988    3445689999999999999999999974

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.86  E-value=2.4e-21  Score=136.23  Aligned_cols=119  Identities=28%  Similarity=0.443  Sum_probs=101.6

Q ss_pred             hhhcCceeecccccccceEEEEEEec----CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~----~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      +..++|.+.+.||+|+||.||.|...    .+..+|+|.+......  ...+.+|+.++..++||||+++++++...+..
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  125 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA  125 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence            44568999999999999999999853    3446999999764322  34588999999999999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||||+++|+|.+++..   ....+++..++.++.|++.||.|||++
T Consensus       126 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~  170 (325)
T 3kul_A          126 MIVTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSDL  170 (325)
T ss_dssp             EEEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeeCCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999843   335689999999999999999999974

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.86  E-value=4.2e-21  Score=137.81  Aligned_cols=118  Identities=17%  Similarity=0.218  Sum_probs=103.1

Q ss_pred             hcCceeecccccc--cceEEEEEEec-CCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           29 DSGLDLTWSSGKD--GFGSVYKGQLH-TGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        29 ~~~~~~~~~lg~g--~~~~v~~~~~~-~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..+|++.+.||+|  +||.||+|... ++..||+|++.......   ..+.+|+.+++.++||||+++++++...+..++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            4579999999999  99999999964 78999999997654333   347789999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+++|+|.+++...  ....+++..+..++.|++.||.|||++
T Consensus       104 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~  147 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTH--FMDGMNELAIAYILQGVLKALDYIHHM  147 (389)
T ss_dssp             EEECCTTCBHHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEccCCCCHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999988542  234589999999999999999999974

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.86  E-value=2.6e-21  Score=135.69  Aligned_cols=116  Identities=26%  Similarity=0.328  Sum_probs=102.5

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc-------CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF-------SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      .++|.+.+.||+|+||.||.|... ++..+|+|.+.....       ....+.+|+.++..++||||+++++++...+..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            346899999999999999999964 788999999866332       245688999999999999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|||+++++|.+++    .....+++..++.++.|++.||.|||++
T Consensus        91 ~lv~e~~~~~~L~~~l----~~~~~~~~~~~~~i~~qi~~aL~~lH~~  134 (321)
T 2a2a_A           91 VLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK  134 (321)
T ss_dssp             EEEECCCCSCBHHHHH----HTCSCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEcCCCCcHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999998    3345689999999999999999999974

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.86  E-value=1.3e-21  Score=137.32  Aligned_cols=116  Identities=28%  Similarity=0.439  Sum_probs=99.3

Q ss_pred             hhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCC----eEEE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS----KRAL  102 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~l  102 (148)
                      +..++|++.+.||+|+||.||+|+.. +..||+|++...........+|+..+..++||||+++++++....    ..++
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l   99 (322)
T 3soc_A           21 FQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL   99 (322)
T ss_dssp             ETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence            34568999999999999999999876 789999999765444455667888899999999999999988744    3799


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+++|+|.+++..     ..+++..++.++.|++.||.|||++
T Consensus       100 v~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~  140 (322)
T 3soc_A          100 ITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHED  140 (322)
T ss_dssp             EEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred             EEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999833     3489999999999999999999974

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.86  E-value=2.2e-21  Score=137.61  Aligned_cols=117  Identities=21%  Similarity=0.252  Sum_probs=101.1

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC----HHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS----AVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~  101 (148)
                      ..++|++.+.||+|+||.||.++.. +++.+|+|++......    ...+.+|..++..+ +||||+++++++.+.+..+
T Consensus         7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   86 (345)
T 3a8x_A            7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF   86 (345)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence            3468999999999999999999964 6889999999764332    23467899999887 7999999999999999999


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||||+++|+|.+++.    ....+++..++.++.|++.||+|||++
T Consensus        87 lv~e~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~  129 (345)
T 3a8x_A           87 FVIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHER  129 (345)
T ss_dssp             EEECCCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999999883    335689999999999999999999974

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.86  E-value=1.1e-21  Score=135.37  Aligned_cols=121  Identities=25%  Similarity=0.374  Sum_probs=107.0

Q ss_pred             HHhhhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      +++..++|++.+.||+|+||.||.|... ++..+|+|.+.......+.+.+|+.++..++||||+++++++...+..+++
T Consensus         8 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v   87 (288)
T 3kfa_A            8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII   87 (288)
T ss_dssp             TBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred             ccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence            3455678999999999999999999964 588899999987666667789999999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |||+.+++|.+++...  ....+++..++.++.|++.||.|||+
T Consensus        88 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~  129 (288)
T 3kfa_A           88 TEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEK  129 (288)
T ss_dssp             EECCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEcCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHH
Confidence            9999999999998542  34568999999999999999999996

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.86  E-value=4.9e-21  Score=132.55  Aligned_cols=115  Identities=17%  Similarity=0.306  Sum_probs=98.7

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++|++.+.||+|+||.||+|.. .++..+|+|++......   ...+.+|+.++..++||||+++++++.+.+..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            4799999999999999999996 47889999999764433   2557899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+.+ ++.+.+.   .....+++..++.++.|++.||+|||++
T Consensus        82 ~~~~-~l~~~~~---~~~~~l~~~~~~~~~~ql~~~l~~lH~~  120 (292)
T 3o0g_A           82 FCDQ-DLKKYFD---SCNGDLDPEIVKSFLFQLLKGLGFCHSR  120 (292)
T ss_dssp             CCSE-EHHHHHH---HTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCC-CHHHHHH---hCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9987 5655552   2345689999999999999999999974

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.86  E-value=5.5e-21  Score=132.10  Aligned_cols=115  Identities=22%  Similarity=0.289  Sum_probs=100.5

Q ss_pred             cCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++|.+.+.||+|+||.||+|...++..+|+|.+......   ...+.+|+.++..++||||+++++++...+..+++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            479999999999999999999877999999998664332   35678999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+ +|.+++..   ....+++..+..++.|++.||.|||++
T Consensus        82 ~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~  119 (288)
T 1ob3_A           82 LDQ-DLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHDR  119 (288)
T ss_dssp             CSE-EHHHHHHT---STTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCC-CHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            986 88888732   235689999999999999999999974

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.86  E-value=1.6e-21  Score=139.51  Aligned_cols=118  Identities=28%  Similarity=0.453  Sum_probs=101.0

Q ss_pred             hhcCceeecccccccceEEEEEEec----CCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~----~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      ...+|.+.+.||+|+||.||+|+..    ++..+|+|.+.....  ....+.+|+.++.+++||||+++++++...+..+
T Consensus        43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  122 (373)
T 2qol_A           43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM  122 (373)
T ss_dssp             CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred             CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence            3467999999999999999999853    567899999976432  2345889999999999999999999999999999


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||||+++|+|.+++..   ....+++..++.++.|++.||.|||++
T Consensus       123 lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~  166 (373)
T 2qol_A          123 IVTEYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYLSDM  166 (373)
T ss_dssp             EEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999999843   334689999999999999999999974

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.86  E-value=1.6e-20  Score=131.85  Aligned_cols=127  Identities=23%  Similarity=0.307  Sum_probs=106.7

Q ss_pred             CCCcHHHHHHhhhc---------CceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCC
Q 041447           17 DNPSYEDLRKLLDS---------GLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHV   85 (148)
Q Consensus        17 ~~~~~~~~~~~~~~---------~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~   85 (148)
                      ...+++++.++...         .|...+.||+|+||.||+|... +|+.+|+|++...... .+.+.+|+.++..++||
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            34556666665542         3677889999999999999964 7999999999765443 45688999999999999


Q ss_pred             cccceeeEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           86 NVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        86 ~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++++++...+..+++|||+++++|.+++.     ...+++..+..++.|++.||.|||++
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-----~~~l~~~~~~~i~~qi~~~L~~LH~~  160 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLHAQ  160 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999999999999999999999882     23589999999999999999999964

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.86  E-value=3.9e-21  Score=132.27  Aligned_cols=116  Identities=22%  Similarity=0.343  Sum_probs=102.2

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc-------CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF-------SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      .++|.+.+.||+|+||.||.+... ++..+|+|.+.....       ....+.+|+.++..++||||+++++++...+..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV   83 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence            357999999999999999999964 788999999865332       245688999999999999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|||+++++|.+++.    ....+++..++.++.|++.||.|||++
T Consensus        84 ~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~  127 (283)
T 3bhy_A           84 VLILELVSGGELFDFLA----EKESLTEDEATQFLKQILDGVHYLHSK  127 (283)
T ss_dssp             EEEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeecCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999983    345689999999999999999999964

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.86  E-value=7.9e-21  Score=132.69  Aligned_cols=116  Identities=26%  Similarity=0.322  Sum_probs=100.8

Q ss_pred             hcCceee-cccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEE
Q 041447           29 DSGLDLT-WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        29 ~~~~~~~-~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      .+.|.+. +.||+|+||.||.|.. .++..+|+|++..... ....+.+|+.++.++ +||||+++++++...+..++||
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   90 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF   90 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence            4578884 7899999999999995 4789999999976543 356688999999885 7999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|.+++.    ....+++..++.++.|++.||.|||++
T Consensus        91 e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH~~  130 (316)
T 2ac3_A           91 EKMRGGSILSHIH----KRRHFNELEASVVVQDVASALDFLHNK  130 (316)
T ss_dssp             ECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EcCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999983    335689999999999999999999974

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.86  E-value=1.6e-21  Score=139.28  Aligned_cols=127  Identities=27%  Similarity=0.428  Sum_probs=106.0

Q ss_pred             HHHHHhhhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeE
Q 041447           22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGF   93 (148)
Q Consensus        22 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~   93 (148)
                      .++.++..++|.+.+.||+|+||.||+|...      ++..+|+|.+......  ...+.+|+.++..++||||++++++
T Consensus        63 ~~~~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~  142 (367)
T 3l9p_A           63 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGV  142 (367)
T ss_dssp             GGSCBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cchhhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            3455666788999999999999999999832      4668999998653322  3357899999999999999999999


Q ss_pred             EEeCCeEEEEEeccCCCChhhcccccC---CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           94 YSEGSKRALVYEYMPNGSLDRHIFPNE---GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        94 ~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +...+..++||||+.+|+|.+++....   .....+++..++.++.|++.||.|||++
T Consensus       143 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  200 (367)
T 3l9p_A          143 SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN  200 (367)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999985432   1224589999999999999999999974

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.86  E-value=2.7e-21  Score=142.54  Aligned_cols=116  Identities=25%  Similarity=0.365  Sum_probs=102.7

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccC---CCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLEN---SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      .++|.+.+.||+|+||.||+|... ++..+|+|++..   .......+.+|+.++..++||||+++++++...+..++||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            457999999999999999999964 789999999854   2334567889999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||.+|+|.+.+.    ....+++..++.++.|++.||.|||++
T Consensus       101 e~~~~~~L~~~~~----~~~~~~~~~~~~i~~qi~~al~~lH~~  140 (486)
T 3mwu_A          101 ELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHKH  140 (486)
T ss_dssp             CCCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EcCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999998883    335689999999999999999999974

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.86  E-value=1.6e-21  Score=141.13  Aligned_cols=116  Identities=19%  Similarity=0.193  Sum_probs=100.6

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCCEEEEEEccCC----CcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|.+.+.||+|+||.||.|+.. ++..+|+|++...    ......+.+|..++..++||||+++++++.+.+..++
T Consensus        67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l  146 (410)
T 3v8s_A           67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM  146 (410)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence            3468999999999999999999964 6889999998652    1223347789999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+++|+|.+++..     ..+++..+..++.|++.||+|||++
T Consensus       147 V~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~  187 (410)
T 3v8s_A          147 VMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM  187 (410)
T ss_dssp             EECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999998832     3489999999999999999999974

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.86  E-value=3.5e-21  Score=142.20  Aligned_cols=115  Identities=21%  Similarity=0.311  Sum_probs=97.7

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      +.|.+.+.||+|+||.||+|... ++..+|+|++.....   ....+.+|+.++..++||||+++++++...+..++|||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            46999999999999999999964 788999999876432   34568899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||.+|+|.+.+.    ....+++..++.++.|++.||.|||++
T Consensus       117 ~~~~g~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~  155 (494)
T 3lij_A          117 CYKGGELFDEII----HRMKFNEVDAAVIIKQVLSGVTYLHKH  155 (494)
T ss_dssp             CCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999998883    335689999999999999999999974

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.85  E-value=4e-21  Score=140.51  Aligned_cols=120  Identities=32%  Similarity=0.447  Sum_probs=103.3

Q ss_pred             HHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCC-eEEEE
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS-KRALV  103 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv  103 (148)
                      +++..++|++.+.||+|+||.||+|... +..+|+|.++... ..+.+.+|+.++.+++||||+++++++.... ..++|
T Consensus       188 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv  265 (450)
T 1k9a_A          188 WALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV  265 (450)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred             cccChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence            3456678999999999999999999876 7799999997643 5567899999999999999999999987654 79999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+++|+|.+++...  ....+++..++.++.|++.||+|||++
T Consensus       266 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~  308 (450)
T 1k9a_A          266 TEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN  308 (450)
T ss_dssp             EECCTTCBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999998542  223478999999999999999999974

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.85  E-value=2e-21  Score=140.09  Aligned_cols=119  Identities=20%  Similarity=0.258  Sum_probs=101.4

Q ss_pred             HhhhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC----HHHHHHHHHHHhcC-CCCcccceeeEEEeCCe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS----AVEFINEVSTIGRI-HHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~   99 (148)
                      .+..++|++.+.||+|+||.||+++.. +++.+|+|++......    ...+.+|..++.++ +||||+++++++.+.+.
T Consensus        48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~  127 (396)
T 4dc2_A           48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR  127 (396)
T ss_dssp             -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE
Confidence            344578999999999999999999964 6889999999764322    23477888888776 79999999999999999


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++||||+++|+|..++.    ....+++..+..++.||+.||+|||++
T Consensus       128 ~~lV~E~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~  172 (396)
T 4dc2_A          128 LFFVIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHER  172 (396)
T ss_dssp             EEEEEECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEcCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999883    345689999999999999999999974

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.85  E-value=4.4e-21  Score=131.26  Aligned_cols=115  Identities=29%  Similarity=0.393  Sum_probs=96.7

Q ss_pred             hhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC-----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS-----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~-----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|++.+.||+|+||.||+|... +..+|+|++......     .+.+.+|+.++..++||||+++++++...+..++
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (271)
T 3dtc_A            5 DFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL   83 (271)
T ss_dssp             CTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred             chhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence            4568999999999999999999975 888999998664322     3568899999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||+++++|.+++.     ...+++..++.++.|++.||.|||++
T Consensus        84 v~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~  124 (271)
T 3dtc_A           84 VMEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDE  124 (271)
T ss_dssp             EEECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEEcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999882     34689999999999999999999974

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.85  E-value=3.8e-21  Score=137.43  Aligned_cols=122  Identities=24%  Similarity=0.390  Sum_probs=102.0

Q ss_pred             hhhcCceeecccccccceEEEEEEec--------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCcccceeeEEE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH--------TGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQLLGFYS   95 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~--------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~~~~~~   95 (148)
                      ...++|.+.+.||+|+||.||.|...        ++..+|+|++......  ...+.+|+.++..+ +||||+++++++.
T Consensus        78 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~  157 (370)
T 2psq_A           78 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT  157 (370)
T ss_dssp             CCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred             ccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence            44578999999999999999999842        3457999999764332  34588999999999 8999999999999


Q ss_pred             eCCeEEEEEeccCCCChhhcccccCC------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           96 EGSKRALVYEYMPNGSLDRHIFPNEG------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        96 ~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..+..++||||+.+|+|.+++.....            ....+++..++.++.|++.||+|||++
T Consensus       158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  222 (370)
T 2psq_A          158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ  222 (370)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999854321            124589999999999999999999974

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.85  E-value=8.6e-21  Score=130.08  Aligned_cols=115  Identities=23%  Similarity=0.307  Sum_probs=101.7

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++|++.+.||+|+||.||.|... ++..+|+|++.....  ....+.+|+.++..++||||+++++++...+..++++||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            57999999999999999999964 788999999865332  235688999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++    .....+++..++.++.|++.||.|||++
T Consensus        87 ~~~~~L~~~l----~~~~~~~~~~~~~~~~~i~~~l~~lH~~  124 (276)
T 2yex_A           87 CSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI  124 (276)
T ss_dssp             CTTEEGGGGS----BTTTBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCcHHHHH----hhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999998    3445689999999999999999999974

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.85  E-value=5.3e-21  Score=133.68  Aligned_cols=117  Identities=21%  Similarity=0.315  Sum_probs=99.3

Q ss_pred             hhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ..++|.+.+.||+|+||.||+|...+++.+|+|++......   ...+.+|+.++..++||||+++++++.+.+..++||
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            34689999999999999999999877999999998764332   245789999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+ +|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        99 e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~  138 (311)
T 3niz_A           99 EFMEK-DLKKVLDE---NKTGLQDSQIKIYLYQLLRGVAHCHQH  138 (311)
T ss_dssp             ECCSE-EHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCC-CHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99986 78777732   335589999999999999999999974

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.85  E-value=5.8e-21  Score=133.72  Aligned_cols=119  Identities=21%  Similarity=0.321  Sum_probs=101.1

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCC--cCHHHHHHHHHHHhcCCCCcccceeeEEEeCC--eEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSN--FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS--KRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv  103 (148)
                      .++|.+.+.||+|+||.||+|... ++..+|+|++....  .....+.+|+.++..++||||+++++++...+  ..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            457999999999999999999964 68899999987533  23456789999999999999999999988754  78999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+++++|.+++.... ....+++..++.++.|++.||.|||++
T Consensus        88 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~  131 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN  131 (319)
T ss_dssp             EECCTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeCCCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999985432 223489999999999999999999974

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.85  E-value=3.7e-21  Score=136.24  Aligned_cols=114  Identities=25%  Similarity=0.346  Sum_probs=98.9

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEEe
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ..++|++.+.||+|+||.||.|... ++..+|+|++......   ..+|++++..+ +||||+++++++.+.+..++|||
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD---PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC---CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC---hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            3457999999999999999999964 7889999999765432   34677777777 79999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+.+|+|.+++    .....+++..+..++.|++.||.|||++
T Consensus        97 ~~~gg~L~~~i----~~~~~~~~~~~~~~~~qi~~al~~lH~~  135 (342)
T 2qr7_A           97 LMKGGELLDKI----LRQKFFSEREASAVLFTITKTVEYLHAQ  135 (342)
T ss_dssp             CCCSCBHHHHH----HTCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCcHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999988    3445689999999999999999999974

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.85  E-value=7.1e-21  Score=131.06  Aligned_cols=116  Identities=23%  Similarity=0.297  Sum_probs=102.1

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      .++|.+.+.||+|+||.||+|.. .++..+|+|++.......   ..+.+|+.++..++||||+++++++...+..+++|
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            46899999999999999999986 468899999987654433   44778999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+++|.+.+.    ....+++..+..++.|++.||.|||++
T Consensus        85 e~~~~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~  124 (284)
T 3kk8_A           85 DLVTGGELFEDIV----AREFYSEADASHCIQQILESIAYCHSN  124 (284)
T ss_dssp             CCCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999988873    345689999999999999999999974

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.85  E-value=9.5e-21  Score=132.00  Aligned_cols=115  Identities=19%  Similarity=0.321  Sum_probs=100.9

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++|++.+.||+|+||.||+|.. .++..+|+|.+......   ...+.+|+.++..++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            5799999999999999999996 46899999998765443   2347789999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+.+++|.+++    .....+++..+..++.|++.||.|||++
T Consensus        83 ~~~~~~l~~~~----~~~~~~~~~~~~~i~~~l~~~l~~lH~~  121 (311)
T 4agu_A           83 YCDHTVLHELD----RYQRGVPEHLVKSITWQTLQAVNFCHKH  121 (311)
T ss_dssp             CCSEEHHHHHH----HTSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eCCCchHHHHH----hhhcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999998877    3345689999999999999999999974

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.85  E-value=2.8e-21  Score=133.34  Aligned_cols=119  Identities=23%  Similarity=0.329  Sum_probs=101.7

Q ss_pred             hhhcCceeecccccccceEEEEEEec-CC-------CEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeC
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH-TG-------GLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEG   97 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~-------~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   97 (148)
                      +..++|.+.+.||+|+||.||+|... ++       ..+|+|.+..... ..+.+.+|+.++..++||||+++++++..+
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   84 (289)
T 4fvq_A            5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG   84 (289)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred             echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence            45678999999999999999999843 33       4799999865433 345688999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +..+++|||+.+|+|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        85 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~  132 (289)
T 4fvq_A           85 DENILVQEFVKFGSLDTYLKK---NKNCINILWKLEVAKQLAAAMHFLEEN  132 (289)
T ss_dssp             TCCEEEEECCTTCBHHHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            999999999999999999843   234489999999999999999999974

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.85  E-value=5.3e-21  Score=131.33  Aligned_cols=116  Identities=17%  Similarity=0.228  Sum_probs=102.0

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCC-cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSN-FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .++|.+.+.||+|+||.||.|... ++..+|+|.+.... ...+.+.+|+.++..++||||+++++++...+..+++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            347999999999999999999964 67789999986643 3456788999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++.    ....+++..++.++.|++.||.|||++
T Consensus        88 ~~~~~L~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~  125 (277)
T 3f3z_A           88 CTGGELFERVV----HKRVFRESDAARIMKDVLSAVAYCHKL  125 (277)
T ss_dssp             CCSCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999998883    345689999999999999999999974

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.85  E-value=5.4e-21  Score=134.83  Aligned_cols=123  Identities=24%  Similarity=0.418  Sum_probs=103.4

Q ss_pred             HhhhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeC
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEG   97 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   97 (148)
                      ....++|.+.+.||+|+||.||+|...      ++..+|+|.+......  ...+.+|+.++..++||||+++++++...
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  122 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG  122 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence            345678999999999999999999853      3478999999764332  34588999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChhhcccccCCC--------------------CCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEGR--------------------GKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~~--------------------~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +..+++|||+++|+|.+++......                    ...+++..++.++.|++.||.|||++
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~  193 (343)
T 1luf_A          123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER  193 (343)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999988543211                    25689999999999999999999974

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.85  E-value=2.8e-21  Score=140.83  Aligned_cols=117  Identities=16%  Similarity=0.155  Sum_probs=101.2

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCC----cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      .++|.+.+.||+|+||.||+++.. +++.+|+|++....    .....+.+|..++..++||||+++++++.+.+..++|
T Consensus        73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV  152 (437)
T 4aw2_A           73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV  152 (437)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence            468999999999999999999964 67889999986521    1223378899999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+++|+|.+++..   ....+++..+..++.|++.||+|||++
T Consensus       153 ~Ey~~gg~L~~~l~~---~~~~l~e~~~~~~~~qi~~aL~~LH~~  194 (437)
T 4aw2_A          153 MDYYVGGDLLTLLSK---FEDRLPEEMARFYLAEMVIAIDSVHQL  194 (437)
T ss_dssp             ECCCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EecCCCCcHHHHHHH---ccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999832   245689999999999999999999964

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.85  E-value=2.8e-21  Score=137.42  Aligned_cols=119  Identities=22%  Similarity=0.231  Sum_probs=101.3

Q ss_pred             HhhhcCceeecccccccceEEEEEEec-CCCEEEEEEccCC----CcCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENS----NFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~----~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~   99 (148)
                      ....++|.+.+.||+|+||.||.|+.. +++.+|+|++...    ......+.+|..++..+ +||+|+++++++.+.+.
T Consensus        16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~   95 (353)
T 2i0e_A           16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR   95 (353)
T ss_dssp             ---CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE
T ss_pred             CCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE
Confidence            345678999999999999999999964 5789999998653    22345577899999887 79999999999999999


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++||||+++|+|.+++.    ....+++..++.++.|++.||+|||++
T Consensus        96 ~~lv~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~  140 (353)
T 2i0e_A           96 LYFVMEYVNGGDLMYHIQ----QVGRFKEPHAVFYAAEIAIGLFFLQSK  140 (353)
T ss_dssp             EEEEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999883    335689999999999999999999974

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.85  E-value=1.1e-20  Score=137.14  Aligned_cols=117  Identities=17%  Similarity=0.290  Sum_probs=99.2

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---------CHHHHHHHHHHHhcCCCCcccceeeEEEe
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---------SAVEFINEVSTIGRIHHVNVVQLLGFYSE   96 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   96 (148)
                      ...++|.+.+.||+|+||.||+|.. .++..+|+|++.....         ....+.+|+.++.+++||||+++++++. 
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            3456899999999999999999985 4788999999865321         1123789999999999999999999875 


Q ss_pred             CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           97 GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        97 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+..++||||+++|+|.+++    .....+++..++.++.|++.||+|||++
T Consensus       211 ~~~~~lv~e~~~~g~L~~~l----~~~~~~~~~~~~~i~~qi~~~l~~LH~~  258 (419)
T 3i6u_A          211 AEDYYIVLELMEGGELFDKV----VGNKRLKEATCKLYFYQMLLAVQYLHEN  258 (419)
T ss_dssp             SSEEEEEEECCTTCBGGGGT----SSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCceEEEEEcCCCCcHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            55689999999999999988    4456789999999999999999999974

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.85  E-value=5.6e-21  Score=135.04  Aligned_cols=116  Identities=17%  Similarity=0.237  Sum_probs=101.8

Q ss_pred             hcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCH------------------HHHHHHHHHHhcCCCCcccce
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSA------------------VEFINEVSTIGRIHHVNVVQL   90 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~------------------~~~~~e~~~l~~l~~~~i~~~   90 (148)
                      .++|.+.+.||+|+||.||.|.. ++..+|+|.+.......                  ..+.+|+.++..++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            46899999999999999999998 79999999986532211                  678899999999999999999


Q ss_pred             eeEEEeCCeEEEEEeccCCCChhhc------ccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           91 LGFYSEGSKRALVYEYMPNGSLDRH------IFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        91 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ++++...+..++||||+++|+|.++      +..  .....+++..++.++.|++.||.|||+
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~  169 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK--NYTCFIPIQVIKCIIKSVLNSFSYIHN  169 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCS--SSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh--ccccCCCHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999998      522  125678999999999999999999996

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.85  E-value=2.5e-21  Score=134.16  Aligned_cols=121  Identities=27%  Similarity=0.414  Sum_probs=101.4

Q ss_pred             HHhhhcCceeecccccccceEEEEEEe-----cCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEe--
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQL-----HTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSE--   96 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~--   96 (148)
                      ..+..++|++.+.||+|+||.||.|+.     .++..+|+|.+...... ...+.+|+.++..++||||+++++++..  
T Consensus         5 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   84 (295)
T 3ugc_A            5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG   84 (295)
T ss_dssp             -CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH
T ss_pred             CcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            345667899999999999999999983     36789999998764432 3458899999999999999999999854  


Q ss_pred             CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           97 GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        97 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ....++||||+++|+|.+++...   ...+++..++.++.|++.||.|||++
T Consensus        85 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~  133 (295)
T 3ugc_A           85 RRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK  133 (295)
T ss_dssp             HTSCEEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCceEEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC
Confidence            35689999999999999998432   34589999999999999999999974

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.85  E-value=3.1e-21  Score=135.52  Aligned_cols=134  Identities=26%  Similarity=0.400  Sum_probs=108.4

Q ss_pred             CCCCCcHHHHHHhhhcCceeecccccccceEEEEEEe------cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCc
Q 041447           15 SVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVN   86 (148)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~   86 (148)
                      .....+.+++.++..++|.+.+.||+|+||.||+|..      .++..+|+|.+.....  ....+.+|+.++..++|||
T Consensus        15 ~~~sss~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~   94 (327)
T 2yfx_A           15 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN   94 (327)
T ss_dssp             TTEEECGGGSCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTT
T ss_pred             cCCccchhhcccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCC
Confidence            3344556677778888999999999999999999983      2577899999965332  2345889999999999999


Q ss_pred             ccceeeEEEeCCeEEEEEeccCCCChhhcccccCC---CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEG---RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        87 i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++++++...+..+++|||+++++|.+++.....   ....+++..++.++.|++.||.|||++
T Consensus        95 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~  159 (327)
T 2yfx_A           95 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN  159 (327)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC
Confidence            99999999999999999999999999999854321   124589999999999999999999974

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.85  E-value=4.8e-21  Score=133.53  Aligned_cols=123  Identities=24%  Similarity=0.360  Sum_probs=102.6

Q ss_pred             HhhhcCceeecccccccceEEEEEEe------cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeC
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEG   97 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   97 (148)
                      .+..++|.+.+.||+|+||.||+|..      .++..+|+|.+......  ...+.+|+.++..++||||+++++++...
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   98 (314)
T 2ivs_A           19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD   98 (314)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence            44567899999999999999999984      23478999998754322  34578999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChhhcccccCC--------------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEG--------------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~--------------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +..+++|||+++|+|.+++.....                    ....+++..++.++.|++.||.|||++
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  169 (314)
T 2ivs_A           99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM  169 (314)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999999854321                    123489999999999999999999974

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.85  E-value=1e-20  Score=140.98  Aligned_cols=121  Identities=22%  Similarity=0.278  Sum_probs=104.4

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCC----cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|.+.+.||+|+||.||.|+. .+++.+|+|++....    .....+.+|+.++..++||||+++++++.+.+..++
T Consensus       183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  262 (543)
T 3c4z_A          183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL  262 (543)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence            346899999999999999999996 479999999986532    234557899999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||++||+|.+++.........+++..++.++.||+.||.|||++
T Consensus       263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~  308 (543)
T 3c4z_A          263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR  308 (543)
T ss_dssp             EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc
Confidence            9999999999998854333345699999999999999999999974

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.85  E-value=7.8e-21  Score=132.19  Aligned_cols=116  Identities=22%  Similarity=0.337  Sum_probs=100.2

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .++|.+.+.||+|+||.||.+... +++.+|+|.+..... ....+.+|+.++..++||||+++++++...+..+++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            457999999999999999999964 789999999976443 344588999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++|.+++.    ....+++..++.++.|++.||.|||++
T Consensus        88 ~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~  125 (304)
T 2jam_A           88 VSGGELFDRIL----ERGVYTEKDASLVIQQVLSAVKYLHEN  125 (304)
T ss_dssp             CCSCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCccHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999883    334689999999999999999999974

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.85  E-value=3.3e-21  Score=136.26  Aligned_cols=114  Identities=19%  Similarity=0.240  Sum_probs=99.5

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCC----CcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      ..+|.+.+.||+|+||.||.|.. .++..+|+|++...    ......+.+|+.++..++||||+++++++..++..++|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            35799999999999999999996 57899999998642    12234688999999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |||+ +|+|.+++.    ....+++..++.++.|++.||.|||+
T Consensus        88 ~E~~-~g~l~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~  126 (336)
T 3h4j_B           88 IEYA-GGELFDYIV----EKKRMTEDEGRRFFQQIICAIEYCHR  126 (336)
T ss_dssp             ECCC-CEEHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EECC-CCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999 679988883    33568999999999999999999996

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.85  E-value=5.1e-21  Score=133.70  Aligned_cols=123  Identities=20%  Similarity=0.253  Sum_probs=101.7

Q ss_pred             HhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEe----CCe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSE----GSK   99 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~   99 (148)
                      .+..++|.+.+.||+|+||.||.+.. .++..+|+|++..... ....+.+|+.++..++||||+++++++..    ...
T Consensus        25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (317)
T 2buj_A           25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE  104 (317)
T ss_dssp             EETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred             EECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence            34557899999999999999999996 5789999998865333 34458899999999999999999999863    347


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++++||+.+|+|.+++.........+++..++.++.|++.||.|||++
T Consensus       105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~  153 (317)
T 2buj_A          105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK  153 (317)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            8899999999999998854333456789999999999999999999974

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.85  E-value=1.7e-21  Score=136.00  Aligned_cols=116  Identities=16%  Similarity=0.202  Sum_probs=99.0

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH----HHHHHHHHHHhcCCCCcccceeeEEEeCC----e
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA----VEFINEVSTIGRIHHVNVVQLLGFYSEGS----K   99 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~   99 (148)
                      .++|++.+.||+|+||.||.+.. .++..+|+|++.......    ..+.+|+..+..++||||+++++++....    .
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            46899999999999999999996 578899999997644332    34778999999999999999999987643    3


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++||||+++++|.+++.    ....+++..++.++.|++.||.|||++
T Consensus        91 ~~lv~e~~~g~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~  135 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADACQALNFSHQN  135 (311)
T ss_dssp             EEEEEECCCEEEHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cEEEEecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            499999999999999983    335689999999999999999999974

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.85  E-value=6.7e-21  Score=133.98  Aligned_cols=112  Identities=21%  Similarity=0.260  Sum_probs=97.5

Q ss_pred             Cceee---cccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEEe
Q 041447           31 GLDLT---WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        31 ~~~~~---~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      +|.+.   +.||+|+||.||+|.. .++..+|+|++...  ......+|+.++..+. ||||+++++++.+.+..++|||
T Consensus         9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e   86 (325)
T 3kn6_A            9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVME   86 (325)
T ss_dssp             HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEE
Confidence            45543   7899999999999996 47889999998643  3456778999999997 9999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++|+|.+++.    ....+++..+..++.|++.||+|||++
T Consensus        87 ~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~LH~~  125 (325)
T 3kn6_A           87 LLNGGELFERIK----KKKHFSETEASYIMRKLVSAVSHMHDV  125 (325)
T ss_dssp             CCCSCBHHHHHH----HCSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999983    345789999999999999999999974

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.85  E-value=2.8e-21  Score=139.95  Aligned_cols=118  Identities=18%  Similarity=0.178  Sum_probs=101.7

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|++.+.||+|+||.||.++. .+++.+|+|++++...    ....+.+|..++..++||||+++++++.+.+..++
T Consensus        59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l  138 (412)
T 2vd5_A           59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL  138 (412)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred             ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence            357899999999999999999996 4789999999865221    12237789999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+++|+|.+++...   ...+++..+..++.|++.||+|||++
T Consensus       139 VmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~  181 (412)
T 2vd5_A          139 VMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL  181 (412)
T ss_dssp             EECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999998432   24689999999999999999999974

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.85  E-value=1.7e-20  Score=130.69  Aligned_cols=121  Identities=17%  Similarity=0.285  Sum_probs=102.1

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ...+|.+.+.||+|+||.||+|.. .++..+|+|.+......    ...+.+|+.++..++||||+++++.+...+..++
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l  109 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI  109 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence            446799999999999999999995 57889999998763322    3457899999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||+.+++|.+++.........+++..++.++.|++.||.|||++
T Consensus       110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~  155 (310)
T 2wqm_A          110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR  155 (310)
T ss_dssp             EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            9999999999998854323456689999999999999999999964

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.85  E-value=1.3e-20  Score=129.38  Aligned_cols=117  Identities=26%  Similarity=0.388  Sum_probs=101.9

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCC----cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      .++|.+.+.||+|+||.||.|.. .++..+|+|.+....    .....+.+|+.++..++||||+++++++...+..+++
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            35799999999999999999996 578999999986532    1235688999999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+++++|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        90 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~  131 (278)
T 3cok_A           90 LEMCHNGEMNRYLKN---RVKPFSENEARHFMHQIITGMLYLHSH  131 (278)
T ss_dssp             EECCTTEEHHHHHHT---CSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EecCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999998842   235689999999999999999999974

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.84  E-value=4.8e-21  Score=133.49  Aligned_cols=128  Identities=23%  Similarity=0.378  Sum_probs=106.5

Q ss_pred             HHHHHHhhhcCceeecccccccceEEEEEEe------cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcC-CCCccccee
Q 041447           21 YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRI-HHVNVVQLL   91 (148)
Q Consensus        21 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~   91 (148)
                      +...+++..++|.+.+.||+|+||.||.|..      .++..+|+|.+.....  ..+.+.+|+.++..+ +||||++++
T Consensus        14 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~   93 (313)
T 1t46_A           14 YDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLL   93 (313)
T ss_dssp             CCGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CccccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEE
Confidence            3444567778999999999999999999984      2567899999976443  234588999999999 899999999


Q ss_pred             eEEEeCCeEEEEEeccCCCChhhcccccCC--------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           92 GFYSEGSKRALVYEYMPNGSLDRHIFPNEG--------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        92 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++...+..+++|||+++|+|.+++.....              ....+++..++.++.|++.||.|||++
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  164 (313)
T 1t46_A           94 GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK  164 (313)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999999999998854321              123589999999999999999999974

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.84  E-value=8.9e-21  Score=130.24  Aligned_cols=119  Identities=17%  Similarity=0.264  Sum_probs=101.8

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEe--CCeEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSE--GSKRAL  102 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~l  102 (148)
                      .++|++.+.||+|+||.||++.. .+++.+|+|.+......   .+.+.+|+.++..++||||+++++++..  .+..++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            35799999999999999999996 47889999999765443   2347899999999999999999998754  678999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +|||+++++|.+++.........+++..++.++.|++.||.|||+
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~  129 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR  129 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999985543344568999999999999999999996

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.84  E-value=7.1e-21  Score=136.48  Aligned_cols=125  Identities=26%  Similarity=0.363  Sum_probs=104.3

Q ss_pred             HHHhhhcCceeecccccccceEEEEEEec--------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCcccceee
Q 041447           24 LRKLLDSGLDLTWSSGKDGFGSVYKGQLH--------TGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQLLG   92 (148)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~--------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~~~   92 (148)
                      .+++..++|.+.+.||+|+||.||+|...        ++..+|+|++......  ...+.+|+.++..+ +||||+++++
T Consensus        63 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~  142 (382)
T 3tt0_A           63 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLG  142 (382)
T ss_dssp             TTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhhee
Confidence            34566789999999999999999999842        2357999998764332  24588999999999 8999999999


Q ss_pred             EEEeCCeEEEEEeccCCCChhhcccccCC------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           93 FYSEGSKRALVYEYMPNGSLDRHIFPNEG------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        93 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++...+..++||||+++|+|.+++.....            ....+++..++.++.|++.||.|||++
T Consensus       143 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  210 (382)
T 3tt0_A          143 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK  210 (382)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999854321            124589999999999999999999974

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.84  E-value=1.4e-20  Score=135.56  Aligned_cols=119  Identities=21%  Similarity=0.321  Sum_probs=101.0

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCC--cCHHHHHHHHHHHhcCCCCcccceeeEEEeCC--eEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSN--FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS--KRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv  103 (148)
                      .++|.+.+.||+|+||.||+|... ++..+|+|++....  .....+.+|+.++..++||||+++++++...+  ..++|
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            457999999999999999999964 68999999987533  23456789999999999999999999988754  78999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+++|+|.+++.... ....+++..++.++.|++.||+|||++
T Consensus        88 ~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~  131 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN  131 (396)
T ss_dssp             ECCCTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EecCCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999985432 223389999999999999999999974

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.84  E-value=3.1e-21  Score=136.87  Aligned_cols=127  Identities=24%  Similarity=0.365  Sum_probs=103.9

Q ss_pred             HHHHHhhhcCceeecccccccceEEEEEEe------cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCcccceee
Q 041447           22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQLLG   92 (148)
Q Consensus        22 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~~~   92 (148)
                      ..-+++..++|.+.+.||+|+||.||+|..      .+++.+|+|++......  ...+.+|+.++..+ +||||+++++
T Consensus        14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~   93 (359)
T 3vhe_A           14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG   93 (359)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeee
Confidence            445667788999999999999999999973      24578999999764332  24588999999999 7899999999


Q ss_pred             EEEeCC-eEEEEEeccCCCChhhcccccCCC-------------------------------------------------
Q 041447           93 FYSEGS-KRALVYEYMPNGSLDRHIFPNEGR-------------------------------------------------  122 (148)
Q Consensus        93 ~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~-------------------------------------------------  122 (148)
                      ++...+ ..+++|||+++|+|.+++......                                                 
T Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (359)
T 3vhe_A           94 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSL  173 (359)
T ss_dssp             EECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------
T ss_pred             eeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccccc
Confidence            988754 489999999999999998543211                                                 


Q ss_pred             -------------CCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          123 -------------GKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       123 -------------~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                                   ...+++..++.++.|++.||.|||++
T Consensus       174 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~  212 (359)
T 3vhe_A          174 SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR  212 (359)
T ss_dssp             ----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             chhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC
Confidence                         12289999999999999999999974

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.84  E-value=1.8e-20  Score=130.79  Aligned_cols=125  Identities=28%  Similarity=0.422  Sum_probs=97.8

Q ss_pred             cHHHHHHhhhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCC
Q 041447           20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS   98 (148)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   98 (148)
                      ....+.....++|.+.+.||+|+||.||.|... ++..+|+|.+.... ....+.+|+.++..++||||+++++.+...+
T Consensus        19 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   97 (314)
T 3com_A           19 DEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT   97 (314)
T ss_dssp             -----------CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred             CchhhhhcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC
Confidence            344555566778999999999999999999964 68899999987643 4566889999999999999999999999999


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..+++|||+.+++|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        98 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~  144 (314)
T 3com_A           98 DLWIVMEYCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHFM  144 (314)
T ss_dssp             EEEEEEECCTTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEeecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999998832   245689999999999999999999964

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=5.9e-21  Score=134.80  Aligned_cols=126  Identities=23%  Similarity=0.322  Sum_probs=102.8

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEe------cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcC-CCCcccceeeE
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRI-HHVNVVQLLGF   93 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~~   93 (148)
                      ..+++..++|.+.+.||+|+||.||.|..      .++..+|+|.+.....  ....+.+|+.++..+ +||||++++++
T Consensus        38 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  117 (344)
T 1rjb_A           38 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGA  117 (344)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cCcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            34566778999999999999999999984      1455799999875322  345688999999999 89999999999


Q ss_pred             EEeCCeEEEEEeccCCCChhhcccccCCC-------------------CCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           94 YSEGSKRALVYEYMPNGSLDRHIFPNEGR-------------------GKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        94 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------------------~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +...+..+++|||+++|+|.+++......                   ...+++..++.++.|++.||.|||++
T Consensus       118 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  191 (344)
T 1rjb_A          118 CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK  191 (344)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999998543211                   13479999999999999999999974

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.84  E-value=6.8e-21  Score=130.99  Aligned_cols=117  Identities=21%  Similarity=0.407  Sum_probs=101.4

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|.+.+.||+|+||.||.|... ++..+|+|++.....    ....+.+|+.++..++||||+++++++...+..++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            4568999999999999999999864 677899999854221    23457899999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||+++|+|.+++.    ....+++..++.++.|++.||.|||++
T Consensus        87 v~e~~~~~~l~~~l~----~~~~~~~~~~~~~~~qi~~~l~~LH~~  128 (279)
T 3fdn_A           87 ILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANALSYCHSK  128 (279)
T ss_dssp             EECCCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999883    335689999999999999999999974

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.84  E-value=1.6e-20  Score=129.69  Aligned_cols=121  Identities=23%  Similarity=0.354  Sum_probs=104.6

Q ss_pred             HHHhhhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCC---cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCe
Q 041447           24 LRKLLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSN---FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   99 (148)
                      ......++|++.+.||+|+||.||.|... ++..+|+|++....   .....+.+|+.++..++||||+++++++...+.
T Consensus        16 ~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   95 (287)
T 2wei_A           16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSS   95 (287)
T ss_dssp             HTHHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             HHHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCe
Confidence            33445578999999999999999999964 78899999986532   345668899999999999999999999999999


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++++|++.+++|.+++.    ....+++..++.++.|++.||.|||++
T Consensus        96 ~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~LH~~  140 (287)
T 2wei_A           96 FYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHKH  140 (287)
T ss_dssp             EEEEECCCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEccCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999998873    334689999999999999999999964

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.84  E-value=6.1e-21  Score=132.32  Aligned_cols=125  Identities=18%  Similarity=0.226  Sum_probs=89.8

Q ss_pred             HHHhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           24 LRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      .+.+..++|.+.+.||+|+||.||.+.. .++..+|+|.+.....  ....+.+|+..+..++||||+++++++...+..
T Consensus         9 p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   88 (303)
T 2vwi_A            9 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL   88 (303)
T ss_dssp             ----CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCE
T ss_pred             ccccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCc
Confidence            3456678999999999999999999985 4688999999865432  234578899999999999999999999999999


Q ss_pred             EEEEeccCCCChhhccccc----CCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPN----EGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|||+++++|.+++...    ......+++..++.++.|++.||.|||++
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  140 (303)
T 2vwi_A           89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN  140 (303)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999988431    11245689999999999999999999964

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.84  E-value=1.2e-20  Score=131.63  Aligned_cols=116  Identities=16%  Similarity=0.226  Sum_probs=101.6

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      .++|.+.+.||+|+||.||.+... ++..+|+|++......    ...+.+|+.++..++||||+++++++...+..+++
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            468999999999999999999964 7889999998764332    24578999999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||+++++|.+++.    ....+++..++.++.|++.||.|||++
T Consensus       113 ~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH~~  153 (309)
T 2h34_A          113 MRLINGVDLAAMLR----RQGPLAPPRAVAIVRQIGSALDAAHAA  153 (309)
T ss_dssp             EECCCCEEHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999983    335689999999999999999999974

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.84  E-value=1.3e-20  Score=132.67  Aligned_cols=116  Identities=20%  Similarity=0.296  Sum_probs=99.1

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      ..++|.+.+.||+|+||.||+|.. .++..+|+|++......   ...+.+|+.++..++||||+++++++...+..++|
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            456899999999999999999985 47889999999764432   23467899999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+.+ +|.+++.    ....+++..++.++.|++.||.|||++
T Consensus       112 ~e~~~~-~L~~~~~----~~~~~~~~~~~~i~~ql~~~l~~LH~~  151 (329)
T 3gbz_A          112 FEYAEN-DLKKYMD----KNPDVSMRVIKSFLYQLINGVNFCHSR  151 (329)
T ss_dssp             EECCSE-EHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EecCCC-CHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999985 9999883    344689999999999999999999974

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.84  E-value=1.6e-20  Score=128.78  Aligned_cols=116  Identities=21%  Similarity=0.250  Sum_probs=101.8

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCC----cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|.+.+.||+|+||.||.|... ++..+|+|.+....    .....+.+|+..+..++||||+++++++...+..++
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (276)
T 2h6d_A            9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM   88 (276)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence            4568999999999999999999964 78999999986522    234468899999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +|||+++++|.+++.    ....+++..++.++.|++.||.|||+
T Consensus        89 v~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~  129 (276)
T 2h6d_A           89 VMEYVSGGELFDYIC----KHGRVEEMEARRLFQQILSAVDYCHR  129 (276)
T ss_dssp             EEECCCSCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeccCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999983    33468999999999999999999996

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.84  E-value=1.3e-20  Score=129.94  Aligned_cols=118  Identities=31%  Similarity=0.545  Sum_probs=100.2

Q ss_pred             HhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH--------HHHHHHHHHHhcCCCCcccceeeEEEe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA--------VEFINEVSTIGRIHHVNVVQLLGFYSE   96 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~--------~~~~~e~~~l~~l~~~~i~~~~~~~~~   96 (148)
                      ....++|.+.+.||+|+||.||+|.. .++..+|+|.+.......        ..+.+|+.++..++||||+++++++.+
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   94 (287)
T 4f0f_A           15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN   94 (287)
T ss_dssp             BCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT
T ss_pred             hhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC
Confidence            44567899999999999999999996 478899999986643321        458899999999999999999999866


Q ss_pred             CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           97 GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        97 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..  +++|||+++|+|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        95 ~~--~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~  141 (287)
T 4f0f_A           95 PP--RMVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ  141 (287)
T ss_dssp             TT--EEEEECCTTCBHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             CC--eEEEEecCCCCHHHHHhc---ccCCccHHHHHHHHHHHHHHHHHHHhC
Confidence            54  699999999999887743   345689999999999999999999974

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.84  E-value=1.2e-20  Score=135.00  Aligned_cols=111  Identities=25%  Similarity=0.327  Sum_probs=92.4

Q ss_pred             ecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCCCCh
Q 041447           35 TWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL  112 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L  112 (148)
                      .+.||+|+||.||+|.. .++..+|+|++..... ..+.+.+|+.++..++||||+++++++...+..++||||+++++|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            67899999999999986 4788999999976543 345688999999999999999999999999999999999999999


Q ss_pred             hhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          113 DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       113 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++..   ....+++..++.++.|++.||.|||++
T Consensus       174 ~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~  206 (373)
T 2x4f_A          174 FDRIID---ESYNLTELDTILFMKQICEGIRHMHQM  206 (373)
T ss_dssp             HHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            988743   234589999999999999999999974

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.84  E-value=6.5e-21  Score=136.45  Aligned_cols=118  Identities=23%  Similarity=0.287  Sum_probs=94.7

Q ss_pred             hhhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC----HHHHHHHHHH-HhcCCCCcccceeeEEEeCCeE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS----AVEFINEVST-IGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~----~~~~~~e~~~-l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      ...++|++.+.||+|+||.||.++.. ++..+|+|++......    ...+.+|..+ +..++||||+++++++.+.+..
T Consensus        35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~  114 (373)
T 2r5t_A           35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL  114 (373)
T ss_dssp             CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence            34568999999999999999999964 6889999999764332    2335566665 4668999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||||+.+|+|.+++.    ....+++..++.++.||+.||+|||++
T Consensus       115 ~lv~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~  158 (373)
T 2r5t_A          115 YFVLDYINGGELFYHLQ----RERCFLEPRARFYAAEIASALGYLHSL  158 (373)
T ss_dssp             EEEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999999883    345689999999999999999999974

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.84  E-value=1.6e-20  Score=140.64  Aligned_cols=119  Identities=27%  Similarity=0.305  Sum_probs=102.6

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCC----CcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|.+.+.||+|+||.||.|.. .++..+|+|++...    ......+.+|+.++..++||||+++++++.+.+..++
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            456799999999999999999996 47999999998652    2234457899999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||++||+|.+++...  ....+++..++.++.||+.||+|||++
T Consensus       262 VmEy~~gg~L~~~l~~~--~~~~l~e~~~~~i~~qIl~aL~yLH~~  305 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHM--GQAGFPEARAVFYAAEICCGLEDLHRE  305 (576)
T ss_dssp             EECCCCSCBHHHHHHSS--SSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEcCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999988432  233489999999999999999999974

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.84  E-value=4.5e-20  Score=129.59  Aligned_cols=122  Identities=25%  Similarity=0.409  Sum_probs=100.8

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCE--EEEEEccCCCc--CHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGL--IAVKMLENSNF--SAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~--~avk~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~  100 (148)
                      +..++|++.+.||+|+||.||.|.. .++..  +++|.+.....  ....+.+|+.++..+ +||||+++++++...+..
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~  101 (327)
T 1fvr_A           22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL  101 (327)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred             ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence            4456899999999999999999985 45654  48898865322  334588999999999 899999999999999999


Q ss_pred             EEEEeccCCCChhhcccccC------------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNE------------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|||+++|+|.+++....            .....+++..++.++.|++.||.|||++
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  161 (327)
T 1fvr_A          102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK  161 (327)
T ss_dssp             EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999985432            2234689999999999999999999974

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.84  E-value=1.7e-20  Score=129.91  Aligned_cols=116  Identities=22%  Similarity=0.202  Sum_probs=101.0

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      .++|.+.+.||+|+||.||.+... ++..+|+|++......    .+.+.+|+.++..++||||+++++++...+..+++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            457999999999999999999964 6889999998654322    34578899999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+.+++|.+++.    ....+++..++.++.|++.||+|||++
T Consensus        94 ~e~~~~~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~  134 (294)
T 2rku_A           94 LELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQYLHRN  134 (294)
T ss_dssp             EECCTTCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999873    335689999999999999999999974

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.84  E-value=9.7e-21  Score=133.40  Aligned_cols=126  Identities=23%  Similarity=0.383  Sum_probs=102.8

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEe--------cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCccccee
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQL--------HTGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQLL   91 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~--------~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~~   91 (148)
                      ..+.+..++|.+.+.||+|+||.||.|..        .++..+|+|++......  ...+.+|+.++..+ +||||++++
T Consensus        28 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~  107 (334)
T 2pvf_A           28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL  107 (334)
T ss_dssp             TTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             ccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEE
Confidence            33456678999999999999999999985        24678999999764332  34578999999999 899999999


Q ss_pred             eEEEeCCeEEEEEeccCCCChhhcccccCC------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           92 GFYSEGSKRALVYEYMPNGSLDRHIFPNEG------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        92 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++...+..++||||+++|+|.+++.....            ....+++..++.++.|++.||.|||++
T Consensus       108 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  176 (334)
T 2pvf_A          108 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ  176 (334)
T ss_dssp             EEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999854321            123489999999999999999999974

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.84  E-value=2.6e-20  Score=129.25  Aligned_cols=119  Identities=24%  Similarity=0.375  Sum_probs=99.0

Q ss_pred             hhhcCceeecccccccceEEEEEEe-----cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeC--
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-----HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEG--   97 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--   97 (148)
                      .....|++.+.||+|+||.||.|.+     .++..+|+|.+.....  ....+.+|+.++..++||||+++++++...  
T Consensus        18 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   97 (302)
T 4e5w_A           18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG   97 (302)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred             hhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence            3455789999999999999999983     3688999999875432  345688999999999999999999999876  


Q ss_pred             CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +..+++|||+++|+|.+++...   ...+++..++.++.|++.||.|||++
T Consensus        98 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~  145 (302)
T 4e5w_A           98 NGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR  145 (302)
T ss_dssp             CCEEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhhcC
Confidence            6689999999999999988432   34589999999999999999999974

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.84  E-value=1.4e-20  Score=130.35  Aligned_cols=117  Identities=20%  Similarity=0.175  Sum_probs=101.4

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc---C-------HHHHHHHHHHHhcCC-CCcccceeeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF---S-------AVEFINEVSTIGRIH-HVNVVQLLGFYS   95 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~---~-------~~~~~~e~~~l~~l~-~~~i~~~~~~~~   95 (148)
                      ..++|.+.+.||+|+||.||.|... ++..+|+|+++....   .       .+.+.+|+.++..+. ||||+++++++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            3568999999999999999999964 688999999976432   1       234678999999995 999999999999


Q ss_pred             eCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        96 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..+..+++|||+++++|.+++.    ....+++..++.++.|++.||.|||++
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~  143 (298)
T 1phk_A           95 TNTFFFLVFDLMKKGELFDYLT----EKVTLSEKETRKIMRALLEVICALHKL  143 (298)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCeEEEEEeccCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999999999999983    335689999999999999999999974

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.84  E-value=2.5e-20  Score=129.34  Aligned_cols=118  Identities=24%  Similarity=0.437  Sum_probs=100.5

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ..++|++.+.||+|+||.||.|... ++..+|+|.+..... ....+.+|+.++..++||||+++++++...+..+++||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            4568999999999999999999964 688999999876433 45668899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+++++|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        97 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~  136 (302)
T 2j7t_A           97 FCPGGAVDAIMLE---LDRGLTEPQIQVVCRQMLEALNFLHSK  136 (302)
T ss_dssp             CCTTEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eCCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999988743   235589999999999999999999974

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.84  E-value=7e-20  Score=127.27  Aligned_cols=117  Identities=20%  Similarity=0.318  Sum_probs=103.0

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      ...+.|.+.+.||+|+||.||.|.. .++..+|+|++.....  ....+.+|+.++..++||||+++++.+...+..+++
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   98 (303)
T 3a7i_A           19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII   98 (303)
T ss_dssp             CGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence            3456799999999999999999985 4788999999876433  346688999999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+++++|.+++.     ...+++..+..++.|++.||.|||++
T Consensus        99 ~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~  138 (303)
T 3a7i_A           99 MEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLHSE  138 (303)
T ss_dssp             EECCTTEEHHHHHT-----TSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999882     24589999999999999999999974

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.84  E-value=7.5e-21  Score=131.68  Aligned_cols=117  Identities=20%  Similarity=0.277  Sum_probs=99.8

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEe-----------
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE-----------   96 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----------   96 (148)
                      .++|++.+.||+|+||.||.|.. .++..+|+|.+.........+.+|+.++..++||||+++++.+..           
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            35799999999999999999996 478999999996544344568899999999999999999998765           


Q ss_pred             --CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           97 --GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        97 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                        .+..+++|||+++|+|.+++..   ....+++..++.++.|++.||+|||++
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~  135 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEALSYIHSQ  135 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHHH---SCGGGCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccCCceEEEEecCCCCCHHHhhhc---cccccchHHHHHHHHHHHHHHHHHHhC
Confidence              3568999999999999999843   234578899999999999999999974

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.84  E-value=3.1e-20  Score=130.67  Aligned_cols=116  Identities=20%  Similarity=0.296  Sum_probs=101.3

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      .++|++.+.||+|+||.||+|... ++..+|+|++.......   ..+.+|+.++..++||||+++++++...+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            468999999999999999999964 68899999987654442   34778999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+++|.+++    .....+++..++.++.|++.||.|||++
T Consensus       104 e~~~~~~l~~~~----~~~~~~~~~~~~~~~~qi~~~l~~LH~~  143 (331)
T 4aaa_A          104 EFVDHTILDDLE----LFPNGLDYQVVQKYLFQIINGIGFCHSH  143 (331)
T ss_dssp             ECCSEEHHHHHH----HSTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ecCCcchHHHHH----hhccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999998888876    3345689999999999999999999974

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.84  E-value=2.1e-20  Score=131.05  Aligned_cols=115  Identities=17%  Similarity=0.285  Sum_probs=96.8

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---------CHHHHHHHHHHHhcCCCCcccceeeEEEeCC
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---------SAVEFINEVSTIGRIHHVNVVQLLGFYSEGS   98 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   98 (148)
                      .++|.+.+.||+|+||.||.|.. .++..+|+|++.....         ....+.+|+.++..++||||+++++++....
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            45799999999999999999996 4688999999865332         1224789999999999999999999987655


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                       .+++|||+++++|.+++    .....+++..++.++.|++.||.|||++
T Consensus        89 -~~lv~e~~~~~~L~~~~----~~~~~~~~~~~~~~~~qi~~~l~~lH~~  133 (322)
T 2ycf_A           89 -YYIVLELMEGGELFDKV----VGNKRLKEATCKLYFYQMLLAVQYLHEN  133 (322)
T ss_dssp             -EEEEEECCTTEETHHHH----STTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -eEEEEecCCCCcHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence             89999999999999988    3456789999999999999999999964

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.84  E-value=1.4e-20  Score=129.64  Aligned_cols=117  Identities=20%  Similarity=0.357  Sum_probs=101.7

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCC----cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSN----FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|.+.+.||+|+||.||.|... ++..+|+|++....    .....+.+|+.++..++||||+++++++...+..++
T Consensus        12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   91 (284)
T 2vgo_A           12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL   91 (284)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence            3468999999999999999999964 67789999985422    224568899999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||+++|+|.+++.    ....+++..++.++.|++.||.|||++
T Consensus        92 v~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~  133 (284)
T 2vgo_A           92 MLEFAPRGELYKELQ----KHGRFDEQRSATFMEELADALHYCHER  133 (284)
T ss_dssp             EECCCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999883    334689999999999999999999974

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.83  E-value=3e-20  Score=130.16  Aligned_cols=118  Identities=22%  Similarity=0.352  Sum_probs=87.6

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++|++.+.||+|+||.||.|.. .++..+|+|.+.....  ....+.+|+.++..++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   84 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF   84 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence            5789999999999999999985 4789999999875432  345688999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccC--CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNE--GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+ +|.+++....  .....+++..+..++.|++.||.|||++
T Consensus        85 ~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~  127 (317)
T 2pmi_A           85 MDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN  127 (317)
T ss_dssp             CCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            985 9988874321  1234589999999999999999999974

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.83  E-value=1.5e-20  Score=133.57  Aligned_cols=116  Identities=20%  Similarity=0.308  Sum_probs=102.2

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ..++|.+.+.||+|+||.||++... ++..+|+|++......  ...+.+|+.++..++||||+++++++...+..++||
T Consensus        31 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  110 (360)
T 3eqc_A           31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM  110 (360)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence            4568999999999999999999964 7889999998764322  345889999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ||+++++|.+++.    ....+++..+..++.|++.||.|||+
T Consensus       111 e~~~~~~L~~~l~----~~~~~~~~~~~~i~~~i~~~l~~lh~  149 (360)
T 3eqc_A          111 EHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE  149 (360)
T ss_dssp             CCCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999983    33468999999999999999999996

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.83  E-value=1.9e-20  Score=132.10  Aligned_cols=116  Identities=22%  Similarity=0.209  Sum_probs=101.1

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      ..+|.+.+.||+|+||.||.+... ++..+|+|++.....    ..+.+.+|+.++..++||||+++++++.+.+..+++
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            457999999999999999999964 688999999865432    234578899999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+.+++|.+++.    ....+++..++.++.|++.||.|||++
T Consensus       120 ~e~~~~~~L~~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~  160 (335)
T 2owb_A          120 LELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQYLHRN  160 (335)
T ss_dssp             ECCCTTCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EecCCCCCHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999873    335689999999999999999999974

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.83  E-value=2.8e-20  Score=132.55  Aligned_cols=119  Identities=16%  Similarity=0.121  Sum_probs=100.2

Q ss_pred             hhcCceeecccccccceEEEEEE------ecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC---CCcccceeeEEEeCC
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQ------LHTGGLIAVKMLENSNFSAVEFINEVSTIGRIH---HVNVVQLLGFYSEGS   98 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~------~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~   98 (148)
                      ..++|.+.+.||+|+||.||+|.      ..+++.+|+|++...  ....+.+|+.++..++   |+||+.+++.+...+
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~  140 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN  140 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence            34679999999999999999994      346889999999754  4556778888887776   899999999999999


Q ss_pred             eEEEEEeccCCCChhhcccccC-CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNE-GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..++||||+++|+|.+++.... .....+++..++.++.|++.||+|||++
T Consensus       141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~  191 (365)
T 3e7e_A          141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC  191 (365)
T ss_dssp             CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            9999999999999999985422 1346699999999999999999999974

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.83  E-value=3e-20  Score=132.01  Aligned_cols=117  Identities=21%  Similarity=0.246  Sum_probs=101.2

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-----CCcccceeeEEEeCCeEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIH-----HVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~l  102 (148)
                      .++|.+.+.||+|+||.||+|.. .++..+|+|++............|+.++..++     ||||+++++++...+..++
T Consensus        34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~l  113 (360)
T 3llt_A           34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCL  113 (360)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEE
T ss_pred             cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEE
Confidence            46899999999999999999996 47889999999764444556778999988886     9999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||++ +++|.+++...  ....+++..+..++.|++.||+|||++
T Consensus       114 v~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~  156 (360)
T 3llt_A          114 IFEPL-GPSLYEIITRN--NYNGFHIEDIKLYCIEILKALNYLRKM  156 (360)
T ss_dssp             EECCC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEcCC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999 88999988542  234589999999999999999999974

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.83  E-value=3.9e-20  Score=129.69  Aligned_cols=118  Identities=25%  Similarity=0.407  Sum_probs=103.4

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcC-CCCcccceeeEEEe------CCeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSE------GSKR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~------~~~~  100 (148)
                      .++|.+.+.||+|+||.||.|.. .++..+|+|++.........+.+|+.++..+ +||||+++++++..      .+..
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~  102 (326)
T 2x7f_A           23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL  102 (326)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceE
Confidence            45899999999999999999996 4788999999987666677889999999998 79999999999977      4678


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|||+.+|+|.+++...  ....+++..++.++.|++.||.|||++
T Consensus       103 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (326)
T 2x7f_A          103 WLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH  148 (326)
T ss_dssp             EEEEECCTTEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEcCCCCcHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999999998542  235689999999999999999999974

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.83  E-value=2.9e-20  Score=131.50  Aligned_cols=116  Identities=13%  Similarity=0.142  Sum_probs=101.0

Q ss_pred             hhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCC--CcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHH--VNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~l  102 (148)
                      ....|.+.+.||+|+||.||++...++..+|+|.+.......   ..+.+|+.++..++|  |||+++++++...+..++
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l   86 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM   86 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence            356799999999999999999998778999999997655443   457899999999976  999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||| +.+++|.+++.    ....+++..+..++.|++.||.|||++
T Consensus        87 v~e-~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~al~~lH~~  127 (343)
T 3dbq_A           87 VME-CGNIDLNSWLK----KKKSIDPWERKSYWKNMLEAVHTIHQH  127 (343)
T ss_dssp             EEC-CCSEEHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEe-CCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999 56779999983    345689999999999999999999974

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.83  E-value=1.4e-20  Score=132.88  Aligned_cols=117  Identities=17%  Similarity=0.228  Sum_probs=101.3

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---------HHHHHHHHHHHhcCCCCcccceeeEEEeC
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---------AVEFINEVSTIGRIHHVNVVQLLGFYSEG   97 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   97 (148)
                      ..++|.+.+.||+|+||.||+|.. .++..+|+|++......         ...+.+|+.++..++||||+++++++...
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence            346899999999999999999985 47889999999764321         22467899999999999999999999999


Q ss_pred             CeEEEEEeccCCC-ChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNG-SLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +..+++|||+.+| +|.+++    .....+++..++.++.|++.||.|||++
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~----~~~~~l~~~~~~~i~~qi~~~L~~LH~~  149 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFI----DRHPRLDEPLASYIFRQLVSAVGYLRLK  149 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHH----HTCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEEEEEeCCCCccHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999776 999988    3445689999999999999999999964

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.83  E-value=4.6e-20  Score=127.48  Aligned_cols=114  Identities=24%  Similarity=0.333  Sum_probs=97.6

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEe----CCeEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSE----GSKRAL  102 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~l  102 (148)
                      .|.+.+.||+|+||.||+|.. .++..+|+|.+......   ...+.+|+.++..++||||+++++++..    ....++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            478889999999999999986 46888999998764433   3447899999999999999999999865    456899


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+++++|.+++.    ....+++..++.++.|++.||.|||++
T Consensus       107 v~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~  148 (290)
T 1t4h_A          107 VTELMTSGTLKTYLK----RFKVMKIKVLRSWCRQILKGLQFLHTR  148 (290)
T ss_dssp             EEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             EEEecCCCCHHHHHH----HccCCCHHHHHHHHHHHHHHHHHHHcC
Confidence            999999999999983    335689999999999999999999974

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.83  E-value=8.4e-21  Score=138.57  Aligned_cols=116  Identities=22%  Similarity=0.279  Sum_probs=94.0

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCC----CcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|.+.+.||+|+||.||.|.. .++..+|+|++...    ......+.+|+.++..++||||+++++++...+..++
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l  225 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF  225 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence            346799999999999999999995 47889999998652    1223446789999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ||||+++|+|.+++    .....+++..+..++.|++.||+|||+
T Consensus       226 v~e~~~~~~L~~~l----~~~~~~~~~~~~~~~~qi~~aL~~LH~  266 (446)
T 4ejn_A          226 VMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHS  266 (446)
T ss_dssp             EECCCSSCBHHHHH----HHHSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeeCCCCcHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999888    334568999999999999999999996

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.83  E-value=8.5e-21  Score=133.96  Aligned_cols=120  Identities=19%  Similarity=0.244  Sum_probs=99.2

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCC------CcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS------NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      .++|.+.+.||+|+||.||.|.. .++..+|+|++...      ......+.+|+.++..++||||+++++++.+.+..+
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  104 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC  104 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence            34799999999999999999986 47889999998542      222356889999999999999999999999999999


Q ss_pred             EEEeccCCCChhhcccccCC------------------------------------CCCCCCHHHHHHHHHHHHHHHhhh
Q 041447          102 LVYEYMPNGSLDRHIFPNEG------------------------------------RGKSFSWEKLHEVALGTARGIEYL  145 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~------------------------------------~~~~~~~~~~~~i~~qi~~~l~~l  145 (148)
                      +||||+++|+|.+++.....                                    ....+++..++.++.|++.||.||
T Consensus       105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L  184 (345)
T 3hko_A          105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL  184 (345)
T ss_dssp             EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence            99999999999998842100                                    022346788899999999999999


Q ss_pred             hcC
Q 041447          146 HNG  148 (148)
Q Consensus       146 H~~  148 (148)
                      |++
T Consensus       185 H~~  187 (345)
T 3hko_A          185 HNQ  187 (345)
T ss_dssp             HHT
T ss_pred             HHC
Confidence            964

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.83  E-value=5.8e-20  Score=126.86  Aligned_cols=117  Identities=21%  Similarity=0.332  Sum_probs=98.4

Q ss_pred             hhcCceeec-ccccccceEEEEEEec---CCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           28 LDSGLDLTW-SSGKDGFGSVYKGQLH---TGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        28 ~~~~~~~~~-~lg~g~~~~v~~~~~~---~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      ..++|.+.+ .||+|+||.||.|...   ++..+|+|++.....  ..+.+.+|+.++..++||||+++++++ ..+..+
T Consensus         7 ~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~   85 (287)
T 1u59_A            7 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM   85 (287)
T ss_dssp             CGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEE
T ss_pred             cHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcE
Confidence            456777777 9999999999999842   577899999976432  234588999999999999999999998 556689


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|||+.+++|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        86 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~  129 (287)
T 1u59_A           86 LVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK  129 (287)
T ss_dssp             EEEECCTTEEHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeCCCCCHHHHHHh---CCccCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999998842   345689999999999999999999974

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.83  E-value=6.6e-20  Score=130.78  Aligned_cols=116  Identities=19%  Similarity=0.214  Sum_probs=100.9

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC---------HHHHHHHHHHHhcC-CCCcccceeeEEEeC
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS---------AVEFINEVSTIGRI-HHVNVVQLLGFYSEG   97 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~---------~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~   97 (148)
                      .++|.+.+.||+|+||.||+|... +|..||+|++......         ...+.+|+.++..+ +||||+++++++...
T Consensus        93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  172 (365)
T 2y7j_A           93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS  172 (365)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred             hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence            457999999999999999999964 7999999998764421         23467899999998 799999999999999


Q ss_pred             CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +..++||||+++++|.+++.    ....+++..+..++.|++.||.|||++
T Consensus       173 ~~~~lv~e~~~g~~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~~LH~~  219 (365)
T 2y7j_A          173 SFMFLVFDLMRKGELFDYLT----EKVALSEKETRSIMRSLLEAVSFLHAN  219 (365)
T ss_dssp             SEEEEEECCCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEEEEEeCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999883    335689999999999999999999964

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.83  E-value=2.3e-20  Score=131.32  Aligned_cols=116  Identities=20%  Similarity=0.249  Sum_probs=100.3

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEEe
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ...+|.+.+.||+|+||.||.|.. .++..+|+|++.... ....+.+|+.++..+ +||||+++++++...+..++|||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            346899999999999999999995 578899999986543 234578999999999 89999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+ +++|.+++...   ...+++..++.++.|++.||+|||++
T Consensus        86 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~  124 (330)
T 2izr_A           86 LL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK  124 (330)
T ss_dssp             CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99 88999988432   35689999999999999999999974

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.83  E-value=4e-20  Score=129.87  Aligned_cols=117  Identities=27%  Similarity=0.397  Sum_probs=99.9

Q ss_pred             hcCceeecccccccceEEEEEEe-----cCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEE--eCCeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-----HTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYS--EGSKR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~  100 (148)
                      .++|++.+.||+|+||.||+|..     .++..+|+|++...... .+.+.+|+.++..++||||+++++++.  ..+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            46899999999999999999983     36789999999765433 345889999999999999999999886  45668


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||||+++++|.+++...   ...+++..++.++.|++.||.|||++
T Consensus       102 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~  146 (327)
T 3lxl_A          102 RLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR  146 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999998432   24589999999999999999999974

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.83  E-value=4.4e-20  Score=130.14  Aligned_cols=120  Identities=31%  Similarity=0.484  Sum_probs=100.8

Q ss_pred             HhhhcCceeecccccccceEEEEEEec-C----CCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCC
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH-T----GGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGS   98 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~-~----~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   98 (148)
                      ++..++|.+.+.||+|+||.||+|... +    +..+|+|.+......  ...+.+|+.++..++||||+++++++...+
T Consensus        40 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  119 (333)
T 1mqb_A           40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK  119 (333)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             cCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC
Confidence            344568899999999999999999853 2    235999998764332  335789999999999999999999999999


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..++||||+++|+|.+++..   ....+++..++.++.|++.||.|||++
T Consensus       120 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~  166 (333)
T 1mqb_A          120 PMMIITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLANM  166 (333)
T ss_dssp             SEEEEEECCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999843   235689999999999999999999974

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.82  E-value=1.3e-19  Score=125.98  Aligned_cols=131  Identities=34%  Similarity=0.561  Sum_probs=107.0

Q ss_pred             CCCCCcHHHHHHhhhcCcee------ecccccccceEEEEEEecCCCEEEEEEccCCCc-----CHHHHHHHHHHHhcCC
Q 041447           15 SVDNPSYEDLRKLLDSGLDL------TWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNF-----SAVEFINEVSTIGRIH   83 (148)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~------~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~-----~~~~~~~e~~~l~~l~   83 (148)
                      ....+++.++..+.. +|..      .+.||+|+||.||+|.. ++..+|+|.+.....     ....+.+|+.++..++
T Consensus        11 ~~~~~~~~~l~~~~~-~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~   88 (307)
T 2nru_A           11 RFHSFSFYELKNVTN-NFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ   88 (307)
T ss_dssp             CCEECCHHHHHHHTT-TTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred             CCCcccHHHHHHHHc-ccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence            445567777777754 3443      38899999999999987 478999999865321     1345889999999999


Q ss_pred             CCcccceeeEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           84 HVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        84 ~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+++++++...+..+++|||+++++|.+++... .....+++..++.++.|++.||.|||++
T Consensus        89 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~  152 (307)
T 2nru_A           89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSWHMRCKIAQGAANGINFLHEN  152 (307)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTG-GGCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999988432 2235689999999999999999999974

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.82  E-value=4.1e-20  Score=129.45  Aligned_cols=122  Identities=25%  Similarity=0.412  Sum_probs=92.6

Q ss_pred             hhhcCceeecccccccceEEEEEEec-CC---CEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCe
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH-TG---GLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~---~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   99 (148)
                      +..++|.+.+.||+|+||.||+|... ++   ..+|+|.+.....   ....+.+|+.++..++||||+++++++.....
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   99 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA   99 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence            34568999999999999999999853 23   2799999976432   23458899999999999999999999987655


Q ss_pred             E------EEEEeccCCCChhhcccccC--CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 R------ALVYEYMPNGSLDRHIFPNE--GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~------~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .      +++|||+.+|+|.+++....  .....+++..++.++.|++.||.|||++
T Consensus       100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~  156 (323)
T 3qup_A          100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR  156 (323)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC
Confidence            4      89999999999999885432  1223589999999999999999999974

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.82  E-value=5.3e-20  Score=129.23  Aligned_cols=122  Identities=27%  Similarity=0.408  Sum_probs=100.6

Q ss_pred             HHHhhhcCceeecccccccceEEEEEEe-----cCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeC
Q 041447           24 LRKLLDSGLDLTWSSGKDGFGSVYKGQL-----HTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEG   97 (148)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   97 (148)
                      ......++|++.+.||+|+||.||.+..     .++..+|+|.+...... ...+.+|+.++..++||||+++++++...
T Consensus        35 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  114 (326)
T 2w1i_A           35 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA  114 (326)
T ss_dssp             --CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-
T ss_pred             ccccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec
Confidence            3445567899999999999999999983     36889999998764432 34588999999999999999999988654


Q ss_pred             --CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 --SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                        ...+++|||+++++|.+++...   ...+++..++.++.|++.||.|||++
T Consensus       115 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~  164 (326)
T 2w1i_A          115 GRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK  164 (326)
T ss_dssp             ---CCEEEECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCceEEEEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence              3689999999999999998432   34589999999999999999999964

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.82  E-value=7.7e-20  Score=131.54  Aligned_cols=115  Identities=13%  Similarity=0.143  Sum_probs=99.4

Q ss_pred             hcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCC--CCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---AVEFINEVSTIGRIH--HVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~lv  103 (148)
                      ..+|.+.+.||+|+||.||++...++..+|+|++......   ...+.+|+.++..++  ||||+++++++...+..++|
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  134 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  134 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence            3459999999999999999999777899999999765443   245789999999996  59999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      || +.+++|.+++.    ....+++..+..++.||+.||.|||++
T Consensus       135 ~E-~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~lH~~  174 (390)
T 2zmd_A          135 ME-CGNIDLNSWLK----KKKSIDPWERKSYWKNMLEAVHTIHQH  174 (390)
T ss_dssp             EE-CCSEEHHHHHH----HCSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             Ee-cCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99 56789999983    334689999999999999999999974

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=1.6e-20  Score=133.44  Aligned_cols=116  Identities=21%  Similarity=0.271  Sum_probs=100.1

Q ss_pred             hcCceeecccccccceEEEEEEe----cCCCEEEEEEccCCC-----cCHHHHHHHHHHHhcC-CCCcccceeeEEEeCC
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL----HTGGLIAVKMLENSN-----FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGS   98 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~----~~~~~~avk~~~~~~-----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~   98 (148)
                      .++|.+.+.||+|+||.||+++.    .++..+|+|+++...     .....+.+|+.++..+ +||||+++++++...+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            46899999999999999999986    368899999986532     2334567888899988 6999999999999999


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..++||||+.+|+|.+++.    ....+++..+..++.|++.||.|||++
T Consensus       133 ~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~  178 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLS----QRERFTEHEVQIYVGEIVLALEHLHKL  178 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEeecCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999999999983    334689999999999999999999964

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.82  E-value=2.2e-21  Score=136.76  Aligned_cols=114  Identities=14%  Similarity=0.118  Sum_probs=90.8

Q ss_pred             hhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCc---------CHHHHHHHHHHHhcCC---------CCccc
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNF---------SAVEFINEVSTIGRIH---------HVNVV   88 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~---------~~~~~~~e~~~l~~l~---------~~~i~   88 (148)
                      +..++|.+.+.||+|+||.||+|+. ++..+|+|++.....         ....+.+|+.+++.++         ||||+
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv   95 (336)
T 2vuw_A           17 LPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI   95 (336)
T ss_dssp             SCHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred             cccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence            3456799999999999999999988 588999999976432         1256788888888775         66666


Q ss_pred             ceeeEE-----------------Ee-------------CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHH
Q 041447           89 QLLGFY-----------------SE-------------GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGT  138 (148)
Q Consensus        89 ~~~~~~-----------------~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi  138 (148)
                      ++.+.+                 .+             .+..++||||+.+|++.+.+.    . ..+++..+..++.|+
T Consensus        96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~----~-~~~~~~~~~~i~~qi  170 (336)
T 2vuw_A           96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR----T-KLSSLATAKSILHQL  170 (336)
T ss_dssp             CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT----T-TCCCHHHHHHHHHHH
T ss_pred             hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH----h-cCCCHHHHHHHHHHH
Confidence            555543                 32             678999999999997766662    1 457999999999999


Q ss_pred             HHHHhhhh
Q 041447          139 ARGIEYLH  146 (148)
Q Consensus       139 ~~~l~~lH  146 (148)
                      +.||+|||
T Consensus       171 ~~aL~~lH  178 (336)
T 2vuw_A          171 TASLAVAE  178 (336)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999999

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.82  E-value=1.7e-20  Score=131.92  Aligned_cols=127  Identities=22%  Similarity=0.348  Sum_probs=104.5

Q ss_pred             HHHHHhhhcCceeecccccccceEEEEEEec-CC-----CEEEEEEccCCCc--CHHHHHHHHHHHhcC-CCCcccceee
Q 041447           22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLH-TG-----GLIAVKMLENSNF--SAVEFINEVSTIGRI-HHVNVVQLLG   92 (148)
Q Consensus        22 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~-----~~~avk~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~   92 (148)
                      ....++..++|.+.+.||+|+||.||.|... ++     ..+|+|.+.....  ....+.+|+.++..+ +||||+++++
T Consensus        38 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~  117 (333)
T 2i1m_A           38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG  117 (333)
T ss_dssp             CGGGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence            3345667789999999999999999999853 22     4799999876433  234588999999999 8999999999


Q ss_pred             EEEeCCeEEEEEeccCCCChhhcccccCC----------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           93 FYSEGSKRALVYEYMPNGSLDRHIFPNEG----------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        93 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++...+..+++|||+++|+|.+++.....          ....+++..++.++.|++.||.|||++
T Consensus       118 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  183 (333)
T 2i1m_A          118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK  183 (333)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999998854211          134579999999999999999999974

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.82  E-value=1.4e-19  Score=136.75  Aligned_cols=115  Identities=21%  Similarity=0.339  Sum_probs=96.4

Q ss_pred             cCceeec-ccccccceEEEEEEec---CCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           30 SGLDLTW-SSGKDGFGSVYKGQLH---TGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        30 ~~~~~~~-~lg~g~~~~v~~~~~~---~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      +++.+.+ .||+|+||.||+|...   ++..||+|+++....  ..+.+.+|+.+|..++||||+++++++.. +..++|
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv  413 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV  413 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence            3455555 7999999999999853   456799999976432  45678999999999999999999999876 568999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+.+|+|.+++..   ....+++..+..++.|++.||+|||++
T Consensus       414 ~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~  455 (613)
T 2ozo_A          414 MEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK  455 (613)
T ss_dssp             EECCTTCBHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999998843   345689999999999999999999974

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.82  E-value=1.6e-19  Score=125.09  Aligned_cols=116  Identities=21%  Similarity=0.358  Sum_probs=97.4

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++|++.+.||+|+||.||.|... +++.+|+|.+......   ...+.+|+.++..++||||+++++++...+..+++||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            57999999999999999999964 7899999998664332   3568899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+. ++|.+++...  ....+++..++.++.|++.||.|||++
T Consensus        83 ~~~-~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~  122 (299)
T 2r3i_A           83 FLH-QDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCHSH  122 (299)
T ss_dssp             CCS-EEHHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccc-CCHHHHHHhh--hccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            998 4999888442  224589999999999999999999974

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.82  E-value=6.5e-20  Score=126.83  Aligned_cols=116  Identities=23%  Similarity=0.358  Sum_probs=96.5

Q ss_pred             hhcCceeec-ccccccceEEEEEEe---cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           28 LDSGLDLTW-SSGKDGFGSVYKGQL---HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        28 ~~~~~~~~~-~lg~g~~~~v~~~~~---~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      ..++|.+.+ .||+|+||.||+|..   .++..+|+|++......   ...+.+|+.++..++||||+++++++ ..+..
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~   92 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW   92 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence            456788888 999999999999963   35678999998764332   34588999999999999999999998 56778


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|||+++++|.+++.    ....+++..++.++.|++.||.|||++
T Consensus        93 ~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~LH~~  136 (291)
T 1xbb_A           93 MLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES  136 (291)
T ss_dssp             EEEEECCTTEEHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEeCCCCCHHHHHH----hCcCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999983    345689999999999999999999974

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.82  E-value=6.4e-20  Score=126.28  Aligned_cols=119  Identities=21%  Similarity=0.323  Sum_probs=98.8

Q ss_pred             HhhhcCceeecccccccceEEEEEEec----CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~----~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   99 (148)
                      ++..++|++.+.||+|+||.||+|...    .+..+|+|.+......  .+.+.+|+..+..++||||+++++++. .+.
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~   89 (281)
T 1mp8_A           11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP   89 (281)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred             EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCc
Confidence            345678999999999999999999853    3456999988654322  345889999999999999999999874 567


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++||||+.+++|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        90 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~  135 (281)
T 1mp8_A           90 VWIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLSTALAYLESK  135 (281)
T ss_dssp             CEEEEECCTTEEHHHHHHH---TTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cEEEEecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            8899999999999999843   234689999999999999999999974

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.82  E-value=7.3e-20  Score=125.81  Aligned_cols=116  Identities=22%  Similarity=0.392  Sum_probs=98.9

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEe----------
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE----------   96 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----------   96 (148)
                      ...+|++.+.||+|+||.||.+... +++.+|+|.+....   ..+.+|+.++..++||||+++++++..          
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   85 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK   85 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence            3457999999999999999999964 78999999997643   456789999999999999999998754          


Q ss_pred             ------CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           97 ------GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        97 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                            ....+++|||+++++|.+++...  ....+++..++.++.|++.||.|||++
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~  141 (284)
T 2a19_B           86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIHSK  141 (284)
T ss_dssp             ---CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence                  34589999999999999998432  235689999999999999999999974

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.82  E-value=5.4e-20  Score=134.63  Aligned_cols=114  Identities=14%  Similarity=0.246  Sum_probs=88.9

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeC-----CeE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEG-----SKR  100 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~  100 (148)
                      ++|.+.+.||+|+||.||+|.. .++..||+|++......   ...+.+|+.++..++||||+++++++...     ...
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            5799999999999999999985 47889999998764333   34578999999999999999999998443     568


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|||++. ++|.+++    .....+++..+..++.||+.||.|||++
T Consensus       133 ~lv~e~~~-~~L~~~~----~~~~~l~~~~~~~~~~qi~~aL~~LH~~  175 (458)
T 3rp9_A          133 YVVLEIAD-SDFKKLF----RTPVYLTELHIKTLLYNLLVGVKYVHSA  175 (458)
T ss_dssp             EEEECCCS-EEHHHHH----HSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeccc-cchhhhc----ccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999985 5999888    3446799999999999999999999974

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.82  E-value=7.6e-20  Score=133.09  Aligned_cols=115  Identities=14%  Similarity=0.234  Sum_probs=99.4

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeC-----Ce
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEG-----SK   99 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~   99 (148)
                      .++|.+.+.||+|+||.||+|.. .++..||+|++......   ...+.+|+.++..++||||+++++++...     +.
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            46899999999999999999996 46889999999764333   34588999999999999999999998765     57


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++||||+.+ +|.+++    .....+++..+..++.||+.||.|||++
T Consensus       105 ~~lv~e~~~~-~L~~~~----~~~~~l~~~~~~~i~~qil~aL~~LH~~  148 (432)
T 3n9x_A          105 LYIVLEIADS-DLKKLF----KTPIFLTEEHIKTILYNLLLGENFIHES  148 (432)
T ss_dssp             EEEEEECCSE-EHHHHH----HSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEecCCc-CHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999875 999988    3446689999999999999999999974

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.82  E-value=1e-19  Score=126.11  Aligned_cols=112  Identities=21%  Similarity=0.328  Sum_probs=93.1

Q ss_pred             hhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhc--CCCCcccceeeEEEe----CCeE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR--IHHVNVVQLLGFYSE----GSKR  100 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~--l~~~~i~~~~~~~~~----~~~~  100 (148)
                      ...++|.+.+.||+|+||.||+|.. ++..+|+|++...  ....+.+|.+++..  ++||||+++++.+..    ....
T Consensus         5 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~   81 (301)
T 3q4u_A            5 TVARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL   81 (301)
T ss_dssp             CCGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             cccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence            4467899999999999999999987 4889999998653  33445566666555  789999999998654    3458


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhh
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH  146 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH  146 (148)
                      +++|||+++|+|.+++.     ...+++..++.++.|++.||.|||
T Consensus        82 ~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH  122 (301)
T 3q4u_A           82 WLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLH  122 (301)
T ss_dssp             EEEECCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEehhhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999982     245899999999999999999999

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.82  E-value=2.3e-19  Score=125.63  Aligned_cols=113  Identities=26%  Similarity=0.353  Sum_probs=96.3

Q ss_pred             CceeecccccccceEEEEEEe-----cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEe--CCeEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-----HTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSE--GSKRA  101 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-----~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~  101 (148)
                      .|++.+.||+|+||.||.+.+     .++..+|+|++......  ...+.+|+.++..++||||+++++++..  ....+
T Consensus        32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  111 (318)
T 3lxp_A           32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ  111 (318)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred             HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence            359999999999999998863     26788999999764322  3458899999999999999999999987  46789


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|||+++|+|.+++..     ..+++..++.++.|++.||.|||++
T Consensus       112 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~  153 (318)
T 3lxp_A          112 LVMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQ  153 (318)
T ss_dssp             EEECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999832     2389999999999999999999974

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.82  E-value=1.4e-19  Score=125.10  Aligned_cols=120  Identities=34%  Similarity=0.579  Sum_probs=98.8

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeCCe
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   99 (148)
                      +..++...+|.+.+.||+|+||.||++...  ..+|+|++.......   ..+.+|+.++..++||||++++++ ...+.
T Consensus        17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~-~~~~~   93 (289)
T 3og7_A           17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STAPQ   93 (289)
T ss_dssp             -CCBCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEE-ECSSS
T ss_pred             CCCccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEee-ccCCc
Confidence            445677789999999999999999999864  359999987655443   448899999999999999999985 45667


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++|||+.+++|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        94 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~lH~~  139 (289)
T 3og7_A           94 LAIVTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLHAK  139 (289)
T ss_dssp             CEEEEECCCEEEHHHHHTT---C---CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cEEEEEecCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            8999999999999998843   345689999999999999999999974

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=7.8e-20  Score=128.52  Aligned_cols=117  Identities=20%  Similarity=0.391  Sum_probs=96.7

Q ss_pred             HHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcC--CCCcccceeeEEEeC----
Q 041447           24 LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRI--HHVNVVQLLGFYSEG----   97 (148)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l--~~~~i~~~~~~~~~~----   97 (148)
                      ......++|++.+.||+|+||.||+|... +..+|+|++....  .....+|.+++...  +||||+++++++...    
T Consensus        31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~  107 (337)
T 3mdy_A           31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSW  107 (337)
T ss_dssp             HHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred             cccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence            34445568999999999999999999876 8899999986432  33445555555554  899999999999887    


Q ss_pred             CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ...+++|||+++|+|.+++..     ..+++..++.++.|++.||.|||++
T Consensus       108 ~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~  153 (337)
T 3mdy_A          108 TQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTE  153 (337)
T ss_dssp             CEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSC
T ss_pred             CceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            789999999999999999832     3589999999999999999999963

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.82  E-value=8.1e-20  Score=127.63  Aligned_cols=119  Identities=22%  Similarity=0.231  Sum_probs=96.8

Q ss_pred             HhhhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHH---HHHHHHHHHhcC-CCCcccceeeEEEeCCeE
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAV---EFINEVSTIGRI-HHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~---~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~  100 (148)
                      ....++|++.+.||+|+||.||+|... +++.+|+|++........   ....|+..+..+ +||||+++++++...+..
T Consensus        53 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~  132 (311)
T 3p1a_A           53 SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGIL  132 (311)
T ss_dssp             CHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             chhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEE
Confidence            334467999999999999999999964 789999999866444332   344555555544 899999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||||+ +++|.+++...   ...+++..++.++.|++.||+|||++
T Consensus       133 ~lv~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~  176 (311)
T 3p1a_A          133 YLQTELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ  176 (311)
T ss_dssp             EEEEECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999 56898887432   35689999999999999999999964

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.82  E-value=1.2e-19  Score=128.76  Aligned_cols=115  Identities=24%  Similarity=0.354  Sum_probs=98.8

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH----HHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA----VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      +.|...+.||+|+||.||+|.. .++..+|+|++.......    ..+.+|+.++..++||||+++++++...+..++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4588999999999999999995 578899999997654432    34789999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+ ++.+++..   ....+++..++.++.|++.||.|||++
T Consensus       134 e~~~g-~l~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~  173 (348)
T 1u5q_A          134 EYCLG-SASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH  173 (348)
T ss_dssp             ECCSE-EHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ecCCC-CHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99974 78777632   235689999999999999999999974

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.82  E-value=1.8e-19  Score=125.73  Aligned_cols=121  Identities=31%  Similarity=0.407  Sum_probs=96.0

Q ss_pred             hhcCceeecccccccceEEEEEEec----CCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeCC--
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEGS--   98 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~----~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--   98 (148)
                      ..++|.+.+.||+|+||.||+|...    ++..+|+|.+.......   ..+.+|+.++..++||||+++++++...+  
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  111 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ  111 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence            3468999999999999999999743    34589999997654443   34789999999999999999999987654  


Q ss_pred             ---eEEEEEeccCCCChhhcccccC--CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 ---KRALVYEYMPNGSLDRHIFPNE--GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ---~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                         ..+++|||+++|+|.+++....  .....+++..++.++.|++.||.|||++
T Consensus       112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  166 (313)
T 3brb_A          112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR  166 (313)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC
Confidence               3599999999999999874322  2345689999999999999999999974

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.82  E-value=6.4e-20  Score=128.38  Aligned_cols=123  Identities=25%  Similarity=0.394  Sum_probs=102.8

Q ss_pred             HhhhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeC
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEG   97 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   97 (148)
                      ++..++|.+.+.||+|+||.||+|...      ++..+|+|.+......  ...+.+|+.++..++||||+++++++...
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  100 (322)
T 1p4o_A           21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG  100 (322)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence            455678999999999999999999743      4678999999764332  23478999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChhhcccccC------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNE------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +..+++|||+.+|+|.+++....      .....+++..++.++.|++.||.|||++
T Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  157 (322)
T 1p4o_A          101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN  157 (322)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999999999885321      1124578999999999999999999974

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.82  E-value=5e-20  Score=127.07  Aligned_cols=120  Identities=19%  Similarity=0.265  Sum_probs=96.0

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHH--H-HHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAV--E-FINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~--~-~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      +..++|++.+.||+|+||.||+|.. .+++.+|+|++........  . +..+...+..++||||+++++++...+..++
T Consensus         4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l   83 (290)
T 3fme_A            4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI   83 (290)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred             ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence            4457899999999999999999996 5788999999976433222  2 3344445778899999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +|||+.+ +|.+++.........+++..++.++.|++.||.|||+
T Consensus        84 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  127 (290)
T 3fme_A           84 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS  127 (290)
T ss_dssp             EEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            9999985 8877764322345679999999999999999999996

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.81  E-value=2.4e-19  Score=123.94  Aligned_cols=116  Identities=23%  Similarity=0.283  Sum_probs=97.3

Q ss_pred             ceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           32 LDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.....||+|+||.||.|.. .++..+|+|.+..... ....+.+|+.++..++||||+++++++...+..+++|||+++
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  103 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG  103 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence            33445899999999999995 5788999999876443 345688999999999999999999999999999999999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|.+++.... ....+++..++.++.|++.||.|||++
T Consensus       104 ~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~  141 (295)
T 2clq_A          104 GSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN  141 (295)
T ss_dssp             EEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC
Confidence            99999885431 234567999999999999999999974

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.81  E-value=9.4e-20  Score=130.65  Aligned_cols=117  Identities=18%  Similarity=0.277  Sum_probs=94.7

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeC---------
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG---------   97 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---------   97 (148)
                      ...+|.+.+.||+|+||.||.|.. .++..+|+|++......   ..+|+.+++.++||||+++++++...         
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~---~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~   81 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY---KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ   81 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS---CCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch---HHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence            356899999999999999999985 57899999998654322   23799999999999999999998543         


Q ss_pred             -----------------------------CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 -----------------------------SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 -----------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                                                   ...++||||+++ +|.+.+.........+++..++.++.|++.||.|||++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  160 (383)
T 3eb0_A           82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL  160 (383)
T ss_dssp             ----------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence                                         348899999985 87776643223456799999999999999999999974

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.81  E-value=3.4e-20  Score=130.25  Aligned_cols=115  Identities=23%  Similarity=0.353  Sum_probs=96.5

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCH--HHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSA--VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++|.+.+.||+|+||.||+|... ++..+|+|++.......  ..+.+|+.++..++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            47999999999999999999964 78899999987543221  1355799999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+ +|.+++..   ....+++..+..++.|++.||.|||++
T Consensus        82 ~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~  119 (324)
T 3mtl_A           82 LDK-DLKQYLDD---CGNIINMHNVKLFLFQLLRGLAYCHRQ  119 (324)
T ss_dssp             CSE-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            985 88888743   235689999999999999999999964

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.81  E-value=3.5e-19  Score=125.19  Aligned_cols=128  Identities=21%  Similarity=0.298  Sum_probs=103.6

Q ss_pred             CCcHHHHHHhhhcCceee-cccccccceEEEEEEec-CCCEEEEEEccCCCc---CHHHHHHHHHHHhcCC-CCccccee
Q 041447           18 NPSYEDLRKLLDSGLDLT-WSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNF---SAVEFINEVSTIGRIH-HVNVVQLL   91 (148)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~-~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~-~~~i~~~~   91 (148)
                      +..+.....+ .+.|.+. +.||+|+||.||+|... ++..+|+|++.....   ....+.+|+.++..+. ||||++++
T Consensus        17 n~~~~~~~~~-~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~   95 (327)
T 3lm5_A           17 NLYFQSMENF-NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH   95 (327)
T ss_dssp             CCCSBCHHHH-HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred             hhHHHHHHhh-hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence            3334444433 3356666 89999999999999964 789999999876332   3456889999999985 69999999


Q ss_pred             eEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           92 GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        92 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++...+..++||||+.+|+|.+++..  .....+++..++.++.|++.||+|||++
T Consensus        96 ~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~i~~ql~~~L~~LH~~  150 (327)
T 3lm5_A           96 EVYENTSEIILILEYAAGGEIFSLCLP--ELAEMVSENDVIRLIKQILEGVYYLHQN  150 (327)
T ss_dssp             EEEECSSEEEEEEECCTTEEGGGGGSS--CC-CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeCCeEEEEEEecCCCcHHHHHHH--hcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999999999998843  2245689999999999999999999964

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.81  E-value=2.9e-19  Score=125.38  Aligned_cols=111  Identities=14%  Similarity=0.280  Sum_probs=98.2

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcccceeeEEEe--CCeEEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVNVVQLLGFYSE--GSKRALVY  104 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~--~~~~~lv~  104 (148)
                      .++|++.+.||+|+||.||.|.. .++..+|+|++..  .....+.+|+.++..++ ||||+++++++..  ....+++|
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP--VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS--CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc--cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            45799999999999999999985 5788999999874  34567889999999997 9999999999987  66789999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+++|.+++       ..+++..+..++.|++.||.|||++
T Consensus       113 e~~~~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~  149 (330)
T 3nsz_A          113 EHVNNTDFKQLY-------QTLTDYDIRFYMYEILKALDYCHSM  149 (330)
T ss_dssp             ECCCCCCHHHHG-------GGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eccCchhHHHHH-------HhCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999887       2378999999999999999999974

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.81  E-value=2.8e-20  Score=127.87  Aligned_cols=119  Identities=32%  Similarity=0.456  Sum_probs=99.2

Q ss_pred             HhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeC-CeEEEEE
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG-SKRALVY  104 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~lv~  104 (148)
                      .+..++|++.+.||+|+||.||.+... +..+|+|.+.... ..+.+.+|+.++..++||||+++++++... +..+++|
T Consensus        17 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~   94 (278)
T 1byg_A           17 ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   94 (278)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             cCChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence            455678999999999999999999875 8899999987543 456788999999999999999999987554 5789999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++++|.+++...  ....+++..++.++.|++.||.|||++
T Consensus        95 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~  136 (278)
T 1byg_A           95 EYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN  136 (278)
T ss_dssp             CCCTTEEHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ecCCCCCHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999988432  122378999999999999999999974

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.81  E-value=2e-19  Score=127.86  Aligned_cols=117  Identities=21%  Similarity=0.265  Sum_probs=98.1

Q ss_pred             hhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC------------HHHHHHHHHHHhcCCCCcccceeeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS------------AVEFINEVSTIGRIHHVNVVQLLGFYS   95 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~------------~~~~~~e~~~l~~l~~~~i~~~~~~~~   95 (148)
                      ..++|.+.+.||+|+||.||.|...++..+|+|.+......            ...+.+|+.++..++||||+++++++.
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   99 (362)
T 3pg1_A           20 MQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV   99 (362)
T ss_dssp             TTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred             hccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence            34689999999999999999999777999999998552221            156889999999999999999999985


Q ss_pred             e-----CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           96 E-----GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        96 ~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .     ....++||||+.+ +|.+.+.   .....+++..+..++.|++.||.|||++
T Consensus       100 ~~~~~~~~~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~  153 (362)
T 3pg1_A          100 HFEEPAMHKLYLVTELMRT-DLAQVIH---DQRIVISPQHIQYFMYHILLGLHVLHEA  153 (362)
T ss_dssp             ECCTTTCCEEEEEEECCSE-EHHHHHH---CTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eccCCCcceEEEEEccCCC-CHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4     3368999999985 8888774   2345689999999999999999999974

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.81  E-value=7.6e-20  Score=127.55  Aligned_cols=126  Identities=25%  Similarity=0.368  Sum_probs=102.4

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEe------cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCcccceeeE
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQLLGF   93 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~~~~   93 (148)
                      ..+....++|.+.+.||+|+||.||+|..      .++..+|+|++......  ...+.+|+.++..+ +||||++++++
T Consensus        20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~   99 (316)
T 2xir_A           20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA   99 (316)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEE
Confidence            34456678999999999999999999973      25678999998764332  23588999999999 69999999999


Q ss_pred             EEeCC-eEEEEEeccCCCChhhcccccCCC------------CCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           94 YSEGS-KRALVYEYMPNGSLDRHIFPNEGR------------GKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        94 ~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~------------~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +...+ ..+++|||+++|+|.+++......            ...+++..++.++.|++.||.|||++
T Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~  167 (316)
T 2xir_A          100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR  167 (316)
T ss_dssp             ECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC
Confidence            87654 589999999999999998543211            12378999999999999999999974

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.81  E-value=1.4e-19  Score=126.27  Aligned_cols=115  Identities=26%  Similarity=0.392  Sum_probs=97.3

Q ss_pred             hhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      ..++|++.+.||+|+||.||++... ++.+|+|.+... .....+.+|+.++..++||||+++++++.  +..++||||+
T Consensus         6 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~   81 (307)
T 2eva_A            6 DYKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA   81 (307)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred             CHhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence            3467999999999999999999875 778999998643 23456889999999999999999999876  4478999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ++|+|.+++.... ....++...++.++.|++.||.|||+
T Consensus        82 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~  120 (307)
T 2eva_A           82 EGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHS  120 (307)
T ss_dssp             TTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999985432 22347899999999999999999997

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=1.3e-19  Score=128.32  Aligned_cols=116  Identities=23%  Similarity=0.369  Sum_probs=94.2

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC------HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS------AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      .++|.+.+.||+|+||.||.|.. .++..+|+|.+......      ...+.+|+.++..++||||+++++++...+..+
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   88 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS   88 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence            45799999999999999999996 46899999998753321      235779999999999999999999999999999


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||||+.+ +|.+++..   ....+++..+..++.|++.||.|||++
T Consensus        89 lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~  131 (346)
T 1ua2_A           89 LVFDFMET-DLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQH  131 (346)
T ss_dssp             EEEECCSE-EHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCCC-CHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999986 88887732   335688999999999999999999974

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.81  E-value=1.9e-19  Score=129.91  Aligned_cols=113  Identities=21%  Similarity=0.223  Sum_probs=92.5

Q ss_pred             cCceee-cccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHh-cCCCCcccceeeEEEe----CCeEEE
Q 041447           30 SGLDLT-WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIG-RIHHVNVVQLLGFYSE----GSKRAL  102 (148)
Q Consensus        30 ~~~~~~-~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~-~l~~~~i~~~~~~~~~----~~~~~l  102 (148)
                      ++|.+. +.||+|+||.||.+.. .++..+|+|++..    .....+|+.++. ..+||||+++++++..    .+..++
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l  136 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI  136 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence            467766 6899999999999996 4788999999863    245677887764 4579999999999875    567899


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+.+|+|.+++...  ....+++..+..++.|++.||.|||++
T Consensus       137 v~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~  180 (400)
T 1nxk_A          137 VMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI  180 (400)
T ss_dssp             EEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeCCCCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999998432  234589999999999999999999964

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.81  E-value=2.2e-19  Score=124.30  Aligned_cols=118  Identities=18%  Similarity=0.268  Sum_probs=101.6

Q ss_pred             HhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEE
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      ....++|.+.+.||+|+||.||+|.. .++..+|+|++.... ....+.+|+..+..+ +|++++.+++++......+++
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   84 (298)
T 1csn_A            6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV   84 (298)
T ss_dssp             CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred             cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence            34567899999999999999999995 578899999886533 334578899999999 799999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+ +++|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        85 ~e~~-~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~  125 (298)
T 1csn_A           85 IDLL-GPSLEDLLDL---CGRKFSVKTVAMAAKQMLARVQSIHEK  125 (298)
T ss_dssp             EECC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEec-CCCHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999 8899999843   234589999999999999999999974

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.81  E-value=1.2e-19  Score=138.38  Aligned_cols=117  Identities=22%  Similarity=0.214  Sum_probs=100.6

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCC----CcCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS----NFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~----~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~  101 (148)
                      ..++|.+.+.||+|+||.||++.. .+++.+|+|++...    .........|..++..+ +||+|+.+++++.+.+.++
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            456899999999999999999996 47889999998652    22344577888888887 6999999999999999999


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||||+.+|+|.+++.    ....+++..+..++.||+.||+|||++
T Consensus       419 lV~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~  461 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQ----QVGRFKEPHAVFYAAEIAIGLFFLQSK  461 (674)
T ss_dssp             EEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeCcCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999983    335689999999999999999999974

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.81  E-value=1.7e-19  Score=127.67  Aligned_cols=117  Identities=17%  Similarity=0.178  Sum_probs=92.1

Q ss_pred             hhhcCceeecccccccceEEEEEEec----CCCEEEEEEccCCCcC------------HHHHHHHHHHHhcCCCCcccce
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLENSNFS------------AVEFINEVSTIGRIHHVNVVQL   90 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~----~~~~~avk~~~~~~~~------------~~~~~~e~~~l~~l~~~~i~~~   90 (148)
                      ...++|.+.+.||+|+||.||+|...    ++..+|+|.+......            ...+.+|+..+..++||||+++
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~  113 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF  113 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence            34568999999999999999999963    5778999998764321            1235677888899999999999


Q ss_pred             eeEEEe----CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           91 LGFYSE----GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        91 ~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++..    ....+++|||+ +++|.+++.    ....+++..++.++.|++.||+|||++
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~  170 (345)
T 2v62_A          114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISG----QNGTFKKSTVLQLGIRMLDVLEYIHEN  170 (345)
T ss_dssp             EEEEEEESSSCEEEEEEEECE-EEEHHHHCB----GGGBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ecccccccCCCcEEEEEEecc-CCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999987    78899999999 899999983    334789999999999999999999974

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.80  E-value=3.4e-19  Score=123.44  Aligned_cols=116  Identities=27%  Similarity=0.357  Sum_probs=95.4

Q ss_pred             cCceeecccccccceEEEEEEec----CCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEE-eCCeEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYS-EGSKRAL  102 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~----~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~l  102 (148)
                      ..|++.+.||+|+||.||+|...    ....+|+|.+.....  ....+.+|+.++..++||||+++++++. ..+..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            46888999999999999999843    223588998875332  2345889999999999999999999864 4567899


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||+.+|+|.+++..   ....+++..++.++.|++.||.|||++
T Consensus       105 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~ql~~~l~~lH~~  147 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASK  147 (298)
T ss_dssp             EEECCTTCBHHHHHHC---TTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeCCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999843   345579999999999999999999974

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.80  E-value=3.5e-20  Score=129.50  Aligned_cols=123  Identities=21%  Similarity=0.307  Sum_probs=103.7

Q ss_pred             HHHHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeC
Q 041447           21 YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEG   97 (148)
Q Consensus        21 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   97 (148)
                      ....+.+..++|++.+.||+|+||.||.|....  .+|+|.+......   ...+.+|+.++..++||||+++++++...
T Consensus        24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~  101 (319)
T 2y4i_B           24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP  101 (319)
T ss_dssp             CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred             ccccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence            345556667899999999999999999998753  4899998764322   23467899999999999999999999999


Q ss_pred             CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +..+++|||+.+++|.+++..   ....+++..++.++.|++.||.|||++
T Consensus       102 ~~~~iv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~  149 (319)
T 2y4i_B          102 PHLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAK  149 (319)
T ss_dssp             SCEEEECBCCCSEEHHHHTTS---SCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEeecccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999832   234689999999999999999999974

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.80  E-value=2.9e-19  Score=125.61  Aligned_cols=118  Identities=24%  Similarity=0.387  Sum_probs=94.7

Q ss_pred             hhhcCceeecccccccceEEEEEEec-CCC----EEEEEEccCCC--cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCe
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH-TGG----LIAVKMLENSN--FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~----~~avk~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   99 (148)
                      +..++|++.+.||+|+||.||+|... ++.    .+|+|.+....  .....+.+|+.++..++||||+++++++.... 
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-   90 (327)
T 3poz_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-   90 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-
T ss_pred             cCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-
Confidence            34568999999999999999999853 344    35888875432  23456889999999999999999999988754 


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++++|++.+|+|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        91 ~~~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~  136 (327)
T 3poz_A           91 VQLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDR  136 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHH---STTSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            7789999999999998843   235689999999999999999999974

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.80  E-value=2.6e-19  Score=136.68  Aligned_cols=115  Identities=20%  Similarity=0.300  Sum_probs=95.9

Q ss_pred             hhcCceeecccccccceEEEEEEec--CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCe----
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH--TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSK----   99 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~----   99 (148)
                      ..++|.+.+.||+|+||.||.+...  +++.||+|.+......  ...+.+|+.++..++||||+++++++...+.    
T Consensus        78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~  157 (681)
T 2pzi_A           78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP  157 (681)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred             eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence            3468999999999999999999964  6889999998654322  2347899999999999999999999987655    


Q ss_pred             -EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 -RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                       .++||||+++++|.+++    ..  .+++..++.++.|++.||.|||++
T Consensus       158 ~~~lv~E~~~g~~L~~~~----~~--~l~~~~~~~~~~qi~~aL~~lH~~  201 (681)
T 2pzi_A          158 VGYIVMEYVGGQSLKRSK----GQ--KLPVAEAIAYLLEILPALSYLHSI  201 (681)
T ss_dssp             EEEEEEECCCCEECC--------C--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eeEEEEEeCCCCcHHHHH----hC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence             79999999999998876    22  689999999999999999999974

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.80  E-value=5.2e-19  Score=125.26  Aligned_cols=116  Identities=22%  Similarity=0.328  Sum_probs=96.9

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEe--------
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSE--------   96 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------   96 (148)
                      .++|.+.+.||+|+||.||.|.. .++..+|+|++......   ...+.+|+.++..++||||+++++++..        
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            35799999999999999999996 57899999998654332   3467899999999999999999999877        


Q ss_pred             CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           97 GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        97 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+..++||||+.+ +|.+.+.   .....+++..++.++.|++.||.|||++
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~---~~~~~~~~~~~~~i~~qi~~~l~~LH~~  143 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLS---NVLVKFTLSEIKRVMQMLLNGLYYIHRN  143 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHH---CTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEEeccCC-CHHHHHh---hccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4568999999986 7776663   2335589999999999999999999974

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.80  E-value=2.9e-20  Score=129.67  Aligned_cols=121  Identities=21%  Similarity=0.261  Sum_probs=91.6

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC-------HHHHHHHHHHHhcC----CCCcccce
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS-------AVEFINEVSTIGRI----HHVNVVQL   90 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~-------~~~~~~e~~~l~~l----~~~~i~~~   90 (148)
                      ...+...++|.+.+.||+|+||.||+|.. .++..+|+|++......       ...+.+|+.++..+    +||||+++
T Consensus        24 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~  103 (312)
T 2iwi_A           24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRL  103 (312)
T ss_dssp             ---------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCE
T ss_pred             cchhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeE
Confidence            34455567899999999999999999985 47889999999764332       12355788888887    89999999


Q ss_pred             eeEEEeCCeEEEEEec-cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           91 LGFYSEGSKRALVYEY-MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        91 ~~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ++++...+..++++|+ +.+++|.+++.    ....+++..++.++.|++.||.|||+
T Consensus       104 ~~~~~~~~~~~~v~e~~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~  157 (312)
T 2iwi_A          104 LDWFETQEGFMLVLERPLPAQDLFDYIT----EKGPLGEGPSRCFFGQVVAAIQHCHS  157 (312)
T ss_dssp             EEEC-----CEEEEECCSSEEEHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCeEEEEEEecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999988999999999 78899999983    33468999999999999999999996

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.80  E-value=4.4e-19  Score=123.18  Aligned_cols=114  Identities=21%  Similarity=0.219  Sum_probs=95.7

Q ss_pred             hcCceee-cccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHH-hcCCCCcccceeeEEEe----CCeEE
Q 041447           29 DSGLDLT-WSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTI-GRIHHVNVVQLLGFYSE----GSKRA  101 (148)
Q Consensus        29 ~~~~~~~-~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~~~~~~----~~~~~  101 (148)
                      .++|.+. +.||+|+||.||.+.. .++..+|+|++..    .....+|+..+ ...+||||+++++++..    ....+
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            3467777 7899999999999996 5788999999864    24567888877 55689999999999876    67789


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|||+++|+|.+++...  ....+++..++.++.|++.||.|||++
T Consensus        92 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~  136 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI  136 (299)
T ss_dssp             EEECCCCSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999998542  234689999999999999999999974

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.80  E-value=5.8e-19  Score=122.95  Aligned_cols=119  Identities=24%  Similarity=0.405  Sum_probs=93.9

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc------CHHHHHHHHHHHhcC---CCCcccceeeEEEe
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF------SAVEFINEVSTIGRI---HHVNVVQLLGFYSE   96 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~------~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~   96 (148)
                      ...++|++.+.||+|+||.||+|.. .+++.+|+|++.....      ......+|+.++..+   +||||+++++++..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~   85 (308)
T 3g33_A            6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT   85 (308)
T ss_dssp             ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred             ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence            4456899999999999999999995 5789999999864221      234566777776666   49999999999987


Q ss_pred             CC-----eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           97 GS-----KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        97 ~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..     ..+++||++.+ +|.+++...  ....+++..++.++.|++.||+|||++
T Consensus        86 ~~~~~~~~~~lv~e~~~~-~L~~~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~  139 (308)
T 3g33_A           86 SRTDREIKVTLVFEHVDQ-DLRTYLDKA--PPPGLPAETIKDLMRQFLRGLDFLHAN  139 (308)
T ss_dssp             CCSSSEEEEEEEEECCCC-BHHHHHHTC--CTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCceeEEEEehhhhc-CHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            55     58899999975 999988432  223489999999999999999999974

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.80  E-value=4.2e-19  Score=123.82  Aligned_cols=114  Identities=21%  Similarity=0.251  Sum_probs=92.0

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEE-----------
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYS-----------   95 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~-----------   95 (148)
                      .++|.+.+.||+|+||.||+|... +++.+|+|.+...... ...+.+|+.++..++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            468999999999999999999964 6889999998764432 345889999999999999999998873           


Q ss_pred             ---eCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           96 ---EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        96 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                         ..+..+++|||+. |+|.+++.     ...+++..++.++.|++.||+|||++
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~  139 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLE-----QGPLLEEHARLFMYQLLRGLKYIHSA  139 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccccCceeEEeeccC-CCHHHHhh-----cCCccHHHHHHHHHHHHHHHHHHHhC
Confidence               3467899999998 59999882     24589999999999999999999974

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=2.2e-19  Score=128.24  Aligned_cols=114  Identities=20%  Similarity=0.313  Sum_probs=91.4

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCC------
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGS------   98 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------   98 (148)
                      .++|.+.+.||+|+||.||.|.. .++..||+|.+......   ...+.+|+.++..++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            45899999999999999999996 57899999998654333   345789999999999999999999987653      


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..++||||+ +++|.+++..     ..+++..+..++.|++.||.|||++
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~  147 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA  147 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            469999999 7799998832     4589999999999999999999974

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=6.3e-19  Score=121.98  Aligned_cols=115  Identities=26%  Similarity=0.330  Sum_probs=94.7

Q ss_pred             CceeecccccccceEEEEEEec-CC---CEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeE-EEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLH-TG---GLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR-ALV  103 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~-~~---~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~-~lv  103 (148)
                      .|...+.||+|+||.||+|... ++   ..+|+|.+......  .+.+.+|+.++..++||||+++++++.+.+.. +++
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            4556799999999999999842 23   26999998753332  34578999999999999999999999766554 899


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||+.+|+|.+++..   ....+++..++.++.|++.||.|||++
T Consensus       102 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~  143 (298)
T 3pls_A          102 LPYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQ  143 (298)
T ss_dssp             ECCCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EecccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999843   345689999999999999999999974

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.80  E-value=3.1e-19  Score=123.96  Aligned_cols=117  Identities=25%  Similarity=0.265  Sum_probs=95.0

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCC-----cCHHHHHHHHHHHhcCCCCcccceeeEEE--eCCeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSN-----FSAVEFINEVSTIGRIHHVNVVQLLGFYS--EGSKR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~  100 (148)
                      .++|.+.+.||+|+||.||.+.. .++..+|+|++....     .....+.+|+.++..++||||+++++++.  ..+..
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            35899999999999999999996 478899999986532     22356889999999999999999999984  45678


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|||+.++ +.+++..  .....+++..++.++.|++.||.|||++
T Consensus        84 ~lv~e~~~~~-l~~~~~~--~~~~~~~~~~~~~~~~qi~~al~~LH~~  128 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDS--VPEKRFPVCQAHGYFCQLIDGLEYLHSQ  128 (305)
T ss_dssp             EEEEECCSEE-HHHHHHH--STTCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEehhccCC-HHHHHHh--CcccccCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999885 6666533  2245689999999999999999999974

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.80  E-value=4.1e-19  Score=123.96  Aligned_cols=116  Identities=13%  Similarity=0.135  Sum_probs=100.2

Q ss_pred             hhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCC--CCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---AVEFINEVSTIGRIH--HVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|.+.+.||+|+||.||++...++..+|+|.+......   ...+.+|+.++..++  ||||+++++++...+..++
T Consensus        26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l  105 (313)
T 3cek_A           26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM  105 (313)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred             ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence            45679999999999999999999877899999999765443   245789999999997  5999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|| +.+++|.+++.    ....+++..++.++.|++.||.|||++
T Consensus       106 v~e-~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~  146 (313)
T 3cek_A          106 VME-CGNIDLNSWLK----KKKSIDPWERKSYWKNMLEAVHTIHQH  146 (313)
T ss_dssp             EEC-CCSEEHHHHHH----HCSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEe-cCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999 56779999983    345689999999999999999999974

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.80  E-value=1.1e-18  Score=122.99  Aligned_cols=115  Identities=25%  Similarity=0.405  Sum_probs=98.2

Q ss_pred             HHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhc--CCCCcccceeeEEEeCC---
Q 041447           24 LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR--IHHVNVVQLLGFYSEGS---   98 (148)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~--l~~~~i~~~~~~~~~~~---   98 (148)
                      ......++|.+.+.||+|+||.||++... +..+|+|++...  ....+.+|.+++..  ++||||+++++++....   
T Consensus        36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~  112 (342)
T 1b6c_B           36 VQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW  112 (342)
T ss_dssp             HHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred             ecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence            34445668999999999999999999875 889999998643  34557788888776  68999999999998765   


Q ss_pred             -eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhh
Q 041447           99 -KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH  146 (148)
Q Consensus        99 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH  146 (148)
                       ..+++|||+++|+|.+++..     ..+++..++.++.|++.||.|||
T Consensus       113 ~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH  156 (342)
T 1b6c_B          113 TQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLH  156 (342)
T ss_dssp             CCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHH
Confidence             79999999999999999832     35899999999999999999999

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.79  E-value=3.7e-19  Score=126.74  Aligned_cols=118  Identities=19%  Similarity=0.291  Sum_probs=93.1

Q ss_pred             hhhcCceeecccccccceEEEEEEecC------CCEEEEEEccCCCcC------------HHHHHHHHHHHhcCCCCccc
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLHT------GGLIAVKMLENSNFS------------AVEFINEVSTIGRIHHVNVV   88 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~~------~~~~avk~~~~~~~~------------~~~~~~e~~~l~~l~~~~i~   88 (148)
                      ...++|.+.+.||+|+||.||+|....      +..+|+|++......            ......|+..+..++||||+
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv  111 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP  111 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence            344589999999999999999998642      478999998764321            11234455567778899999


Q ss_pred             ceeeEEEeC----CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           89 QLLGFYSEG----SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        89 ~~~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++++...    ...++||||+ +++|.+++..   ....+++..++.++.|++.||+|||++
T Consensus       112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~  171 (364)
T 3op5_A          112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA---NAKRFSRKTVLQLSLRILDILEYIHEH  171 (364)
T ss_dssp             CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999998764    4589999999 9999998843   235689999999999999999999974

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.79  E-value=7.2e-19  Score=126.20  Aligned_cols=115  Identities=26%  Similarity=0.363  Sum_probs=89.4

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCC-CCcccceeeEEEeCC--eE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIH-HVNVVQLLGFYSEGS--KR  100 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~--~~  100 (148)
                      ..++|++.+.||+|+||.||+|.. .++..+|+|.+......   .....+|+.++..+. ||||+++++++...+  ..
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            456899999999999999999985 47899999998654333   344778999999997 999999999997644  68


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||||+.+ +|.+++..     ..+++..+..++.|++.||.|||++
T Consensus        87 ~lv~e~~~~-~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~  128 (388)
T 3oz6_A           87 YLVFDYMET-DLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSG  128 (388)
T ss_dssp             EEEEECCSE-EHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecccCc-CHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999985 89888832     3589999999999999999999974

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=4.3e-19  Score=126.99  Aligned_cols=115  Identities=27%  Similarity=0.375  Sum_probs=94.5

Q ss_pred             CceeecccccccceEEEEEEec--CC--CEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEe-CCeEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLH--TG--GLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSE-GSKRALV  103 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~--~~--~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv  103 (148)
                      .|.+.+.||+|+||.||+|...  ++  ..+|+|.++.....  ...+.+|+.++..++||||+++++++.. .+..+++
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            4677899999999999999842  22  35889988653322  3458899999999999999999998654 5678999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+++|+|.+++..   ....+++..++.++.|++.||.|||++
T Consensus       170 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~  211 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASK  211 (373)
T ss_dssp             EECCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EECCCCCCHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999842   334578999999999999999999974

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.79  E-value=6.8e-19  Score=125.72  Aligned_cols=114  Identities=23%  Similarity=0.307  Sum_probs=90.2

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeC------C
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEG------S   98 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~   98 (148)
                      .++|.+.+.||+|+||.||+|.. .++..+|+|++......   ...+.+|+.++..++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            36899999999999999999985 57889999999764333   34578999999999999999999998654      5


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..++++|++ +++|.+++.    . ..+++..+..++.|++.||.|||++
T Consensus       108 ~~~lv~e~~-~~~L~~~~~----~-~~l~~~~~~~i~~qi~~aL~~LH~~  151 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVK----C-QKLTDDHVQFLIYQILRGLKYIHSA  151 (367)
T ss_dssp             CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEeccc-CCCHHHHHh----c-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            689999999 679998872    2 4689999999999999999999974

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.79  E-value=2.2e-19  Score=126.12  Aligned_cols=117  Identities=28%  Similarity=0.428  Sum_probs=95.6

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCCE----EEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGGL----IAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~----~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      ..++|++.+.||+|+||.||+|... ++..    +++|.+.....  ....+.+|+.++..++||||+++++++. .+..
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~   89 (325)
T 3kex_A           11 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL   89 (325)
T ss_dssp             CTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred             CHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence            3468999999999999999999853 4443    77887754322  2344678999999999999999999876 4568


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++||+.+|+|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        90 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~  134 (325)
T 3kex_A           90 QLVTQYLPLGSLLDHVRQ---HRGALGPQLLLNWGVQIAKGMYYLEEH  134 (325)
T ss_dssp             EEEEECCTTCBSHHHHHS---SGGGSCTTHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEeCCCCCHHHHHHH---ccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            899999999999998843   235688999999999999999999974

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.79  E-value=6.6e-19  Score=121.14  Aligned_cols=118  Identities=22%  Similarity=0.326  Sum_probs=97.5

Q ss_pred             hhhcCceeecccccccceEEEEEEec----CCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~----~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      +..++|.+.+.||+|+||.||+|...    ++..+|+|.+.....  ..+.+.+|+.++..++||||+++++++.. +..
T Consensus         9 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~   87 (281)
T 3cc6_A            9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPT   87 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSC
T ss_pred             ecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCC
Confidence            34568999999999999999999843    233599999876432  23458899999999999999999998764 457


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|||+++++|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        88 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~  132 (281)
T 3cc6_A           88 WIIMELYPYGELGHYLER---NKNSLKVLTLVLYSLQICKAMAYLESI  132 (281)
T ss_dssp             EEEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence            899999999999999843   234589999999999999999999974

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.79  E-value=2e-19  Score=127.55  Aligned_cols=113  Identities=19%  Similarity=0.204  Sum_probs=94.0

Q ss_pred             hcCceeecccccccceEEEEEEec---------CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccc----------
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH---------TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQ----------   89 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~---------~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~----------   89 (148)
                      .++|.+.+.||+|+||.||+|...         .+..+|+|.+...    ..+.+|+.++..++||||++          
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            468999999999999999999854         3789999998754    35778999999999999987          


Q ss_pred             -----eeeEEEe-CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           90 -----LLGFYSE-GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        90 -----~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                           +++++.. .+..++||||+ +++|.+++...  ....+++..++.++.|++.||.|||++
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~  178 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLHEN  178 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence                 5666665 78899999999 89999998432  235689999999999999999999974

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.79  E-value=4.3e-19  Score=134.60  Aligned_cols=108  Identities=22%  Similarity=0.380  Sum_probs=92.2

Q ss_pred             cccccccceEEEEEEe---cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQL---HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~---~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      +.||+|+||.||+|..   .++..+|+|+++.....   ...+.+|+.++..++||||+++++++.. +..++||||+.+
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            4799999999999964   24678999998764332   4568999999999999999999998864 558899999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|.+++.    ....+++..++.++.||+.||.|||++
T Consensus       454 g~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~yLH~~  488 (635)
T 4fl3_A          454 GPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES  488 (635)
T ss_dssp             EEHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999983    345689999999999999999999974

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.79  E-value=1.8e-19  Score=126.78  Aligned_cols=115  Identities=31%  Similarity=0.467  Sum_probs=90.9

Q ss_pred             HhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHH--HhcCCCCcccceeeEEEe-----CC
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVST--IGRIHHVNVVQLLGFYSE-----GS   98 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~--l~~l~~~~i~~~~~~~~~-----~~   98 (148)
                      .+..++|++.+.||+|+||.||+|+. ++..+|+|++....  ...+..|.++  +..++||||+++++.+..     ..
T Consensus         9 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   85 (336)
T 3g2f_A            9 SLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM   85 (336)
T ss_dssp             CCCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred             CcChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence            34567899999999999999999976 48899999987543  2334444444  455799999999976543     23


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..++||||+++|+|.+++..     ...++..++.++.|++.||.|||++
T Consensus        86 ~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~  130 (336)
T 3g2f_A           86 EYLLVMEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTE  130 (336)
T ss_dssp             EEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             eEEEEEecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhh
Confidence            57899999999999999833     2348899999999999999999974

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.79  E-value=1.1e-18  Score=122.82  Aligned_cols=118  Identities=24%  Similarity=0.388  Sum_probs=97.8

Q ss_pred             hhhcCceeecccccccceEEEEEEec-CCCE----EEEEEccCCC--cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCe
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH-TGGL----IAVKMLENSN--FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~----~avk~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   99 (148)
                      +...+|++.+.||+|+||.||+|... ++..    +++|.+....  .....+.+|+.++..++||||+++++++.... 
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-   90 (327)
T 3lzb_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-   90 (327)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-
T ss_pred             cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-
Confidence            34578999999999999999999853 4443    5777775432  24567889999999999999999999988655 


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++++++.+|+|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        91 ~~~v~~~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~  136 (327)
T 3lzb_A           91 VQLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDR  136 (327)
T ss_dssp             EEEEECCCSSCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            7899999999999998843   235689999999999999999999974

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.79  E-value=5.3e-19  Score=124.11  Aligned_cols=118  Identities=19%  Similarity=0.331  Sum_probs=98.8

Q ss_pred             hhcCceeecccccccceEEEEEEe--cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCC------cccceeeEEEeCCe
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL--HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHV------NVVQLLGFYSEGSK   99 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~------~i~~~~~~~~~~~~   99 (148)
                      ..++|++.+.||+|+||.||.|..  .++..+|+|++.........+.+|+.++..++|+      +++++++++...+.
T Consensus        12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            456899999999999999999985  3678999999976544455678888888877554      59999999999999


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++||||+ +++|.+++...  ....+++..+..++.|++.||+|||++
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~  137 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSN  137 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999 77999988442  234689999999999999999999974

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.78  E-value=1.3e-18  Score=124.25  Aligned_cols=113  Identities=19%  Similarity=0.187  Sum_probs=96.1

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCC------
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGS------   98 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------   98 (148)
                      .++|.+.+.||+|+||.||.|.. .++..+|+|++......   ...+.+|+.++..++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            35899999999999999999985 46889999999764333   234789999999999999999999987654      


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..++||||+.+ +|.+.+.      ..+++..+..++.|++.||.|||++
T Consensus       104 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~  146 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA  146 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC
Confidence            78999999976 7887772      2478999999999999999999974

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.78  E-value=6.7e-19  Score=129.22  Aligned_cols=113  Identities=20%  Similarity=0.198  Sum_probs=94.6

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeC------C
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEG------S   98 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~   98 (148)
                      .++|++.+.||+|+||.||.|.. .++..+|+|++......   ...+.+|+.++..++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            35799999999999999999985 47889999999764332   34578999999999999999999998654      4


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..++||||+.+ ++.+.+.      ..+++..+..++.|++.||+|||++
T Consensus       141 ~~~lv~E~~~~-~l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~  183 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA  183 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEEeCCCC-CHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHC
Confidence            57999999987 5666661      2389999999999999999999974

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.78  E-value=1.2e-18  Score=124.13  Aligned_cols=113  Identities=15%  Similarity=0.227  Sum_probs=96.2

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeC-----CeEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEG-----SKRA  101 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~  101 (148)
                      .+|.+.+.||+|+||.||.|... ++..+|+|.+......  ...+.+|+.++..++||||+++++++...     ...+
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  106 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY  106 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence            57999999999999999999964 6888999999753322  24588999999999999999999998654     4689


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|++.+ +|.+++..     ..+++..++.++.|++.||.|||++
T Consensus       107 iv~e~~~~-~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~LH~~  147 (364)
T 3qyz_A          107 IVQDLMET-DLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA  147 (364)
T ss_dssp             EEEECCSE-EHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEcccCc-CHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999975 89988732     3589999999999999999999974

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.78  E-value=2.7e-18  Score=121.76  Aligned_cols=113  Identities=26%  Similarity=0.378  Sum_probs=96.1

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCe-----
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSK-----   99 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-----   99 (148)
                      .++|.+.+.||+|+||.||.|.. .+|..+|+|.+......   ...+.+|+.++..++||||+++++++...+.     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            35899999999999999999996 47889999999764433   2457899999999999999999999987654     


Q ss_pred             -EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 -RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                       .+++|||+. ++|.+++    .  ..+++..+..++.|++.||.|||++
T Consensus       103 ~~~lv~e~~~-~~l~~~~----~--~~~~~~~~~~i~~qi~~al~~LH~~  145 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIM----G--LKFSEEKIQYLVYQMLKGLKYIHSA  145 (353)
T ss_dssp             CCEEEEECCS-EEGGGTT----T--SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEecccc-CCHHHHh----c--CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence             499999997 4888877    2  2489999999999999999999974

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.78  E-value=1.1e-19  Score=130.07  Aligned_cols=118  Identities=15%  Similarity=0.090  Sum_probs=90.5

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHH---HHHhcCCCCccccee-------eEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEV---STIGRIHHVNVVQLL-------GFY   94 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~---~~l~~l~~~~i~~~~-------~~~   94 (148)
                      ++|.+.+.||+|+||.||+|.. .++..+|+|++.....    ..+.+.+|+   ..+..++||||++++       +++
T Consensus        73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~  152 (377)
T 3byv_A           73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  152 (377)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred             ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence            5688899999999999999995 5789999999864322    235578999   455566899999998       666


Q ss_pred             EeCC-----------------eEEEEEeccCCCChhhcccccC---CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           95 SEGS-----------------KRALVYEYMPNGSLDRHIFPNE---GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        95 ~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..++                 ..+++|||+ +|+|.+++....   .....+++..++.++.|++.||+|||++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  225 (377)
T 3byv_A          153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY  225 (377)
T ss_dssp             ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC
Confidence            6553                 288999999 579999984321   0112344588889999999999999974

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.78  E-value=3.6e-19  Score=127.54  Aligned_cols=119  Identities=18%  Similarity=0.323  Sum_probs=97.2

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC--------CCcccceeeEEE--
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIH--------HVNVVQLLGFYS--   95 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~--------~~~i~~~~~~~~--   95 (148)
                      ...++|.+.+.||+|+||.||+|.. .++..+|+|++.........+.+|+.++..++        ||||+++++.+.  
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~  113 (397)
T 1wak_A           34 LFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS  113 (397)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred             hcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence            3456899999999999999999985 46889999999765444566889999988875        788999999987  


Q ss_pred             --eCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           96 --EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        96 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                        .....++||||+. +++.+.+..  .....+++..++.++.|++.||.|||++
T Consensus       114 ~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~lH~~  165 (397)
T 1wak_A          114 GVNGTHICMVFEVLG-HHLLKWIIK--SNYQGLPLPCVKKIIQQVLQGLDYLHTK  165 (397)
T ss_dssp             ETTEEEEEEEECCCC-CBHHHHHHH--TTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCceEEEEEeccC-ccHHHHHHh--cccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence              4567999999994 566666533  2235689999999999999999999964

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.78  E-value=4.9e-19  Score=122.15  Aligned_cols=118  Identities=28%  Similarity=0.421  Sum_probs=90.8

Q ss_pred             hhhcCceeecccccccceEEEEEEec--CCC--EEEEEEccCCCc----CHHHHHHHHHHHhcCCCCcccceeeEEEeCC
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH--TGG--LIAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGFYSEGS   98 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~--~~~--~~avk~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   98 (148)
                      +..++|++.+.||+|+||.||+|.+.  ++.  .+|+|++.....    ..+.+.+|+.++..++||||+++++++....
T Consensus        15 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   94 (291)
T 1u46_A           15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP   94 (291)
T ss_dssp             CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             cchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC
Confidence            34568999999999999999999842  333  689998876432    2345889999999999999999999987655


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                       .++++||+.+++|.+++...   ...+++..++.++.|++.||.|||++
T Consensus        95 -~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~  140 (291)
T 1u46_A           95 -MKMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK  140 (291)
T ss_dssp             -CEEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -ceeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence             88999999999999988432   35589999999999999999999974

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.78  E-value=1.2e-18  Score=123.60  Aligned_cols=119  Identities=22%  Similarity=0.258  Sum_probs=86.4

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCe------
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSK------   99 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~------   99 (148)
                      ...++|.+.+.||+|+||.||+|.. .++..+|+|++...........+++..+..++||||+++++++...+.      
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   99 (360)
T 3e3p_A           20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDI   99 (360)
T ss_dssp             HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCE
T ss_pred             hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccce
Confidence            3456899999999999999999996 478899999987655555566778888888999999999999866433      


Q ss_pred             -EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhh
Q 041447          100 -RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH  146 (148)
Q Consensus       100 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH  146 (148)
                       .+++|||+.+ +|...+.........+++..+..++.|++.||.|||
T Consensus       100 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH  146 (360)
T 3e3p_A          100 YLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH  146 (360)
T ss_dssp             EEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence             7899999987 555444222234566899999999999999999999

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.78  E-value=2.1e-18  Score=123.23  Aligned_cols=113  Identities=26%  Similarity=0.388  Sum_probs=96.7

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeE----
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR----  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~----  100 (148)
                      .++|.+.+.||+|+||.||+|.. .++..+|+|++......   ...+.+|+.++..++||||+++++++...+..    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            35899999999999999999986 47889999999764443   34578999999999999999999999876654    


Q ss_pred             --EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 --ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 --~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                        +++|||+.+ +|.+.+      ...+++..+..++.|++.||.|||++
T Consensus       121 ~~~lv~e~~~~-~l~~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~  163 (371)
T 4exu_A          121 DFYLVMPFMQT-DLQKIM------GMEFSEEKIQYLVYQMLKGLKYIHSA  163 (371)
T ss_dssp             CCEEEEECCCE-EHHHHT------TSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEEccccc-cHHHHh------hcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence              999999974 888877      23389999999999999999999974

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.77  E-value=1.5e-18  Score=132.08  Aligned_cols=119  Identities=21%  Similarity=0.322  Sum_probs=98.4

Q ss_pred             HhhhcCceeecccccccceEEEEEEec----CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~----~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   99 (148)
                      ++..++|.+.+.||+|+||.||.|...    .+..+|+|.+......  .+.+.+|+.++..++||||+++++++. .+.
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~  464 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP  464 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence            344567999999999999999999853    2457899988653322  245889999999999999999999884 566


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++||||+++|+|.+++..   ....+++..++.++.|++.||.|||++
T Consensus       465 ~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~  510 (656)
T 2j0j_A          465 VWIIMELCTLGELRSFLQV---RKFSLDLASLILYAYQLSTALAYLESK  510 (656)
T ss_dssp             CEEEEECCTTCBHHHHHHH---TTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEEcCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            8999999999999999843   234589999999999999999999974

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.77  E-value=1.5e-18  Score=126.26  Aligned_cols=116  Identities=20%  Similarity=0.271  Sum_probs=97.1

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcC------CCCcccceeeEEEeCCeEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRI------HHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~~~~~~  101 (148)
                      ..+|++.+.||+|+||.||+|.. .++..||+|++.........+.+|+.++..+      +|+||+.+++.+...+..+
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  175 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC  175 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence            35699999999999999999985 4688999999976544445577787777665      5789999999999999999


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ++||++. ++|.+++...  ....+++..+..++.|++.||+|||+
T Consensus       176 lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~  218 (429)
T 3kvw_A          176 MTFELLS-MNLYELIKKN--KFQGFSLPLVRKFAHSILQCLDALHK  218 (429)
T ss_dssp             EEECCCC-CBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeccC-CCHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999996 4898888542  23458999999999999999999996

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.77  E-value=1.3e-18  Score=123.16  Aligned_cols=114  Identities=21%  Similarity=0.359  Sum_probs=96.7

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeC-----CeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEG-----SKR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~  100 (148)
                      .++|.+.+.||+|+||.||.|... ++..+|+|.+......  ...+.+|+.++..++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            468999999999999999999964 7889999999653322  34577999999999999999999987653     678


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|||+.+ +|.+++..     ..+++..+..++.|++.||.|||++
T Consensus        90 ~lv~e~~~~-~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~  131 (353)
T 2b9h_A           90 YIIQELMQT-DLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS  131 (353)
T ss_dssp             EEEECCCSE-EHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeccCc-cHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999974 89888732     4589999999999999999999974

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.77  E-value=3.7e-19  Score=124.73  Aligned_cols=122  Identities=21%  Similarity=0.255  Sum_probs=100.5

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC-------HHHHHHHHHHHhcCC--CCcccceee
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS-------AVEFINEVSTIGRIH--HVNVVQLLG   92 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~-------~~~~~~e~~~l~~l~--~~~i~~~~~   92 (148)
                      .......++|.+.+.||+|+||.||+|.. .++..+|+|.+......       ...+.+|+.++..++  ||||+++++
T Consensus        36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~  115 (320)
T 3a99_A           36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD  115 (320)
T ss_dssp             ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred             cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence            34445567899999999999999999985 47889999998664322       234667888999886  599999999


Q ss_pred             EEEeCCeEEEEEeccCC-CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           93 FYSEGSKRALVYEYMPN-GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        93 ~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++...+..++++|++.+ ++|.+++.    ....+++..++.++.|++.||+|||++
T Consensus       116 ~~~~~~~~~lv~e~~~~~~~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~~LH~~  168 (320)
T 3a99_A          116 WFERPDSFVLILERPEPVQDLFDFIT----ERGALQEELARSFFWQVLEAVRHCHNC  168 (320)
T ss_dssp             EEECSSEEEEEEECCSSEEEHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCCcEEEEEEcCCCCccHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999999986 89999883    345689999999999999999999974

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.77  E-value=7.7e-19  Score=123.26  Aligned_cols=122  Identities=23%  Similarity=0.267  Sum_probs=98.8

Q ss_pred             HHhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCC-CCcccceeeEEE------
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIH-HVNVVQLLGFYS------   95 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~-~~~i~~~~~~~~------   95 (148)
                      .++...+|.+.+.||+|+||.||+|.. .++..+|+|.+..... ....+.+|+..+..+. ||||+++++++.      
T Consensus        23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~  102 (337)
T 3ll6_A           23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES  102 (337)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred             eeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence            344556899999999999999999996 4788999998855433 2345789999999996 999999999984      


Q ss_pred             --eCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           96 --EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        96 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                        .....+++|||+. |+|.+++.... ....+++..++.++.|++.||.|||++
T Consensus       103 ~~~~~~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~  155 (337)
T 3ll6_A          103 DTGQAEFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQ  155 (337)
T ss_dssp             TTSSEEEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             ccCCceEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence              3445889999996 58988874321 235689999999999999999999974

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.77  E-value=3.5e-18  Score=120.60  Aligned_cols=115  Identities=22%  Similarity=0.246  Sum_probs=91.7

Q ss_pred             hhcCceeec-ccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHH-HHHhcCCCCcccceeeEEEe----CCeE
Q 041447           28 LDSGLDLTW-SSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEV-STIGRIHHVNVVQLLGFYSE----GSKR  100 (148)
Q Consensus        28 ~~~~~~~~~-~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~----~~~~  100 (148)
                      ..++|.+.+ .||+|+||.||.|... +++.+|+|++....    ...+|+ ..+..++||||+++++++..    ....
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            356888854 6999999999999964 78999999986532    222333 33566789999999999876    4558


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||||+++|+|.+++...  ....+++..++.++.|++.||.|||++
T Consensus       102 ~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~l~~LH~~  147 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQER--GDQAFTEREAAEIMRDIGTAIQFLHSH  147 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999998432  234689999999999999999999974

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.77  E-value=2.6e-18  Score=123.95  Aligned_cols=117  Identities=20%  Similarity=0.330  Sum_probs=88.3

Q ss_pred             cCcee-ecccccccceEEEEEEec---CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEe--CCeEEEE
Q 041447           30 SGLDL-TWSSGKDGFGSVYKGQLH---TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE--GSKRALV  103 (148)
Q Consensus        30 ~~~~~-~~~lg~g~~~~v~~~~~~---~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv  103 (148)
                      +.|.+ ++.||+|+||.||+|...   ++..+|+|.+..... ...+.+|+.++..++||||+++++++..  ....++|
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv   98 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL   98 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence            34665 457999999999999854   578899999976443 3467899999999999999999999965  6789999


Q ss_pred             EeccCCCChhhcccccC-----CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNE-----GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+.+ +|.+++....     .....+++..++.++.|++.||.|||++
T Consensus        99 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~  147 (405)
T 3rgf_A           99 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN  147 (405)
T ss_dssp             EECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999975 8877764221     1223589999999999999999999974

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.76  E-value=2.9e-18  Score=120.05  Aligned_cols=117  Identities=22%  Similarity=0.377  Sum_probs=94.1

Q ss_pred             hcCceeecccccccceEEEEEEe--cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcC---CCCcccceeeEEE-----
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL--HTGGLIAVKMLENSNF---SAVEFINEVSTIGRI---HHVNVVQLLGFYS-----   95 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l---~~~~i~~~~~~~~-----   95 (148)
                      .++|.+.+.||+|+||.||+|..  .++..+|+|++.....   ....+.+|+.++..+   +||||+++++++.     
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~   89 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   89 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence            35899999999999999999996  4678899999865322   223466777766655   8999999999987     


Q ss_pred             eCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        96 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .....+++|||+. |+|.+++...  ....+++..++.++.|++.||.|||++
T Consensus        90 ~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~  139 (326)
T 1blx_A           90 RETKLTLVFEHVD-QDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSH  139 (326)
T ss_dssp             SEEEEEEEEECCS-CBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCceEEEEEecCC-CCHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4567899999998 5999988442  234489999999999999999999974

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.76  E-value=1.6e-18  Score=125.73  Aligned_cols=114  Identities=22%  Similarity=0.320  Sum_probs=91.9

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeC------CeEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG------SKRALV  103 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~~~lv  103 (148)
                      +|.+.+.||+|+||.||+|.. .++..||+|.+.....   ...+|+.++..++||||+++++++...      ..+++|
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv  131 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV  131 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence            689999999999999999996 4689999999865322   234799999999999999999988542      236799


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+.+ ++.+.+.........+++..+..++.|++.||.|||++
T Consensus       132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~  175 (420)
T 1j1b_A          132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF  175 (420)
T ss_dssp             EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999986 66655532223346789999999999999999999974

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.76  E-value=2e-18  Score=124.26  Aligned_cols=116  Identities=20%  Similarity=0.267  Sum_probs=90.9

Q ss_pred             hcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCe------EEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSK------RAL  102 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~------~~l  102 (148)
                      ..+|.+.+.||+|+||.||.|....+..+|+|.+......   ..+|+.++..++||||+++++++...+.      .++
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~---~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF---KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS---CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch---HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            4579999999999999999999765666888887543222   2368999999999999999999865433      889


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+.++ +.+.+.........+++..++.++.|++.||.|||++
T Consensus       116 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~  160 (394)
T 4e7w_A          116 VLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI  160 (394)
T ss_dssp             EEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999874 4433322112346789999999999999999999974

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.76  E-value=1.2e-18  Score=124.03  Aligned_cols=118  Identities=15%  Similarity=0.265  Sum_probs=98.8

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-----------CCcccceeeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIH-----------HVNVVQLLGFYS   95 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-----------~~~i~~~~~~~~   95 (148)
                      ...+|.+.+.||+|+||.||.|.. .++..+|+|++.........+.+|+.++..++           ||||+++++.+.
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            346899999999999999999996 57889999999765544566788988888775           799999999987


Q ss_pred             eCC----eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           96 EGS----KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        96 ~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..+    ..+++||++ +++|.+++...  ....+++..++.++.|++.||.|||++
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~  150 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKY--EHRGIPLIYVKQISKQLLLGLDYMHRR  150 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHh--hccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            644    789999999 78999988442  234589999999999999999999974

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.75  E-value=6.8e-18  Score=116.68  Aligned_cols=116  Identities=20%  Similarity=0.258  Sum_probs=96.2

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEE-EeCCeEEEEEe
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFY-SEGSKRALVYE  105 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-~~~~~~~lv~e  105 (148)
                      ..++|.+.+.||+|+||.||+|.. .++..+|+|++.... ....+.+|+.++..++|++++..+..+ ...+..+++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            356899999999999999999996 578899999987643 334578999999999987766555554 66788899999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+ +++|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        86 ~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~  124 (296)
T 3uzp_A           86 LL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK  124 (296)
T ss_dssp             CC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ec-CCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99 8899998842   235689999999999999999999974

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.75  E-value=3.7e-18  Score=120.57  Aligned_cols=119  Identities=15%  Similarity=0.279  Sum_probs=97.3

Q ss_pred             hhhcCceeecccccccceEEEEEEec-CC-CEEEEEEccCCCcCHHHHHHHHHHHhcCCCCc------ccceeeEEEeCC
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLH-TG-GLIAVKMLENSNFSAVEFINEVSTIGRIHHVN------VVQLLGFYSEGS   98 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~-~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~   98 (148)
                      ...++|.+.+.||+|+||.||.|... ++ ..+|+|++.........+.+|+.++..++|++      ++.+.+++...+
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~   95 (355)
T 2eu9_A           16 WLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG   95 (355)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred             eecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence            34578999999999999999999863 44 68999999765444556788888888886554      889999999999


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..+++|||+ ++++.+++...  ....+++..++.++.|++.||.|||++
T Consensus        96 ~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~  142 (355)
T 2eu9_A           96 HMCIAFELL-GKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFLHEN  142 (355)
T ss_dssp             EEEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEEecc-CCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999 55777766432  234689999999999999999999974

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.75  E-value=5.4e-18  Score=118.94  Aligned_cols=121  Identities=18%  Similarity=0.211  Sum_probs=97.0

Q ss_pred             HhhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC--HHHHHHHHH-HHhcCCCCcccceeeEEEeCCeEE
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS--AVEFINEVS-TIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~--~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      .+..++|++.+.||+|+||.||+|.. .++..+|+|++......  ...+..|+. ++..++||||+++++++...+..+
T Consensus        18 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~   97 (327)
T 3aln_A           18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCW   97 (327)
T ss_dssp             CCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEE
T ss_pred             ccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceE
Confidence            44567899999999999999999996 47889999999764332  233556665 677789999999999999999999


Q ss_pred             EEEeccCCCChhhccccc-CCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          102 LVYEYMPNGSLDRHIFPN-EGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ++|||+.+ +|.+++... ......+++..+..++.|++.||.|||+
T Consensus        98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~  143 (327)
T 3aln_A           98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE  143 (327)
T ss_dssp             EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc
Confidence            99999986 777766321 1124568999999999999999999996

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.75  E-value=7.4e-18  Score=116.42  Aligned_cols=116  Identities=20%  Similarity=0.258  Sum_probs=92.0

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEE-EeCCeEEEEEe
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFY-SEGSKRALVYE  105 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-~~~~~~~lv~e  105 (148)
                      ..++|.+.+.||+|+||.||.|.. .++..+|+|++.... ....+.+|+.++..++|++++..+..+ ...+..+++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence            346899999999999999999995 578899999875533 233577899999999887766666554 66788999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+ +++|.+++..   ....+++..++.++.|++.||.|||++
T Consensus        86 ~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~  124 (296)
T 4hgt_A           86 LL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK  124 (296)
T ss_dssp             CC-CCBHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cc-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99 8899998842   234589999999999999999999974

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.74  E-value=1.1e-17  Score=116.69  Aligned_cols=115  Identities=17%  Similarity=0.215  Sum_probs=86.1

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCH--HH-HHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSA--VE-FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~--~~-~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      .++|++.+.||+|+||.||+|... ++..+|+|++.......  .. +..+..++..++||||+++++++...+..+++|
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            457899999999999999999964 78999999997654322  22 333445677789999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ||+ ++.+..+..   .....+++..++.++.|++.||.|||+
T Consensus       104 e~~-~~~~~~l~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~  142 (318)
T 2dyl_A          104 ELM-GTCAEKLKK---RMQGPIPERILGKMTVAIVKALYYLKE  142 (318)
T ss_dssp             CCC-SEEHHHHHH---HHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ecc-CCcHHHHHH---HhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999 445554442   123568999999999999999999996

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.74  E-value=4.7e-18  Score=123.77  Aligned_cols=117  Identities=15%  Similarity=0.060  Sum_probs=94.2

Q ss_pred             HhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEE
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      .+...+|...+.||+|+||.|+.....+++.||+|++.....  ..+.+|+.++..+ +||||+++++.+.+.+..+++|
T Consensus        20 ~i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~   97 (432)
T 3p23_A           20 IVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI   97 (432)
T ss_dssp             EETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             EEccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence            344557899999999999997655455689999999865332  2356899999998 7999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|.+ +|.+++...   ....++..++.++.|++.||.|||++
T Consensus        98 E~~~g-~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~  137 (432)
T 3p23_A           98 ELCAA-TLQEYVEQK---DFAHLGLEPITLLQQTTSGLAHLHSL  137 (432)
T ss_dssp             ECCSE-EHHHHHHSS---SCCCCSSCHHHHHHHHHHHHHHHHHT
T ss_pred             ECCCC-CHHHHHHhc---CCCccchhHHHHHHHHHHHHHHHHHC
Confidence            99975 999988432   23345556778999999999999974

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.74  E-value=5.4e-19  Score=134.04  Aligned_cols=119  Identities=19%  Similarity=0.251  Sum_probs=97.2

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEe------CCe
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSE------GSK   99 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~   99 (148)
                      .++|.+.+.||+|+||.||.|.. .++..+|+|++.....  ....+.+|+.++..++||||+++++++..      .+.
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            35799999999999999999985 4688999999876422  23458899999999999999999988654      667


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++||||+++|+|.+++.... ....+++..++.++.|++.||.|||++
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~  140 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN  140 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            899999999999999885432 233588999999999999999999974

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.73  E-value=2e-17  Score=121.95  Aligned_cols=115  Identities=18%  Similarity=0.255  Sum_probs=96.0

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCC-CcccceeeEEEeCCeEEEEEec
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHH-VNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .++|.+.+.||+|+||.||+|.. .++..||+|++..... ...+.+|+.++..++| +++..+..++...+..+++|||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~   84 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL   84 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence            46899999999999999999995 5789999998765432 3357889999999976 5666666667778889999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      + +++|.+++..   ....+++..++.++.||+.||.|||++
T Consensus        85 ~-g~sL~~ll~~---~~~~l~~~~~~~i~~qi~~aL~yLH~~  122 (483)
T 3sv0_A           85 L-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSK  122 (483)
T ss_dssp             C-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             C-CCCHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9 8899998842   235689999999999999999999974

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.73  E-value=7.3e-18  Score=122.74  Aligned_cols=117  Identities=15%  Similarity=0.018  Sum_probs=89.9

Q ss_pred             hcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEEEecc
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .+.|...+.||+|+||.||.+...+|..||+|.+...  ....+.+|+.++..+ +||||+++++.+.+.+..+++||||
T Consensus        14 ~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~   91 (434)
T 2rio_A           14 KNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC   91 (434)
T ss_dssp             SSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred             hheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence            3456677899999999998766567999999998643  234577899999876 8999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCC---CCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKS---FSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      . |+|.+++.........   .++..++.++.|++.||+|||++
T Consensus        92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  134 (434)
T 2rio_A           92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL  134 (434)
T ss_dssp             S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT
T ss_pred             C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC
Confidence            6 5999998543211111   13345678999999999999974

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.72  E-value=2.2e-17  Score=118.29  Aligned_cols=116  Identities=18%  Similarity=0.200  Sum_probs=96.0

Q ss_pred             hcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CC-----cccceeeEEEeCCeEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIH-HV-----NVVQLLGFYSEGSKRA  101 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~-----~i~~~~~~~~~~~~~~  101 (148)
                      .++|.+.+.||+|+||.||+|... ++..+|+|++.........+.+|+.++..++ |+     +|+.+.+.+...+..+
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  132 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC  132 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence            468999999999999999999864 6889999999764433455677888777764 44     4999999999999999


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +||||+.+ +|.+++...  ....+++..+..++.|++.||.|||.
T Consensus       133 lv~e~~~~-~L~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~lH~  175 (382)
T 2vx3_A          133 LVFEMLSY-NLYDLLRNT--NFRGVSLNLTRKFAQQMCTALLFLAT  175 (382)
T ss_dssp             EEEECCCC-BHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHTS
T ss_pred             EEEecCCC-CHHHHHhhc--CcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            99999965 999988542  22458999999999999999999994

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.69  E-value=4.8e-17  Score=116.11  Aligned_cols=114  Identities=9%  Similarity=-0.064  Sum_probs=77.9

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHH---HHHhcCCCCccccee-------eEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEV---STIGRIHHVNVVQLL-------GFY   94 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~---~~l~~l~~~~i~~~~-------~~~   94 (148)
                      .+|.+.+.||+|+||.||+|.. .++..+|+|++......    ...+.+|+   ..|.. +||||++++       +.+
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence            3589999999999999999996 47889999999875542    22355664   45555 799987754       444


Q ss_pred             EeC-----------------CeEEEEEeccCCCChhhcccccCCCCCCCCHHHH------HHHHHHHHHHHhhhhcC
Q 041447           95 SEG-----------------SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKL------HEVALGTARGIEYLHNG  148 (148)
Q Consensus        95 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~------~~i~~qi~~~l~~lH~~  148 (148)
                      ..+                 ...++||||+. |+|.+++...   ...++...+      ..++.|++.||+|||++
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~  213 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSK  213 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC
Confidence            433                 33899999999 7999998542   223344445      67779999999999974

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.62  E-value=1.5e-15  Score=113.98  Aligned_cols=105  Identities=14%  Similarity=0.108  Sum_probs=77.9

Q ss_pred             ccccccceEEEEEE-ecCCCEEEEEEccCCCcC-----------HHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEEEE
Q 041447           37 SSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFS-----------AVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        37 ~lg~g~~~~v~~~~-~~~~~~~avk~~~~~~~~-----------~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      ..+.|+++....++ ...|..+++|.+......           .+++.+|+++|.++ .|+||+++++++++++..|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            34566666555554 235888999998663221           23488999999999 699999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||++|++|.+.+    ...++++..   .|+.||+.||+|||++
T Consensus       321 MEyv~G~~L~d~i----~~~~~l~~~---~I~~QIl~AL~ylH~~  358 (569)
T 4azs_A          321 MEKLPGRLLSDML----AAGEEIDRE---KILGSLLRSLAALEKQ  358 (569)
T ss_dssp             EECCCSEEHHHHH----HTTCCCCHH---HHHHHHHHHHHHHHHT
T ss_pred             EecCCCCcHHHHH----HhCCCCCHH---HHHHHHHHHHHHHHHC
Confidence            9999999999999    344566654   4789999999999975

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.62  E-value=1.5e-15  Score=104.95  Aligned_cols=103  Identities=15%  Similarity=0.086  Sum_probs=78.7

Q ss_pred             CceeecccccccceEEEEEEecCCCEEEEEEccCCCc-------------------CHHHHHHHHHHHhcCCCCccccee
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNF-------------------SAVEFINEVSTIGRIHHVNVVQLL   91 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~-------------------~~~~~~~e~~~l~~l~~~~i~~~~   91 (148)
                      .|.+.+.||+|+||.||.|...++..+|+|.++....                   ....+.+|+.++..++  | +.+.
T Consensus        91 ~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~  167 (282)
T 1zar_A           91 VDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP  167 (282)
T ss_dssp             CSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred             EEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence            4556799999999999999987788999999865322                   1234789999999998  4 5555


Q ss_pred             eEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           92 GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        92 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+.. +..++||||++||+|.+ +.    .      .....++.|++.||.|||++
T Consensus       168 ~~~~~-~~~~lvmE~~~g~~L~~-l~----~------~~~~~i~~qi~~~l~~lH~~  212 (282)
T 1zar_A          168 KVYAW-EGNAVLMELIDAKELYR-VR----V------ENPDEVLDMILEEVAKFYHR  212 (282)
T ss_dssp             CEEEE-ETTEEEEECCCCEEGGG-CC----C------SCHHHHHHHHHHHHHHHHHT
T ss_pred             eEEec-cceEEEEEecCCCcHHH-cc----h------hhHHHHHHHHHHHHHHHHHC
Confidence            54443 45699999999999988 41    1      12346999999999999964

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.62  E-value=1.2e-15  Score=113.79  Aligned_cols=102  Identities=10%  Similarity=0.075  Sum_probs=76.4

Q ss_pred             eecccccccceEEEEEEecCCCEEEEEEccCCCcC---------HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           34 LTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---------AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        34 ~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ..+.||+|+||.||++... +..+++|........         .+.+.+|+.++..++||||+++..+....+..++||
T Consensus       340 ~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             --------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            3568999999999999544 778888886543221         123689999999999999996666666777889999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++++|.+++.    .        +..++.|++.||.|||++
T Consensus       419 E~~~ggsL~~~l~----~--------~~~i~~qi~~aL~~LH~~  450 (540)
T 3en9_A          419 SYINGKLAKDVIE----D--------NLDIAYKIGEIVGKLHKN  450 (540)
T ss_dssp             ECCCSEEHHHHST----T--------CTHHHHHHHHHHHHHHHT
T ss_pred             ECCCCCCHHHHHH----H--------HHHHHHHHHHHHHHHHHC
Confidence            9999999999982    2        568999999999999974

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.45  E-value=1.6e-13  Score=93.59  Aligned_cols=105  Identities=13%  Similarity=0.092  Sum_probs=75.5

Q ss_pred             ceeecccccccceEEEEEEe-cCCCE--EEEEEccCCCcC-------------------------HHHHHHHHHHHhcCC
Q 041447           32 LDLTWSSGKDGFGSVYKGQL-HTGGL--IAVKMLENSNFS-------------------------AVEFINEVSTIGRIH   83 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~-~~~~~--~avk~~~~~~~~-------------------------~~~~~~e~~~l~~l~   83 (148)
                      |.+.+.||+|+||.||.|.. .+|..  +|+|+++.....                         ...+.+|+..+..+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            56889999999999999997 67888  999987553211                         024778999999988


Q ss_pred             CCcc--cceeeEEEeCCeEEEEEeccCC-C----ChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhh-c
Q 041447           84 HVNV--VQLLGFYSEGSKRALVYEYMPN-G----SLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH-N  147 (148)
Q Consensus        84 ~~~i--~~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~  147 (148)
                      |+++  +.+++.    +..++||||+.+ |    +|.+...       ..++..+..++.|++.||.||| +
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~  189 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGR-------ELKELDVEGIFNDVVENVKRLYQE  189 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGG-------GGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhh-------ccChHHHHHHHHHHHHHHHHHHHH
Confidence            7754  333332    346899999942 3    4554431       1234567889999999999999 5

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.43  E-value=2.5e-13  Score=98.30  Aligned_cols=117  Identities=16%  Similarity=0.070  Sum_probs=81.8

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHHHHHHHhcCCC-Ccccc---------eeeE--
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFINEVSTIGRIHH-VNVVQ---------LLGF--   93 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~e~~~l~~l~~-~~i~~---------~~~~--   93 (148)
                      .|...+.||+|+||.||+|.+ .++..||+|++.....    ..+.+.+|+.++..++| ++...         ..+.  
T Consensus        79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  158 (413)
T 3dzo_A           79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK  158 (413)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred             eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence            477889999999999999995 5789999999874322    24568899999988876 22111         1111  


Q ss_pred             ----------EEe-----CCeEEEEEeccCCCChhhccccc---CCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           94 ----------YSE-----GSKRALVYEYMPNGSLDRHIFPN---EGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        94 ----------~~~-----~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                                +..     ....+++|+.+ +++|.+++...   ......+++..+..++.|++.||+|||++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  230 (413)
T 3dzo_A          159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY  230 (413)
T ss_dssp             CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence                      111     22356777765 56898877311   12345578889999999999999999974

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.34  E-value=3.2e-12  Score=91.58  Aligned_cols=106  Identities=8%  Similarity=-0.059  Sum_probs=72.2

Q ss_pred             CceeecccccccceEEEEEEecCCCEEEEEEccCCCcC---------------HHH--------HHHHHHHHhcCCCCcc
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---------------AVE--------FINEVSTIGRIHHVNV   87 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---------------~~~--------~~~e~~~l~~l~~~~i   87 (148)
                      -|.++..||+|++|.||.|...+|+.+|+|+++.....               ...        ..+|...|..+.++++
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            38899999999999999999888999999987542111               111        2345566666644444


Q ss_pred             cceeeEEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           88 VQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        88 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .....+....  .+|||||+.|++|.++.    ..      +....++.|++.+|.+||++
T Consensus       176 ~vp~p~~~~~--~~LVME~i~G~~L~~l~----~~------~~~~~l~~qll~~l~~lH~~  224 (397)
T 4gyi_A          176 PVPEPIAQSR--HTIVMSLVDALPMRQVS----SV------PDPASLYADLIALILRLAKH  224 (397)
T ss_dssp             SCCCEEEEET--TEEEEECCSCEEGGGCC----CC------SCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCeeeeccC--ceEEEEecCCccHhhhc----cc------HHHHHHHHHHHHHHHHHHHC
Confidence            3222222222  36999999998887654    11      12356889999999999964

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.90  E-value=1e-08  Score=69.56  Aligned_cols=108  Identities=12%  Similarity=0.015  Sum_probs=83.9

Q ss_pred             cCceeecccccccceEEEEEEecCCCEEEEEEccCCC-cCHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEEecc
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSN-FSAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~-~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .+|.+...++.|+.+.||++... +..+++|...... .....+.+|+.++..+. +..+++++++....+..+++||++
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i   92 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEA   92 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred             ccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEec
Confidence            47888888898989999998754 6789999886421 22345788998888874 678889999988888999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +|.++.+...         +......++.+++.+|..||+
T Consensus        93 ~G~~l~~~~~---------~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           93 DGVLCSEEYE---------DEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             SSEEHHHHCC---------TTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCeehhhccC---------CcccHHHHHHHHHHHHHHHhC
Confidence            9999877541         112234678899999999996

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.50  E-value=5.5e-07  Score=60.58  Aligned_cols=103  Identities=16%  Similarity=0.151  Sum_probs=73.2

Q ss_pred             CceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCc--ccceeeEEEeCCeEEEEEeccC
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVN--VVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~--i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      ++.+....+.|..+.||+....+|..+++|.....  ....+.+|+.++..+.+.+  ++++++....++..+++|||++
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~   98 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP   98 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred             CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecC
Confidence            55655554466669999997666778999987653  2345678888888775333  6678888777778899999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |.++.  .    ..   ..   ...++.+++..|..||+
T Consensus        99 G~~l~--~----~~---~~---~~~~~~~l~~~l~~lh~  125 (264)
T 1nd4_A           99 GQDLL--S----SH---LA---PAEKVSIMADAMRRLHT  125 (264)
T ss_dssp             SEETT--T----SC---CC---HHHHHHHHHHHHHHHTT
T ss_pred             CcccC--c----Cc---CC---HhHHHHHHHHHHHHHhC
Confidence            98884  3    11   11   12577888899999985

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.46  E-value=1.4e-06  Score=61.78  Aligned_cols=108  Identities=13%  Similarity=0.063  Sum_probs=77.9

Q ss_pred             eeecccccccceEEEEEEecCCCEEEEEEcc--CCC--cCHHHHHHHHHHHhcCC--CCcccceeeEEEeC---CeEEEE
Q 041447           33 DLTWSSGKDGFGSVYKGQLHTGGLIAVKMLE--NSN--FSAVEFINEVSTIGRIH--HVNVVQLLGFYSEG---SKRALV  103 (148)
Q Consensus        33 ~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~--~~~--~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~---~~~~lv  103 (148)
                      .-.+.++.|.++.+|..... +..+++|...  ...  .....+.+|..++..+.  +..+++++..+.+.   +..+++
T Consensus        41 ~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v  119 (359)
T 3dxp_A           41 LSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI  119 (359)
T ss_dssp             CEEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred             ceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence            34677899999999998765 4578888775  322  12345778998888886  45678888877665   448899


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |||++|.++.+..      ...++..+...++.+++.+|..||+
T Consensus       120 me~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          120 MEFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             EECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhC
Confidence            9999998775422      1236788888999999999999995

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.55  E-value=0.00042  Score=48.02  Aligned_cols=102  Identities=14%  Similarity=0.019  Sum_probs=72.6

Q ss_pred             ecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCC---cccceeeEEE-eCCeEEEEEeccCCC
Q 041447           35 TWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHV---NVVQLLGFYS-EGSKRALVYEYMPNG  110 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~-~~~~~~lv~e~~~~g  110 (148)
                      .+.++.|....+|..    +..+++|.... ......+.+|..+|..+.+.   .+++++.... ..+..+++|++++|.
T Consensus        24 v~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~   98 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ   98 (306)
T ss_dssp             EEEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred             eeecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence            456777888888877    55678887422 22234578999999888642   3566666654 345578999999998


Q ss_pred             ChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          111 SLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       111 ~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ++....      -..++..+...++.++...|..||+
T Consensus        99 ~l~~~~------~~~l~~~~~~~~~~~lg~~La~LH~  129 (306)
T 3tdw_A           99 ILGEDG------MAVLPDDAKDRLALQLAEFMNELSA  129 (306)
T ss_dssp             ECHHHH------HTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ECchhh------hhhCCHHHHHHHHHHHHHHHHHHhc
Confidence            876532      1235778888999999999999995

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.44  E-value=0.0011  Score=44.70  Aligned_cols=94  Identities=12%  Similarity=0.081  Sum_probs=66.0

Q ss_pred             eEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEEeccCCCChhhcccccCC
Q 041447           44 GSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEG  121 (148)
Q Consensus        44 ~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~  121 (148)
                      +.||+.... ++..+++|.-...  ....+.+|...|..+. +--+++++.++.+.+..+++||+++|.++.+....   
T Consensus        39 ~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~---  113 (272)
T 4gkh_A           39 ATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEE---  113 (272)
T ss_dssp             CEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHH---
T ss_pred             CeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccC---
Confidence            358877643 4567888876432  3445778888887764 44577888888889999999999999887765411   


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          122 RGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       122 ~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                           .......+..++...|.-||.
T Consensus       114 -----~~~~~~~~~~~l~~~L~~Lh~  134 (272)
T 4gkh_A          114 -----YPDSGENIVDALAVFLRRLHS  134 (272)
T ss_dssp             -----CGGGHHHHHHHHHHHHHHHHT
T ss_pred             -----CHHHHHHHHHHHHHHHHHhcC
Confidence                 112334577788888888885

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.38  E-value=0.002  Score=44.89  Aligned_cols=94  Identities=16%  Similarity=0.091  Sum_probs=68.5

Q ss_pred             eeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC---CCcccceeeEEEeCCeEEEEEeccCC
Q 041447           33 DLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIH---HVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        33 ~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      .-.+.++.|....+|..... +..+++|.....  ....+..|...|..+.   ...+++++.+....+..+++|||+++
T Consensus        39 ~~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G  115 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLINDE-VQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK  115 (312)
T ss_dssp             CEEEEECCSSSSEEEEEESS-SCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred             eeeEEeCCccceeeeEEEEC-CCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence            34567889999999998753 667888876542  2455778888777763   36788888887777889999999998


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      .++..                  ....++..+|+-||.
T Consensus       116 ~~~~~------------------~~~~~lG~~LA~LH~  135 (312)
T 3jr1_A          116 SKNKQ------------------SSFTIFAEKIAQLHQ  135 (312)
T ss_dssp             CCCCT------------------THHHHHHHHHHHHHH
T ss_pred             CCCCc------------------hhHHHHHHHHHHHHc
Confidence            65311                  134567778888885

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.36  E-value=0.0024  Score=43.67  Aligned_cols=84  Identities=19%  Similarity=0.248  Sum_probs=58.5

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCC---CcccceeeEEEeCC
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHH---VNVVQLLGFYSEGS   98 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~---~~i~~~~~~~~~~~   98 (148)
                      .+.+.......-...+|.|..+.||+.+..+|+.+.+|+....... ...+..|...|..+..   ..+++++..  .. 
T Consensus         8 ~~~~l~G~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~-   84 (288)
T 3f7w_A            8 RVTELTGREVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD-   84 (288)
T ss_dssp             HHHHHHCCCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET-
T ss_pred             HHHHhcCCCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC-
Confidence            3445556667778889999999999999888999999986543332 3346788888877742   234454443  22 


Q ss_pred             eEEEEEeccCCC
Q 041447           99 KRALVYEYMPNG  110 (148)
Q Consensus        99 ~~~lv~e~~~~g  110 (148)
                       .+++|||+.++
T Consensus        85 -~~lv~e~l~~~   95 (288)
T 3f7w_A           85 -RTLAMEWVDER   95 (288)
T ss_dssp             -TEEEEECCCCC
T ss_pred             -ceEEEEeeccc
Confidence             46889998764

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.28  E-value=0.0015  Score=45.94  Aligned_cols=114  Identities=8%  Similarity=0.023  Sum_probs=73.9

Q ss_pred             eeccc-ccccceEEEEEEec-------CCCEEEEEEccCCC---c-CHHHHHHHHHHHhcCC-C--CcccceeeEEEeC-
Q 041447           34 LTWSS-GKDGFGSVYKGQLH-------TGGLIAVKMLENSN---F-SAVEFINEVSTIGRIH-H--VNVVQLLGFYSEG-   97 (148)
Q Consensus        34 ~~~~l-g~g~~~~v~~~~~~-------~~~~~avk~~~~~~---~-~~~~~~~e~~~l~~l~-~--~~i~~~~~~~~~~-   97 (148)
                      ..+.| +.|....+|.....       ++..+++|......   . ....+.+|..++..+. +  ..+++++....+. 
T Consensus        24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~  103 (357)
T 3ats_A           24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD  103 (357)
T ss_dssp             EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred             EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence            34667 78888899987643       25678888765422   1 2245677888777764 2  3567777766544 


Q ss_pred             --CeEEEEEeccCCCChhhccccc--CCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           98 --SKRALVYEYMPNGSLDRHIFPN--EGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        98 --~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                        +..+++||+++|.++.+.+...  ......++..+...++.+++..|.-||+
T Consensus       104 ~~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~  157 (357)
T 3ats_A          104 VLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHS  157 (357)
T ss_dssp             TTSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhC
Confidence              3568999999997776532100  0001135666677888999999999995

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.18  E-value=0.00053  Score=47.32  Aligned_cols=102  Identities=17%  Similarity=0.126  Sum_probs=69.7

Q ss_pred             ecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCc--ccceeeEEEeCC---eEEEEEeccC
Q 041447           35 TWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVN--VVQLLGFYSEGS---KRALVYEYMP  108 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~--i~~~~~~~~~~~---~~~lv~e~~~  108 (148)
                      .+.++.|....+|...    ..+++|..... .....+.+|..++..+. +..  +++++......+   ..++||++++
T Consensus        25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~   99 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK   99 (304)
T ss_dssp             CCEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred             eEecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence            4557888888888752    45788875432 22455788998887773 333  344443332222   3578999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |.++.+..      ...++..+...++.|++..+..||+
T Consensus       100 G~~l~~~~------~~~l~~~~~~~~~~~l~~~la~LH~  132 (304)
T 3sg8_A          100 GVPLTPLL------LNNLPKQSQNQAAKDLARFLSELHS  132 (304)
T ss_dssp             CEECCHHH------HHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeECCccc------cccCCHHHHHHHHHHHHHHHHHHHc
Confidence            98876533      1346788889999999999999995

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=96.55  E-value=0.017  Score=41.20  Aligned_cols=75  Identities=12%  Similarity=-0.005  Sum_probs=48.4

Q ss_pred             ecccccccceEEEEEEec-CCCEEEEEEccCCC--------cCHHHHHHHHHHHhcCCC--C-cccceeeEEEeCCeEEE
Q 041447           35 TWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSN--------FSAVEFINEVSTIGRIHH--V-NVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~--------~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~l  102 (148)
                      .+.+|.|..+.||++... ++..+++|......        .....+..|..++..+..  | .+++++..  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            567899999999999743 46789999764321        123345678888776631  2 44555533  4555789


Q ss_pred             EEeccCCCC
Q 041447          103 VYEYMPNGS  111 (148)
Q Consensus       103 v~e~~~~g~  111 (148)
                      +||++++..
T Consensus       113 vmE~l~g~~  121 (397)
T 2olc_A          113 VMEDLSHLK  121 (397)
T ss_dssp             EECCCTTSE
T ss_pred             EEEeCCCcc
Confidence            999997643

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=95.44  E-value=0.15  Score=35.23  Aligned_cols=73  Identities=12%  Similarity=0.212  Sum_probs=40.3

Q ss_pred             cccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcC-----CCCccccee-e--EEEeCCeEEEEEecc
Q 041447           36 WSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRI-----HHVNVVQLL-G--FYSEGSKRALVYEYM  107 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~-~--~~~~~~~~~lv~e~~  107 (148)
                      ..++.|..+.+|.....++ .+++|.....   ......|..++..+     ..|.++... +  +....+..+++++|+
T Consensus        38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i  113 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI  113 (346)
T ss_dssp             EECC----CEEEEEEETTE-EEEEEEECSC---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred             eeccccccCcEEEEEeCCC-CEEEEecCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence            4455567788998876544 5888988652   23333444444433     223333311 1  123467788999999


Q ss_pred             CCCCh
Q 041447          108 PNGSL  112 (148)
Q Consensus       108 ~~g~L  112 (148)
                      +|.++
T Consensus       114 ~G~~~  118 (346)
T 2q83_A          114 EGRPF  118 (346)
T ss_dssp             CCBCC
T ss_pred             cCccC
Confidence            98655

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=95.37  E-value=0.19  Score=34.70  Aligned_cols=75  Identities=15%  Similarity=0.112  Sum_probs=47.4

Q ss_pred             ccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCC--CcccceeeE-----EEeCCeEEEEEeccCC
Q 041447           37 SSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHH--VNVVQLLGF-----YSEGSKRALVYEYMPN  109 (148)
Q Consensus        37 ~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~-----~~~~~~~~lv~e~~~~  109 (148)
                      .++ |....+|.....+|..+++|...........+..|..++..+..  -.+++++..     ....+..++++++++|
T Consensus        33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G  111 (328)
T 1zyl_A           33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG  111 (328)
T ss_dssp             EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred             eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence            455 66778898766556678999887544455566677777666531  123444332     2235566789999987


Q ss_pred             CCh
Q 041447          110 GSL  112 (148)
Q Consensus       110 g~L  112 (148)
                      .++
T Consensus       112 ~~~  114 (328)
T 1zyl_A          112 RQF  114 (328)
T ss_dssp             EEC
T ss_pred             CCC
Confidence            543

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=95.12  E-value=0.096  Score=37.48  Aligned_cols=96  Identities=10%  Similarity=0.138  Sum_probs=55.0

Q ss_pred             cccccccceEEEEEEec--------CCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEEec
Q 041447           36 WSSGKDGFGSVYKGQLH--------TGGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~--------~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      +.+..|-...+|++...        ++..+++|+............+|..++..+. +.-.+++++.+.  +  .+++||
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v~e~  131 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRLEQY  131 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEEEC
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccEEEE
Confidence            44566767788988753        2467888876332223455678888887764 322355555443  2  289999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ++|.++..--         +..   ..+..+++..|+-||+
T Consensus       132 i~G~~l~~~~---------l~~---p~~~~~ia~~La~LH~  160 (379)
T 3feg_A          132 IPSRPLKTQE---------LRE---PVLSAAIATKMAQFHG  160 (379)
T ss_dssp             CSEEECCGGG---------GGC---HHHHHHHHHHHHHHHT
T ss_pred             ecCccCChhH---------hCC---HHHHHHHHHHHHHHhC
Confidence            9986553211         111   2356678888888885

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=93.74  E-value=0.4  Score=35.18  Aligned_cols=97  Identities=11%  Similarity=0.078  Sum_probs=56.8

Q ss_pred             ecccccccceEEEEEEecC-CCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcc-cceeeEEEeCCeEEEEEeccCCCCh
Q 041447           35 TWSSGKDGFGSVYKGQLHT-GGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNV-VQLLGFYSEGSKRALVYEYMPNGSL  112 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~-~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~~g~L  112 (148)
                      .+.|+.|-...+|.+...+ +..+++|+........-+..+|..++..+...++ +++++.+  .+  .+++||++|.++
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~l  188 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYAL  188 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEEC
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCccC
Confidence            4556777778899988653 4678888764322111122477777777753333 5666555  22  259999987554


Q ss_pred             hhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          113 DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       113 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ...         .+..   ..++.+++..|+-||.
T Consensus       189 ~~~---------~l~~---~~~~~~ia~~La~LH~  211 (458)
T 2qg7_A          189 SRE---------DIKN---PKFQKLIAKNLKLLHD  211 (458)
T ss_dssp             CTT---------TTTS---HHHHHHHHHHHHHHHT
T ss_pred             Chh---------hcCC---HHHHHHHHHHHHHHhc
Confidence            321         1111   1356778888888885

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=93.20  E-value=0.42  Score=34.74  Aligned_cols=97  Identities=7%  Similarity=0.034  Sum_probs=56.7

Q ss_pred             ecccccccceEEEEEEecC--------CCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEEe
Q 041447           35 TWSSGKDGFGSVYKGQLHT--------GGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~--------~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      .+.+..|-...+|+....+        +..+++|+........-+..+|..++..+. ..-.+++++.+  .  -++++|
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~e  150 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEE  150 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEE
Confidence            4556667778889887542        577888876442212122356777766663 22244555422  3  268999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |++|.+|..--         +..   ..+..+++..|+-||+
T Consensus       151 fI~G~~l~~~~---------l~~---~~~~~~ia~~La~LH~  180 (424)
T 3mes_A          151 FIDGEPLTTKQ---------LQL---THICVEVAKNMGSLHI  180 (424)
T ss_dssp             CCCSEECCTGG---------GGS---HHHHHHHHHHHHHHHT
T ss_pred             EeCCccCChhh---------cCC---HHHHHHHHHHHHHHhc
Confidence            99985543211         111   1356778888888885

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=92.84  E-value=0.52  Score=34.17  Aligned_cols=96  Identities=15%  Similarity=0.184  Sum_probs=58.8

Q ss_pred             ecccccccceEEEEEEecC--------CCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEEe
Q 041447           35 TWSSGKDGFGSVYKGQLHT--------GGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~--------~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      .+.++.|....+|.+...+        +..+++|+.... .....+.+|..++..+. +.-.+++++.+.  +  .+++|
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e  152 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE  152 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence            4566778778999988542        467888887432 12245567888877764 222355555432  2  28999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |++|.++...-         +..   ..++.+++..|+-||.
T Consensus       153 ~l~G~~l~~~~---------l~~---~~~~~~ia~~La~LH~  182 (429)
T 1nw1_A          153 YIPSRPLSCHE---------ISL---AHMSTKIAKRVAKVHQ  182 (429)
T ss_dssp             CCCEEECCTTG---------GGS---HHHHHHHHHHHHHHTT
T ss_pred             EeCCcccChhh---------cCC---HHHHHHHHHHHHHHhC
Confidence            99875543210         111   1346778888888885

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=92.73  E-value=0.36  Score=32.95  Aligned_cols=95  Identities=11%  Similarity=0.143  Sum_probs=52.2

Q ss_pred             ecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcc-cceeeEEEeCCeEEEEEecc-CCCCh
Q 041447           35 TWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNV-VQLLGFYSEGSKRALVYEYM-PNGSL  112 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~-~~g~L  112 (148)
                      .+.++.|....+|..     ..+++|+.........+..+|..++..+...++ ++++.  ...+.-++++||+ +|.++
T Consensus        23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~--~~~~~~~~v~e~i~~g~~l   95 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLH--VDPATGVMVTRYIAGAQTM   95 (301)
T ss_dssp             CEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEE--ECTTTCCEEEECCTTCEEC
T ss_pred             eeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEE--EECCCCEEEEeecCCCccC
Confidence            567788888899988     457778765422111123456666665532222 44443  3344457899999 55444


Q ss_pred             hhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          113 DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       113 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      ....           ......++.+++..|+-||+
T Consensus        96 ~~~~-----------~~~~~~~~~~~~~~La~lH~  119 (301)
T 3dxq_A           96 SPEK-----------FKTRPGSPARAGEAFRKLHG  119 (301)
T ss_dssp             CHHH-----------HHHSTTHHHHHHHHHHHHHT
T ss_pred             CHhh-----------HhhhHHHHHHHHHHHHHHhC
Confidence            2210           00002356777788888885

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=92.50  E-value=1.5  Score=29.95  Aligned_cols=76  Identities=7%  Similarity=-0.033  Sum_probs=41.3

Q ss_pred             ecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCC--CcccceeeE------EEeCCeEEEEEec
Q 041447           35 TWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHH--VNVVQLLGF------YSEGSKRALVYEY  106 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~------~~~~~~~~lv~e~  106 (148)
                      .+.++.|....+|.....++ .+++|..... .....+..|..++..+..  -.+++++..      ....+..+++++|
T Consensus        27 ~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~  104 (322)
T 2ppq_A           27 YKGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF  104 (322)
T ss_dssp             EEEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred             eeccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence            34566777788998876545 6788987652 122344556666554421  112333311      1234667899999


Q ss_pred             cCCCCh
Q 041447          107 MPNGSL  112 (148)
Q Consensus       107 ~~~g~L  112 (148)
                      ++|..+
T Consensus       105 l~G~~~  110 (322)
T 2ppq_A          105 LEGMWL  110 (322)
T ss_dssp             CCCBCC
T ss_pred             CCCcCC
Confidence            988654

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=91.65  E-value=0.65  Score=33.38  Aligned_cols=73  Identities=14%  Similarity=0.145  Sum_probs=43.6

Q ss_pred             eecccccccceEEEEEEecCCCEEEEEEccC-------C-Cc--CHHHHHHHHHHHh-cCCCCcccceeeEEEeCCeEEE
Q 041447           34 LTWSSGKDGFGSVYKGQLHTGGLIAVKMLEN-------S-NF--SAVEFINEVSTIG-RIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        34 ~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~-------~-~~--~~~~~~~e~~~l~-~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      -.+.+|.|..+.+|+... ++..+++|...+       . ..  ....+..|+..+. ......+++++...  .+..++
T Consensus        38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l  114 (420)
T 2pyw_A           38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI  114 (420)
T ss_dssp             EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred             EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence            456789999999999864 467889994321       1 11  1222333332222 12234566666554  566789


Q ss_pred             EEecc-CC
Q 041447          103 VYEYM-PN  109 (148)
Q Consensus       103 v~e~~-~~  109 (148)
                      |||++ ++
T Consensus       115 v~e~l~~g  122 (420)
T 2pyw_A          115 GMRYLEPP  122 (420)
T ss_dssp             EECCCCTT
T ss_pred             EEeecCCc
Confidence            99999 77

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=91.47  E-value=1.5  Score=30.20  Aligned_cols=101  Identities=9%  Similarity=-0.043  Sum_probs=50.3

Q ss_pred             ecccccccceE-EEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC--CCcccceeeEEEeCCeEEEEEeccCCCC
Q 041447           35 TWSSGKDGFGS-VYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIH--HVNVVQLLGFYSEGSKRALVYEYMPNGS  111 (148)
Q Consensus        35 ~~~lg~g~~~~-v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~lv~e~~~~g~  111 (148)
                      .+.++.|+... +|+....++..+++|.......  .....|+.++..+.  .-.+++++......  .+++||++.+.+
T Consensus        23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~--~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~   98 (333)
T 3csv_A           23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG--GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDAL   98 (333)
T ss_dssp             ECC--------CCEEEECTTCCEEEEEECCTTTT--CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCB
T ss_pred             eeECCCCCCCceEEEEEcCCCCeEEEEECCCCCC--ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcc
Confidence            34455554443 5565543366777776544320  22334555555442  22355555543223  368999997767


Q ss_pred             hhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          112 LDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       112 L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +.+++...     ....   .....++...|.-||.
T Consensus        99 l~~~l~~~-----~~~~---~~~~~~~~~~La~lH~  126 (333)
T 3csv_A           99 FTEVINND-----PAQE---MPLYRAAVDLLIHLHD  126 (333)
T ss_dssp             HHHHHHHC-----GGGH---HHHHHHHHHHHHHHHT
T ss_pred             hHHHhcCC-----CccH---HHHHHHHHHHHHHHhc
Confidence            76665211     1111   3456777888888885

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=91.19  E-value=0.73  Score=32.39  Aligned_cols=97  Identities=11%  Similarity=0.086  Sum_probs=52.4

Q ss_pred             ecccccccceEEEEEEecC---------CCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCc-ccceeeEEEeCCeEEEEE
Q 041447           35 TWSSGKDGFGSVYKGQLHT---------GGLIAVKMLENSNFSAVEFINEVSTIGRIHHVN-VVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~~---------~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~  104 (148)
                      ...++.|....+|.....+         +..+++|+.........+...|..++..+...+ .+++++..  .  -++++
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~  113 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE  113 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence            4556777778899887542         267888876542211112356776666664222 44555433  2  36899


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      +|++|.++....        ..+    ...+.+++..|+-||.
T Consensus       114 e~i~G~~l~~~~--------~~~----~~~~~~~a~~La~lH~  144 (369)
T 3c5i_A          114 EWLYGDPLRIDD--------LKN----PTILIGIANVLGKFHT  144 (369)
T ss_dssp             ECCCSEECCGGG--------GGC----HHHHHHHHHHHHHHHT
T ss_pred             EEecCCcCChhh--------cCC----hHHHHHHHHHHHHHHc
Confidence            999875543211        001    1245677777777774

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=89.07  E-value=0.051  Score=39.96  Aligned_cols=60  Identities=5%  Similarity=0.014  Sum_probs=17.4

Q ss_pred             eecccccccceEEEEEEec-CCCEEEE------EEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEe
Q 041447           34 LTWSSGKDGFGSVYKGQLH-TGGLIAV------KMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSE   96 (148)
Q Consensus        34 ~~~~lg~g~~~~v~~~~~~-~~~~~av------k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~   96 (148)
                      +.+.+|   ||.||++.+. +..+||+      |........   ...+.++..++...+|||+++.+++...
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            445565   9999999864 2356777      555432222   2346778888888899999999887643

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=84.99  E-value=7.7  Score=26.94  Aligned_cols=89  Identities=8%  Similarity=0.030  Sum_probs=51.2

Q ss_pred             cccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcC---CCCcccceeeE------EEeCCeEEEEEeccCCC
Q 041447           40 KDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRI---HHVNVVQLLGF------YSEGSKRALVYEYMPNG  110 (148)
Q Consensus        40 ~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l---~~~~i~~~~~~------~~~~~~~~lv~e~~~~g  110 (148)
                      .|....+|+....++ .+++|+......     ..|+..+..+   .-|.++.++..      ....+..+++|+|++|.
T Consensus        33 ~g~~N~vy~v~~~~g-~~vLK~~~~~~~-----~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G~  106 (339)
T 3i1a_A           33 ADTNAFAYQADSESK-SYFIKLKYGYHD-----EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAP  106 (339)
T ss_dssp             SCSSCEEEEEECSSC-EEEEEEEECSSC-----CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCCC
T ss_pred             CccccceEEEEeCCC-CEEEEEecCccc-----hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCCC
Confidence            333578998876656 889998765442     2344334333   12224444322      23356788999999986


Q ss_pred             ChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          111 SLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       111 ~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      .+..         ...+..+    +.++...|+-||.
T Consensus       107 ~~~~---------~~~~~~~----~~~lg~~La~LH~  130 (339)
T 3i1a_A          107 NGFT---------QNLTGKQ----WKQLGKVLRQIHE  130 (339)
T ss_dssp             BTTT---------SCCCHHH----HHHHHHHHHHHHT
T ss_pred             cCcc---------cCCCHHH----HHHHHHHHHHHhC
Confidence            6532         1123332    3567777777775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	148
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-29
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-28
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-26
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-26
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	6e-26
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-25
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	8e-25
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-24
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-24
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	9e-24
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	9e-24
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-23
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	6e-23
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	6e-23
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	8e-23
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	9e-23
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-22
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-22
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-22
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-22
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	7e-22
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-21
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-21
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-20
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-20
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	5e-20
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-20
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	6e-20
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	8e-20
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-19
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-19
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-19
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-19
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	4e-19
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-18
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-18
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-18
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	8e-18
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-17
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-17
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-17
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-17
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	6e-17
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-16
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-16
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-16
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-16
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-16
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	7e-15
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	8e-15
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	9e-15
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-14
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-14
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-13
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-13
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	4e-13
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-13
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	8e-13
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-12
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-12
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-11
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-09
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-06

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 1e-29
 Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 14/132 (10%)

Query: 16  VDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINE 75
           +D      L++L           G   FG V  G+      +A+KM++  + S  EFI E
Sbjct: 1   IDPKDLTFLKEL-----------GTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEE 49

Query: 76  VSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVA 135
              +  + H  +VQL G  ++     ++ EYM NG L  ++     R   F  ++L E+ 
Sbjct: 50  AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMC 106

Query: 136 LGTARGIEYLHN 147
                 +EYL +
Sbjct: 107 KDVCEAMEYLES 118

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 5e-28
 Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 14/132 (10%)

Query: 16  VDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINE 75
           V   + + + +L           G   FG V+ G  +    +AVK L+  + S   F+ E
Sbjct: 10  VPRETLKLVERL-----------GAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 58

Query: 76  VSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVA 135
            + + ++ H  +V+L    ++     ++ EYM NGSL   +      G   +  KL ++A
Sbjct: 59  ANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTP--SGIKLTINKLLDMA 115

Query: 136 LGTARGIEYLHN 147
              A G+ ++  
Sbjct: 116 AQIAEGMAFIEE 127

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.4 bits (242), Expect = 3e-26
 Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 14/132 (10%)

Query: 16  VDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINE 75
           +D      ++++           G   FG V+ G       +A+K +     S  +FI E
Sbjct: 2   IDPSELTFVQEI-----------GSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEE 50

Query: 76  VSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVA 135
              + ++ H  +VQL G   E +   LV+E+M +G L  ++    G    F+ E L  + 
Sbjct: 51  AEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMC 107

Query: 136 LGTARGIEYLHN 147
           L    G+ YL  
Sbjct: 108 LDVCEGMAYLEE 119

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 98.1 bits (244), Expect = 3e-26
 Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 22/138 (15%)

Query: 17  DNPS--YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE-- 71
           D+P   + DLR++           G   FG+VY  + +    ++A+K +  S   + E  
Sbjct: 11  DDPEKLFSDLREI-----------GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW 59

Query: 72  --FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWE 129
              I EV  + ++ H N +Q  G Y       LV EY    + D          K     
Sbjct: 60  QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEV----HKKPLQEV 115

Query: 130 KLHEVALGTARGIEYLHN 147
           ++  V  G  +G+ YLH+
Sbjct: 116 EIAAVTHGALQGLAYLHS 133

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.0 bits (241), Expect = 6e-26
 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 9/112 (8%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
           G   FG+VYKG+ H    +AVKML  +  +  +   F NEV  + +  HVN++  +G+ +
Sbjct: 17  GSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              + A+V ++    SL  H+   E +   F   KL ++A  TA+G++YLH 
Sbjct: 75  AP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHA 122

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.7 bits (235), Expect = 3e-25
 Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 5/110 (4%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLG-FYSEG 97
           GK  FG V  G  + G  +AVK ++N   +   F+ E S + ++ H N+VQLLG    E 
Sbjct: 16  GKGEFGDVMLGD-YRGNKVAVKCIKNDATAQ-AFLAEASVMTQLRHSNLVQLLGVIVEEK 73

Query: 98  SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
               +V EYM  GSL  ++            + L + +L     +EYL  
Sbjct: 74  GGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEG 121

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.7 bits (235), Expect = 8e-25
 Identities = 25/130 (19%), Positives = 54/130 (41%), Gaps = 18/130 (13%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAV--EFINEVS 77
           +E + +L           G    G V+K     +G ++A K++      A+  + I E+ 
Sbjct: 8   FEKISEL-----------GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 56

Query: 78  TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
            +   +   +V   G +    + ++  E+M  GSLD+ +     +      + L +V++ 
Sbjct: 57  VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIA 112

Query: 138 TARGIEYLHN 147
             +G+ YL  
Sbjct: 113 VIKGLTYLRE 122

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.4 bits (229), Expect = 4e-24
 Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 18/134 (13%)

Query: 18  NPS--YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE-FI 73
           NP   +E + +L           G   FG VYK Q   T  L A K+++  +   +E ++
Sbjct: 9   NPEDFWEIIGEL-----------GDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYM 57

Query: 74  NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHE 133
            E+  +    H N+V+LL  +   +   ++ E+   G++D  +       +  +  ++  
Sbjct: 58  VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML---ELERPLTESQIQV 114

Query: 134 VALGTARGIEYLHN 147
           V   T   + YLH+
Sbjct: 115 VCKQTLDALNYLHD 128

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.1 bits (228), Expect = 5e-24
 Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 3/109 (2%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
           G+  FG V+ G  +    +A+K L+    S   F+ E   + ++ H  +VQL    SE  
Sbjct: 26  GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE- 84

Query: 99  KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              +V EYM  GSL   +      GK     +L ++A   A G+ Y+  
Sbjct: 85  PIYIVTEYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVER 131

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 91.3 bits (226), Expect = 9e-24
 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 3/110 (2%)

Query: 39  GKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
           G   +G VY+G        +AVK L+       EF+ E + +  I H N+VQLLG  +  
Sbjct: 26  GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE 85

Query: 98  SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
               ++ E+M  G+L  ++   E   +  S   L  +A   +  +EYL  
Sbjct: 86  PPFYIITEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLEK 133

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.3 bits (226), Expect = 9e-24
 Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 9/114 (7%)

Query: 39  GKDGFGSVYKGQLH---TGGLIAVKMLENSNFSAV--EFINEVSTIGRIHHVNVVQLLGF 93
           G   FGSV +G          +A+K+L+     A   E + E   + ++ +  +V+L+G 
Sbjct: 18  GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV 77

Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             +     LV E    G L + +    G+ +      + E+    + G++YL  
Sbjct: 78  C-QAEALMLVMEMAGGGPLHKFLV---GKREEIPVSNVAELLHQVSMGMKYLEE 127

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.4 bits (224), Expect = 2e-23
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 20/137 (14%)

Query: 15  SVDNPS--YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE 71
           SV +P   Y    K+           G+   G+VY    + TG  +A++ +        E
Sbjct: 14  SVGDPKKKYTRFEKI-----------GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62

Query: 72  -FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEK 130
             INE+  +    + N+V  L  Y  G +  +V EY+  GSL   +             +
Sbjct: 63  LIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-----ETCMDEGQ 117

Query: 131 LHEVALGTARGIEYLHN 147
           +  V     + +E+LH+
Sbjct: 118 IAAVCRECLQALEFLHS 134

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 90.1 bits (223), Expect = 6e-23
 Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 5/111 (4%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE-FINEVSTIGRIHHVNVVQLLGFYSE 96
           G   FG V++     TG   A K +   + S  E    E+ T+  + H  +V L   + +
Sbjct: 35  GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED 94

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            ++  ++YE+M  G L   +     +    S ++  E      +G+ ++H 
Sbjct: 95  DNEMVMIYEFMSGGELFEKVADEHNK---MSEDEAVEYMRQVCKGLCHMHE 142

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 90.1 bits (223), Expect = 6e-23
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 16/129 (12%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE-FINEVST 78
           Y+ L +L           G   FG V++     TG +   K +            NE+S 
Sbjct: 31  YDILEEL-----------GSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISI 79

Query: 79  IGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGT 138
           + ++HH  ++ L   + +  +  L+ E++  G L   I          S  ++       
Sbjct: 80  MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI---AAEDYKMSEAEVINYMRQA 136

Query: 139 ARGIEYLHN 147
             G++++H 
Sbjct: 137 CEGLKHMHE 145

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.1 bits (220), Expect = 8e-23
 Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG- 97
           GK  FG V++G+   G  +AVK+  +    +     E+     + H N++  +   ++  
Sbjct: 12  GKGRFGEVWRGK-WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 70

Query: 98  ---SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              ++  LV +Y  +GSL  ++        + + E + ++AL TA G+ +LH 
Sbjct: 71  GTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHM 118

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.1 bits (220), Expect = 9e-23
 Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 23/132 (17%)

Query: 39  GKDGFGSVYKGQLH------TGGLIAVKMLENSNFSAV--EFINEVSTIGRI-HHVNVVQ 89
           G   FG V +   +          +AVKML+ S         ++E+  +  + +H+N+V 
Sbjct: 32  GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN 91

Query: 90  LLGFYSEGSKRALVYEYMPNGSLDRHIFPN--------------EGRGKSFSWEKLHEVA 135
           LLG  + G    ++ EY   G L   +                 E    +   E L   +
Sbjct: 92  LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFS 151

Query: 136 LGTARGIEYLHN 147
              A+G+ +L +
Sbjct: 152 YQVAKGMAFLAS 163

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.9 bits (217), Expect = 2e-22
 Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 12/117 (10%)

Query: 39  GKDGFGSVYKGQLH----TGGLIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQL 90
           G   FG V +G+          +AVK L+    S  E    FI EV+ +  + H N+++L
Sbjct: 17  GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRL 76

Query: 91  LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            G       + +V E  P GSL   +  ++G    F    L   A+  A G+ YL +
Sbjct: 77  YGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLES 129

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.7 bits (217), Expect = 2e-22
 Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 17/132 (12%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE---FINEV 76
           YE L  +           G   +G   K +    G ++  K L+  + +  E    ++EV
Sbjct: 6   YEVLYTI-----------GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEV 54

Query: 77  STIGRIHHVNVVQLLGFYSEGSKRAL--VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
           + +  + H N+V+      + +   L  V EY   G L   I       +    E +  V
Sbjct: 55  NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 114

Query: 135 ALGTARGIEYLH 146
                  ++  H
Sbjct: 115 MTQLTLALKECH 126

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.5 bits (216), Expect = 2e-22
 Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 11/115 (9%)

Query: 39  GKDGFGSVYKGQLH---TGGLIAVKMLENSNFSAV---EFINEVSTIGRIHHVNVVQLLG 92
           G   FG+V KG          +AVK+L+N         E + E + + ++ +  +V+++G
Sbjct: 16  GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIG 75

Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
              E     LV E    G L++++     + +    + + E+    + G++YL  
Sbjct: 76  IC-EAESWMLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEE 125

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 87.1 bits (215), Expect = 4e-22
 Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%)

Query: 16  VDNPSYEDLRKLLD--------SGLDLTWSSGKDGFGSVYKGQLHTGG----LIAVKML- 62
           +D  ++ED  + +         S + +    G   FG V  G L   G     +A+K L 
Sbjct: 4   IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK 63

Query: 63  -ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEG 121
              +     +F++E S +G+  H NV+ L G  ++ +   ++ E+M NGSLD  +  N+G
Sbjct: 64  SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG 123

Query: 122 RGKSFSWEKLHEVALGTARGIEYLHN 147
           +   F+  +L  +  G A G++YL +
Sbjct: 124 Q---FTVIQLVGMLRGIAAGMKYLAD 146

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 86.6 bits (214), Expect = 7e-22
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE--FINEVSTIGRIHHVNVVQLLGFYS 95
           G   F  V   +   T  L+A+K +        E    NE++ + +I H N+V L   Y 
Sbjct: 18  GTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYE 77

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            G    L+ + +  G L   I         ++      +       ++YLH+
Sbjct: 78  SGGHLYLIMQLVSGGELFDRIV----EKGFYTERDASRLIFQVLDAVKYLHD 125

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.2 bits (213), Expect = 1e-21
 Identities = 15/110 (13%), Positives = 40/110 (36%), Gaps = 4/110 (3%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
           G+  FG V++     +      K ++      V    E+S +    H N++ L   +   
Sbjct: 14  GRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESM 73

Query: 98  SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            +  +++E++    +   I          +  ++          +++LH+
Sbjct: 74  EELVMIFEFISGLDIFERI---NTSAFELNEREIVSYVHQVCEALQFLHS 120

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.3 bits (208), Expect = 3e-21
 Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 9/114 (7%)

Query: 39  GKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGF 93
           GK  FG+VY  +   +  ++A+K+L  +         +   EV     + H N+++L G+
Sbjct: 15  GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 74

Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           + + ++  L+ EY P G++ R +     +   F  ++        A  + Y H+
Sbjct: 75  FHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANALSYCHS 124

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.4 bits (203), Expect = 2e-20
 Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 7/112 (6%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
           G+  +G V       T   +AVK++  + +         E+     ++H NVV+  G   
Sbjct: 14  GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR 73

Query: 96  EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           EG+ + L  EY   G L   I P+                     G+ YLH 
Sbjct: 74  EGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLHG 121

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.3 bits (203), Expect = 2e-20
 Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 12/117 (10%)

Query: 39  GKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFY 94
           G+  F +VYKG    T   +A   L++   +  E   F  E   +  + H N+V+    +
Sbjct: 18  GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSW 77

Query: 95  SEGSKR----ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
               K      LV E M +G+L  ++     R K    + L        +G+++LH 
Sbjct: 78  ESTVKGKKCIVLVTELMTSGTLKTYLK----RFKVMKIKVLRSWCRQILKGLQFLHT 130

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.1 bits (202), Expect = 5e-20
 Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 28/137 (20%)

Query: 39  GKDGFGSVYKGQLH------TGGLIAVKMLENSNFSAV--EFINEVSTIGRI-HHVNVVQ 89
           G   FG V     +          +AVKML+    S+     ++E+  + ++  H N+V 
Sbjct: 46  GSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVN 105

Query: 90  LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGR-------------------GKSFSWEK 130
           LLG  +      L++EY   G L  ++     +                       ++E 
Sbjct: 106 LLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFED 165

Query: 131 LHEVALGTARGIEYLHN 147
           L   A   A+G+E+L  
Sbjct: 166 LLCFAYQVAKGMEFLEF 182

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 81.4 bits (200), Expect = 5e-20
 Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 28/137 (20%)

Query: 39  GKDGFGSVYKGQL------HTGGLIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQL 90
           G+  FG V++ +           ++AVKML  E S     +F  E + +    + N+V+L
Sbjct: 22  GEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKL 81

Query: 91  LGFYSEGSKRALVYEYMPNGSLDRHIF--------------------PNEGRGKSFSWEK 130
           LG  + G    L++EYM  G L+  +                      +       S  +
Sbjct: 82  LGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAE 141

Query: 131 LHEVALGTARGIEYLHN 147
              +A   A G+ YL  
Sbjct: 142 QLCIARQVAAGMAYLSE 158

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.4 bits (200), Expect = 6e-20
 Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 14/123 (11%)

Query: 39  GKDGFGSVYKGQLH------TGGLIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQL 90
           G+  FG VY+G             +A+K +    S    +EF+NE S +   +  +VV+L
Sbjct: 29  GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 88

Query: 91  LGFYSEGSKRALVYEYMPNGSLDRHIFP------NEGRGKSFSWEKLHEVALGTARGIEY 144
           LG  S+G    ++ E M  G L  ++        N       S  K+ ++A   A G+ Y
Sbjct: 89  LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAY 148

Query: 145 LHN 147
           L+ 
Sbjct: 149 LNA 151

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.8 bits (199), Expect = 8e-20
 Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 9/114 (7%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGF 93
           G+  F +V   + L T    A+K+LE  +            E   + R+ H   V+L   
Sbjct: 17  GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFT 76

Query: 94  YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           + +  K      Y  NG L ++I     +  SF               +EYLH 
Sbjct: 77  FQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLHG 126

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 81.3 bits (200), Expect = 1e-19
 Identities = 27/141 (19%), Positives = 53/141 (37%), Gaps = 25/141 (17%)

Query: 15  SVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFS----- 68
           ++++  +   R +           G+ GFG VY  +   TG + A+K L+          
Sbjct: 2   TMND--FSVHRII-----------GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE 48

Query: 69  --AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSF 126
             A+     +S +       +V +   +    K + + + M  G L  H+     +   F
Sbjct: 49  TLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS----QHGVF 104

Query: 127 SWEKLHEVALGTARGIEYLHN 147
           S   +   A     G+E++HN
Sbjct: 105 SEADMRFYAAEIILGLEHMHN 125

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.6 bits (198), Expect = 2e-19
 Identities = 31/155 (20%), Positives = 57/155 (36%), Gaps = 28/155 (18%)

Query: 6   SKVLVVLNRSVDNP------SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIA 58
           SKV  V+      P      SY D + +           G   FG VY+ +L  +G L+A
Sbjct: 1   SKVTTVVATPGQGPDRPQEVSYTDTKVI-----------GNGSFGVVYQAKLCDSGELVA 49

Query: 59  VKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR------ALVYEYMPNGSL 112
           +K +            E+  + ++ H N+V+L  F+    ++       LV +Y+P    
Sbjct: 50  IKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 106

Query: 113 DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                 +  +        +        R + Y+H+
Sbjct: 107 RVARHYSRAKQT-LPVIYVKLYMYQLFRSLAYIHS 140

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.8 bits (196), Expect = 3e-19
 Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 18/127 (14%)

Query: 39  GKDGFGSVYKGQLHTGGL---IAVKML--ENSNFSAVEFINEVSTIGRI-HHVNVVQLLG 92
           G+  FG V K ++   GL    A+K +    S     +F  E+  + ++ HH N++ LLG
Sbjct: 19  GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG 78

Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPN------------EGRGKSFSWEKLHEVALGTAR 140
                    L  EY P+G+L   +  +                 + S ++L   A   AR
Sbjct: 79  ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR 138

Query: 141 GIEYLHN 147
           G++YL  
Sbjct: 139 GMDYLSQ 145

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.0 bits (194), Expect = 3e-19
 Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 10/115 (8%)

Query: 39  GKDGFGSVYKGQLH----TGGLIAVKMLENSNFSAV--EFINEVSTIGRIHHVNVVQLLG 92
           G+  FG V++G           +A+K  +N    +V  +F+ E  T+ +  H ++V+L+G
Sbjct: 16  GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG 75

Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             +E     ++ E    G L   +     R  S     L   A   +  + YL +
Sbjct: 76  VITEN-PVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLES 126

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 4e-19
 Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 23/132 (17%)

Query: 39  GKDGFGSVYKGQL--------HTGGLIAVKML--ENSNFSAVEFINEVSTIGRI-HHVNV 87
           G+  FG V   +         +    +AVKML  + +     + I+E+  +  I  H N+
Sbjct: 22  GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNI 81

Query: 88  VQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRG------------KSFSWEKLHEVA 135
           + LLG  ++     ++ EY   G+L  ++      G            +  S + L   A
Sbjct: 82  INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 141

Query: 136 LGTARGIEYLHN 147
              ARG+EYL +
Sbjct: 142 YQVARGMEYLAS 153

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.6 bits (190), Expect = 1e-18
 Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 10/116 (8%)

Query: 39  GKDGFGSVYKGQLHTGG-----LIAVKMLENSNFSA--VEFINEVSTIGRIHHVNVVQLL 91
           G   FG VYKG L T        +A+K L+        V+F+ E   +G+  H N+++L 
Sbjct: 16  GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLE 75

Query: 92  GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           G  S+     ++ EYM NG+LD+       +   FS  +L  +  G A G++YL N
Sbjct: 76  GVISKYKPMMIITEYMENGALDKF---LREKDGEFSVLQLVGMLRGIAAGMKYLAN 128

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 76.7 bits (188), Expect = 2e-18
 Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 13/118 (11%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGF 93
           G  G   V+  + L     +AVK+L           + F  E      ++H  +V +   
Sbjct: 16  GFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDT 75

Query: 94  Y----SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                  G    +V EY+   +L   +          + ++  EV     + + + H 
Sbjct: 76  GEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADACQALNFSHQ 129

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.4 bits (190), Expect = 2e-18
 Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 22/133 (16%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFINEVSTI 79
           Y+   ++L          G    G V +     T    A+KML++      +   EV   
Sbjct: 13  YKVTSQVL----------GLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVELH 58

Query: 80  GRI-HHVNVVQLLGFY----SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
            R     ++V+++  Y    +      +V E +  G L   I   +   ++F+  +  E+
Sbjct: 59  WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEI 116

Query: 135 ALGTARGIEYLHN 147
                  I+YLH+
Sbjct: 117 MKSIGEAIQYLHS 129

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 75.3 bits (184), Expect = 8e-18
 Identities = 27/130 (20%), Positives = 43/130 (33%), Gaps = 18/130 (13%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAV---EFINEVS 77
           Y  L K+           G+  +G VYK Q + G   A+K +             I E+S
Sbjct: 4   YHGLEKI-----------GEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREIS 52

Query: 78  TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
            +  + H N+V+L        +  LV+E++                            L 
Sbjct: 53  ILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV----CEGGLESVTAKSFLLQ 108

Query: 138 TARGIEYLHN 147
              GI Y H+
Sbjct: 109 LLNGIAYCHD 118

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.3 bits (184), Expect = 1e-17
 Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 11/116 (9%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE------FINEVSTIGRIHHVNVVQLL 91
           G+  F +VYK +  +T  ++A+K ++  + S  +       + E+  +  + H N++ LL
Sbjct: 7   GEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLL 66

Query: 92  GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
             +   S  +LV+++M                   +   +    L T +G+EYLH 
Sbjct: 67  DAFGHKSNISLVFDFMETDLEVIIKD----NSLVLTPSHIKAYMLMTLQGLEYLHQ 118

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (181), Expect = 3e-17
 Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 22/134 (16%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSNFSAV--EFI 73
           ++ ++ L           G   FG+VYKG     G      +A+K L  +       E +
Sbjct: 11  FKKIKVL-----------GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 59

Query: 74  NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHE 133
           +E   +  + + +V +LLG     + + L+ + MP G L  ++        +   + L  
Sbjct: 60  DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR---EHKDNIGSQYLLN 115

Query: 134 VALGTARGIEYLHN 147
             +  A+G+ YL +
Sbjct: 116 WCVQIAKGMNYLED 129

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (181), Expect = 4e-17
 Identities = 18/133 (13%), Positives = 45/133 (33%), Gaps = 15/133 (11%)

Query: 18  NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAV--EFIN 74
            P Y +L  +           G+  +G V           +A+K +            + 
Sbjct: 7   GPRYTNLSYI-----------GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 55

Query: 75  EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
           E+  + R  H N++ +       +   +   Y+    +   ++    + +  S + +   
Sbjct: 56  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLY-KLLKTQHLSNDHICYF 114

Query: 135 ALGTARGIEYLHN 147
                RG++Y+H+
Sbjct: 115 LYQILRGLKYIHS 127

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 73.6 bits (180), Expect = 4e-17
 Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 16/121 (13%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAV----------EFINEVSTIGRIH-HVN 86
           G+     V +     T    AVK+++ +   +             + EV  + ++  H N
Sbjct: 12  GRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPN 71

Query: 87  VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
           ++QL   Y   +   LV++ M  G L  ++        + S ++  ++       I  LH
Sbjct: 72  IIQLKDTYETNTFFFLVFDLMKKGELFDYLT----EKVTLSEKETRKIMRALLEVICALH 127

Query: 147 N 147
            
Sbjct: 128 K 128

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 6e-17
 Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 10/116 (8%)

Query: 39  GKDGFGSVYKGQLH----TGGLIAVKMLENSNFSAV--EFINEVSTIGRIHHVNVVQLLG 92
           G+  FG VY G L          AVK L          +F+ E   +    H NV+ LLG
Sbjct: 36  GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 95

Query: 93  FYSEGSKRA-LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
                     +V  YM +G L   I        + + + L    L  A+G+++L +
Sbjct: 96  ICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLAS 148

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (176), Expect = 1e-16
 Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 22/131 (16%)

Query: 39  GKDGFGSVYKGQLH------TGGLIAVKML--ENSNFSAVEFINEVSTIGRI-HHVNVVQ 89
           G+  FG V +          T   +AVKML    ++      ++E+  +  I HH+NVV 
Sbjct: 22  GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 81

Query: 90  LLG-FYSEGSKRALVYEYMPNGSLDRHIF------------PNEGRGKSFSWEKLHEVAL 136
           LLG     G    ++ E+   G+L  ++             P +      + E L   + 
Sbjct: 82  LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 141

Query: 137 GTARGIEYLHN 147
             A+G+E+L +
Sbjct: 142 QVAKGMEFLAS 152

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.1 bits (176), Expect = 2e-16
 Identities = 31/135 (22%), Positives = 47/135 (34%), Gaps = 23/135 (17%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKML-------ENSNFSAVEF 72
           Y+   +L           G   F  V K +   TG   A K +            S  + 
Sbjct: 12  YDTGEEL-----------GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 60

Query: 73  INEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLH 132
             EVS +  I H NV+ L   Y   +   L+ E +  G L   +       +S + E+  
Sbjct: 61  EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA----EKESLTEEEAT 116

Query: 133 EVALGTARGIEYLHN 147
           E       G+ YLH+
Sbjct: 117 EFLKQILNGVYYLHS 131

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.1 bits (176), Expect = 2e-16
 Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 10/115 (8%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE----FINEVSTIGR-IHHVNVVQLLG 92
           GK  FG V+  +   T    A+K L+       +     + E   +     H  +  +  
Sbjct: 11  GKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFC 70

Query: 93  FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            +        V EY+  G L  HI         F   +    A     G+++LH+
Sbjct: 71  TFQTKENLFFVMEYLNGGDLMYHIQ----SCHKFDLSRATFYAAEIILGLQFLHS 121

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (175), Expect = 3e-16
 Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 15/131 (11%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAV---EFINEV 76
           Y DL+ +           G   +G+V       TG  +A+K L     S +       E+
Sbjct: 20  YRDLQPV-----------GSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYREL 68

Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVAL 136
             +  + H NV+ LL  ++         ++               + +    +++  +  
Sbjct: 69  RLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVY 128

Query: 137 GTARGIEYLHN 147
              +G+ Y+H 
Sbjct: 129 QMLKGLRYIHA 139

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.6 bits (172), Expect = 5e-16
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 7/111 (6%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSE 96
           G   FG +Y G  +  G  +A+K+         +   E      +   V +  +    +E
Sbjct: 16  GSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP-QLHIESKIYKMMQGGVGIPTIRWCGAE 74

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           G    +V E +     D   F      + FS + +  +A      IEY+H+
Sbjct: 75  GDYNVMVMELLGPSLEDLFNF----CSRKFSLKTVLLLADQMISRIEYIHS 121

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (164), Expect = 7e-15
 Identities = 23/144 (15%), Positives = 55/144 (38%), Gaps = 23/144 (15%)

Query: 14  RSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ--LHTGGLIAVKML------ENS 65
           R+     YE + ++           G+  +G V+K +   + G  +A+K +      E  
Sbjct: 4   RADQQ--YECVAEI-----------GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM 50

Query: 66  NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHI--FPNEGRG 123
             S +  +  +  +    H NVV+L    +           +    +D+ +  + ++   
Sbjct: 51  PLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPE 110

Query: 124 KSFSWEKLHEVALGTARGIEYLHN 147
                E + ++     RG+++LH+
Sbjct: 111 PGVPTETIKDMMFQLLRGLDFLHS 134

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 67.6 bits (164), Expect = 8e-15
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 24/130 (18%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFINEVSTI 79
           Y+ +RKL           G+  +  V++   +     + VK+L+       +   E+  +
Sbjct: 37  YQLVRKL-----------GRGKYSEVFEAINITNNEKVVVKILKPVKKK--KIKREIKIL 83

Query: 80  GRI-HHVNVVQLLGFYSEGSKR--ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVAL 136
             +    N++ L     +   R  ALV+E++ N    +         ++ +   +     
Sbjct: 84  ENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY-------QTLTDYDIRFYMY 136

Query: 137 GTARGIEYLH 146
              + ++Y H
Sbjct: 137 EILKALDYCH 146

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 9e-15
 Identities = 25/131 (19%), Positives = 53/131 (40%), Gaps = 18/131 (13%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFS---AVEFINEV 76
           ++ + K+           G+  +G VYK +   TG ++A+K +     +       I E+
Sbjct: 4   FQKVEKI-----------GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 52

Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVAL 136
           S +  ++H N+V+LL      +K  LV+E++         F +           +     
Sbjct: 53  SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 109

Query: 137 GTARGIEYLHN 147
              +G+ + H+
Sbjct: 110 QLLQGLAFCHS 120

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.5 bits (164), Expect = 1e-14
 Identities = 30/152 (19%), Positives = 57/152 (37%), Gaps = 26/152 (17%)

Query: 1   SWVFISKVLVVLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAV 59
            W   S+    L++      ++ ++ L           G   FG V   +   +G   A+
Sbjct: 29  KWETPSQNTAQLDQ------FDRIKTL-----------GTGSFGRVMLVKHKESGNHYAM 71

Query: 60  KMLENSNFSAVE----FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRH 115
           K+L+      ++     +NE   +  ++   +V+L   + + S   +V EY+  G +  H
Sbjct: 72  KILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSH 131

Query: 116 IFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           +     R   FS       A       EYLH+
Sbjct: 132 LR----RIGRFSEPHARFYAAQIVLTFEYLHS 159

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.6 bits (162), Expect = 1e-14
 Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 13/119 (10%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFS-------AVEFINEVSTIGRIH--HVNVV 88
           G  GFGSVY G  +     +A+K +E    S             EV  + ++      V+
Sbjct: 13  GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 72

Query: 89  QLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           +LL ++       L+ E               G       E            + + HN
Sbjct: 73  RLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCHN 128

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.3 bits (156), Expect = 1e-13
 Identities = 25/138 (18%), Positives = 55/138 (39%), Gaps = 22/138 (15%)

Query: 15  SVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE-- 71
           S+ +  ++ LR L           G   FG V+  +  H G   A+K+L+      ++  
Sbjct: 2   SLQD--FQILRTL-----------GTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQV 48

Query: 72  --FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWE 129
               +E   +  + H  ++++ G + +  +  ++ +Y+  G L   +  ++     F   
Sbjct: 49  EHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR----FPNP 104

Query: 130 KLHEVALGTARGIEYLHN 147
                A      +EYLH+
Sbjct: 105 VAKFYAAEVCLALEYLHS 122

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 62.9 bits (152), Expect = 3e-13
 Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 39  GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSE 96
           G+  FG +++G  L     +A+K     + +  +  +E  T   +     +  +  F  E
Sbjct: 14  GEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAP-QLRDEYRTYKLLAGCTGIPNVYYFGQE 72

Query: 97  GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
           G    LV + +     D      +  G+ FS + +   A      ++ +H 
Sbjct: 73  GLHNVLVIDLLGPSLEDLL----DLCGRKFSVKTVAMAAKQMLARVQSIHE 119

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.0 bits (152), Expect = 4e-13
 Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 29/148 (19%)

Query: 12  LNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFS-- 68
               V    YE L K+           G+  FG V+K +   TG  +A+K +   N    
Sbjct: 5   FCDEVSK--YEKLAKI-----------GQGTFGEVFKARHRKTGQKVALKKVLMENEKEG 51

Query: 69  -AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA--------LVYEYMPNGSLDRHIFPN 119
             +  + E+  +  + H NVV L+      +           LV+++  +          
Sbjct: 52  FPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN-- 109

Query: 120 EGRGKSFSWEKLHEVALGTARGIEYLHN 147
                 F+  ++  V      G+ Y+H 
Sbjct: 110 --VLVKFTLSEIKRVMQMLLNGLYYIHR 135

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (152), Expect = 4e-13
 Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 22/138 (15%)

Query: 15  SVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE-- 71
           ++++  ++ L+ L           GK  FG V   +   TG   A+K+L      A +  
Sbjct: 3   TMND--FDYLKLL-----------GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEV 49

Query: 72  --FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWE 129
              + E   +    H  +  L   +    +   V EY   G L  H+     R + F+ E
Sbjct: 50  AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS----RERVFTEE 105

Query: 130 KLHEVALGTARGIEYLHN 147
           +           +EYLH+
Sbjct: 106 RARFYGAEIVSALEYLHS 123

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (149), Expect = 8e-13
 Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 19/131 (14%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAV---EFINEV 76
           YE L K+           G+  +G+V+K +   T  ++A+K +   +         + E+
Sbjct: 4   YEKLEKI-----------GEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREI 52

Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVAL 136
             +  + H N+V+L        K  LV+E+            N         E +     
Sbjct: 53  CLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN----GDLDPEIVKSFLF 108

Query: 137 GTARGIEYLHN 147
              +G+ + H+
Sbjct: 109 QLLKGLGFCHS 119

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (148), Expect = 1e-12
 Identities = 27/147 (18%), Positives = 48/147 (32%), Gaps = 34/147 (23%)

Query: 11  VLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFS- 68
           VL R      Y++L+ +           G    G V           +A+K L     + 
Sbjct: 15  VLKR------YQNLKPI-----------GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ 57

Query: 69  --AVEFINEVSTIGRIHHVNVVQLLGFYS------EGSKRALVYEYMPNGSLDRHIFPNE 120
             A     E+  +  ++H N++ LL  ++      E     LV E M             
Sbjct: 58  THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---- 113

Query: 121 GRGKSFSWEKLHEVALGTARGIEYLHN 147
                   E++  +      GI++LH+
Sbjct: 114 ---MELDHERMSYLLYQMLCGIKHLHS 137

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 1e-12
 Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 15/131 (11%)

Query: 21  YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE---FINEV 76
           Y++L  +           G   +GSV       TG  +AVK L     S +       E+
Sbjct: 20  YQNLSPV-----------GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 68

Query: 77  STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVAL 136
             +  + H NV+ LL  ++         +      L      N  + +  + + +  +  
Sbjct: 69  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 128

Query: 137 GTARGIEYLHN 147
              RG++Y+H+
Sbjct: 129 QILRGLKYIHS 139

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 2e-11
 Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 14/119 (11%)

Query: 39  GKDGFGSVYKGQL----HTGGLIAVKMLENSNFS-----AVEFINEVSTIGRI-HHVNVV 88
           G   +G V+  +      TG L A+K+L+ +              E   +  I     +V
Sbjct: 33  GTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLV 92

Query: 89  QLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            L   +   +K  L+ +Y+  G L  H+     + + F+  ++          +E+LH 
Sbjct: 93  TLHYAFQTETKLHLILDYINGGELFTHLS----QRERFTEHEVQIYVGEIVLALEHLHK 147

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.0 bits (123), Expect = 3e-09
 Identities = 16/151 (10%), Positives = 46/151 (30%), Gaps = 24/151 (15%)

Query: 10  VVLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFS 68
                   +  Y  +RKL           G   F +V+  + +     +A+K++      
Sbjct: 4   AFKGEPYKDARYILVRKL-----------GWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY 52

Query: 69  AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNE-------- 120
                +E+  + R++  +  +     +    + L +      +    +   E        
Sbjct: 53  TEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLA 112

Query: 121 ----GRGKSFSWEKLHEVALGTARGIEYLHN 147
                  +      + +++     G++Y+H 
Sbjct: 113 LIKKYEHRGIPLIYVKQISKQLLLGLDYMHR 143

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 43.6 bits (102), Expect = 1e-06
 Identities = 18/120 (15%), Positives = 30/120 (25%), Gaps = 18/120 (15%)

Query: 39  GKDGFGSVYKGQLHTGGLIAVKMLENSNFSA-----------VEFINEVSTIGRIHHVNV 87
           G+    +V+       G   VK  +  + S            + F        R     +
Sbjct: 9   GEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRAL 68

Query: 88  VQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
            +L G          VY +  N  L   I   E            EV       +   ++
Sbjct: 69  QKLQGLAVPK-----VYAWEGNAVLMELIDAKELYRVRVENPD--EVLDMILEEVAKFYH 121

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	148
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.95
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.95
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.95
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.95
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.95
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.95
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.95
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.94
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.94
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.94
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.94
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.94
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.94
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.94
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.94
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.94
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.94
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.94
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.94
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.93
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.93
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.93
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.93
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.93
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.92
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.92
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.92
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.92
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.92
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.91
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.91
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.91
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.91
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.91
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.91
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.91
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.9
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.9
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.9
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.9
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.9
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.89
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.89
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.89
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.89
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.89
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.88
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.88
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.88
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.88
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.88
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.87
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.87
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.87
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.87
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.87
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.84
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.83
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.82
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.68
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.57
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.8
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	96.92
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	95.91
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	92.08
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	90.8

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.3e-28  Score=164.79  Aligned_cols=115  Identities=23%  Similarity=0.300  Sum_probs=101.5

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++|++.+.||+|+||.||+|.. .++..+|+|+++....  ..+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            5799999999999999999996 4789999999876433  234588999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |++|+|.+++    .....+++..+..++.|++.||+|||++
T Consensus        85 ~~gg~L~~~l----~~~~~l~e~~~~~i~~qi~~al~ylH~~  122 (271)
T d1nvra_          85 CSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGI  122 (271)
T ss_dssp             CTTEEGGGGS----BTTTBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCcHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            9999999998    4456799999999999999999999974

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=3.3e-28  Score=167.10  Aligned_cols=122  Identities=25%  Similarity=0.367  Sum_probs=110.0

Q ss_pred             HHhhhcCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      |++..++|++.+.||+|+||.||+|.+. ++..||+|+++......+++.+|+.+|..++||||+++++++.+.+..+++
T Consensus        12 wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (287)
T d1opja_          12 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII   91 (287)
T ss_dssp             TBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             cEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEE
Confidence            4677889999999999999999999964 688999999988777778899999999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||++|+|.+++..  .....+++..+..++.|++.||.|||++
T Consensus        92 ~E~~~~g~l~~~l~~--~~~~~~~~~~~~~i~~qi~~gL~yLH~~  134 (287)
T d1opja_          92 TEFMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKK  134 (287)
T ss_dssp             EECCTTCBHHHHHHH--SCTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eecccCcchHHHhhh--ccccchHHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999998844  2345689999999999999999999974

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.7e-28  Score=163.71  Aligned_cols=117  Identities=27%  Similarity=0.434  Sum_probs=106.7

Q ss_pred             hcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccC
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      .++|++.+.||+|+||.||+|...++..||+|+++......+++.+|+.++.+++||||+++++++..++..++||||++
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            46899999999999999999998778889999998877778889999999999999999999999999999999999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|+|.+++..   ....+++..+..++.|++.||.|||++
T Consensus        84 ~g~L~~~l~~---~~~~~~~~~~~~i~~qia~gl~~lH~~  120 (263)
T d1sm2a_          84 HGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA  120 (263)
T ss_dssp             TCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCcHHHHhhc---cccCCCHHHHHHHHHHHHHHHHhhhcc
Confidence            9999998743   335689999999999999999999974

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-27  Score=166.70  Aligned_cols=117  Identities=13%  Similarity=0.190  Sum_probs=105.1

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      .++|.+.+.||+|+||.||+|.. .+++.+|+|+++....+...+.+|+.+|..++||||+++++++.+++.+|+|||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~   83 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence            45799999999999999999996 47889999999876655666889999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||+|.+++..   ....+++..++.++.||+.||+|||++
T Consensus        84 ~gg~L~~~i~~---~~~~l~e~~~~~i~~qi~~al~yLH~~  121 (321)
T d1tkia_          84 SGLDIFERINT---SAFELNEREIVSYVHQVCEALQFLHSH  121 (321)
T ss_dssp             CCCBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            99999999832   234689999999999999999999974

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.1e-28  Score=166.11  Aligned_cols=125  Identities=26%  Similarity=0.406  Sum_probs=109.6

Q ss_pred             HHHHHHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           21 YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        21 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      +++-|+++.++|++.+.||+|+||.||+|..+++..||||+++......+.+.+|+.++.+++||||+++++++. .+..
T Consensus         4 ~~~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~   82 (272)
T d1qpca_           4 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPI   82 (272)
T ss_dssp             TTCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred             CCCCeecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCe
Confidence            556677888899999999999999999999887889999999887777788999999999999999999999875 4567


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++||||+++|+|.+++...  ....+++..+..++.||+.||.|||++
T Consensus        83 ~iv~Ey~~~g~L~~~~~~~--~~~~l~~~~~~~i~~qi~~gl~~lH~~  128 (272)
T d1qpca_          83 YIITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER  128 (272)
T ss_dssp             EEEEECCTTCBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEeCCCCcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            8999999999999877432  234589999999999999999999974

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.3e-28  Score=162.56  Aligned_cols=117  Identities=26%  Similarity=0.387  Sum_probs=106.9

Q ss_pred             hcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccC
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      .++|++.+.||+|+||.||+|+.+++..||+|.++......+++.+|+.++..++||||+++++++.+++..++||||++
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             hHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            46899999999999999999998878899999999877788889999999999999999999999999999999999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|+|.+++..   ....+++..++.++.|++.||+|||++
T Consensus        83 ~g~l~~~~~~---~~~~~~~~~~~~i~~qi~~gl~~LH~~  119 (258)
T d1k2pa_          83 NGCLLNYLRE---MRHRFQTQQLLEMCKDVCEAMEYLESK  119 (258)
T ss_dssp             TEEHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCcHHHhhhc---cccCCcHHHHHHHHHHHHHHHHHHhhc
Confidence            9999988633   345689999999999999999999974

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.5e-27  Score=163.11  Aligned_cols=116  Identities=27%  Similarity=0.308  Sum_probs=103.1

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-------CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-------SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      .+.|++.+.||+|+||.||+|+. .+|..+|+|++++...       ..+.+.+|+.+|++++||||+++++++.+.+..
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            35799999999999999999996 5789999999865322       245688999999999999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|||||++|+|.+++.    ....+++..++.++.|++.||+|||++
T Consensus        89 ~iv~E~~~gg~L~~~i~----~~~~l~~~~~~~~~~qi~~al~yLH~~  132 (293)
T d1jksa_          89 ILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL  132 (293)
T ss_dssp             EEEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEcCCCccccchhc----cccccchhHHHHHHHHHHHHHHhhhhc
Confidence            99999999999999983    345699999999999999999999974

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.5e-27  Score=160.85  Aligned_cols=116  Identities=22%  Similarity=0.397  Sum_probs=102.9

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCC----CcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      .++|++.+.||+|+||.||+|+. .++..+|+|++...    ......+.+|+.++..++||||+++++++.+++..++|
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~iv   84 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   84 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEE
Confidence            35799999999999999999996 47889999998642    22355688999999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||++|+|.+++    .....+++..+..++.||+.||+|||++
T Consensus        85 mEy~~~g~L~~~l----~~~~~l~e~~~~~i~~qi~~al~~lH~~  125 (263)
T d2j4za1          85 LEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK  125 (263)
T ss_dssp             EECCTTCBHHHHH----HHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeecCCCcHHHHH----hhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999998    3345689999999999999999999974

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=2.7e-27  Score=163.89  Aligned_cols=116  Identities=21%  Similarity=0.314  Sum_probs=99.6

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      .+.|++.+.||+|+||.||+|+. .+++.+|+|++......  ...+.+|+.+|..++||||+++++++.+++..++|||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            45799999999999999999996 47899999999764432  3447799999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+||+|.+++    .....+++..+..++.|++.||.|||++
T Consensus        88 ~~~gg~L~~~l----~~~~~l~e~~~~~~~~qi~~al~ylH~~  126 (307)
T d1a06a_          88 LVSGGELFDRI----VEKGFYTERDASRLIFQVLDAVKYLHDL  126 (307)
T ss_dssp             CCCSCBHHHHH----HTCSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccCCCcHHHhh----hcccCCCHHHHHHHHHHHHHHHHhhhhc
Confidence            99999999998    3456799999999999999999999974

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2e-27  Score=161.80  Aligned_cols=119  Identities=17%  Similarity=0.265  Sum_probs=101.8

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEe--CCeEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSE--GSKRAL  102 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~l  102 (148)
                      .++|++.+.||+|+||.||+|+. .+|+.||+|.+.......   +.+.+|+.++.+++||||+++++++.+  .+.+++
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence            36799999999999999999996 478999999998765543   347899999999999999999999864  466899


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |||||++|+|.+++.........+++..++.++.|++.||.|||+
T Consensus        83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~  127 (269)
T d2java1          83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR  127 (269)
T ss_dssp             EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999885433345679999999999999999999995

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.3e-27  Score=160.99  Aligned_cols=114  Identities=22%  Similarity=0.308  Sum_probs=102.0

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEecc
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      ++|++.+.||+|+||.||+|.. .+|..||+|++..... ..+.+.+|+.+++.++||||+++++++.+++..++|||||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            4699999999999999999995 5799999999876433 4566899999999999999999999999999999999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|+|.+++..     ..+++..+..++.|++.||.|||++
T Consensus       100 ~gg~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~yLH~~  135 (293)
T d1yhwa1         100 AGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN  135 (293)
T ss_dssp             TTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999987732     3589999999999999999999974

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.1e-27  Score=161.63  Aligned_cols=117  Identities=21%  Similarity=0.386  Sum_probs=103.2

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .+.|++.+.||+|+||.||+|+. .++..+|+|+++.... ..+.+.+|+.+|++++||||+++++++.+++..++||||
T Consensus        11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy   90 (288)
T d2jfla1          11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   90 (288)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence            35689999999999999999996 4788999999976443 345688999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |++|+|.+++..   ....+++..+..++.|++.||.|||++
T Consensus        91 ~~~g~L~~~~~~---~~~~l~e~~~~~i~~qi~~gL~ylH~~  129 (288)
T d2jfla1          91 CAGGAVDAVMLE---LERPLTESQIQVVCKQTLDALNYLHDN  129 (288)
T ss_dssp             CTTEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999999998732   235689999999999999999999974

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.94  E-value=1.4e-26  Score=162.93  Aligned_cols=117  Identities=19%  Similarity=0.298  Sum_probs=103.0

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc-CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF-SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .++|++.+.||+|+||.||+|.. .+|..||+|+++.... ....+.+|+.+|.+++||||+++++++.+++..++||||
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            35799999999999999999996 4799999999976543 234578999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |++|+|.+.+.   .....+++..++.++.||+.||.|||++
T Consensus       108 ~~gg~L~~~~~---~~~~~l~e~~~~~i~~qi~~aL~ylH~~  146 (352)
T d1koba_         108 LSGGELFDRIA---AEDYKMSEAEVINYMRQACEGLKHMHEH  146 (352)
T ss_dssp             CCCCBHHHHTT---CTTCCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCChHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999988773   2345699999999999999999999974

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.94  E-value=9.7e-27  Score=163.59  Aligned_cols=117  Identities=21%  Similarity=0.309  Sum_probs=103.4

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC-HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS-AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .++|++.+.||+|+||.||+|.. .+|..||+|++...... .+.+.+|+.+|.+++||||+++++++.+.+..++||||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            35899999999999999999996 47899999999765433 34588999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |++|+|.+++..   ....+++..+..++.||+.||.|||++
T Consensus       105 ~~gg~L~~~l~~---~~~~l~e~~~~~i~~qi~~aL~ylH~~  143 (350)
T d1koaa2         105 MSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHEN  143 (350)
T ss_dssp             CCSCBHHHHHTC---TTSCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            999999998832   345699999999999999999999974

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.1e-27  Score=164.59  Aligned_cols=117  Identities=21%  Similarity=0.312  Sum_probs=103.9

Q ss_pred             hhhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      +..++|++.+.||+|+||.||+|.. .+|..+|+|+++.....  ...+.+|+.+|+.++||||+++++++.+++..++|
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iV   82 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   82 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            4467899999999999999999996 47889999998764332  45688999999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |||+++|+|.+++.    ....+++..+..++.|++.||.|||+
T Consensus        83 mEy~~gg~L~~~l~----~~~~l~~~~~~~~~~qil~aL~yLH~  122 (322)
T d1s9ja_          83 MEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE  122 (322)
T ss_dssp             EECCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEcCCCCcHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999983    34568999999999999999999995

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.94  E-value=8.9e-27  Score=159.15  Aligned_cols=116  Identities=19%  Similarity=0.166  Sum_probs=102.5

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH----------HHHHHHHHHHhcCC-CCcccceeeEEEe
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA----------VEFINEVSTIGRIH-HVNVVQLLGFYSE   96 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~----------~~~~~e~~~l~~l~-~~~i~~~~~~~~~   96 (148)
                      .++|++.+.||+|+||+||+|+. .+++.+|+|+++......          +.+.+|+.++++++ ||||+++++++.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            46899999999999999999996 478899999997644321          24778999999997 9999999999999


Q ss_pred             CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           97 GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        97 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++..+||||||++|||.+++.    ....+++.++..++.||+.||+|||++
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~----~~~~l~e~~~~~~~~qi~~al~~lH~~  129 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLT----EKVTLSEKETRKIMRALLEVICALHKL  129 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CcceEEEEEcCCCchHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999999999999993    345799999999999999999999974

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.4e-27  Score=160.63  Aligned_cols=116  Identities=22%  Similarity=0.233  Sum_probs=103.1

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCC----CcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      .++|++.+.||+|+||.||+|.. .+++.+|+|++...    ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv   86 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG   86 (288)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEE
T ss_pred             CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEE
Confidence            36799999999999999999996 47899999998652    22345688999999999999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||++|+|.+++    ...+.+++..+..++.|++.||.|||++
T Consensus        87 mEy~~gg~L~~~~----~~~~~l~e~~~~~~~~qi~~al~ylH~~  127 (288)
T d1uu3a_          87 LSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK  127 (288)
T ss_dssp             ECCCTTEEHHHHH----HHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEccCCCCHHHhh----hccCCCCHHHHHHHHHHHHHHHHhhccc
Confidence            9999999999988    3446799999999999999999999974

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=1.8e-26  Score=159.82  Aligned_cols=114  Identities=25%  Similarity=0.350  Sum_probs=100.5

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH----HHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA----VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      .|+..+.||+|+||.||+|+. .++..||+|++.......    +.+.+|+.+|.+++||||+++++++.+++..++|||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            489999999999999999995 478899999997755432    347899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||.+|++..++    .....+++..++.++.||+.||.|||++
T Consensus        96 ~~~~g~l~~~~----~~~~~l~e~~~~~i~~qi~~aL~yLH~~  134 (309)
T d1u5ra_          96 YCLGSASDLLE----VHKKPLQEVEIAAVTHGALQGLAYLHSH  134 (309)
T ss_dssp             CCSEEHHHHHH----HHTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ecCCCchHHHH----HhCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999987666    3345689999999999999999999974

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.7e-27  Score=160.03  Aligned_cols=121  Identities=26%  Similarity=0.405  Sum_probs=106.3

Q ss_pred             HHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      |++..++|++.+.||+|+||.||+|..+++..||+|+++......+.+.+|+.++.+++||||+++++++. .+..++||
T Consensus        12 ~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~   90 (285)
T d1fmka3          12 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVT   90 (285)
T ss_dssp             SBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             eEcCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEE
Confidence            44567789999999999999999999877778999999887777888999999999999999999999885 45688999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+++|+|..++...  ..+.+++..+..++.||+.||.|||++
T Consensus        91 Ey~~~g~l~~~~~~~--~~~~l~~~~~~~i~~~i~~gl~~LH~~  132 (285)
T d1fmka3          91 EYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM  132 (285)
T ss_dssp             CCCTTCBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EecCCCchhhhhhhc--ccccchHHHHHHHHHHHHHHHHHHhhh
Confidence            999999999887432  234589999999999999999999974

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.8e-26  Score=154.98  Aligned_cols=113  Identities=24%  Similarity=0.351  Sum_probs=97.0

Q ss_pred             ceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEe----CCeEEEE
Q 041447           32 LDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSE----GSKRALV  103 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~lv  103 (148)
                      |++.+.||+|+||.||+|.. .++..+|+|.+......   .+.+.+|+++|++++||||+++++++..    .+.+++|
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            46788899999999999996 47889999998764433   3458899999999999999999999865    3558999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||++|+|.+++.    ....+++..+..++.||+.||+|||++
T Consensus        91 mE~~~~g~L~~~l~----~~~~~~~~~~~~~~~qi~~gl~yLH~~  131 (270)
T d1t4ha_          91 TELMTSGTLKTYLK----RFKVMKIKVLRSWCRQILKGLQFLHTR  131 (270)
T ss_dssp             EECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             EeCCCCCcHHHHHh----ccccccHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999983    345689999999999999999999974

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.5e-26  Score=160.71  Aligned_cols=117  Identities=23%  Similarity=0.292  Sum_probs=104.0

Q ss_pred             hhcCceeecccccccceEEEEEEe-cCCCEEEEEEccCC----CcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      ..++|++++.||+|+||.||+|+. .+++.+|+|++++.    ......+.+|+.+|+.++||||+++++++.+.+.+|+
T Consensus         3 ~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~i   82 (337)
T d1o6la_           3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred             chHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccccccc
Confidence            456899999999999999999996 57999999999752    2234568899999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||||++|+|.+++    .....+++..++.++.|++.||+|||++
T Consensus        83 v~ey~~gg~L~~~~----~~~~~~~e~~~~~~~~qil~al~ylH~~  124 (337)
T d1o6la_          83 VMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSR  124 (337)
T ss_dssp             EEECCTTCBHHHHH----HHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ceeccCCCchhhhh----hcccCCcHHHHHHHHHHHhhhhhhhhhc
Confidence            99999999999988    3446789999999999999999999974

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=5.4e-26  Score=155.19  Aligned_cols=118  Identities=32%  Similarity=0.542  Sum_probs=100.0

Q ss_pred             HHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      |++..++|.+.+.||+|+||.||+|+.+  ..+|+|+++.....   .+.+.+|+.++.+++||||+++++++. .+..+
T Consensus         3 wei~~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~   79 (276)
T d1uwha_           3 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLA   79 (276)
T ss_dssp             CBCCTTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred             cccccccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEE
Confidence            3566788999999999999999999864  36999999764333   345889999999999999999999764 45689


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||||++|+|.+++..   ....+++..+..++.|++.||+|||++
T Consensus        80 lv~Ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~gl~yLH~~  123 (276)
T d1uwha_          80 IVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAK  123 (276)
T ss_dssp             EEEECCCEEEHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecCCCCCHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999998843   235689999999999999999999974

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=9.4e-26  Score=155.57  Aligned_cols=117  Identities=29%  Similarity=0.493  Sum_probs=98.9

Q ss_pred             hcCceeecccccccceEEEEEEec-CCC---EEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGG---LIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~---~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l  102 (148)
                      .++|++.+.||+|+||.||+|... +++   .+|+|.+......  .+.+.+|+.+|.+++||||+++++++..++..++
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~i  104 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMI  104 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            467899999999999999999853 332   5888888653332  3458999999999999999999999999999999


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||||++|+|.+++..   ....+++.++..++.|++.||.|||++
T Consensus       105 v~Ey~~~g~L~~~~~~---~~~~l~~~~~~~i~~qia~gl~yLH~~  147 (299)
T d1jpaa_         105 ITEFMENGSLDSFLRQ---NDGQFTVIQLVGMLRGIAAGMKYLADM  147 (299)
T ss_dssp             EEECCTTEEHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecCCCcceeeecc---ccCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            9999999999998742   345689999999999999999999974

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.6e-25  Score=155.40  Aligned_cols=115  Identities=18%  Similarity=0.305  Sum_probs=102.4

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCC----CcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|++++.||+|+||.||+|+. .+|..||+|+++..    ....+.+.+|+.++..++||||+++++++.+++..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            5799999999999999999996 57999999998642    223456889999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||.||+|..++    .....+++..+..++.||+.||.|||++
T Consensus        84 E~~~gg~l~~~~----~~~~~~~~~~~~~~~~qi~~al~~lH~~  123 (316)
T d1fota_          84 DYIEGGELFSLL----RKSQRFPNPVAKFYAAEVCLALEYLHSK  123 (316)
T ss_dssp             CCCCSCBHHHHH----HHTSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eecCCccccccc----cccccccccHHHHHHHHHHHhhhhhccC
Confidence            999999999888    4456689999999999999999999974

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.5e-25  Score=152.47  Aligned_cols=117  Identities=21%  Similarity=0.344  Sum_probs=97.5

Q ss_pred             hhcCceeecc-cccccceEEEEEEec---CCCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           28 LDSGLDLTWS-SGKDGFGSVYKGQLH---TGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        28 ~~~~~~~~~~-lg~g~~~~v~~~~~~---~~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      ..+++.+.+. ||+|+||.||+|..+   ++..||||+++....  ..+.+.+|+.+|.+++||||+++++++.. +..+
T Consensus         6 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~   84 (285)
T d1u59a_           6 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALM   84 (285)
T ss_dssp             CGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEE
T ss_pred             cccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEE
Confidence            3457788885 999999999999743   345799999976432  23468899999999999999999998864 5689


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||||++|+|.+++.   .....+++..+..++.|++.||+|||++
T Consensus        85 lvmE~~~~g~L~~~l~---~~~~~l~~~~~~~i~~qi~~gL~ylH~~  128 (285)
T d1u59a_          85 LVMEMAGGGPLHKFLV---GKREEIPVSNVAELLHQVSMGMKYLEEK  128 (285)
T ss_dssp             EEEECCTTEEHHHHHT---TCTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeCCCCcHHHHhh---ccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999873   2345689999999999999999999974

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.3e-25  Score=156.09  Aligned_cols=115  Identities=21%  Similarity=0.310  Sum_probs=99.2

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCC----CcCHHHHHHHHHHHh-cCCCCcccceeeEEEeCCeEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS----NFSAVEFINEVSTIG-RIHHVNVVQLLGFYSEGSKRALV  103 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~----~~~~~~~~~e~~~l~-~l~~~~i~~~~~~~~~~~~~~lv  103 (148)
                      ++|.+.+.||+|+||.||+|+. .+++.||+|++++.    ....+.+..|...+. .++||||+++++++.+++..|+|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            5799999999999999999996 47899999999652    223445667776655 68999999999999999999999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+++|+|.+++.    ....+++..+..++.||+.||+|||++
T Consensus        82 mEy~~~g~L~~~i~----~~~~~~e~~~~~~~~qi~~al~ylH~~  122 (320)
T d1xjda_          82 MEYLNGGDLMYHIQ----SCHKFDLSRATFYAAEIILGLQFLHSK  122 (320)
T ss_dssp             EECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeecCCCcHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999983    445689999999999999999999974

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.92  E-value=1.3e-25  Score=153.25  Aligned_cols=116  Identities=16%  Similarity=0.189  Sum_probs=100.2

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCC----e
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGS----K   99 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~   99 (148)
                      .++|++.+.||+|+||.||+|.. .+++.+|+|+++.....    ...+.+|+.+++.++||||+++++++...+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            45799999999999999999996 57899999999765442    234789999999999999999999987643    3


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .|+|||||+||+|.+++    ...+.+++..+..++.|++.||+|||++
T Consensus        86 ~~lvmE~~~g~~L~~~~----~~~~~l~~~~~~~i~~qi~~al~~lH~~  130 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIV----HTEGPMTPKRAIEVIADACQALNFSHQN  130 (277)
T ss_dssp             EEEEEECCCEEEHHHHH----HHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEECCCCCEehhhh----cccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            88999999999999887    3445789999999999999999999974

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.2e-26  Score=155.25  Aligned_cols=120  Identities=32%  Similarity=0.441  Sum_probs=100.6

Q ss_pred             HHhhhcCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEe-CCeEEEE
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE-GSKRALV  103 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv  103 (148)
                      |++..++|++++.||+|+||.||+|..+ |..||+|+++.+ ...+.+.+|+.++++++||||+++++++.. .+..++|
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv   79 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV   79 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC-C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEE
Confidence            3556678999999999999999999985 778999999753 345678999999999999999999998854 4668999


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||+++|+|.+++..+  ....+++..+..++.||+.||.|||++
T Consensus        80 ~ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~al~ylH~~  122 (262)
T d1byga_          80 TEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN  122 (262)
T ss_dssp             ECCCTTEEHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHhhccccccC
Confidence            9999999999998432  223489999999999999999999974

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.3e-25  Score=155.21  Aligned_cols=128  Identities=23%  Similarity=0.332  Sum_probs=102.8

Q ss_pred             HHHHHHhhhcCceeecccccccceEEEEEEec-CC-----CEEEEEEccCCCc--CHHHHHHHHHHHhcC-CCCccccee
Q 041447           21 YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLH-TG-----GLIAVKMLENSNF--SAVEFINEVSTIGRI-HHVNVVQLL   91 (148)
Q Consensus        21 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~-----~~~avk~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~   91 (148)
                      ++.-|+++.++|++.+.||+|+||.||+|+.. .+     ..||+|.+.....  ....+.+|+.++.++ +||||++++
T Consensus        28 ~~~kwei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~  107 (325)
T d1rjba_          28 YDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLL  107 (325)
T ss_dssp             CCGGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCccccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEE
Confidence            34445677889999999999999999999853 22     2689998865322  344588999999988 899999999


Q ss_pred             eEEEeCCeEEEEEeccCCCChhhcccccCC-------------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           92 GFYSEGSKRALVYEYMPNGSLDRHIFPNEG-------------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        92 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++.+.+..++|||||++|+|.+++..+..                   ....+++..++.++.|++.||+|||++
T Consensus       108 ~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~  183 (325)
T d1rjba_         108 GACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK  183 (325)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999854321                   124589999999999999999999974

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.7e-25  Score=153.98  Aligned_cols=131  Identities=22%  Similarity=0.360  Sum_probs=108.6

Q ss_pred             CCcHHHHHHhhhcCceeecccccccceEEEEEEe------cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCccc
Q 041447           18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVV   88 (148)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~   88 (148)
                      ..+++..|++..++|++++.||+|+||.||+|+.      .++..+|+|+++.....  ...+.+|+.++..+ +||||+
T Consensus        11 ~~~~~~~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv   90 (311)
T d1t46a_          11 QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV   90 (311)
T ss_dssp             TSCCCGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             cCCCcccccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEE
Confidence            3445556778889999999999999999999974      24568999999764432  33588999999998 699999


Q ss_pred             ceeeEEEeCCeEEEEEeccCCCChhhcccccCC--------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           89 QLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEG--------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        89 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++++++.+++..+++||||++|+|.+++.....              ....+++..+..++.||+.||.|||++
T Consensus        91 ~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~  164 (311)
T d1t46a_          91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK  164 (311)
T ss_dssp             CEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999998854321              233589999999999999999999974

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.91  E-value=1.4e-24  Score=148.67  Aligned_cols=115  Identities=21%  Similarity=0.239  Sum_probs=102.2

Q ss_pred             cCceeecccccccceEEEEEEecCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ++|++.+.||+|+||.||+|+.++++.||+|+++.....   ...+.+|+.+|+.++||||+++++++...+..++++|+
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            579999999999999999999888999999999664332   45688999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.++.+..+.    ...+.+++..+..++.|++.||+|||++
T Consensus        82 ~~~~~~~~~~----~~~~~l~~~~~~~i~~qi~~~L~~LH~~  119 (286)
T d1ob3a_          82 LDQDLKKLLD----VCEGGLESVTAKSFLLQLLNGIAYCHDR  119 (286)
T ss_dssp             CSEEHHHHHH----TSTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ehhhhHHHHH----hhcCCcchhhhHHHHHHHHHHHHHhccC
Confidence            9887776665    4457799999999999999999999974

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=7.2e-25  Score=149.64  Aligned_cols=108  Identities=22%  Similarity=0.382  Sum_probs=89.7

Q ss_pred             cccccccceEEEEEEec---CCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEeccCC
Q 041447           36 WSSGKDGFGSVYKGQLH---TGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPN  109 (148)
Q Consensus        36 ~~lg~g~~~~v~~~~~~---~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~  109 (148)
                      ++||+|+||.||+|...   +++.||+|+++....+   .+.+.+|+.+|.+++||||+++++++.. +..++|||||++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            46999999999999853   3568999998654332   3458899999999999999999999865 457899999999


Q ss_pred             CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          110 GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       110 g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+|.+++.    ....+++..+..++.||+.||.|||++
T Consensus        92 g~L~~~l~----~~~~l~~~~~~~i~~qi~~gl~ylH~~  126 (277)
T d1xbba_          92 GPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES  126 (277)
T ss_dssp             EEHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CcHHHHHh----hccCCCHHHHHHHHHHHHHHHhhHHhC
Confidence            99999883    445689999999999999999999974

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.4e-24  Score=149.59  Aligned_cols=116  Identities=21%  Similarity=0.346  Sum_probs=97.1

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++|++.+.||+|+||.||+|.. .+++.||+|+++....   ....+.+|+.++++++||||+++++++.+++..++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            5899999999999999999996 5789999999965432   24568899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |+.++ +.+++..  .....+++..+..++.|++.||+|||++
T Consensus        82 ~~~~~-~~~~~~~--~~~~~l~e~~~~~~~~qil~~L~yLH~~  121 (298)
T d1gz8a_          82 FLHQD-LKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSH  121 (298)
T ss_dssp             CCSEE-HHHHHHH--TTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ecCCc-hhhhhhh--hcccCCCHHHHHHHHHHHHHHHHHhhcC
Confidence            99774 4444322  2345689999999999999999999974

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.2e-24  Score=149.30  Aligned_cols=121  Identities=25%  Similarity=0.397  Sum_probs=100.2

Q ss_pred             hhcCceeecccccccceEEEEEEec-CCC--EEEEEEccCCCc--CHHHHHHHHHHHhcC-CCCcccceeeEEEeCCeEE
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH-TGG--LIAVKMLENSNF--SAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~--~~avk~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~  101 (148)
                      ..++|++.+.||+|+||.||+|.+. ++.  .+|+|.++....  ..+.+.+|+.+|..+ +||||+++++++.+.+..+
T Consensus         8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~   87 (309)
T d1fvra_           8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   87 (309)
T ss_dssp             CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred             CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence            3468999999999999999999864 444  467887754322  344689999999998 6999999999999999999


Q ss_pred             EEEeccCCCChhhccccc------------CCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPN------------EGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~------------~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +||||+++|+|.+++...            ......+++..+..++.||+.||.|||++
T Consensus        88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~  146 (309)
T d1fvra_          88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK  146 (309)
T ss_dssp             EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC
Confidence            999999999999998543            12346799999999999999999999974

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=1.1e-24  Score=152.99  Aligned_cols=115  Identities=23%  Similarity=0.260  Sum_probs=102.1

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCC----CcCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENS----NFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVY  104 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~  104 (148)
                      ++|++++.||+|+||.||+|+. .+|..+|+|++...    ....+.+.+|+.+|..++||||+++++++.+.+..+++|
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            5799999999999999999996 47999999998642    223456889999999999999999999999999999999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||+.+|+|.+++.    ....+++..+..++.||+.||.|||++
T Consensus       121 e~~~~g~l~~~l~----~~~~l~e~~~~~i~~qi~~aL~yLH~~  160 (350)
T d1rdqe_         121 EYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYLHSL  160 (350)
T ss_dssp             ECCTTCBHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccccchhhhHh----hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999883    345689999999999999999999974

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.91  E-value=1.2e-24  Score=153.61  Aligned_cols=116  Identities=22%  Similarity=0.312  Sum_probs=98.1

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc----CHHHHHH---HHHHHhcCCCCcccceeeEEEeCCeE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF----SAVEFIN---EVSTIGRIHHVNVVQLLGFYSEGSKR  100 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~----~~~~~~~---e~~~l~~l~~~~i~~~~~~~~~~~~~  100 (148)
                      .++|++.+.||+|+||.||+|+. .+|..||+|++.....    ....+.+   ++.++..++||||+++++++.+.+..
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            46899999999999999999996 4799999999865222    1222333   46677888999999999999999999


Q ss_pred             EEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          101 ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       101 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++|||||++|+|.+++.    ....+++..++.++.||+.||+|||++
T Consensus        83 ~ivmE~~~gg~L~~~l~----~~~~~~e~~~~~~~~qi~~aL~ylH~~  126 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLS----QHGVFSEADMRFYAAEIILGLEHMHNR  126 (364)
T ss_dssp             EEEECCCCSCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEecCCCcHHHHHH----hcccccHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999999983    345689999999999999999999974

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.1e-24  Score=148.42  Aligned_cols=119  Identities=21%  Similarity=0.323  Sum_probs=99.5

Q ss_pred             HhhhcCceeecccccccceEEEEEEec----CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCe
Q 041447           26 KLLDSGLDLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~~~v~~~~~~----~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   99 (148)
                      ++.+++|++.+.||+|+||.||+|.+.    .+..+|+|.++.....  ...+.+|+.++++++||||+++++++. .+.
T Consensus         3 ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~   81 (273)
T d1mp8a_           3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP   81 (273)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred             CcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCe
Confidence            456789999999999999999999853    2346888888654332  345889999999999999999999985 567


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++||||+++|++.+++..   ....+++..+..++.|++.||.|||++
T Consensus        82 ~~iv~E~~~~g~l~~~~~~---~~~~l~~~~~~~~~~qi~~gl~ylH~~  127 (273)
T d1mp8a_          82 VWIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLSTALAYLESK  127 (273)
T ss_dssp             CEEEEECCTTEEHHHHHHH---TTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEeccCCcHHhhhhc---cCCCCCHHHHHHHHHHHHHHhhhhccc
Confidence            8999999999999987632   335689999999999999999999974

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.3e-24  Score=146.75  Aligned_cols=119  Identities=32%  Similarity=0.491  Sum_probs=100.3

Q ss_pred             hhhcCceeecccccccceEEEEEEecC-C----CEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCCe
Q 041447           27 LLDSGLDLTWSSGKDGFGSVYKGQLHT-G----GLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        27 ~~~~~~~~~~~lg~g~~~~v~~~~~~~-~----~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   99 (148)
                      +..++|++.+.||+|+||.||+|..+. +    ..||+|.+......  ...+.+|+.++.+++||||+++++++...+.
T Consensus         4 i~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~   83 (283)
T d1mqba_           4 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP   83 (283)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             CCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCc
Confidence            345679999999999999999998542 2    36999998664332  2358899999999999999999999999999


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++|||+.+|++.+.+..   ....+++..+..++.|++.||.|||++
T Consensus        84 ~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~i~~gl~~lH~~  129 (283)
T d1mqba_          84 MMIITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLANM  129 (283)
T ss_dssp             EEEEEECCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEEecccCcchhhhhc---ccccccHHHHHHHHHHHHHhhhhcccc
Confidence            9999999999999887733   335689999999999999999999974

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3e-24  Score=147.89  Aligned_cols=111  Identities=23%  Similarity=0.329  Sum_probs=93.1

Q ss_pred             eecccccccceEEEEEEe-cCCCEEEEEEccCCCcC------HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEec
Q 041447           34 LTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS------AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        34 ~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      .++.||+|+||+||+|+. .+|+.||+|+++.....      ...+.+|+.++..++||||+++++++..++..++||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            357899999999999995 47899999999764332      23478999999999999999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.++++....    .....+++..+..++.||+.||+|||++
T Consensus        82 ~~~~~~~~~~----~~~~~l~~~~~~~~~~qil~aL~~lH~~  119 (299)
T d1ua2a_          82 METDLEVIIK----DNSLVLTPSHIKAYMLMTLQGLEYLHQH  119 (299)
T ss_dssp             CSEEHHHHHT----TCCSSCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred             hcchHHhhhh----hcccCCCHHHHHHHHHHHHHHHHHhhcc
Confidence            9998777665    4456789999999999999999999974

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.8e-24  Score=149.51  Aligned_cols=114  Identities=22%  Similarity=0.224  Sum_probs=95.5

Q ss_pred             hcCceeec-ccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhc-CCCCcccceeeEEEe----CCeEE
Q 041447           29 DSGLDLTW-SSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGR-IHHVNVVQLLGFYSE----GSKRA  101 (148)
Q Consensus        29 ~~~~~~~~-~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~----~~~~~  101 (148)
                      .++|.+.+ .||+|+||.||+|+. .+++.||+|+++.    .....+|+.++.+ .+||||+++++++.+    ...+|
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            35788875 699999999999996 5789999999864    3457789988655 479999999999875    46689


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|||||+||+|.+++..+  ....+++..++.++.|++.||+|||++
T Consensus        86 ivmEy~~gg~L~~~i~~~--~~~~l~e~~~~~i~~qi~~al~ylH~~  130 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI  130 (335)
T ss_dssp             EEEECCCSEEHHHHHHSC--SCCCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEECCCCCcHHHHHHhc--CCCCcCHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999999998432  235699999999999999999999974

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=1.1e-23  Score=145.32  Aligned_cols=124  Identities=23%  Similarity=0.405  Sum_probs=104.0

Q ss_pred             HHhhhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEe
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSE   96 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~   96 (148)
                      .+++.++|++++.||+|+||.||+|+..      ++..||||+++.....  ..++.+|+.++++++||||+++++++..
T Consensus         8 ~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~   87 (301)
T d1lufa_           8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV   87 (301)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             ccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeecc
Confidence            3456788999999999999999999853      3568999999764433  3458999999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChhhcccccC--------------------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           97 GSKRALVYEYMPNGSLDRHIFPNE--------------------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        97 ~~~~~lv~e~~~~g~L~~~l~~~~--------------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+..+++|||+++|+|.+++....                    .....+++..+..++.|++.||+|||++
T Consensus        88 ~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~  159 (301)
T d1lufa_          88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER  159 (301)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC
Confidence            999999999999999999885321                    1124588999999999999999999974

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.2e-23  Score=142.92  Aligned_cols=115  Identities=17%  Similarity=0.273  Sum_probs=101.9

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCCeEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++|++.+.||+|+||+||+|+. .++..||+|+++.....   ...+.+|+.+++.++||||+++++++.+....+++++
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            4799999999999999999996 57889999998664432   3458899999999999999999999999999999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ++.++++..++    ...+.+++..+..++.|++.||+|||++
T Consensus        82 ~~~~~~l~~~~----~~~~~~~~~~~~~~~~q~~~aL~~lH~~  120 (292)
T d1unla_          82 FCDQDLKKYFD----SCNGDLDPEIVKSFLFQLLKGLGFCHSR  120 (292)
T ss_dssp             CCSEEHHHHHH----HTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ecccccccccc----ccccccchhHHHHHHHHHHHHHHHhhcC
Confidence            99999888877    4456789999999999999999999974

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=7.7e-24  Score=146.47  Aligned_cols=125  Identities=25%  Similarity=0.376  Sum_probs=105.2

Q ss_pred             HHHhhhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcCH--HHHHHHHHHHhcCCCCcccceeeEEE
Q 041447           24 LRKLLDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFSA--VEFINEVSTIGRIHHVNVVQLLGFYS   95 (148)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~~~~~~~   95 (148)
                      .|++..++|++.+.||+|+||.||+|.+.      ++..||||+++......  ..+.+|+.++++++||||+++++.+.
T Consensus        14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~   93 (308)
T d1p4oa_          14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   93 (308)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred             ceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe
Confidence            36788889999999999999999999842      35689999997644322  34789999999999999999999999


Q ss_pred             eCCeEEEEEeccCCCChhhcccccC------CCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           96 EGSKRALVYEYMPNGSLDRHIFPNE------GRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        96 ~~~~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..+..++||||+.+|+|.+++..+.      .....+++..+..++.|++.||.|||++
T Consensus        94 ~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~  152 (308)
T d1p4oa_          94 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN  152 (308)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            9999999999999999999875431      1224478999999999999999999974

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1e-23  Score=145.27  Aligned_cols=124  Identities=27%  Similarity=0.371  Sum_probs=98.5

Q ss_pred             HHhhhcCceeecccccccceEEEEEEec--------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCcccceeeE
Q 041447           25 RKLLDSGLDLTWSSGKDGFGSVYKGQLH--------TGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQLLGF   93 (148)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~--------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~~~~   93 (148)
                      |.++.++|.+++.||+|+||.||+|+..        ++..||+|.+......  ...+.+|...+.++ +||||++++++
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~   87 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA   87 (299)
T ss_dssp             TBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccc
Confidence            5677889999999999999999999842        1247999999764432  34577888888887 79999999999


Q ss_pred             EEeCCeEEEEEeccCCCChhhcccccCC------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           94 YSEGSKRALVYEYMPNGSLDRHIFPNEG------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        94 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.+++..++|||||++|+|.+++.....            ....+++..++.++.|++.||.|||++
T Consensus        88 ~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~  154 (299)
T d1fgka_          88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK  154 (299)
T ss_dssp             ECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC
Confidence            9999999999999999999999854321            235689999999999999999999974

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=6.3e-24  Score=144.65  Aligned_cols=117  Identities=29%  Similarity=0.415  Sum_probs=89.8

Q ss_pred             hhcCceeecccccccceEEEEEEec--CC--CEEEEEEccCCCcC----HHHHHHHHHHHhcCCCCcccceeeEEEeCCe
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQLH--TG--GLIAVKMLENSNFS----AVEFINEVSTIGRIHHVNVVQLLGFYSEGSK   99 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~~--~~--~~~avk~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   99 (148)
                      ..++|++.+.||+|+||.||+|+..  ++  ..||+|+++.....    .+++.+|+.++.+++||||+++++++.+ +.
T Consensus         6 ~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~   84 (273)
T d1u46a_           6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PP   84 (273)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             chHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cc
Confidence            3467999999999999999999842  23  36899998764321    3458899999999999999999999975 46


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++||||+++|++.+.+..   ....+++..+..++.|++.||.|||++
T Consensus        85 ~~lv~e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~qi~~gl~ylH~~  130 (273)
T d1u46a_          85 MKMVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYLESK  130 (273)
T ss_dssp             CEEEEECCTTCBHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hheeeeeecCcchhhhhhc---ccCCCCHHHHHHHHHHHHHHHHHhhhC
Confidence            7899999999999987743   235689999999999999999999974

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.89  E-value=3.6e-23  Score=144.06  Aligned_cols=111  Identities=14%  Similarity=0.277  Sum_probs=97.1

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcccceeeEEEe--CCeEEEEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVNVVQLLGFYSE--GSKRALVY  104 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~--~~~~~lv~  104 (148)
                      .++|++++.||+|+||+||+|+. .+++.||+|+++..  ....+.+|+.+|..++ ||||+++++++..  ....++||
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH--HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            46799999999999999999996 57899999998743  4567889999999995 9999999999875  45689999


Q ss_pred             eccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          105 EYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       105 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      |||.+++|....       +.+++..+..++.||+.||+|||++
T Consensus       112 e~~~~~~L~~~~-------~~l~e~~i~~i~~qil~aL~~LH~~  148 (328)
T d3bqca1         112 EHVNNTDFKQLY-------QTLTDYDIRFYMYEILKALDYCHSM  148 (328)
T ss_dssp             ECCCSCBGGGTT-------TSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eecCCCcHHHHh-------cCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            999999987654       3589999999999999999999974

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7.3e-23  Score=142.01  Aligned_cols=116  Identities=23%  Similarity=0.384  Sum_probs=95.1

Q ss_pred             hcCceeecccccccceEEEEEEec-CCC----EEEEEEccCCC--cCHHHHHHHHHHHhcCCCCcccceeeEEEeCCeEE
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQLH-TGG----LIAVKMLENSN--FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA  101 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~----~~avk~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~  101 (148)
                      ..+|++.+.||+|+||.||+|.+. +|+    .||+|.++...  ...+.+.+|+.++.+++||||+++++++.++ ..+
T Consensus         8 ~~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~   86 (317)
T d1xkka_           8 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ   86 (317)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEE
T ss_pred             HHHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-Cee
Confidence            457999999999999999999853 443    58888886532  2356799999999999999999999998765 567


Q ss_pred             EEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       102 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++|++.+|+|.+++..   ....+++..+..++.||+.||.|||++
T Consensus        87 ~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~qi~~gl~yLH~~  130 (317)
T d1xkka_          87 LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDR  130 (317)
T ss_dssp             EEEECCTTCBHHHHHHH---TSSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeccCCcccccccc---cccCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            88899999999987743   346689999999999999999999974

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=9.1e-24  Score=143.87  Aligned_cols=115  Identities=22%  Similarity=0.257  Sum_probs=97.7

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC-------HHHHHHHHHHHhcCC--CCcccceeeEEEeCCe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS-------AVEFINEVSTIGRIH--HVNVVQLLGFYSEGSK   99 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~-------~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~   99 (148)
                      ++|++.+.||+|+||.||+|+. .++..||+|+++.....       ...+.+|+.++++++  ||||+++++++.+++.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            5799999999999999999996 57899999998653221       123668999999886  8999999999999999


Q ss_pred             EEEEEeccCC-CChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPN-GSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .++|||++.+ +++.+++    .....+++..++.++.|++.||+|||++
T Consensus        84 ~~lv~e~~~~~~~l~~~~----~~~~~l~e~~~~~~~~qi~~al~~lH~~  129 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCHNC  129 (273)
T ss_dssp             EEEEEECCSSEEEHHHHH----HHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEeccCcchHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999976 5777777    3345689999999999999999999974

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.2e-23  Score=141.97  Aligned_cols=112  Identities=26%  Similarity=0.328  Sum_probs=91.6

Q ss_pred             cCceeecccccccceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeCC----eEEEEEe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS----KRALVYE  105 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e  105 (148)
                      .+|.+.+.||+|+||.||+|+.+ |..||+|+++...........|+..+.+++||||+++++++...+    ..++|||
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~-g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~E   81 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEe
Confidence            46889999999999999999874 889999998654322222334445556789999999999987643    5889999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |+++|+|.+++..     ..+++.+++.++.|++.||.|||+
T Consensus        82 y~~~g~L~~~l~~-----~~l~~~~~~~~~~~ia~gl~~lH~  118 (303)
T d1vjya_          82 YHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHM  118 (303)
T ss_dssp             CCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHC
T ss_pred             cccCCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999943     348999999999999999999995

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=8.3e-23  Score=143.21  Aligned_cols=115  Identities=19%  Similarity=0.265  Sum_probs=96.7

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEeC-----Ce
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSEG-----SK   99 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~   99 (148)
                      .++|++.+.||+|+||.||+|+. .+|+.||+|+++....+.   ..+.+|+.+|+.++||||+++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            35799999999999999999996 579999999998654443   3578999999999999999999998643     23


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+++++++.+|+|.+++.     .+.+++..+..++.||+.||+|||++
T Consensus        97 ~~~i~~~~~gg~L~~~~~-----~~~l~e~~~~~i~~qil~aL~~LH~~  140 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHSA  140 (348)
T ss_dssp             CCEEEEECCSEEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEEeecCCchhhhcc-----cccccHHHHHHHHHHHHHHHHHHHhC
Confidence            456677788999999882     24599999999999999999999974

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.1e-22  Score=138.47  Aligned_cols=113  Identities=27%  Similarity=0.373  Sum_probs=92.9

Q ss_pred             eeecccccccceEEEEEEecC----CCEEEEEEccCCCc--CHHHHHHHHHHHhcCCCCcccceeeEEEe-CCeEEEEEe
Q 041447           33 DLTWSSGKDGFGSVYKGQLHT----GGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQLLGFYSE-GSKRALVYE  105 (148)
Q Consensus        33 ~~~~~lg~g~~~~v~~~~~~~----~~~~avk~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e  105 (148)
                      .+.++||+|+||+||+|+...    ...||||.++....  ...++.+|+.+|.+++||||+++++++.. ++..++|||
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEE
Confidence            346789999999999998532    22589999875322  23558999999999999999999999775 568999999


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||++|+|.+++..   ....+++..+..++.|++.||.|||+.
T Consensus       110 ~~~~g~l~~~~~~---~~~~~~~~~~~~i~~qia~gL~~lH~~  149 (311)
T d1r0pa_         110 YMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASK  149 (311)
T ss_dssp             CCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeecCchhhhhcc---ccccchHHHHHHHHHHHHHhhhhhccc
Confidence            9999999998742   345578889999999999999999963

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.5e-22  Score=141.20  Aligned_cols=112  Identities=20%  Similarity=0.198  Sum_probs=92.8

Q ss_pred             cCceeecccccccceEEEEEEec-CCCEEEEEEccCCCcCH---HHHHHHHHHHhcCCCCcccceeeEEEe------CCe
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSA---VEFINEVSTIGRIHHVNVVQLLGFYSE------GSK   99 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~   99 (148)
                      ++|++.+.||+|+||+||+|... +|..||+|++.......   ..+.+|+.+++.++||||+++++++..      .+.
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            57999999999999999999964 79999999997654443   347899999999999999999999864      367


Q ss_pred             EEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       100 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +|+|||||.++ +.+.+      ...+++..++.++.|++.||.|||++
T Consensus        97 ~~iv~Ey~~~~-l~~~~------~~~~~~~~i~~~~~qil~gl~~LH~~  138 (355)
T d2b1pa1          97 VYLVMELMDAN-LCQVI------QMELDHERMSYLLYQMLCGIKHLHSA  138 (355)
T ss_dssp             EEEEEECCSEE-HHHHH------TSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEeccchH-HHHhh------hcCCCHHHHHHHHHHHHHHHHHhhhc
Confidence            99999999775 44444      13579999999999999999999974

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.4e-22  Score=142.08  Aligned_cols=114  Identities=20%  Similarity=0.313  Sum_probs=91.0

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC---HHHHHHHHHHHhcCCCCcccceeeEEEeCC------
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS---AVEFINEVSTIGRIHHVNVVQLLGFYSEGS------   98 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------   98 (148)
                      .++|++++.||+|+||.||+|.. .+|+.||+|+++.....   .+.+.+|+.+|+.++||||+++++++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            56899999999999999999996 47999999999764443   335789999999999999999999997654      


Q ss_pred             eEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        99 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..++||||+ +.+|..+..     ...+++..++.++.|++.||.|||++
T Consensus        97 ~~~lv~e~~-~~~l~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~  140 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMK-----HEKLGEDRIQFLVYQMLKGLRYIHAA  140 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEEecc-cccHHHHHH-----hccccHHHHHHHHHHHHHHHHHHHhC
Confidence            479999999 557777652     24589999999999999999999974

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=4.1e-23  Score=143.56  Aligned_cols=117  Identities=21%  Similarity=0.267  Sum_probs=101.1

Q ss_pred             hhcCceeecccccccceEEEEEEe----cCCCEEEEEEccCCC-----cCHHHHHHHHHHHhcCCC-CcccceeeEEEeC
Q 041447           28 LDSGLDLTWSSGKDGFGSVYKGQL----HTGGLIAVKMLENSN-----FSAVEFINEVSTIGRIHH-VNVVQLLGFYSEG   97 (148)
Q Consensus        28 ~~~~~~~~~~lg~g~~~~v~~~~~----~~~~~~avk~~~~~~-----~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~   97 (148)
                      ..++|++.+.||+|+||.||+|..    .+|..+|+|+++...     ...+.+.+|+.++.+++| |||+++++++.+.
T Consensus        22 ~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~  101 (322)
T d1vzoa_          22 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE  101 (322)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred             chhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccC
Confidence            346899999999999999999984    257899999986532     234557899999999976 8999999999999


Q ss_pred             CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ...+++|||+.+|+|.+++    .....+++..+..++.|++.||.|||++
T Consensus       102 ~~~~~v~e~~~~~~L~~~i----~~~~~~~e~~~~~~~~Qi~~al~~lH~~  148 (322)
T d1vzoa_         102 TKLHLILDYINGGELFTHL----SQRERFTEHEVQIYVGEIVLALEHLHKL  148 (322)
T ss_dssp             TEEEEEECCCCSCBHHHHH----HHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CceeeeeecccccHHHHHH----HhcccccHHHHHHHHHHHHHHHHHhhcC
Confidence            9999999999999999988    3445678999999999999999999974

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=4.7e-22  Score=137.82  Aligned_cols=115  Identities=21%  Similarity=0.301  Sum_probs=94.5

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCc---CHHHHHHHHHHHhcCCCCcccceeeEEEe--------C
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQLLGFYSE--------G   97 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------~   97 (148)
                      ++|++.+.||+|+||+||+|+. .+|+.||||++.....   ....+.+|+.+|+.++||||+++++.+..        .
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            5799999999999999999996 5799999999865433   24558899999999999999999998754        3


Q ss_pred             CeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        98 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +..+++||++.++++....    .....+++..++.++.|++.||.|||++
T Consensus        90 ~~~~iv~e~~~~~~~~~~~----~~~~~~~~~~~~~i~~qil~~l~~lH~~  136 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLS----NVLVKFTLSEIKRVMQMLLNGLYYIHRN  136 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHT----CTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEEeccCCCccchhh----hcccccccHHHHHHHHHHHHHHHHhccC
Confidence            4689999999887666554    4456789999999999999999999974

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.6e-22  Score=140.92  Aligned_cols=114  Identities=21%  Similarity=0.301  Sum_probs=92.1

Q ss_pred             CceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcccceeeEEEeC------CeEEEE
Q 041447           31 GLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG------SKRALV  103 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~~~lv  103 (148)
                      +|+..++||+|+||+||+|+. .+++.||+|++......   ..+|+.+|++++||||+++++++...      .++++|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~---~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv   97 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF---KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV   97 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS---CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH---HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEE
Confidence            688999999999999999996 47999999999764332   34799999999999999999998543      347899


Q ss_pred             EeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          104 YEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       104 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ||||+++.+. .+.........+++..+..++.|++.||+|||++
T Consensus        98 ~Ey~~~~~~~-~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~  141 (350)
T d1q5ka_          98 LDYVPETVYR-VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF  141 (350)
T ss_dssp             EECCSEEHHH-HHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EeccCCccHH-HHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            9999875433 3322113456799999999999999999999975

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.3e-22  Score=138.36  Aligned_cols=126  Identities=25%  Similarity=0.386  Sum_probs=97.5

Q ss_pred             HHHHhhhcCceeecccccccceEEEEEEec------CCCEEEEEEccCCCcC--HHHHHHHHHHHhcC-CCCcccceeeE
Q 041447           23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQLH------TGGLIAVKMLENSNFS--AVEFINEVSTIGRI-HHVNVVQLLGF   93 (148)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~~~~~   93 (148)
                      .-|+++.++|++.+.||+|+||.||+|...      +++.||+|.++.....  .+.+.+|...+.++ +||||+.+++.
T Consensus         6 ~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~   85 (299)
T d1ywna1           6 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA   85 (299)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeee
Confidence            345677889999999999999999999842      3468999998754332  33477777777776 68999999998


Q ss_pred             EEe-CCeEEEEEeccCCCChhhcccccCC------------CCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           94 YSE-GSKRALVYEYMPNGSLDRHIFPNEG------------RGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        94 ~~~-~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +.. .+..+++||||++|+|.+++.....            ....+++..+..++.||+.||.|||++
T Consensus        86 ~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~  153 (299)
T d1ywna1          86 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR  153 (299)
T ss_dssp             ECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            765 4568999999999999999854321            134589999999999999999999974

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.8e-22  Score=140.50  Aligned_cols=114  Identities=14%  Similarity=0.205  Sum_probs=91.5

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcC--HHHHHHHHHHHhcCCCCcccceeeEEEeCC----eEEE
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFS--AVEFINEVSTIGRIHHVNVVQLLGFYSEGS----KRAL  102 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~l  102 (148)
                      ++|.+++.||+|+||.||+|.. .+|..+|||+++.....  .+.+.+|+.+|.+++||||+++++++....    ..++
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            4799999999999999999985 58999999999764432  345789999999999999999999986543    2334


Q ss_pred             EEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          103 VYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       103 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      +++++.+|+|.+++..     ..+++..+..++.|++.||+|||++
T Consensus        88 l~~~~~~g~L~~~l~~-----~~l~~~~i~~i~~qil~al~yLH~~  128 (345)
T d1pmea_          88 LVTHLMGADLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA  128 (345)
T ss_dssp             EEEECCCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeecCCchhhhhhc-----CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4556678899999832     3589999999999999999999974

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.5e-21  Score=133.44  Aligned_cols=117  Identities=21%  Similarity=0.335  Sum_probs=91.3

Q ss_pred             hcCceeecccccccceEEEEEEe-cC-CCEEEEEEccCCCc---CHHHHHHHHHHHhcC---CCCcccceeeEEEe----
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HT-GGLIAVKMLENSNF---SAVEFINEVSTIGRI---HHVNVVQLLGFYSE----   96 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~-~~~~avk~~~~~~~---~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~----   96 (148)
                      .++|++++.||+|+||.||+|+. .+ ++.||+|+++....   ....+.+|+.+++.+   +||||+++++++..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            36899999999999999999996 34 56789999865322   233466777766654   79999999999853    


Q ss_pred             -CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           97 -GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        97 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                       ....++++|++.++++.....   .....+++..++.++.|++.||+|||++
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~---~~~~~~~~~~~~~~~~qi~~aL~yLH~~  135 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDK---VPEPGVPTETIKDMMFQLLRGLDFLHSH  135 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHH---SCTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCceEEEEEEeccCCchhhhhh---ccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence             346889999999876654331   3445689999999999999999999974

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.83  E-value=1.5e-20  Score=128.93  Aligned_cols=115  Identities=18%  Similarity=0.264  Sum_probs=97.6

Q ss_pred             hcCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCC-CcccceeeEEEeCCeEEEEEec
Q 041447           29 DSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHH-VNVVQLLGFYSEGSKRALVYEY  106 (148)
Q Consensus        29 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e~  106 (148)
                      ..+|++++.||+|+||.||+|+. .+++.+|+|+++... ....+.+|++.+..++| +|++.+++++......++|||+
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            46899999999999999999996 478899999886532 33456788888888864 8999999999999999999999


Q ss_pred             cCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          107 MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       107 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      + +++|.+++..   ....++...+..++.|++.||+|||++
T Consensus        83 ~-~~~l~~~~~~---~~~~~~~~~~~~i~~q~~~~l~~lH~~  120 (293)
T d1csna_          83 L-GPSLEDLLDL---CGRKFSVKTVAMAAKQMLARVQSIHEK  120 (293)
T ss_dssp             C-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             c-CCCHHHHHHh---hccchhhHHHHHHHHHHHHHHHHHHHC
Confidence            9 5799888743   335689999999999999999999974

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.82  E-value=4.5e-20  Score=126.77  Aligned_cols=114  Identities=20%  Similarity=0.220  Sum_probs=92.4

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCc-ccceeeEEEeCCeEEEEEecc
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVN-VVQLLGFYSEGSKRALVYEYM  107 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~e~~  107 (148)
                      ++|++.+.||+|+||.||+|+. .++..||+|++.... ....+.+|+++++.++|++ |+.+.+++...+..++||||+
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~   85 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   85 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence            4799999999999999999996 478899999887643 3345788999999998665 555566667788899999999


Q ss_pred             CCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447          108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus       108 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      .+ ++.+.+.   .....+++..+..++.|++.||+|||++
T Consensus        86 ~~-~l~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~  122 (299)
T d1ckia_          86 GP-SLEDLFN---FCSRKFSLKTVLLLADQMISRIEYIHSK  122 (299)
T ss_dssp             CC-BHHHHHH---HTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CC-chhhhhh---hccCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence            55 6665552   2345689999999999999999999974

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.68  E-value=6.9e-17  Score=113.20  Aligned_cols=117  Identities=13%  Similarity=0.217  Sum_probs=89.7

Q ss_pred             cCceeecccccccceEEEEEEe-cCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-----------CCcccceeeEEEe-
Q 041447           30 SGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKMLENSNFSAVEFINEVSTIGRIH-----------HVNVVQLLGFYSE-   96 (148)
Q Consensus        30 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-----------~~~i~~~~~~~~~-   96 (148)
                      .+|++++.||+|+||+||+|+. .+|..||||+++......+...+|+.+++.+.           |+||+++++++.. 
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            3599999999999999999996 57899999999876555566778888777664           5789999988754 


Q ss_pred             -CCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447           97 -GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus        97 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                       ....+++++++..++...... .......+++..+..++.|++.||+|||+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~i~~qil~al~~lh~  143 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALI-KKYEHRGIPLIYVKQISKQLLLGLDYMHR  143 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHH-HHTTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccceeeeeeeccccccccccc-ccccccCCcHHHHHHHHHHHHHHHHHHhh
Confidence             456667777765543222111 11345668999999999999999999996

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.57  E-value=6.1e-15  Score=94.79  Aligned_cols=102  Identities=17%  Similarity=0.121  Sum_probs=75.6

Q ss_pred             ceeecccccccceEEEEEEecCCCEEEEEEccCCCcC-------------------HHHHHHHHHHHhcCCCCcccceee
Q 041447           32 LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFS-------------------AVEFINEVSTIGRIHHVNVVQLLG   92 (148)
Q Consensus        32 ~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~~~-------------------~~~~~~e~~~l~~l~~~~i~~~~~   92 (148)
                      +.+++.||+|+||.||.|...+|+.+|+|+++.....                   .....+|...+..+.|++++..++
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             chhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            3578999999999999999878999999987542211                   012346778888999999988775


Q ss_pred             EEEeCCeEEEEEeccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041447           93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG  148 (148)
Q Consensus        93 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  148 (148)
                      ..  .  .+++||+++++.+.+.           +...+..++.|++.||.|||++
T Consensus        82 ~~--~--~~lvme~~~~~~~~~l-----------~~~~~~~i~~ql~~~l~~lH~~  122 (191)
T d1zara2          82 WE--G--NAVLMELIDAKELYRV-----------RVENPDEVLDMILEEVAKFYHR  122 (191)
T ss_dssp             EE--T--TEEEEECCCCEEGGGC-----------CCSCHHHHHHHHHHHHHHHHHT
T ss_pred             ec--C--CEEEEEeeccccccch-----------hhHHHHHHHHHHHHHHHHHhhC
Confidence            42  2  3699999988654432           2334567899999999999964

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.80  E-value=9.1e-05  Score=48.26  Aligned_cols=107  Identities=12%  Similarity=0.010  Sum_probs=69.4

Q ss_pred             CceeecccccccceEEEEEEecCCCEEEEEEccCCC-cCHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEEeccC
Q 041447           31 GLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSN-FSAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVYEYMP  108 (148)
Q Consensus        31 ~~~~~~~lg~g~~~~v~~~~~~~~~~~avk~~~~~~-~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~  108 (148)
                      .|......+.++.+.||.... ++..+++|...... .....+.+|...+..+. +--+++++.....++..+++|++++
T Consensus        15 ~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~   93 (263)
T d1j7la_          15 KYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD   93 (263)
T ss_dssp             TSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred             ceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecc
Confidence            556666544455578998764 35667778765422 23334667777766653 4446777777788889999999999


Q ss_pred             CCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       109 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |.++.+...    .     ......+..++...++-||+
T Consensus        94 G~~~~~~~~----~-----~~~~~~~~~~l~~~l~~lH~  123 (263)
T d1j7la_          94 GVLCSEEYE----D-----EQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             SEEHHHHTT----T-----CSCHHHHHHHHHHHHHHHHT
T ss_pred             ccccccccc----c-----cccHHHHHHHHHHHHHHHhc
Confidence            988765441    1     11123356677777788885

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=96.92  E-value=0.0098  Score=37.98  Aligned_cols=95  Identities=16%  Similarity=0.125  Sum_probs=61.2

Q ss_pred             cccc-ceEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCC--CCcccceeeEEEeCCeEEEEEeccCCCChhhc
Q 041447           39 GKDG-FGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIH--HVNVVQLLGFYSEGSKRALVYEYMPNGSLDRH  115 (148)
Q Consensus        39 g~g~-~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~  115 (148)
                      ..|. .+.||.....++..+++|......  ...+.+|...+..+.  ...+++++....+++..+++|++++|.++.+.
T Consensus        19 ~~G~s~~~v~r~~~~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~~   96 (255)
T d1nd4a_          19 TIGCSDAAVFRLSAQGRPVLFVKTDLSGA--LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLSS   96 (255)
T ss_dssp             SCTTSSCEEEEEECTTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETTTS
T ss_pred             CCcccCCeEEEEEeCCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccccc
Confidence            3444 367898877667778888765432  234566777666553  33467778777788889999999998766442


Q ss_pred             ccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          116 IFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       116 l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      .         .+..   ....++...|+-||.
T Consensus        97 ~---------~~~~---~~~~~l~~~la~LH~  116 (255)
T d1nd4a_          97 H---------LAPA---EKVSIMADAMRRLHT  116 (255)
T ss_dssp             C---------CCHH---HHHHHHHHHHHHHTT
T ss_pred             c---------ccHH---HHHHHHHHHHHHHcc
Confidence            2         2222   234566677777774

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=95.91  E-value=0.024  Score=38.95  Aligned_cols=76  Identities=14%  Similarity=0.051  Sum_probs=47.4

Q ss_pred             ecccccccceEEEEEEe-cCCCEEEEEEccC----C----CcCHHHHHHHHHHHhcCC-C--CcccceeeEEEeCCeEEE
Q 041447           35 TWSSGKDGFGSVYKGQL-HTGGLIAVKMLEN----S----NFSAVEFINEVSTIGRIH-H--VNVVQLLGFYSEGSKRAL  102 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~-~~~~~~avk~~~~----~----~~~~~~~~~e~~~l~~l~-~--~~i~~~~~~~~~~~~~~l  102 (148)
                      .+.+|.|....||+... .+++.+++|.-.+    .    .....+...|...|..+. +  ..+++++.  .++...++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFY--SDTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEE--EETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEE--EcCCCCEE
Confidence            45679999999999985 3467888886432    1    112334556777776552 2  34555554  34556779


Q ss_pred             EEeccCCCCh
Q 041447          103 VYEYMPNGSL  112 (148)
Q Consensus       103 v~e~~~~g~L  112 (148)
                      +||++.+..+
T Consensus       109 vmE~L~~~~~  118 (392)
T d2pula1         109 VMEDLSHLKI  118 (392)
T ss_dssp             EECCCTTSEE
T ss_pred             EEeccCCccc
Confidence            9999977544

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=92.08  E-value=0.39  Score=31.64  Aligned_cols=68  Identities=13%  Similarity=0.102  Sum_probs=45.5

Q ss_pred             eEEEEEEecCCCEEEEEEccCCCcCHHHHHHHHHHHhcCCCCcc--ccee-----eEEEeCCeEEEEEeccCCCC
Q 041447           44 GSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNV--VQLL-----GFYSEGSKRALVYEYMPNGS  111 (148)
Q Consensus        44 ~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~~~~i--~~~~-----~~~~~~~~~~lv~e~~~~g~  111 (148)
                      ..||+....+|..+++|+.++...+..++..|...+..+....+  +...     ..+...+..+.+++++.|..
T Consensus        36 N~vy~v~~~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~  110 (325)
T d1zyla1          36 NRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ  110 (325)
T ss_dssp             SEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred             ceeEEEEcCCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence            57999988788889999988766666777778777766532111  1111     12344666788889887743

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=90.80  E-value=0.66  Score=31.40  Aligned_cols=96  Identities=14%  Similarity=0.147  Sum_probs=57.8

Q ss_pred             ecccccccceEEEEEEec--------CCCEEEEEEccCCCcCHHHHHHHHHHHhcCC-CCcccceeeEEEeCCeEEEEEe
Q 041447           35 TWSSGKDGFGSVYKGQLH--------TGGLIAVKMLENSNFSAVEFINEVSTIGRIH-HVNVVQLLGFYSEGSKRALVYE  105 (148)
Q Consensus        35 ~~~lg~g~~~~v~~~~~~--------~~~~~avk~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e  105 (148)
                      ++.|+.|-.-.+|+....        ....+++++... ........+|..+++.+. +.-.+++++.+.  +  .+|+|
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~--~--g~I~e  121 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-PETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE  121 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-CCCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-cchhhHHHHHHHHHHHHHhCCCCCeEEEEcC--C--ceEEE
Confidence            356777878889998743        234577776642 333445667888877774 444456666553  2  57899


Q ss_pred             ccCCCChhhcccccCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 041447          106 YMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN  147 (148)
Q Consensus       106 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  147 (148)
                      |++|.++...-        ...    -.+..+++..|+-+|.
T Consensus       122 fi~g~~l~~~d--------~~~----~~~~~~iA~~La~lH~  151 (395)
T d1nw1a_         122 YIPSRPLSCHE--------ISL----AHMSTKIAKRVAKVHQ  151 (395)
T ss_dssp             CCCEEECCTTG--------GGS----HHHHHHHHHHHHHHTT
T ss_pred             EeccccCChhh--------ccc----hhhhHHHHHHHHHHhh
Confidence            99875543211        011    2355667777777774