Citrus Sinensis ID: 041450
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 949 | 2.2.26 [Sep-21-2011] | |||||||
| Q9M2A0 | 948 | ATPase 8, plasma membrane | yes | no | 0.995 | 0.996 | 0.847 | 0.0 | |
| Q9SH76 | 949 | ATPase 6, plasma membrane | no | no | 0.997 | 0.997 | 0.828 | 0.0 | |
| Q03194 | 952 | Plasma membrane ATPase 4 | N/A | no | 0.996 | 0.993 | 0.833 | 0.0 | |
| Q42556 | 954 | ATPase 9, plasma membrane | no | no | 0.997 | 0.992 | 0.819 | 0.0 | |
| Q7XPY2 | 951 | Plasma membrane ATPase OS | yes | no | 0.994 | 0.992 | 0.817 | 0.0 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.994 | 0.992 | 0.823 | 0.0 | |
| P19456 | 948 | ATPase 2, plasma membrane | no | no | 0.993 | 0.994 | 0.828 | 0.0 | |
| P20431 | 949 | ATPase 3, plasma membrane | no | no | 0.993 | 0.993 | 0.820 | 0.0 | |
| Q9SJB3 | 949 | ATPase 5, plasma membrane | no | no | 0.994 | 0.994 | 0.793 | 0.0 | |
| P20649 | 949 | ATPase 1, plasma membrane | no | no | 0.994 | 0.994 | 0.815 | 0.0 |
| >sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1635 bits (4235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 803/947 (84%), Positives = 873/947 (92%), Gaps = 2/947 (0%)
Query: 3 DISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLK 62
+ S +EIK ENVDLERIPV EVFEQLKC+ +GL++ EG KRL+IFG NKLEEK E+K LK
Sbjct: 4 EFSWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLK 63
Query: 63 FLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNA 122
FLGFMWNPLSWVME+AAIMAIVLANGGGK PDW DF+GI+VLL INSTISFIEENNAGNA
Sbjct: 64 FLGFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNA 123
Query: 123 AAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAA 182
AAALMA LAPKTKVLRD KW EQEA ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQ+A
Sbjct: 124 AAALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSA 183
Query: 183 LTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 242
LTGESLP TK+PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVL
Sbjct: 184 LTGESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVL 243
Query: 243 TAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 302
T+IGNFCICSI +GM IEI++M+ IQ R+YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 244 TSIGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 303
Query: 303 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLL 362
SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVF K DSD ++L
Sbjct: 304 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVL 363
Query: 363 AAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHR 422
AARASR+ENQDAIDASIVGML DPKEARAGITEVHFLPFNPVDKRTAITYID +GDWHR
Sbjct: 364 MAARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHR 423
Query: 423 TSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFV 482
+SKGAPEQII+LC L+GE +RKAH++ID FAERGLR+LGV +QTVPEKTKES+GSPWEFV
Sbjct: 424 SSKGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFV 483
Query: 483 GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ 542
GLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIG ETGRRLGMGTNMYPS+SLLG
Sbjct: 484 GLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGN 543
Query: 543 SKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRAD 602
SKDES+ +P++ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK+AD
Sbjct: 544 SKDESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 603
Query: 603 IGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 662
IGIAVADATDAARSASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGF
Sbjct: 604 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 663
Query: 663 LLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYM 722
+LVAL+W+FDF PFM+LIIAILNDGTIMTISKDRVKPSP+PDSWKL EIF TGVVLGTYM
Sbjct: 664 MLVALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYM 723
Query: 723 ALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFV 782
AL T FFWL HDT FF+ TF ++ I + L AALYLQVSIISQALIFVTRSRSWSFV
Sbjct: 724 ALTTVLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFV 783
Query: 783 ERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFV 842
ERPG +L+ AF++AQL+AT+IAVYA W FARI G GWGWAG IW++SIITY+PLD LKF+
Sbjct: 784 ERPGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFI 843
Query: 843 IRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSESTVNEKNSNRE 902
IRYA +GKAWDN++ KTAFTTKKDYGKGEREAQWA+AQRT+HGL E+ N+ N N E
Sbjct: 844 IRYALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEAMFND-NKN-E 901
Query: 903 LNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
L+E+AEQAKRRAEVARLRELHTLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 902 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|Q9SH76|PMA6_ARATH ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1600 bits (4144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 785/948 (82%), Positives = 861/948 (90%), Gaps = 1/948 (0%)
Query: 2 GDISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLL 61
DIS +EIK ENVDLE+IPV EVF+QLKC+ +GL++ EG RLQIFG NKLEEK E+K L
Sbjct: 3 ADISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFL 62
Query: 62 KFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGN 121
KFLGFMWNPLSWVMEAAAIMAIVLANGGG+PPDW DFVGI LL INSTISFIEENNAGN
Sbjct: 63 KFLGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGN 122
Query: 122 AAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQA 181
AAAALMA LAPKTKVLRD +W EQEA ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQ+
Sbjct: 123 AAAALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQS 182
Query: 182 ALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKV 241
ALTGESLP TK+ GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKV
Sbjct: 183 ALTGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKV 242
Query: 242 LTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 301
LTAIGNFCICSI +GM IEII+M+ IQ R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAI
Sbjct: 243 LTAIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 302
Query: 302 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLL 361
GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+LIEVF K D D ++
Sbjct: 303 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVI 362
Query: 362 LAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWH 421
L +ARASRVENQDAID SIV ML DPKEARAGITEVHFLPFNPV+KRTAITYID+NG+WH
Sbjct: 363 LLSARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWH 422
Query: 422 RTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEF 481
R SKGAPEQII+LC LKGE +R+AH+IID FAERGLR+LGV RQ VPEK KES G+PWEF
Sbjct: 423 RCSKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEF 482
Query: 482 VGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 541
VGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL
Sbjct: 483 VGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL- 541
Query: 542 QSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRA 601
++KD++ +PV+ELIEKADGFAGVFPEHKYEIV+KLQERKHI GMTGDGVNDAPALK+A
Sbjct: 542 ENKDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKA 601
Query: 602 DIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLG 661
DIGIAV DATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLG
Sbjct: 602 DIGIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLG 661
Query: 662 FLLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTY 721
F+LVAL+W+FDF PFM+LIIAILNDGTIMTISKDRVKPSP+PDSWKLKEIF TGVVLGTY
Sbjct: 662 FMLVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTY 721
Query: 722 MALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSF 781
MALVT FFWL HDT FF++ F ++ + K + L A LYLQVSIISQALIFVTRSRSWSF
Sbjct: 722 MALVTVVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTRSRSWSF 781
Query: 782 VERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKF 841
VERPG++L+ AF VAQL+AT+IA YA WEFARI+G GWGW G IWI+SI+TY+PLD LKF
Sbjct: 782 VERPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKF 841
Query: 842 VIRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSESTVNEKNSNR 901
+ RY SGKAW+N+++N+TAFTTKKDYG+GEREAQWA+AQRT+HGL+ ES + +
Sbjct: 842 ITRYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPESMFEDTATYT 901
Query: 902 ELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
EL+E+AEQAK+RAEVARLRE+HTLKGHVESVVKLKGLDI+ + QHYTV
Sbjct: 902 ELSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1598 bits (4138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 790/948 (83%), Positives = 864/948 (91%), Gaps = 2/948 (0%)
Query: 4 ISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLKF 63
ISLEEIKNE VDLE+IP+ EVFEQLKCT +GL+ EG RLQIFG NKLEEK ESK+LKF
Sbjct: 5 ISLEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKILKF 64
Query: 64 LGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAA 123
LGFMWNPLSWVMEAAA+MAI LANG GKPPDW DF+GI+ LL INSTISFIEENNAGNAA
Sbjct: 65 LGFMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIEENNAGNAA 124
Query: 124 AALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAAL 183
AALMAGLAPKTKVLRD +WSEQEA ILVPGDIIS+KLGDI+PADARLLEGDPLKIDQ+AL
Sbjct: 125 AALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSAL 184
Query: 184 TGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 243
TGESLPVTKNPGDEVFSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT
Sbjct: 185 TGESLPVTKNPGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLT 244
Query: 244 AIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 303
AIGNFCICSIA+GM +EIIVM+ IQ R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIAIGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 304 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLA 363
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVD++L+EVF KG D + +LL
Sbjct: 305 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEYVLLL 364
Query: 364 AARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRT 423
AARASRVENQDAIDA +VGMLADPKEARAGI EVHFLPFNPVDKRTA+TYID+N +WHR
Sbjct: 365 AARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNNNNWHRA 424
Query: 424 SKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVG 483
SKGAPEQI+DLC K ++RRK H ++D +AERGLR+L V R+TVPEK+KES G WEFVG
Sbjct: 425 SKGAPEQILDLCNAKEDVRRKVHSMMDKYAERGLRSLAVARRTVPEKSKESPGGRWEFVG 484
Query: 484 LLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQS 543
LLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPS+SLLGQ
Sbjct: 485 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQD 544
Query: 544 KDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADI 603
KD +IAS+P+EELIEKADGFAGVFPEHKYEIVKKLQERKHI GMTGDGVNDAPALK+ADI
Sbjct: 545 KDSAIASLPIEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADI 604
Query: 604 GIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFL 663
GIAVADATDAAR ASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+
Sbjct: 605 GIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFM 664
Query: 664 LVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMA 723
+AL+WK+DF FM+LIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIF TGVVLG Y A
Sbjct: 665 FIALIWKYDFSAFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVVLGGYQA 724
Query: 724 LVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVE 783
L+T FFW +HDT FF++ F +K + + + +ALYLQVSIISQALIFVTRSRSWSF+E
Sbjct: 725 LMTVVFFWAMHDTDFFSDKFGVKSLRNSDEEMMSALYLQVSIISQALIFVTRSRSWSFLE 784
Query: 784 RPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVI 843
RPG++LV AF++AQL+AT+IAVYA W FAR++G GWGWAG IW++SII YLPLD +KF I
Sbjct: 785 RPGMLLVIAFMIAQLVATLIAVYANWAFARVKGCGWGWAGVIWLYSIIFYLPLDIMKFAI 844
Query: 844 RYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSEST--VNEKNSNR 901
RY SGKAW+NLL NKTAFTTKKDYGK EREAQWA+AQRT+HGLQ E+T NEKNS R
Sbjct: 845 RYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATNLFNEKNSYR 904
Query: 902 ELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
EL+E+AEQAKRRAE+ARLRELHTLKGHVESVVKLKGLDIETIQQHYTV
Sbjct: 905 ELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q42556|PMA9_ARATH ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1582 bits (4095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 778/949 (81%), Positives = 865/949 (91%), Gaps = 2/949 (0%)
Query: 3 DISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLK 62
D S ++IKNE +DLE+IP+ EV QL+CT +GLT+ EG+ RL+IFG NKLEEKKE+K+LK
Sbjct: 6 DSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKENKVLK 65
Query: 63 FLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNA 122
FLGFMWNPLSWVME AAIMAI LANGGG+PPDW DFVGI VLL INSTISFIEENNAGNA
Sbjct: 66 FLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEENNAGNA 125
Query: 123 AAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAA 182
AAALMAGLAPKTKVLRD KWSEQEA ILVPGDIISIKLGDIVPAD RLL+GDPLKIDQ+A
Sbjct: 126 AAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLKIDQSA 185
Query: 183 LTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 242
LTGESLPVTK+PG EV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVL
Sbjct: 186 LTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVL 245
Query: 243 TAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 302
TAIGNFCICSIA+GM IEI+VM+ IQ+R+YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 246 TAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305
Query: 303 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLL 362
SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKS++EVFVK D D LL+
Sbjct: 306 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDKDQLLV 365
Query: 363 AAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHR 422
AARASRVENQDAIDA IVGML DP+EAR GITEVHF PFNPVDKRTAITYID+NG+WHR
Sbjct: 366 NAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDANGNWHR 425
Query: 423 TSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFV 482
SKGAPEQII+LC L+ + ++AH IID FA+RGLR+L VGRQTV EK K S G PW+F+
Sbjct: 426 VSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPWQFL 485
Query: 483 GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ 542
GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ
Sbjct: 486 GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ 545
Query: 543 SKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRAD 602
KDESIAS+PV+ELIEKADGFAGVFPEHKYEIVK+LQE KHICGMTGDGVNDAPALKRAD
Sbjct: 546 DKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALKRAD 605
Query: 603 IGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 662
IGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIV+GF
Sbjct: 606 IGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVMGF 665
Query: 663 LLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYM 722
+L+AL+WKFDF PFM+LI+AILNDGTIMTISKDRVKPSP+PDSWKLKEIF TGVVLGTY+
Sbjct: 666 MLLALIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGTYL 725
Query: 723 ALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFV 782
A++T FFW T FF+ F ++ I P L+AA+YLQVSI+SQALIFVTRSRSWS+V
Sbjct: 726 AVMTVVFFWAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFVTRSRSWSYV 785
Query: 783 ERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFV 842
ERPG L+ AF +AQL+AT+IAVYA W FARI GIGWGWAG IW++SI+ Y+PLD LKF+
Sbjct: 786 ERPGFWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPLDILKFI 845
Query: 843 IRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSEST--VNEKNSN 900
IRY+ SG+AWDN+++NKTAFT+KKDYGKGEREAQWA AQRT+HGLQ ++++ N+K++
Sbjct: 846 IRYSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMFNDKSTY 905
Query: 901 RELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
REL+E+A+QAKRRAEVARLRE HTLKGHVESVVK KGLDIE IQQHYT+
Sbjct: 906 RELSEIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1573 bits (4074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 775/948 (81%), Positives = 862/948 (90%), Gaps = 4/948 (0%)
Query: 6 LEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLKFLG 65
LEEIKNE VDLE IP+ EVFEQLKCT +GL++ EG +R+++FG NKLEEKKESK+LKFLG
Sbjct: 4 LEEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKESKILKFLG 63
Query: 66 FMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAA 125
FMWNPLSWVME AAIMAI LANGGGKPPDW DFVGI+VLL INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEENNAGNAAAA 123
Query: 126 LMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTG 185
LMA LAPKTKVLRD +W EQEA ILVPGDIISIKLGDIVPADARLLEGDPLKIDQ+ALTG
Sbjct: 124 LMANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTG 183
Query: 186 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 245
ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ VLTAI
Sbjct: 184 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQTVLTAI 243
Query: 246 GNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 305
GNFCICSIAVG+ IEIIVM+ IQ R+YR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 244 GNFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSVTMAIGSHK 303
Query: 306 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAA 365
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK+L+EVF KG D D +LL AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDKDHVLLLAA 363
Query: 366 RASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSK 425
RASR ENQDAIDA++VGMLADPKEARAGI EVHFLPFNPVDKRTA+TYID++G+WHR SK
Sbjct: 364 RASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHRASK 423
Query: 426 GAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLL 485
GAPEQI+ LC K +++RK H +ID +AERGLR+L V RQ VPEK+KES G PW+FVGLL
Sbjct: 424 GAPEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGGPWQFVGLL 483
Query: 486 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKD 545
PLFDPPRHDSAETIR+AL LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ+KD
Sbjct: 484 PLFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKD 543
Query: 546 ESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGI 605
S+ ++PV+ELIEKADGFAGVFPEHKYEIVK+LQE+KHI GMTGDGVNDAPALK+ADIGI
Sbjct: 544 ASLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGI 603
Query: 606 AVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLV 665
AVADATDAARSASDIVLTEPGLSVI+SAVLTSR IFQRMKNYTIYAVSITIRIVLGFLL+
Sbjct: 604 AVADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFLLI 663
Query: 666 ALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALV 725
AL+WK+DF PFM+LIIAILNDGTIMTISKDRVKPSP+PDSWKLKEIF TG+VLG+Y+AL+
Sbjct: 664 ALIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGSYLALM 723
Query: 726 TAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVERP 785
T FFW +H T FFT+ F ++ I + +ALYLQVSI+SQALIFVTRSRSWSF+ERP
Sbjct: 724 TVIFFWAMHKTDFFTDKFGVRSIRNSEHEMMSALYLQVSIVSQALIFVTRSRSWSFIERP 783
Query: 786 GVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIRY 845
G++LV AF++AQL+AT +AVYA W FARI+GIGWGWAG IW++SI+ Y PLD KF IR+
Sbjct: 784 GLLLVTAFMLAQLVATFLAVYANWGFARIKGIGWGWAGVIWLYSIVFYFPLDIFKFFIRF 843
Query: 846 AQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQ----TSESTVNEKNSNR 901
SG+AWDNLL+NK AFTTKKDYG+ EREAQWA AQRT+HGLQ S + N+K+S R
Sbjct: 844 VLSGRAWDNLLENKIAFTTKKDYGREEREAQWATAQRTLHGLQPPEVASNTLFNDKSSYR 903
Query: 902 ELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
EL+E+AEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDI+TIQQ+YTV
Sbjct: 904 ELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQNYTV 951
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1572 bits (4070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 781/948 (82%), Positives = 859/948 (90%), Gaps = 4/948 (0%)
Query: 6 LEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLKFLG 65
LEEI+NE VDLE IP+ EVFEQLKCT +GLT+ EG +R++IFG NKLEEKKESK+LKFLG
Sbjct: 4 LEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKFLG 63
Query: 66 FMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAA 125
FMWNPLSWVME AAIMAI LANGGGKPPDW DFVGI+VLL INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 123
Query: 126 LMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTG 185
LMA LAPKTKVLRD +W EQEA ILVPGDI+SIKLGDIVPADARLLEGDPLKIDQ+ LTG
Sbjct: 124 LMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLKIDQSGLTG 183
Query: 186 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 245
ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ+VLTAI
Sbjct: 184 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQQVLTAI 243
Query: 246 GNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 305
GNFCI SIAVG+ IEIIVM+ IQRR YR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 244 GNFCIVSIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSVTMAIGSHK 303
Query: 306 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAA 365
LSQQGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKLSVDK+L+EVF KG D + +LL AA
Sbjct: 304 LSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLLLAA 363
Query: 366 RASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSK 425
RASRVENQDAIDA +VGMLADPKEARAGI EVHFLPFNP DKRTA+TYID+ G+WHR SK
Sbjct: 364 RASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRASK 423
Query: 426 GAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLL 485
GAPEQII LC K +++RK H +I+ +AERGLR+L V RQ VPEK+K+S G PW+F+GLL
Sbjct: 424 GAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGGPWQFIGLL 483
Query: 486 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKD 545
PLFDPPRHDSAETIR+AL LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQSKD
Sbjct: 484 PLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQSKD 543
Query: 546 ESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGI 605
S+ S+PV+ELIEKADGFAGVFPEHKYEIVK+LQE+KHI GMTGDGVNDAPALK+ADIGI
Sbjct: 544 GSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGI 603
Query: 606 AVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLV 665
AV DATDAARSASDIVLTEPGLSVI+SAVLTSR IFQRMKNYTIYAVSITIRIVLGF+L+
Sbjct: 604 AVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFMLI 663
Query: 666 ALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALV 725
AL+WKFDF PFM+LIIAILNDGTIMTISKDRVKPSP+PDSWKL EIF TGVVLGTY+ALV
Sbjct: 664 ALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLGTYLALV 723
Query: 726 TAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVERP 785
T FFWLIH T FFTN F ++ I +ALYLQVSI+SQALIFVTRSRSWSFVERP
Sbjct: 724 TVVFFWLIHKTDFFTNKFGVESIRNTEFKEMSALYLQVSIVSQALIFVTRSRSWSFVERP 783
Query: 786 GVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIRY 845
G +LV AFL+AQL+AT+IAVYA W+FARI+GIGWGWAG IW+FSI+ Y PLD KF IR+
Sbjct: 784 GFLLVTAFLLAQLVATLIAVYANWDFARIKGIGWGWAGVIWLFSIVFYFPLDIFKFFIRF 843
Query: 846 AQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQ----TSESTVNEKNSNR 901
SG+AWDNLLQNKTAFTTK++YGKGEREAQWA AQRT+HGLQ S + N+K+S R
Sbjct: 844 VLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYR 903
Query: 902 ELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
EL+E+AEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDI+TI Q+YTV
Sbjct: 904 ELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 951
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P19456|PMA2_ARATH ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1566 bits (4054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 785/948 (82%), Positives = 854/948 (90%), Gaps = 5/948 (0%)
Query: 5 SLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLKFL 64
SLE+IKNE VDLE+IP+ EVF+QLKC+ +GLTT EGE R+QIFG NKLEEKKESKLLKFL
Sbjct: 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 62
Query: 65 GFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAA 124
GFMWNPLSWVME AAIMAI LANG G+PPDW DFVGI+ LL INSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAA 122
Query: 125 ALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALT 184
ALMAGLAPKTKVLRD KWSEQEA ILVPGDI+SIKLGDI+PADARLLEGDPLK+DQ+ALT
Sbjct: 123 ALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALT 182
Query: 185 GESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 244
GESLPVTK+PG EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA
Sbjct: 183 GESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242
Query: 245 IGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 304
IGNFCICSIA+GM IEIIVM+ IQRR YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 305 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAA 364
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK+L+EVF KG + D +LL A
Sbjct: 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFA 362
Query: 365 ARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTS 424
A ASRVENQDAIDA++VGMLADPKEARAGI EVHFLPFNPVDKRTA+TYID +G+WHR S
Sbjct: 363 AMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVS 422
Query: 425 KGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGL 484
KGAPEQI++L ++ +K IID +AERGLR+L V RQ VPEKTKES G+PWEFVGL
Sbjct: 423 KGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482
Query: 485 LPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSK 544
LPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLG K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHK 542
Query: 545 DESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG 604
D ++AS+PVEELIEKADGFAGVFPEHKYEIVKKLQERKHI GMTGDGVNDAPALK+ADIG
Sbjct: 543 DANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIG 602
Query: 605 IAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 664
IAVADATDAAR ASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+L
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML 662
Query: 665 VALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMAL 724
+AL+W+FDF FM+LIIAILNDGTIMTISKDRVKPSP PDSWKLKEIF TGVVLG Y A+
Sbjct: 663 IALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722
Query: 725 VTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVER 784
+T FFW H T FF++TF ++ I + L A+YLQVSIISQALIFVTRSRSWSFVER
Sbjct: 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVER 782
Query: 785 PGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIR 844
PG +L+ AFL+AQL+AT+IAVYA WEFA+I GIGWGWAG IW++SI+TY PLD KF IR
Sbjct: 783 PGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIR 842
Query: 845 YAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSESTVN---EKNSNR 901
Y SGKAW NL +NKTAFT KKDYGK EREAQWA+AQRT+HGLQ E+ VN EK S R
Sbjct: 843 YILSGKAWLNLFENKTAFTMKKDYGKEEREAQWALAQRTLHGLQPKEA-VNIFPEKGSYR 901
Query: 902 ELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
EL+E+AEQAKRRAE+ARLRELHTLKGHVESVVKLKGLDIET HYTV
Sbjct: 902 ELSEIAEQAKRRAEIARLRELHTLKGHVESVVKLKGLDIET-PSHYTV 948
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20431|PMA3_ARATH ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1564 bits (4050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 776/946 (82%), Positives = 855/946 (90%), Gaps = 3/946 (0%)
Query: 6 LEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLKFLG 65
LE+I NENVDLE+IP+ EVF+QLKC+ +GL+ AEGE RLQIFG NKLEEKKESKLLKFLG
Sbjct: 5 LEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLKFLG 64
Query: 66 FMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAA 125
FMWNPLSWVMEAAAIMAI LANGGGKPPDW DFVGIV LL INSTISF+EENNAGNAAAA
Sbjct: 65 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNAAAA 124
Query: 126 LMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTG 185
LMAGLAPKTKVLRD KWSEQEA ILVPGDI+SIKLGDI+PADARLLEGDPLK+DQ+ALTG
Sbjct: 125 LMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 184
Query: 186 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 245
ESLP TK PG+EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI
Sbjct: 185 ESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 244
Query: 246 GNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 305
GNFCICSIAVG+ IEI+VM+ IQRR YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 245 GNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHK 304
Query: 306 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAA 365
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK+LIEV+ KG + D +LL AA
Sbjct: 305 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLLFAA 364
Query: 366 RASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSK 425
RASRVENQDAIDA++VGMLADPKEARAGI E+HFLPFNPVDKRTA+T+IDSNG+WHR SK
Sbjct: 365 RASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHRVSK 424
Query: 426 GAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLL 485
GAPEQI+DLC + ++R++ H ID +AERGLR+L V RQTVPEKTKES GSPWEFVG+L
Sbjct: 425 GAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFVGVL 484
Query: 486 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKD 545
PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAI KETGRRLGMG+NMYPSSSLLG+ KD
Sbjct: 485 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGKHKD 544
Query: 546 ESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGI 605
E++A +PVE+LIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK+ADIGI
Sbjct: 545 EAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 604
Query: 606 AVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLV 665
AVADATDAAR ASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+L+
Sbjct: 605 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 664
Query: 666 ALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALV 725
AL+WKFDF PFM+LIIAILNDGTIMTISKDRVKPSP PDSWKLKEIF TGVVLG YMA++
Sbjct: 665 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYMAIM 724
Query: 726 TAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVERP 785
T FFW + T FF TF+++++ + +ALYLQVSI+SQALIFVTRSRSWSF ERP
Sbjct: 725 TVVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFVTRSRSWSFTERP 784
Query: 786 GVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIRY 845
G L+ AF VAQL+AT IAVY WEFARI+GIGWGWAG IW++SI+ Y PLD +KF IRY
Sbjct: 785 GYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDIMKFAIRY 844
Query: 846 AQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSES--TVNEKNSNREL 903
+G AW N++ N+TAFTTK++YG EREAQWA AQRT+HGLQ +E+ V E+ REL
Sbjct: 845 ILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETANVVPERGGYREL 904
Query: 904 NELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
+E+A QAKRRAE+ARLRELHTLKGHVESVVKLKGLDIET HYTV
Sbjct: 905 SEIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIET-AGHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 1556 bits (4028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 751/946 (79%), Positives = 849/946 (89%), Gaps = 2/946 (0%)
Query: 6 LEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLKFLG 65
L+ IKNE+VDL RIP+ EVFE+LKCT +GLT E RL +FG NKLEEKKESKLLKFLG
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 66 FMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAA 125
FMWNPLSWVME AA+MAI LANGGG+PPDW DFVGIV LL INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 126 LMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTG 185
LMAGLAPKTKVLRD +WSEQEA ILVPGD+ISIKLGDI+PADARLL+GDPLKIDQ++LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 186 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 245
ES+PVTKNP DEVFSGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ+GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 246 GNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 305
GNFCICSIA+G+ +E++VM+ IQRR YRDGIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 306 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAA 365
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKL+VDK+L+EVF KG + + L AA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 366 RASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSK 425
RASR+ENQDAIDA+IVGMLADPKEARAG+ EVHF PFNPVDKRTA+TY+DS+G+WHR SK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 426 GAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLL 485
GAPEQI++LC K ++RRK H +ID FAERGLR+L V RQ V EK K++ G PW+ VGLL
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 486 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKD 545
PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 546 ESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGI 605
S+ ++PV+ELIEKADGFAGVFPEHKYEIV +LQ+R HICGMTGDGVNDAPALK+ADIGI
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 606 AVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLV 665
AV DATDAAR ASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+ +
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 663
Query: 666 ALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALV 725
AL+W+FDF PFM+LIIAILNDGTIMTISKDR+KPSP PDSWKL++IF TGVVLG Y AL+
Sbjct: 664 ALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALM 723
Query: 726 TAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVERP 785
T FFW++ D+ FF+N F ++ + ++P+ + AALYLQVSIISQALIFVTRSRSWS+ E P
Sbjct: 724 TVVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFVTRSRSWSYAECP 783
Query: 786 GVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIRY 845
G++L+GAF++AQL+AT IAVYA W FARIEG GWGWAG IW++S +TY+PLD LKF IRY
Sbjct: 784 GLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRY 843
Query: 846 AQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSE--STVNEKNSNREL 903
SGKAW NLL+NKTAFTTKKDYGK EREAQWA AQRT+HGLQ +E + NEKNS EL
Sbjct: 844 VLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNSYSEL 903
Query: 904 NELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
+++AEQAKRRAEV RLRE++TLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 904 SQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20649|PMA1_ARATH ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1548 bits (4009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 771/946 (81%), Positives = 848/946 (89%), Gaps = 2/946 (0%)
Query: 6 LEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLKFLG 65
LE+IKNE VDLE+IP+ EVF+QLKCT +GLTT EGE R+ IFG NKLEEKKESK+LKFLG
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 66 FMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAA 125
FMWNPLSWVMEAAA+MAI LANG +PPDW DFVGI+ LL INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 126 LMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTG 185
LMAGLAPKTKVLRD KWSEQEA ILVPGDI+SIKLGDI+PADARLLEGDPLK+DQ+ALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 186 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 245
ESLPVTK+PG EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 246 GNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 305
GNFCICSIA+G+ IEI+VM+ IQ R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 306 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAA 365
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK+L+EVF KG + D +LL AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 366 RASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSK 425
ASRVENQDAIDA++VGMLADPKEARAGI EVHFLPFNPVDKRTA+TYIDS+G+WHR SK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 426 GAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLL 485
GAPEQI+DL + ++R+K ID +AERGLR+L V RQ VPEKTKES G PWEFVGLL
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 486 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKD 545
PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPS++LLG KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 546 ESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGI 605
+IAS+PVEELIEKADGFAGVFPEHKYEIVKKLQERKHI GMTGDGVNDAPALK+ADIGI
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 606 AVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLV 665
AVADATDAAR ASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+L+
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 663
Query: 666 ALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALV 725
AL+W+FDF FM+LIIAILNDGTIMTISKDRVKPSP PDSWKLKEIF TG+VLG Y A++
Sbjct: 664 ALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIM 723
Query: 726 TAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVERP 785
+ FFW H T FF++ F ++ I + D L A+YLQVSIISQALIFVTRSRSWSFVERP
Sbjct: 724 SVIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERP 783
Query: 786 GVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIRY 845
G +L+ AF++AQL+AT+IAVYA W FA+++GIGWGWAG IWI+SI+TY P D LKF IRY
Sbjct: 784 GALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRY 843
Query: 846 AQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSE--STVNEKNSNREL 903
SGKAW +L N+TAFTTKKDYG GEREAQWA AQRT+HGLQ E + EK S REL
Sbjct: 844 ILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVNIFPEKGSYREL 903
Query: 904 NELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
+E+AEQAKRRAE+ARLRELHTLKGHVESV KLKGLDI+T HYTV
Sbjct: 904 SEIAEQAKRRAEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 949 | ||||||
| 224086345 | 944 | autoinhibited H+ ATPase [Populus trichoc | 0.994 | 1.0 | 0.859 | 0.0 | |
| 225462986 | 952 | PREDICTED: ATPase 8, plasma membrane-typ | 0.996 | 0.993 | 0.874 | 0.0 | |
| 147776860 | 967 | hypothetical protein VITISV_027272 [Viti | 0.996 | 0.978 | 0.860 | 0.0 | |
| 75214754 | 948 | putative plasma membrane ATPase [Capsell | 0.995 | 0.996 | 0.848 | 0.0 | |
| 449457931 | 948 | PREDICTED: ATPase 8, plasma membrane-typ | 0.998 | 1.0 | 0.870 | 0.0 | |
| 224142437 | 949 | autoinhibited H+ ATPase [Populus trichoc | 1.0 | 1.0 | 0.866 | 0.0 | |
| 224091663 | 949 | autoinhibited H+ ATPase [Populus trichoc | 1.0 | 1.0 | 0.864 | 0.0 | |
| 402465300 | 951 | plasma membrane H+ ATPase [Lilium longif | 0.995 | 0.993 | 0.851 | 0.0 | |
| 402465302 | 954 | plasma membrane H+-ATPase LilHA2 [Lilium | 0.995 | 0.990 | 0.852 | 0.0 | |
| 297815396 | 948 | hypothetical protein ARALYDRAFT_323063 [ | 0.995 | 0.996 | 0.850 | 0.0 |
| >gi|224086345|ref|XP_002307856.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222853832|gb|EEE91379.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1691 bits (4379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 811/944 (85%), Positives = 879/944 (93%)
Query: 6 LEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLKFLG 65
+E+IKNE++DLE+IP+ EVFE+LKCT +GL T EGE+RL+IFG NKLEEKKESK+LKFLG
Sbjct: 1 MEDIKNESIDLEKIPIEEVFEKLKCTKEGLRTTEGEERLRIFGPNKLEEKKESKILKFLG 60
Query: 66 FMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAA 125
FMWNPLSWVMEAAAIMAIVLANGGGKPPDW DFVGI+VLL INSTISFIEENNAGNAAA+
Sbjct: 61 FMWNPLSWVMEAAAIMAIVLANGGGKPPDWQDFVGIIVLLIINSTISFIEENNAGNAAAS 120
Query: 126 LMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTG 185
LMAGLAPKTKVLRD KWSEQ+A ILVPGDIISIKLGDI+PADARL+ GDPLKIDQ+ALTG
Sbjct: 121 LMAGLAPKTKVLRDGKWSEQDAAILVPGDIISIKLGDIIPADARLMVGDPLKIDQSALTG 180
Query: 186 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 245
ESLPVTK PG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLTAI
Sbjct: 181 ESLPVTKYPGSGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTAI 240
Query: 246 GNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 305
GNFCICSIA+GM IEIIVM+ IQ R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 241 GNFCICSIAIGMLIEIIVMYPIQHRRYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 300
Query: 306 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAA 365
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+LIEVFVK D D L+L AA
Sbjct: 301 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFVKDMDKDTLILHAA 360
Query: 366 RASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSK 425
RASR ENQDAIDASIVGML DP EAR+GI EVHFLPFNPV+KRTAITY D NGDW+R+SK
Sbjct: 361 RASRTENQDAIDASIVGMLGDPSEARSGIIEVHFLPFNPVEKRTAITYFDGNGDWYRSSK 420
Query: 426 GAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLL 485
GAPEQII+LC LKG +R+KAH+II+NFA+RGLR+LGV R +PEK KES G+PWEFVGLL
Sbjct: 421 GAPEQIIELCELKGNIRKKAHEIINNFADRGLRSLGVARHRIPEKNKESAGAPWEFVGLL 480
Query: 486 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKD 545
PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG +KD
Sbjct: 481 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGDNKD 540
Query: 546 ESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGI 605
ESIAS+PV+ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK+ADIGI
Sbjct: 541 ESIASVPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 600
Query: 606 AVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLV 665
AVADATDAARSASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLV
Sbjct: 601 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLV 660
Query: 666 ALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALV 725
AL+WKFDF PFM+LIIAILNDGTIMTISKDRVKPSP+PDSWKLKEIF GVVLGTY+A++
Sbjct: 661 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLKEIFAMGVVLGTYLAII 720
Query: 726 TAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVERP 785
T FFWL H T FF++ F ++ I KPD L+AALYLQVSIISQALIFVTRSRSWSF ERP
Sbjct: 721 TVLFFWLAHGTDFFSDKFGVRSIRGKPDELTAALYLQVSIISQALIFVTRSRSWSFTERP 780
Query: 786 GVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIRY 845
G++LVGAFL AQL+AT+IAVYA W FARI+GIGWGWAG IWIFSIITY+PLD LKF+ RY
Sbjct: 781 GLLLVGAFLAAQLVATVIAVYANWGFARIQGIGWGWAGIIWIFSIITYIPLDILKFITRY 840
Query: 846 AQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSESTVNEKNSNRELNE 905
A +GKAWDNLL+NKTAFTTKKDYGKGEREAQWA AQRT+HGLQ+ E+ N+K S REL+E
Sbjct: 841 ALTGKAWDNLLENKTAFTTKKDYGKGEREAQWATAQRTLHGLQSPETMKNDKASYRELSE 900
Query: 906 LAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
LAEQAKRRAEVARLRE+HTLKGHVESVVK+KGLDIETIQQHYTV
Sbjct: 901 LAEQAKRRAEVARLREIHTLKGHVESVVKMKGLDIETIQQHYTV 944
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225462986|ref|XP_002263241.1| PREDICTED: ATPase 8, plasma membrane-type [Vitis vinifera] gi|296084595|emb|CBI25616.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1690 bits (4376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 829/948 (87%), Positives = 890/948 (93%), Gaps = 2/948 (0%)
Query: 4 ISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLKF 63
+SLEEIKNE+VDLERIP+ EVFEQLKCT GLT+ EGE RLQIFG+NKLEEKKESK+LKF
Sbjct: 5 MSLEEIKNESVDLERIPIEEVFEQLKCTKDGLTSEEGEHRLQIFGHNKLEEKKESKILKF 64
Query: 64 LGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAA 123
LGFMWNPLSWVME AAIMAIVLANGGGKPPDW DFVGI VLL INSTISFIEENNAGNAA
Sbjct: 65 LGFMWNPLSWVMECAAIMAIVLANGGGKPPDWQDFVGITVLLIINSTISFIEENNAGNAA 124
Query: 124 AALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAAL 183
AALMAGLAPKTKVLRD KWSEQEA ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQ+AL
Sbjct: 125 AALMAGLAPKTKVLRDGKWSEQEAAILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 184 TGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 243
TGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT
Sbjct: 185 TGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 244
Query: 244 AIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 303
AIGNFCICSIAVGM +EI+VM+ IQ+R YR+GIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIAVGMLVEIVVMYPIQQRKYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 304 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLA 363
HRLS+QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+LIEVF K D D ++L
Sbjct: 305 HRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFPKDMDKDSVVLL 364
Query: 364 AARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRT 423
AARASRVENQDAIDASIVGML DPKEARAGITEVHFLPFNPVDKRTAITYID+NGDWHR
Sbjct: 365 AARASRVENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDANGDWHRC 424
Query: 424 SKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVG 483
SKGAPEQIIDLC LKG+++ KAH IIDN+A+RGLR+L V RQT+PEKTKES G PWEFVG
Sbjct: 425 SKGAPEQIIDLCELKGDVKDKAHSIIDNYADRGLRSLAVARQTIPEKTKESAGKPWEFVG 484
Query: 484 LLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQS 543
LLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQS
Sbjct: 485 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQS 544
Query: 544 KDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADI 603
KDESIA++PV+ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK+ADI
Sbjct: 545 KDESIATIPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI 604
Query: 604 GIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFL 663
GIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+
Sbjct: 605 GIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 664
Query: 664 LVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMA 723
L+AL+WKFDF PFM+LIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIF TG+VLGTY+A
Sbjct: 665 LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGIVLGTYLA 724
Query: 724 LVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVE 783
L+T FFWLIHDT FF++ F ++ I D ++AALYLQVSI+SQALIFVTRS+SWSFVE
Sbjct: 725 LITVLFFWLIHDTDFFSDKFGVRSIRHNRDEVTAALYLQVSIVSQALIFVTRSQSWSFVE 784
Query: 784 RPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVI 843
RPG++LVGAF+ AQL+AT IAVY W FARIEGIGWGWAGAIW+FSIITY PLD LKF+I
Sbjct: 785 RPGLLLVGAFIAAQLVATCIAVYPSWGFARIEGIGWGWAGAIWLFSIITYFPLDILKFII 844
Query: 844 RYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSEST--VNEKNSNR 901
RY SGKAWDNLLQNKTAFTTKKDYG+GEREAQWA+AQRT+HGLQ E++ N+ +S R
Sbjct: 845 RYGLSGKAWDNLLQNKTAFTTKKDYGRGEREAQWALAQRTLHGLQPPETSNLFNDNSSYR 904
Query: 902 ELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
EL+E+AEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV
Sbjct: 905 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147776860|emb|CAN61424.1| hypothetical protein VITISV_027272 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1680 bits (4351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 829/963 (86%), Positives = 889/963 (92%), Gaps = 17/963 (1%)
Query: 4 ISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKK------- 56
+SLEEIKNE+VDLERIP+ EVFEQLKCT GLT+ EGE RLQIFG+NKLEEKK
Sbjct: 5 MSLEEIKNESVDLERIPIEEVFEQLKCTKDGLTSEEGEXRLQIFGHNKLEEKKANFFYFI 64
Query: 57 --------ESKLLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFIN 108
ESK+LKFLGFMWNPLSWVME AAIMAIVLANGGGKPPDW DFVGI VLL IN
Sbjct: 65 TTLQYSFTESKILKFLGFMWNPLSWVMECAAIMAIVLANGGGKPPDWQDFVGITVLLIIN 124
Query: 109 STISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADA 168
STISFIEENNAGNAAAALMAGLAPKTKVLRD KWSEQEA ILVPGD+ISIKLGDIVPADA
Sbjct: 125 STISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDVISIKLGDIVPADA 184
Query: 169 RLLEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHL 228
RLLEGDPLKIDQ+ALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHL
Sbjct: 185 RLLEGDPLKIDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHL 244
Query: 229 VDSTNQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIP 288
VDSTNQVGHFQKVLTAIGNFCICSIAVGM +EI+VM+ IQ+R YR+GIDNLLVLLIGGIP
Sbjct: 245 VDSTNQVGHFQKVLTAIGNFCICSIAVGMLVEIVVMYPIQQRKYREGIDNLLVLLIGGIP 304
Query: 289 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLI 348
IAMPTVLSVTMAIGSHRLS+QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+LI
Sbjct: 305 IAMPTVLSVTMAIGSHRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLI 364
Query: 349 EVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKR 408
EVF K D D ++L AARASRVENQDAIDASIVGML DPKEARAGITEVHFLPFNPVDKR
Sbjct: 365 EVFPKDMDKDSVVLLAARASRVENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKR 424
Query: 409 TAITYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVP 468
TAITYID+NGDWHR SKGAPEQIIDLC LKG+++ KAH IIDN+A+RGLR+L V RQT+P
Sbjct: 425 TAITYIDANGDWHRCSKGAPEQIIDLCELKGDVKDKAHSIIDNYADRGLRSLAVARQTIP 484
Query: 469 EKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLG 528
EKTKES G PWEFVGLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLG
Sbjct: 485 EKTKESXGKPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 544
Query: 529 MGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMT 588
MGTNMYPSSSLLGQSKDESIA++PV+ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMT
Sbjct: 545 MGTNMYPSSSLLGQSKDESIATIPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMT 604
Query: 589 GDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYT 648
GDGVNDAPALK+ADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYT
Sbjct: 605 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYT 664
Query: 649 IYAVSITIRIVLGFLLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKL 708
IYAVSITIRIVLGF+L+AL+WKFDF PFM+LIIAILNDGTIMTISKDRVKPSPMPDSWKL
Sbjct: 665 IYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKL 724
Query: 709 KEIFGTGVVLGTYMALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQ 768
KEIF TG+VLGTY+AL+T FFWLIHDT FF++ F ++ I D +AALYLQVSI+SQ
Sbjct: 725 KEIFATGIVLGTYLALITVLFFWLIHDTDFFSDKFGVRSIRHNRDEXTAALYLQVSIVSQ 784
Query: 769 ALIFVTRSRSWSFVERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIF 828
ALIFVTRS+SWSFVERPG++LVGAF+ AQL+AT IAVY W FARIEGIGWGWAGAIW+F
Sbjct: 785 ALIFVTRSQSWSFVERPGLLLVGAFIAAQLVATCIAVYPSWGFARIEGIGWGWAGAIWLF 844
Query: 829 SIITYLPLDPLKFVIRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQ 888
SIITY PLD LKF+IRY SGKAWDNLLQNKTAFTTKKDYG+GEREAQWA+AQRT+HGLQ
Sbjct: 845 SIITYFPLDILKFIIRYGLSGKAWDNLLQNKTAFTTKKDYGRGEREAQWALAQRTLHGLQ 904
Query: 889 TSEST--VNEKNSNRELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQH 946
E++ N+ +S REL+E+AEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQH
Sbjct: 905 PPETSNLFNDNSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQH 964
Query: 947 YTV 949
YTV
Sbjct: 965 YTV 967
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|75214754|gb|ABA18104.1| putative plasma membrane ATPase [Capsella rubella] | Back alignment and taxonomy information |
|---|
Score = 1677 bits (4343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 804/947 (84%), Positives = 878/947 (92%), Gaps = 2/947 (0%)
Query: 3 DISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLK 62
+IS +EIK ENVDLERIPV EVFEQLKCT +GL++ EG+KRL+IFG NKLEEK E+K LK
Sbjct: 4 EISWDEIKKENVDLERIPVEEVFEQLKCTKEGLSSDEGKKRLEIFGANKLEEKSENKFLK 63
Query: 63 FLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNA 122
FLGFMWNPLSWVME+AAIMAIVLANGGGKPPDW DF+GI+VLL INSTISFIEENNAGNA
Sbjct: 64 FLGFMWNPLSWVMESAAIMAIVLANGGGKPPDWQDFIGIMVLLIINSTISFIEENNAGNA 123
Query: 123 AAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAA 182
A+ALMA LAPKTKVLRD KW EQEA ILVPGD+ISIKLGDIVPADARLL+GDPLKIDQ+A
Sbjct: 124 ASALMANLAPKTKVLRDGKWGEQEAAILVPGDLISIKLGDIVPADARLLQGDPLKIDQSA 183
Query: 183 LTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 242
LTGESLPVTK+PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVL
Sbjct: 184 LTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVL 243
Query: 243 TAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 302
T+IGNFCICSI +GM IEI++M+ IQ R+YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 244 TSIGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 303
Query: 303 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLL 362
SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVF + D+D ++L
Sbjct: 304 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPRNMDTDSVVL 363
Query: 363 AAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHR 422
AARASR+ENQDAIDASIVGML DPKEARAGITEVHFLPFNPVDKRTAITYID NGDWHR
Sbjct: 364 MAARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDENGDWHR 423
Query: 423 TSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFV 482
+SKGAPEQII+LC L+GE +RKAH++ID FAERGLR+LGV +QTVPEKTKES+GSPWEFV
Sbjct: 424 SSKGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFV 483
Query: 483 GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ 542
GLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIG ETGRRLGMGTNMYPS+SLLG
Sbjct: 484 GLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGN 543
Query: 543 SKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRAD 602
SKD+S+ +P++ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK+AD
Sbjct: 544 SKDDSLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 603
Query: 603 IGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 662
IGIAVADATDAARSASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGF
Sbjct: 604 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 663
Query: 663 LLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYM 722
+LVAL+W+FDF PFM+LIIAILNDGTIMTISKDRVKPSP+PDSWKL EIF TGVVLGTYM
Sbjct: 664 MLVALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYM 723
Query: 723 ALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFV 782
AL T FFWL HDT FF+ TF ++ I + L AALYLQVSIISQALIFVTRSRSWSFV
Sbjct: 724 ALTTVLFFWLAHDTNFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFV 783
Query: 783 ERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFV 842
ERPG +L+ AF++AQL+AT+IAVYA W FARI G GWGWAG IWI+SIITY+PLD LKF+
Sbjct: 784 ERPGFLLIIAFIIAQLVATLIAVYANWGFARIIGCGWGWAGVIWIYSIITYIPLDILKFI 843
Query: 843 IRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSESTVNEKNSNRE 902
IRYA +GKAWDN++Q KTAFTTKKDYGKGEREAQWA+AQRT+HGL E+ ++K N E
Sbjct: 844 IRYALTGKAWDNMIQQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEAMFHDK--NHE 901
Query: 903 LNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
L+E+AEQAKRRAEVARLRELHTLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 902 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
Source: Capsella rubella Species: Capsella rubella Genus: Capsella Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449457931|ref|XP_004146701.1| PREDICTED: ATPase 8, plasma membrane-type-like [Cucumis sativus] gi|449517818|ref|XP_004165941.1| PREDICTED: ATPase 8, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1676 bits (4340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 826/949 (87%), Positives = 892/949 (93%), Gaps = 1/949 (0%)
Query: 1 MGDISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKL 60
MGDISLE++KNEN+DLERIPV EVFEQLKCT +GL+TAEGEKRLQIFG NKLEEKKESKL
Sbjct: 1 MGDISLEDVKNENIDLERIPVEEVFEQLKCTKEGLSTAEGEKRLQIFGPNKLEEKKESKL 60
Query: 61 LKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAG 120
LKFLGFMWNPLSWVME AAIMAIVLANGGGKPPDW DFVGI+VLL INSTISFIEENNAG
Sbjct: 61 LKFLGFMWNPLSWVMECAAIMAIVLANGGGKPPDWQDFVGIIVLLIINSTISFIEENNAG 120
Query: 121 NAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQ 180
NAAAALMAGLAPKTKVLRD KW E+EA ILVPGD+IS+KLGDI+PADARLLEGDPLKIDQ
Sbjct: 121 NAAAALMAGLAPKTKVLRDGKWKEEEAAILVPGDVISVKLGDIIPADARLLEGDPLKIDQ 180
Query: 181 AALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQK 240
+ALTGESLPVTK+PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQK
Sbjct: 181 SALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQK 240
Query: 241 VLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 300
VLTAIGNFCICSIAVGM IEI+VM+ IQ R+YR+GIDNLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 241 VLTAIGNFCICSIAVGMVIEILVMYPIQHRAYREGIDNLLVLLIGGIPIAMPTVLSVTMA 300
Query: 301 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGL 360
IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKSLIEVFV D D +
Sbjct: 301 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIEVFVPNMDKDTV 360
Query: 361 LLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDW 420
+L AARASRVENQDAIDA IVGML DPKEARAGITEVHFLPFNPV+KRTAITYID +G+W
Sbjct: 361 MLFAARASRVENQDAIDACIVGMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDGDGNW 420
Query: 421 HRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWE 480
HR+SKGAPEQIIDLC LKGE+RRKAH+IIDN+A RGLR+L VGRQTV +K KES G PWE
Sbjct: 421 HRSSKGAPEQIIDLCELKGEIRRKAHEIIDNYANRGLRSLAVGRQTVKDKDKESAGEPWE 480
Query: 481 FVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL 540
FVGLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL
Sbjct: 481 FVGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL 540
Query: 541 GQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKR 600
GQSKDESIAS+PV+ELIEKADGFAGVFPEHKYEIVKKLQER HICGMTGDGVNDAPALK+
Sbjct: 541 GQSKDESIASIPVDELIEKADGFAGVFPEHKYEIVKKLQERNHICGMTGDGVNDAPALKK 600
Query: 601 ADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVL 660
ADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVL
Sbjct: 601 ADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVL 660
Query: 661 GFLLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGT 720
GF+LVAL+WKFDF PFM+LIIAILNDGTIMTISKDRVKPSP+PDSWKLKEIF TGVVLGT
Sbjct: 661 GFMLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLKEIFATGVVLGT 720
Query: 721 YMALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWS 780
YMAL+T FFWL ++T FFTNTF +K + + + +++ALYLQVSIISQALIFVTRSRSWS
Sbjct: 721 YMALMTVVFFWLANETNFFTNTFGVKPLKDLAE-INSALYLQVSIISQALIFVTRSRSWS 779
Query: 781 FVERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLK 840
FVE PG +LV AF+ AQL+AT+IAVY++W FARI+GIGWGWAGAIW+FSI+TY PLD LK
Sbjct: 780 FVECPGFLLVIAFIAAQLVATLIAVYSEWNFARIKGIGWGWAGAIWVFSIVTYFPLDVLK 839
Query: 841 FVIRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSESTVNEKNSN 900
F IRY SGKAWDN+L+NKTAFTTKKDYGKGEREAQWA+AQRTMHGLQ E+ +EK++
Sbjct: 840 FAIRYGLSGKAWDNMLENKTAFTTKKDYGKGEREAQWAIAQRTMHGLQPPETIFHEKSNY 899
Query: 901 RELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
+L+E+AEQAK+RAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV
Sbjct: 900 EDLSEIAEQAKKRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 948
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224142437|ref|XP_002324564.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222865998|gb|EEF03129.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1660 bits (4300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 822/949 (86%), Positives = 887/949 (93%)
Query: 1 MGDISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKL 60
MGD+SLE+IKNEN+DLERIPV EVF+QL+CT +GLT+A+GE+RL+IFG NKLEEKKE K
Sbjct: 1 MGDVSLEQIKNENIDLERIPVEEVFDQLRCTREGLTSAQGEERLKIFGPNKLEEKKECKF 60
Query: 61 LKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAG 120
LKFLGFMWNPLSWVMEAAAIMAI LANGGGKPPDW DFVGIVVLL INSTISFIEENNAG
Sbjct: 61 LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVVLLIINSTISFIEENNAG 120
Query: 121 NAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQ 180
NAAAALMAGLAPKTKVLRD KWSEQ+A ILVPGD+ISIKLGDI+PADARL+EGDPLKIDQ
Sbjct: 121 NAAAALMAGLAPKTKVLRDGKWSEQDAAILVPGDLISIKLGDIIPADARLMEGDPLKIDQ 180
Query: 181 AALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQK 240
+ALTGESLPVTKNPGD +FSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TN VGHFQK
Sbjct: 181 SALTGESLPVTKNPGDGIFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDNTNNVGHFQK 240
Query: 241 VLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 300
VLTAIGNFCICSIA+GM IEIIVM+ IQ R YR+GIDNLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 241 VLTAIGNFCICSIAIGMLIEIIVMYPIQNRRYREGIDNLLVLLIGGIPIAMPTVLSVTMA 300
Query: 301 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGL 360
IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+LIEVF K D D L
Sbjct: 301 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKDMDRDTL 360
Query: 361 LLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDW 420
LL AARA+R+ENQDAIDASIVGML DPKEARA ITEVHFLPFNPV+KRTAITY DS GDW
Sbjct: 361 LLHAARAARIENQDAIDASIVGMLGDPKEARADITEVHFLPFNPVEKRTAITYYDSKGDW 420
Query: 421 HRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWE 480
+R+SKGAPEQIIDLC L+GEM +KAH+IIDNFA+RGLR+LGV RQT+PEK KESEG PWE
Sbjct: 421 YRSSKGAPEQIIDLCQLEGEMEKKAHEIIDNFADRGLRSLGVARQTIPEKNKESEGGPWE 480
Query: 481 FVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL 540
FVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL
Sbjct: 481 FVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL 540
Query: 541 GQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKR 600
G SKDE IA +PV+ELIEKADGFAGVFPEHKYEIVKKLQE KHICGMTGDGVNDAPALK+
Sbjct: 541 GNSKDEGIAGIPVDELIEKADGFAGVFPEHKYEIVKKLQEMKHICGMTGDGVNDAPALKK 600
Query: 601 ADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVL 660
ADIGIAVADATDAAR ASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVL
Sbjct: 601 ADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 660
Query: 661 GFLLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGT 720
GFLLVAL+WKFDF PFM+LIIAILNDGTIMTISKDRVKPSP+PDSWKLKEIF TGVVLGT
Sbjct: 661 GFLLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLKEIFATGVVLGT 720
Query: 721 YMALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWS 780
YM+++T FFWL+HDT FF+ F ++ I KPD L+AALYLQVSIISQALIFVTRSRSWS
Sbjct: 721 YMSIMTVVFFWLVHDTDFFSEKFGVRSIRGKPDELTAALYLQVSIISQALIFVTRSRSWS 780
Query: 781 FVERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLK 840
FVE PG++LVGAF+ AQL+ATIIAVYA W FARI+G+GWGWAG IWI+SIITY+PLD LK
Sbjct: 781 FVECPGLLLVGAFIAAQLMATIIAVYATWSFARIQGVGWGWAGIIWIYSIITYIPLDILK 840
Query: 841 FVIRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSESTVNEKNSN 900
F+IRYA +GKAWDNLLQNKTAFTTKKDYGKGEREAQWA AQRT+HGLQ E+ N+K +
Sbjct: 841 FIIRYALTGKAWDNLLQNKTAFTTKKDYGKGEREAQWATAQRTLHGLQPPETMFNDKTTY 900
Query: 901 RELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
RELNELAEQAK+RAEVARLRELHTLKGHV+SVVK+KGLDIETIQQHYTV
Sbjct: 901 RELNELAEQAKKRAEVARLRELHTLKGHVDSVVKMKGLDIETIQQHYTV 949
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224091663|ref|XP_002309321.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222855297|gb|EEE92844.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1658 bits (4294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 820/949 (86%), Positives = 889/949 (93%)
Query: 1 MGDISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKL 60
MGD+SLE+IKNEN+DLERIPV EVF+QL+CT +GL+TA+GE+RL+IFG NKLEEK+ESK
Sbjct: 1 MGDVSLEQIKNENIDLERIPVEEVFQQLRCTKEGLSTAQGEERLKIFGPNKLEEKRESKF 60
Query: 61 LKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAG 120
LKFLGFMWNPLSWVMEAAAIMAI LANGGGKPPDW DFVGIVVLL INSTISFIEENNAG
Sbjct: 61 LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVVLLIINSTISFIEENNAG 120
Query: 121 NAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQ 180
NAAAALMAGLAPKTKVLRD KW E++A ILVPGD+ISIKLGDIVPADARL++GDPLKIDQ
Sbjct: 121 NAAAALMAGLAPKTKVLRDGKWMEEDASILVPGDMISIKLGDIVPADARLMKGDPLKIDQ 180
Query: 181 AALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQK 240
+ALTGESLPVTK+PG+ VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQK
Sbjct: 181 SALTGESLPVTKHPGEGVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQK 240
Query: 241 VLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 300
VLTAIGNFCICSIA+GM +EIIVM+ IQ R YR+GIDNLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 241 VLTAIGNFCICSIAIGMLVEIIVMYPIQNRRYREGIDNLLVLLIGGIPIAMPTVLSVTMA 300
Query: 301 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGL 360
IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKSLIEVF+K D D L
Sbjct: 301 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIEVFIKDMDKDTL 360
Query: 361 LLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDW 420
LL AARASR+ENQDAIDASIVGML DPKEARA ITEVHFLPFNPV+KRTAITY D+NGDW
Sbjct: 361 LLLAARASRIENQDAIDASIVGMLGDPKEARAEITEVHFLPFNPVEKRTAITYYDNNGDW 420
Query: 421 HRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWE 480
HR+SKGAPEQII+LC +KGE ++KAH+IIDNFAERGLR+LGV RQ +PEKTKESEG+PWE
Sbjct: 421 HRSSKGAPEQIIELCNVKGETKKKAHEIIDNFAERGLRSLGVARQRIPEKTKESEGAPWE 480
Query: 481 FVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL 540
FVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL
Sbjct: 481 FVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL 540
Query: 541 GQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKR 600
G SKDESI+ +PV+ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK+
Sbjct: 541 GNSKDESISGIPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKK 600
Query: 601 ADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVL 660
ADIGIAVADATDAARSASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVL
Sbjct: 601 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 660
Query: 661 GFLLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGT 720
GFLLVAL+WKFDF PFM+LIIAILNDGTIMTISKDRVKPSP+PDSWKLKEIF TGVVLGT
Sbjct: 661 GFLLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLKEIFATGVVLGT 720
Query: 721 YMALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWS 780
YMA++T FFWL HDT FF F ++ I KPD L+AALYLQVSIISQALIFVTRSRSWS
Sbjct: 721 YMAIMTVLFFWLAHDTDFFPEKFGVRTIRGKPDELTAALYLQVSIISQALIFVTRSRSWS 780
Query: 781 FVERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLK 840
FVE PG++LV AF+ AQL+AT+IAVYA W FARIEGIGWGWAG IW+FSIITY+PLD +K
Sbjct: 781 FVECPGLLLVSAFIAAQLVATLIAVYASWSFARIEGIGWGWAGIIWLFSIITYIPLDIIK 840
Query: 841 FVIRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSESTVNEKNSN 900
F+IRYA +GKAWDN+LQNKTAFT KKDYGKGEREAQWA AQRT+HGLQ E+ N+K +
Sbjct: 841 FIIRYALTGKAWDNMLQNKTAFTNKKDYGKGEREAQWATAQRTLHGLQPPETMFNDKTTY 900
Query: 901 RELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
REL+ELAEQAK+RAEVARLRELHTLKGHV+SVVK+KGLDIETIQQHYTV
Sbjct: 901 RELSELAEQAKKRAEVARLRELHTLKGHVDSVVKMKGLDIETIQQHYTV 949
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|402465300|gb|AAK31799.2| plasma membrane H+ ATPase [Lilium longiflorum] | Back alignment and taxonomy information |
|---|
Score = 1641 bits (4249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 807/948 (85%), Positives = 876/948 (92%), Gaps = 3/948 (0%)
Query: 4 ISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLKF 63
ISLEEIKNE VDLERIPV EVF QLKCT +GLTTAEGE+RLQIFG NKLEEKKESK LKF
Sbjct: 5 ISLEEIKNETVDLERIPVEEVFTQLKCTKEGLTTAEGEQRLQIFGPNKLEEKKESKFLKF 64
Query: 64 LGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAA 123
LGFMWNPLSWVME AAIMAIVLANGGGKPPDW DFVGI+VLL INSTISFIEENNAGNAA
Sbjct: 65 LGFMWNPLSWVMEIAAIMAIVLANGGGKPPDWQDFVGIMVLLIINSTISFIEENNAGNAA 124
Query: 124 AALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAAL 183
AALMAGLAPKTKVLRD +WSEQEA ILVPGDIISIKLGDIVPADARLLEGDPLKIDQ+AL
Sbjct: 125 AALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 184 TGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 243
TGESLPVTKNPGDEVFSGSTCKQGEIEA+VIATGVHTFFGKAAHLVDSTN VGHFQ VLT
Sbjct: 185 TGESLPVTKNPGDEVFSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNNVGHFQIVLT 244
Query: 244 AIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 303
AIGNFCICSIA+GM +E++VM+ IQ R YR+GIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIALGMLVEVVVMYPIQHRKYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 304 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLA 363
HRLS+QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+LIEVF K TD DG+LL
Sbjct: 305 HRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKDTDKDGVLLY 364
Query: 364 AARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRT 423
AARASRVENQDAIDA IVGMLADPKEARAGI EVHFLPFNPV+KRTA TYIDSNG WHR
Sbjct: 365 AARASRVENQDAIDACIVGMLADPKEARAGIQEVHFLPFNPVEKRTANTYIDSNGKWHRA 424
Query: 424 SKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVG 483
SKGAPEQIIDLC LK +++RK H+IID FA+RGLR+LGV RQ VPE +KES G PWEF+G
Sbjct: 425 SKGAPEQIIDLCNLKEDVKRKVHEIIDKFADRGLRSLGVARQQVPEASKESTGGPWEFMG 484
Query: 484 LLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQS 543
LLPLFDPPRHDSAETIRRAL LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLG
Sbjct: 485 LLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSTLLGDK 544
Query: 544 KDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADI 603
E+ +P++ELIEKADGFAGVFPEHKYEIVK+LQ+RKHICGMTGDGVNDAPALK+ADI
Sbjct: 545 IHEA-TGLPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKKADI 603
Query: 604 GIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFL 663
GIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+
Sbjct: 604 GIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 663
Query: 664 LVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMA 723
L+AL+W+FDF PFM+LIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIF TGV+LG Y+A
Sbjct: 664 LIALIWRFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVILGAYLA 723
Query: 724 LVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVE 783
L+T FFW+ HDT FT F ++ I + + L++ALYLQVSI+SQALIFVTRSRSWSFVE
Sbjct: 724 LMTVIFFWIAHDTDHFTKAFGVRPIGDDINQLTSALYLQVSIVSQALIFVTRSRSWSFVE 783
Query: 784 RPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVI 843
RPG++LV AFL AQL+AT+IAVYA W FARI+GIGWGWAG IWIFSI+TY PLD LKF+I
Sbjct: 784 RPGLLLVTAFLAAQLVATLIAVYASWGFARIDGIGWGWAGVIWIFSIVTYFPLDILKFII 843
Query: 844 RYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSEST--VNEKNSNR 901
RYA SG+AWDNL+QNKTAFT+KKDYGKGEREAQWA AQRT+HGLQT++++ N+KN+ R
Sbjct: 844 RYALSGRAWDNLIQNKTAFTSKKDYGKGEREAQWATAQRTLHGLQTADTSNLFNDKNNYR 903
Query: 902 ELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
EL+E+AEQAKRRAEVARLRELHTLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 904 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 951
|
Source: Lilium longiflorum Species: Lilium longiflorum Genus: Lilium Family: Liliaceae Order: Liliales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|402465302|gb|ABO15469.2| plasma membrane H+-ATPase LilHA2 [Lilium longiflorum] | Back alignment and taxonomy information |
|---|
Score = 1641 bits (4249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 808/948 (85%), Positives = 872/948 (91%), Gaps = 3/948 (0%)
Query: 4 ISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLKF 63
ISLEEIKNE VDLERIPV EVF QLKCT +GLT AEGEKRLQIFG NKLEEK ESK LKF
Sbjct: 8 ISLEEIKNETVDLERIPVDEVFAQLKCTKEGLTAAEGEKRLQIFGPNKLEEKTESKFLKF 67
Query: 64 LGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAA 123
LGFMWNPLSWVME AAIMAIV+ANGGGKPPDW DFVGI+VLL INSTISFIEENNAGNAA
Sbjct: 68 LGFMWNPLSWVMEIAAIMAIVMANGGGKPPDWQDFVGIMVLLVINSTISFIEENNAGNAA 127
Query: 124 AALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAAL 183
AALMAGLAPKTKVLRD KWSEQEA ILVPGDIISIKLGDIVPADARLLEGDPLKIDQ+AL
Sbjct: 128 AALMAGLAPKTKVLRDGKWSEQEACILVPGDIISIKLGDIVPADARLLEGDPLKIDQSAL 187
Query: 184 TGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 243
TGESLPVTKNPGDEVFSGSTCKQGEIEA+VIATGVHTFFGKAAHLVDSTN VGHFQKVLT
Sbjct: 188 TGESLPVTKNPGDEVFSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNNVGHFQKVLT 247
Query: 244 AIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 303
AIGNFCICSIAVGMF+EI+VM+ IQ R YR+GIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 248 AIGNFCICSIAVGMFVEIVVMYPIQHRKYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 307
Query: 304 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLA 363
HRLS+QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+LIEVF K D D +LL
Sbjct: 308 HRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFGKDADKDAVLLY 367
Query: 364 AARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRT 423
AARASRVENQDAIDA IVGMLADPKEARAGI EVHFLPFNPVDKRTA TYIDSNG WHR
Sbjct: 368 AARASRVENQDAIDACIVGMLADPKEARAGIQEVHFLPFNPVDKRTANTYIDSNGKWHRA 427
Query: 424 SKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVG 483
SKGAPEQIIDLC LK + ++K H+IID FA+RGLR+LGV RQ VPE +KES G PWEF+G
Sbjct: 428 SKGAPEQIIDLCNLKEDTKKKVHEIIDKFADRGLRSLGVARQQVPEASKESAGGPWEFMG 487
Query: 484 LLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQS 543
LLPLFDPPRHDSAETIRRAL LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLG
Sbjct: 488 LLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSTLLGNQ 547
Query: 544 KDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADI 603
E+ +P++ELIEKADGFAGVFPEHKYEIVK+LQ+RKHICGMTGDGVNDAPALK+ADI
Sbjct: 548 SHEA-TGLPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKKADI 606
Query: 604 GIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFL 663
GIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+
Sbjct: 607 GIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 666
Query: 664 LVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMA 723
L+AL+W FDF PFM+LIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIF TG+VLG Y+A
Sbjct: 667 LIALIWHFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGIVLGAYLA 726
Query: 724 LVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVE 783
++T FFW++HDT +FT F + I + + L++ALYLQVSI+SQALIFVTRSRSWSFVE
Sbjct: 727 IMTVIFFWIVHDTDYFTKAFGVSPIGDNINQLTSALYLQVSIVSQALIFVTRSRSWSFVE 786
Query: 784 RPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVI 843
RPG++LV AFL AQL+AT+I+VYA W FARI+GIGW WAG IWIFSI+TY PLD LKF+I
Sbjct: 787 RPGLLLVTAFLAAQLVATVISVYASWGFARIDGIGWRWAGVIWIFSIVTYFPLDILKFII 846
Query: 844 RYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSEST--VNEKNSNR 901
RYA SGKAWDNL+QNKTAFT+KKDYGKGEREAQWA AQRT+HGLQT++++ N+KNS R
Sbjct: 847 RYALSGKAWDNLIQNKTAFTSKKDYGKGEREAQWATAQRTLHGLQTADTSSLFNDKNSYR 906
Query: 902 ELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
EL+E+AEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV
Sbjct: 907 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 954
|
Source: Lilium longiflorum Species: Lilium longiflorum Genus: Lilium Family: Liliaceae Order: Liliales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297815396|ref|XP_002875581.1| hypothetical protein ARALYDRAFT_323063 [Arabidopsis lyrata subsp. lyrata] gi|297321419|gb|EFH51840.1| hypothetical protein ARALYDRAFT_323063 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1640 bits (4247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 805/947 (85%), Positives = 876/947 (92%), Gaps = 2/947 (0%)
Query: 3 DISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLK 62
DIS +EIK ENVDLERIPV EVFEQLKC+ +GL++ EG+KRL+IFG NKLEEK E+K LK
Sbjct: 4 DISWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGKKRLEIFGANKLEEKSENKFLK 63
Query: 63 FLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNA 122
FLGFMWNPLSWVME+AAIMAIVLANGGGKPPDW DF+GI+VLL INSTISFIEENNAGNA
Sbjct: 64 FLGFMWNPLSWVMESAAIMAIVLANGGGKPPDWQDFIGIMVLLIINSTISFIEENNAGNA 123
Query: 123 AAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAA 182
AAALMA LAPKTKVLRD KW EQEA ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQ+A
Sbjct: 124 AAALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSA 183
Query: 183 LTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 242
LTGESLPVTK+PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVL
Sbjct: 184 LTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVL 243
Query: 243 TAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 302
T+IGNFCICSI +GM IEI++M+ IQ R+YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 244 TSIGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 303
Query: 303 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLL 362
SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVF K D+D ++L
Sbjct: 304 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDTDSVVL 363
Query: 363 AAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHR 422
AARASR+ENQDAIDASIVGML DPKEAR GITEVHFLPFNPVDKRTAITYID +GDWHR
Sbjct: 364 MAARASRIENQDAIDASIVGMLGDPKEARTGITEVHFLPFNPVDKRTAITYIDESGDWHR 423
Query: 423 TSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFV 482
+SKGAPEQII+LC L+GE +RKAH++ID FAERGLR+LGV +QTVPEKTKES+GSPWEFV
Sbjct: 424 SSKGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFV 483
Query: 483 GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ 542
GLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIG ETGRRLGMGTNMYPS+SLLG
Sbjct: 484 GLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGN 543
Query: 543 SKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRAD 602
SKDES+ +P++ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK+AD
Sbjct: 544 SKDESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 603
Query: 603 IGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 662
IGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF
Sbjct: 604 IGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 663
Query: 663 LLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYM 722
+LVAL+W+FDF PFM+LIIAILNDGTIMTISKDRVKPSP+PDSWKL EIF TGVVLGTYM
Sbjct: 664 MLVALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYM 723
Query: 723 ALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFV 782
AL T FFWL HDT FF+ TF ++ I + L AALYLQVSIISQALIFVTRSRSWSFV
Sbjct: 724 ALTTVLFFWLAHDTNFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFV 783
Query: 783 ERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFV 842
ERPG +L+ AF++AQL+AT+IAVYA W FARI G GWGWAG IW++SIITY+PLD LKF+
Sbjct: 784 ERPGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGVIWVYSIITYIPLDILKFI 843
Query: 843 IRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSESTVNEKNSNRE 902
IRYA +GKAWDN++ KTAFTTKKDYGKGEREAQWA+AQRT+HGL E+ ++ N N E
Sbjct: 844 IRYALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEAMFHD-NKN-E 901
Query: 903 LNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
L+E+AEQAKRRAEVARLRELHTLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 902 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 949 | ||||||
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.995 | 0.996 | 0.793 | 0.0 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.996 | 0.996 | 0.775 | 0.0 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.997 | 0.992 | 0.761 | 0.0 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.993 | 0.993 | 0.761 | 0.0 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.993 | 0.993 | 0.757 | 0.0 | |
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.994 | 0.994 | 0.736 | 0.0 | |
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 1.0 | 0.992 | 0.725 | 0.0 | |
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.994 | 0.983 | 0.730 | 0.0 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.996 | 0.984 | 0.673 | 0.0 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.985 | 0.987 | 0.655 | 0.0 |
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3860 (1363.8 bits), Expect = 0., P = 0.
Identities = 751/947 (79%), Positives = 819/947 (86%)
Query: 3 DISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNXXXXXXXXXXXX 62
+ S +EIK ENVDLERIPV EVFEQLKC+ +GL++ EG KRL+IFG N
Sbjct: 4 EFSWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLK 63
Query: 63 FLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEEXXXXXX 122
FLGFMWNPLSWVME+AAIMAIVLANGGGK PDW DF+GI+VLL INSTISFIEE
Sbjct: 64 FLGFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNA 123
Query: 123 XXXXXXXXXPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAA 182
PKTKVLRD KW EQEA ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQ+A
Sbjct: 124 AAALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSA 183
Query: 183 LTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 242
LTGESLP TK+PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVL
Sbjct: 184 LTGESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVL 243
Query: 243 TAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 302
T+IGNFCICSI +GM IEI++M+ IQ R+YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 244 TSIGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 303
Query: 303 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLL 362
SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVF K DSD ++L
Sbjct: 304 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVL 363
Query: 363 AAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHR 422
AARASR+ENQDAIDASIVGML DPKEARAGITEVHFLPFNPVDKRTAITYID +GDWHR
Sbjct: 364 MAARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHR 423
Query: 423 TSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFV 482
+SKGAPEQII+LC L+GE +RKAH++ID FAERGLR+LGV +QTVPEKTKES+GSPWEFV
Sbjct: 424 SSKGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFV 483
Query: 483 GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ 542
GLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIG ETGRRLGMGTNMYPS+SLLG
Sbjct: 484 GLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGN 543
Query: 543 SKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRXX 602
SKDES+ +P++ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK+
Sbjct: 544 SKDESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 603
Query: 603 XXXXXXXXXXXXXXXXXXVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 662
VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGF
Sbjct: 604 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 663
Query: 663 LLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYM 722
+LVAL+W+FDF PFM+LIIAILNDGTIMTISKDRVKPSP+PDSWKL EIF TGVVLGTYM
Sbjct: 664 MLVALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYM 723
Query: 723 ALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFV 782
AL T FFWL HDT FF+ TF ++ I + L AALYLQVSIISQALIFVTRSRSWSFV
Sbjct: 724 ALTTVLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFV 783
Query: 783 ERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEXXXXXXXXXXXXFSIITYLPLDPLKFV 842
ERPG +L+ AF++AQL+AT+IAVYA W FARI +SIITY+PLD LKF+
Sbjct: 784 ERPGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFI 843
Query: 843 IRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSESTVNEKNSNRE 902
IRYA +GKAWDN++ KTAFTTKKDYGKGEREAQWA+AQRT+HGL E+ N+ N N E
Sbjct: 844 IRYALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEAMFND-NKN-E 901
Query: 903 LNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
L+E+AEQAKRRAEVARLRELHTLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 902 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3772 (1332.9 bits), Expect = 0., P = 0.
Identities = 734/947 (77%), Positives = 809/947 (85%)
Query: 3 DISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNXXXXXXXXXXXX 62
DIS +EIK ENVDLE+IPV EVF+QLKC+ +GL++ EG RLQIFG N
Sbjct: 4 DISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLK 63
Query: 63 FLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEEXXXXXX 122
FLGFMWNPLSWVMEAAAIMAIVLANGGG+PPDW DFVGI LL INSTISFIEE
Sbjct: 64 FLGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNA 123
Query: 123 XXXXXXXXXPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAA 182
PKTKVLRD +W EQEA ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQ+A
Sbjct: 124 AAALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSA 183
Query: 183 LTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 242
LTGESLP TK+ GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVL
Sbjct: 184 LTGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVL 243
Query: 243 TAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 302
TAIGNFCICSI +GM IEII+M+ IQ R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 244 TAIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 303
Query: 303 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLL 362
SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+LIEVF K D D ++L
Sbjct: 304 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVIL 363
Query: 363 AAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHR 422
+ARASRVENQDAID SIV ML DPKEARAGITEVHFLPFNPV+KRTAITYID+NG+WHR
Sbjct: 364 LSARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHR 423
Query: 423 TSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFV 482
SKGAPEQII+LC LKGE +R+AH+IID FAERGLR+LGV RQ VPEK KES G+PWEFV
Sbjct: 424 CSKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFV 483
Query: 483 GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ 542
GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL +
Sbjct: 484 GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-E 542
Query: 543 SKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRXX 602
+KD++ +PV+ELIEKADGFAGVFPEHKYEIV+KLQERKHI GMTGDGVNDAPALK+
Sbjct: 543 NKDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKAD 602
Query: 603 XXXXXXXXXXXXXXXXXXVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 662
VLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF
Sbjct: 603 IGIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 662
Query: 663 LLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYM 722
+LVAL+W+FDF PFM+LIIAILNDGTIMTISKDRVKPSP+PDSWKLKEIF TGVVLGTYM
Sbjct: 663 MLVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYM 722
Query: 723 ALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFV 782
ALVT FFWL HDT FF++ F ++ + K + L A LYLQVSIISQALIFVTRSRSWSFV
Sbjct: 723 ALVTVVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTRSRSWSFV 782
Query: 783 ERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEXXXXXXXXXXXXFSIITYLPLDPLKFV 842
ERPG++L+ AF VAQL+AT+IA YA WEFARI+ +SI+TY+PLD LKF+
Sbjct: 783 ERPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFI 842
Query: 843 IRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSESTVNEKNSNRE 902
RY SGKAW+N+++N+TAFTTKKDYG+GEREAQWA+AQRT+HGL+ ES + + E
Sbjct: 843 TRYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPESMFEDTATYTE 902
Query: 903 LNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
L+E+AEQAK+RAEVARLRE+HTLKGHVESVVKLKGLDI+ + QHYTV
Sbjct: 903 LSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3748 (1324.4 bits), Expect = 0., P = 0.
Identities = 723/949 (76%), Positives = 807/949 (85%)
Query: 3 DISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNXXXXXXXXXXXX 62
D S ++IKNE +DLE+IP+ EV QL+CT +GLT+ EG+ RL+IFG N
Sbjct: 6 DSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKENKVLK 65
Query: 63 FLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEEXXXXXX 122
FLGFMWNPLSWVME AAIMAI LANGGG+PPDW DFVGI VLL INSTISFIEE
Sbjct: 66 FLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEENNAGNA 125
Query: 123 XXXXXXXXXPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAA 182
PKTKVLRD KWSEQEA ILVPGDIISIKLGDIVPAD RLL+GDPLKIDQ+A
Sbjct: 126 AAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLKIDQSA 185
Query: 183 LTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 242
LTGESLPVTK+PG EV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVL
Sbjct: 186 LTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVL 245
Query: 243 TAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 302
TAIGNFCICSIA+GM IEI+VM+ IQ+R+YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 246 TAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305
Query: 303 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLL 362
SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKS++EVFVK D D LL+
Sbjct: 306 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDKDQLLV 365
Query: 363 AAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHR 422
AARASRVENQDAIDA IVGML DP+EAR GITEVHF PFNPVDKRTAITYID+NG+WHR
Sbjct: 366 NAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDANGNWHR 425
Query: 423 TSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFV 482
SKGAPEQII+LC L+ + ++AH IID FA+RGLR+L VGRQTV EK K S G PW+F+
Sbjct: 426 VSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPWQFL 485
Query: 483 GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ 542
GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ
Sbjct: 486 GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ 545
Query: 543 SKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRXX 602
KDESIAS+PV+ELIEKADGFAGVFPEHKYEIVK+LQE KHICGMTGDGVNDAPALKR
Sbjct: 546 DKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALKRAD 605
Query: 603 XXXXXXXXXXXXXXXXXXVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 662
VLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIV+GF
Sbjct: 606 IGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVMGF 665
Query: 663 LLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYM 722
+L+AL+WKFDF PFM+LI+AILNDGTIMTISKDRVKPSP+PDSWKLKEIF TGVVLGTY+
Sbjct: 666 MLLALIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGTYL 725
Query: 723 ALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFV 782
A++T FFW T FF+ F ++ I P L+AA+YLQVSI+SQALIFVTRSRSWS+V
Sbjct: 726 AVMTVVFFWAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFVTRSRSWSYV 785
Query: 783 ERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEXXXXXXXXXXXXFSIITYLPLDPLKFV 842
ERPG L+ AF +AQL+AT+IAVYA W FARI +SI+ Y+PLD LKF+
Sbjct: 786 ERPGFWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPLDILKFI 845
Query: 843 IRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSEST--VNEKNSN 900
IRY+ SG+AWDN+++NKTAFT+KKDYGKGEREAQWA AQRT+HGLQ ++++ N+K++
Sbjct: 846 IRYSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMFNDKSTY 905
Query: 901 RELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
REL+E+A+QAKRRAEVARLRE HTLKGHVESVVK KGLDIE IQQHYT+
Sbjct: 906 RELSEIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3705 (1309.3 bits), Expect = 0., P = 0.
Identities = 720/946 (76%), Positives = 798/946 (84%)
Query: 6 LEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNXXXXXXXXXXXXFLG 65
LE+I NENVDLE+IP+ EVF+QLKC+ +GL+ AEGE RLQIFG N FLG
Sbjct: 5 LEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLKFLG 64
Query: 66 FMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEEXXXXXXXXX 125
FMWNPLSWVMEAAAIMAI LANGGGKPPDW DFVGIV LL INSTISF+EE
Sbjct: 65 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNAAAA 124
Query: 126 XXXXXXPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTG 185
PKTKVLRD KWSEQEA ILVPGDI+SIKLGDI+PADARLLEGDPLK+DQ+ALTG
Sbjct: 125 LMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 184
Query: 186 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 245
ESLP TK PG+EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI
Sbjct: 185 ESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 244
Query: 246 GNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 305
GNFCICSIAVG+ IEI+VM+ IQRR YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 245 GNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHK 304
Query: 306 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAA 365
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK+LIEV+ KG + D +LL AA
Sbjct: 305 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLLFAA 364
Query: 366 RASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSK 425
RASRVENQDAIDA++VGMLADPKEARAGI E+HFLPFNPVDKRTA+T+IDSNG+WHR SK
Sbjct: 365 RASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHRVSK 424
Query: 426 GAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLL 485
GAPEQI+DLC + ++R++ H ID +AERGLR+L V RQTVPEKTKES GSPWEFVG+L
Sbjct: 425 GAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFVGVL 484
Query: 486 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKD 545
PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAI KETGRRLGMG+NMYPSSSLLG+ KD
Sbjct: 485 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGKHKD 544
Query: 546 ESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRXXXXX 605
E++A +PVE+LIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK+
Sbjct: 545 EAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 604
Query: 606 XXXXXXXXXXXXXXXVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLV 665
VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+L+
Sbjct: 605 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 664
Query: 666 ALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALV 725
AL+WKFDF PFM+LIIAILNDGTIMTISKDRVKPSP PDSWKLKEIF TGVVLG YMA++
Sbjct: 665 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYMAIM 724
Query: 726 TAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVERP 785
T FFW + T FF TF+++++ + +ALYLQVSI+SQALIFVTRSRSWSF ERP
Sbjct: 725 TVVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFVTRSRSWSFTERP 784
Query: 786 GVMLVGAFLVAQLLATIIAVYAKWEFARIEXXXXXXXXXXXXFSIITYLPLDPLKFVIRY 845
G L+ AF VAQL+AT IAVY WEFARI+ +SI+ Y PLD +KF IRY
Sbjct: 785 GYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDIMKFAIRY 844
Query: 846 AQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSEST--VNEKNSNREL 903
+G AW N++ N+TAFTTK++YG EREAQWA AQRT+HGLQ +E+ V E+ REL
Sbjct: 845 ILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETANVVPERGGYREL 904
Query: 904 NELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
+E+A QAKRRAE+ARLRELHTLKGHVESVVKLKGLDIET HYTV
Sbjct: 905 SEIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIETAG-HYTV 949
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3676 (1299.1 bits), Expect = 0., P = 0.
Identities = 717/947 (75%), Positives = 792/947 (83%)
Query: 6 LEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNXXXXXXXXXXXXFLG 65
LE+IKNE VDLE+IP+ EVF+QLKCT +GLTT EGE R+ IFG N FLG
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 66 FMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEEXXXXXXXXX 125
FMWNPLSWVMEAAA+MAI LANG +PPDW DFVGI+ LL INSTISFIEE
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 126 XXXXXXPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTG 185
PKTKVLRD KWSEQEA ILVPGDI+SIKLGDI+PADARLLEGDPLK+DQ+ALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 186 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 245
ESLPVTK+PG EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 246 GNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 305
GNFCICSIA+G+ IEI+VM+ IQ R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 306 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAA 365
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK+L+EVF KG + D +LL AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 366 RASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSK 425
ASRVENQDAIDA++VGMLADPKEARAGI EVHFLPFNPVDKRTA+TYIDS+G+WHR SK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 426 GAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLL 485
GAPEQI+DL + ++R+K ID +AERGLR+L V RQ VPEKTKES G PWEFVGLL
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 486 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKD 545
PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPS++LLG KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 546 ESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRXXXXX 605
+IAS+PVEELIEKADGFAGVFPEHKYEIVKKLQERKHI GMTGDGVNDAPALK+
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 606 XXXXXXXXXXXXXXXVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLV 665
VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+L+
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 663
Query: 666 ALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALV 725
AL+W+FDF FM+LIIAILNDGTIMTISKDRVKPSP PDSWKLKEIF TG+VLG Y A++
Sbjct: 664 ALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIM 723
Query: 726 TAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVERP 785
+ FFW H T FF++ F ++ I + D L A+YLQVSIISQALIFVTRSRSWSFVERP
Sbjct: 724 SVIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERP 783
Query: 786 GVMLVGAFLVAQLLATIIAVYAKWEFARIEXXXXXXXXXXXXFSIITYLPLDPLKFVIRY 845
G +L+ AF++AQL+AT+IAVYA W FA+++ +SI+TY P D LKF IRY
Sbjct: 784 GALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRY 843
Query: 846 AQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSESTVN---EKNSNRE 902
SGKAW +L N+TAFTTKKDYG GEREAQWA AQRT+HGLQ E VN EK S RE
Sbjct: 844 ILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKED-VNIFPEKGSYRE 902
Query: 903 LNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
L+E+AEQAKRRAE+ARLRELHTLKGHVESV KLKGLDI+T HYTV
Sbjct: 903 LSEIAEQAKRRAEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 949
|
|
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3648 (1289.2 bits), Expect = 0., P = 0.
Identities = 697/946 (73%), Positives = 793/946 (83%)
Query: 6 LEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNXXXXXXXXXXXXFLG 65
L+ IKNE+VDL RIP+ EVFE+LKCT +GLT E RL +FG N FLG
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 66 FMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEEXXXXXXXXX 125
FMWNPLSWVME AA+MAI LANGGG+PPDW DFVGIV LL INSTISFIEE
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 126 XXXXXXPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTG 185
PKTKVLRD +WSEQEA ILVPGD+ISIKLGDI+PADARLL+GDPLKIDQ++LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 186 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 245
ES+PVTKNP DEVFSGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ+GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 246 GNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 305
GNFCICSIA+G+ +E++VM+ IQRR YRDGIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 306 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAA 365
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKL+VDK+L+EVF KG + + L AA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 366 RASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSK 425
RASR+ENQDAIDA+IVGMLADPKEARAG+ EVHF PFNPVDKRTA+TY+DS+G+WHR SK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 426 GAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLL 485
GAPEQI++LC K ++RRK H +ID FAERGLR+L V RQ V EK K++ G PW+ VGLL
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 486 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKD 545
PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 546 ESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRXXXXX 605
S+ ++PV+ELIEKADGFAGVFPEHKYEIV +LQ+R HICGMTGDGVNDAPALK+
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 606 XXXXXXXXXXXXXXXVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLV 665
VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+ +
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 663
Query: 666 ALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALV 725
AL+W+FDF PFM+LIIAILNDGTIMTISKDR+KPSP PDSWKL++IF TGVVLG Y AL+
Sbjct: 664 ALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALM 723
Query: 726 TAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVERP 785
T FFW++ D+ FF+N F ++ + ++P+ + AALYLQVSIISQALIFVTRSRSWS+ E P
Sbjct: 724 TVVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFVTRSRSWSYAECP 783
Query: 786 GVMLVGAFLVAQLLATIIAVYAKWEFARIEXXXXXXXXXXXXFSIITYLPLDPLKFVIRY 845
G++L+GAF++AQL+AT IAVYA W FARIE +S +TY+PLD LKF IRY
Sbjct: 784 GLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRY 843
Query: 846 AQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSEST--VNEKNSNREL 903
SGKAW NLL+NKTAFTTKKDYGK EREAQWA AQRT+HGLQ +E NEKNS EL
Sbjct: 844 VLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNSYSEL 903
Query: 904 NELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
+++AEQAKRRAEV RLRE++TLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 904 SQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949
|
|
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3580 (1265.3 bits), Expect = 0., P = 0.
Identities = 694/956 (72%), Positives = 793/956 (82%)
Query: 1 MGDIS--LEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNXXXXXXXX 58
MGD LE + E VDLE +P+ EVFE L+C+ +GLTT ++RL +FG+N
Sbjct: 1 MGDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 59 XXXXFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEEXX 118
FLGFMWNPLSWVMEAAAIMAI LANGGGKPPDW DFVGI+ LL INSTISFIEE
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 119 XXXXXXXXXXXXXPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKI 178
PK KVLRD +W EQ+A ILVPGDIISIKLGDIVPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 180
Query: 179 DQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 238
DQ++LTGESLPVTK PGD V+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TN VGHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHF 240
Query: 239 QKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVT 298
Q+VLTAIGNFCICSIAVGM IEI+VM+ IQ R+YR GIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 299 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSD 358
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+LIEVF KG D+D
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 359 GLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNG 418
++L AA+ASR+ENQDAIDA+IVGMLADPKEARAG+ EVHFLPFNP DKRTA+TYIDS+G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDG 420
Query: 419 DWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSP 478
HR SKGAPEQI++L + E+ R+ H +ID FAERGLR+L V Q VPE TKES G P
Sbjct: 421 KMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 479 WEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSS 538
W+F+GL+PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+
Sbjct: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 539 LLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPAL 598
LLGQ KDESI ++P+++LIEKADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 599 KRXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRI 658
K+ VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 659 VLGFLLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVL 718
VLGF+L+AL+WKFDFPPFM+LIIAILNDGTIMTISKDRVKPSP+PDSWKL EIF TGVV
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVF 720
Query: 719 GTYMALVTAFFFWLIHDTRFFTNTFNL----KEIHEKPDMLSAALYLQVSIISQALIFVT 774
G+YMA++T FFW + T FF TF + K H+ L++A+YLQVSIISQALIFVT
Sbjct: 721 GSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVT 780
Query: 775 RSRSWSFVERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEXXXXXXXXXXXXFSIITYL 834
RSRSWS+VERPG++LV AF++AQL+AT+IAVYA W FA IE ++I+ Y+
Sbjct: 781 RSRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYI 840
Query: 835 PLDPLKFVIRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSESTV 894
PLD +KF+IRYA SG+AWD +++ + AFT +KD+GK +RE QWA AQRT+HGLQ ++ +
Sbjct: 841 PLDIIKFLIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKM 900
Query: 895 -NEKNSNRELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
E+ EL+++AE+AKRRAE+ARLRELHTLKGHVESVV+LKGLDIETIQQ YTV
Sbjct: 901 FPERTHFNELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956
|
|
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3573 (1262.8 bits), Expect = 0., P = 0.
Identities = 693/949 (73%), Positives = 791/949 (83%)
Query: 6 LEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNXXXXXXXXXXXXFLG 65
LE + E VDLE +P+ EVFE L+C+ +GLTT ++RL +FG+N FLG
Sbjct: 12 LEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKFLKFLG 71
Query: 66 FMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEEXXXXXXXXX 125
FMWNPLSWVMEAAAIMAI LANGGGKPPDW DFVGI+ LL INSTISFIEE
Sbjct: 72 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 131
Query: 126 XXXXXXPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTG 185
PK KVLRD +W EQ+A ILVPGDIISIKLGDIVPADARLLEGDPLKIDQ+ALTG
Sbjct: 132 LMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTG 191
Query: 186 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 245
ESLPVTK+ GD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ+GHFQ+VLTAI
Sbjct: 192 ESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHFQQVLTAI 251
Query: 246 GNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 305
GNFCICSIAVGM IEI+VM+ IQ R+YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 252 GNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 311
Query: 306 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAA 365
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+LIEVF+KG D+D ++L AA
Sbjct: 312 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAA 371
Query: 366 RASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSK 425
RASR+ENQDAIDA+IVGMLADPK+ARAGI EVHFLPFNP DKRTA+TYID+ G+ HR SK
Sbjct: 372 RASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSK 431
Query: 426 GAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLL 485
GAPEQI++L K E+ R+ H +ID FAERGLR+L V Q VPE K+S G PW+FVGL+
Sbjct: 432 GAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLM 491
Query: 486 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKD 545
PLFDPPRHDSAETIRRAL+LGV+VKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ+KD
Sbjct: 492 PLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKD 551
Query: 546 ESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRXXXXX 605
ESI ++PV+ELIEKADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPALK+
Sbjct: 552 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 611
Query: 606 XXXXXXXXXXXXXXXVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLV 665
VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+L+
Sbjct: 612 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 671
Query: 666 ALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALV 725
AL+W+FDFPPFM+LIIAILNDGTIMTISKDRVKPSP+PDSWKL EIF TGVV G+YMA++
Sbjct: 672 ALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMM 731
Query: 726 TAFFFWLIHDTRFFTNTFNL----KEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSF 781
T FFW+ + T FF TF + K H+ L++A+YLQVSIISQALIFVTRSRSWSF
Sbjct: 732 TVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSF 791
Query: 782 VERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEXXXXXXXXXXXXFSIITYLPLDPLKF 841
VERPG+ L+ AF++AQL+AT+IAVYA W FA IE ++II Y+PLD +KF
Sbjct: 792 VERPGIFLMIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKF 851
Query: 842 VIRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSESTV-NEKNSN 900
IRYA SG+AWD +++ + AFT +KD+GK +RE QWA AQRT+HGLQ ++ + ++
Sbjct: 852 FIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTKMFTDRTHV 911
Query: 901 RELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
ELN++AE+AKRRAE+ARLRELHTLKGHVESVV+LKGLDIETIQQ YTV
Sbjct: 912 SELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3303 (1167.8 bits), Expect = 0., P = 0.
Identities = 649/964 (67%), Positives = 758/964 (78%)
Query: 1 MGDI-SLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNXXXXXXXXX 59
M DI +L+ I E++DLE +PV EVF+ LKCT +GLT+ E ++RL +FGYN
Sbjct: 1 MTDIEALKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESK 60
Query: 60 XXXFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEEXXX 119
FLGFMWNPLSWVMEAAA+MAI LA+GGGKP D+ DFVGIVVLL INSTISF+EE
Sbjct: 61 ILKFLGFMWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLINSTISFVEENNA 120
Query: 120 XXXXXXXXXXXXPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKID 179
PK K +RD KW+E +A LVPGDI+SIKLGDI+PADARLLEGDPLKID
Sbjct: 121 GNAAAALMAQLAPKAKAVRDGKWNEIDAAELVPGDIVSIKLGDIIPADARLLEGDPLKID 180
Query: 180 QAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ 239
QA LTGESLPVTKNPG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST VGHFQ
Sbjct: 181 QATLTGESLPVTKNPGASVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTTHVGHFQ 240
Query: 240 KVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTM 299
KVLTAIGNFCICSIAVGM IEI+V++ +Q+R YR GIDNLLVLLIGGIPIAMPTVLSVTM
Sbjct: 241 KVLTAIGNFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTM 300
Query: 300 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDG 359
AIG+HRL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK+LIEVF +G D D
Sbjct: 301 AIGAHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFKRGIDRDM 360
Query: 360 LLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGD 419
+L AARA+R+ENQDAID +IV ML+DPKEARAGI E+HFLPF+P ++RTA+TY+D G
Sbjct: 361 AVLMAARAARLENQDAIDTAIVSMLSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGK 420
Query: 420 WHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPW 479
HR SKGAPE+I+D+ K E++ K H ID FAERGLR+LG+ Q VP+ + EG PW
Sbjct: 421 MHRVSKGAPEEILDMAHNKLEIKEKVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPW 480
Query: 480 EFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 539
+FV LLPLFDPPRHDSA+TI RAL LGV+VKMITGDQLAI KETGRRLGMGTNMYPSSSL
Sbjct: 481 DFVALLPLFDPPRHDSAQTIERALHLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSL 540
Query: 540 LGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 599
L + E ++ V+ELIE ADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPALK
Sbjct: 541 LSDNNTEGVS---VDELIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALK 597
Query: 600 RXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIV 659
+ VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 598 KADIGIAVDDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 657
Query: 660 LGFLLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLG 719
+GF+L+ + W+FDFPPFM+L+IAILNDGTIMTISKDRVKPSP PD WKLKEIF TGVVLG
Sbjct: 658 MGFMLLCVFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPSPTPDCWKLKEIFATGVVLG 717
Query: 720 TYMALVTAFFFWLIHDTRFFTNTF---NLKEIHEKP----------DMLSAALYLQVSII 766
Y+A++T FFW ++T FF N F N + H K + +++A+YLQVS I
Sbjct: 718 AYLAIMTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQMASAVYLQVSTI 777
Query: 767 SQALIFVTRSRSWSFVERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEXXXXXXXXXXX 826
SQALIFVTRSRSWSFVERPG +LV AFL+AQL+A++I+ A W FA I
Sbjct: 778 SQALIFVTRSRSWSFVERPGFLLVIAFLIAQLVASVISAMANWPFAGIRSIGWGWTGVIW 837
Query: 827 XFSIITYLPLDPLKFVIRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHG 886
F+I+TY+ LDP+KF++RYA SGK+WD +++ +TA T KK++G+ ER A WA +RT HG
Sbjct: 838 IFNIVTYMLLDPIKFLVRYALSGKSWDRMVEGRTALTGKKNFGQEERMAAWATEKRTQHG 897
Query: 887 LQTSESTVNEKNSNRELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQH 946
L+T + V E+NS ELN +AE+AKRRAE+AR+REL TLKG VES KLKG D+E +
Sbjct: 898 LETGQKPVYERNSATELNNMAEEAKRRAEIARMRELQTLKGKVESAAKLKGYDLEDPNSN 957
Query: 947 -YTV 949
YT+
Sbjct: 958 NYTI 961
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3133 (1107.9 bits), Expect = 0., P = 0.
Identities = 618/943 (65%), Positives = 726/943 (76%)
Query: 7 EEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNXXXXXXXXXXXXFLGF 66
+ + +DL +P+ EVFE L+ +P+GL + + E+RL+IFG N FLGF
Sbjct: 13 DTFNRKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEEKQENRFVKFLGF 72
Query: 67 MWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEEXXXXXXXXXX 126
MWNPLSWVMEAAA+MAI LAN PDW DF GIV LL IN+TISF EE
Sbjct: 73 MWNPLSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFEENNAGNAAAAL 132
Query: 127 XXXXXPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGE 186
KT+VLRD +W EQ+A ILVPGDIISIKLGDI+PADARLLEGDPLKIDQ+ LTGE
Sbjct: 133 MARLALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSVLTGE 192
Query: 187 SLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 246
SLPVTK G++VFSGSTCKQGEIEAVVIATG TFFGK A LVDST+ GHFQ+VLT+IG
Sbjct: 193 SLPVTKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTDVTGHFQQVLTSIG 252
Query: 247 NFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 306
NFCICSIAVGM +EII+M+ +Q RSYR GI+NLLVLLIGGIPIAMPTVLSVT+AIGSHRL
Sbjct: 253 NFCICSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRL 312
Query: 307 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAAR 366
SQQGAITKRMTAIEEMAGMDVLC DKTGTLTLN L+VDK+LIEVFV D D +LL A R
Sbjct: 313 SQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGR 372
Query: 367 ASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKG 426
ASR+ENQDAIDA+IV MLADP+EARA I E+HFLPFNPVDKRTAITYIDS+G W+R +KG
Sbjct: 373 ASRLENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKG 432
Query: 427 APEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLP 486
APEQ+++LC K E+ ++ + IID FAE+GLR+L V Q +PEK+ S G PW F GLLP
Sbjct: 433 APEQVLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLP 492
Query: 487 LFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDE 546
LFDPPRHDS ETI RAL LGV VKMITGDQLAI KETGRRLGMGTNMYPSSSLLG + DE
Sbjct: 493 LFDPPRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDE 552
Query: 547 SIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRXXXXXX 606
A +PV+ELIE ADGFAGVFPEHKYEIVK LQE KH+ GMTGDGVNDAPALK+
Sbjct: 553 HEA-IPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIA 611
Query: 607 XXXXXXXXXXXXXXVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVA 666
VLT+PGLSVI+SAVLTSRAIFQRM+NYT+YAVSITIRIVLGF L+A
Sbjct: 612 VADATDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVLGFTLLA 671
Query: 667 LLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALVT 726
L+W++DFPPFM+LIIAILNDGTIMTISKDRV+PSP P+SWKL +IF TG+V+GTY+ALVT
Sbjct: 672 LIWEYDFPPFMVLIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFATGIVIGTYLALVT 731
Query: 727 AFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVERPG 786
F+W+I T FF F++K I + +S+A+YLQVSIISQALIFVTRSR WSF ERPG
Sbjct: 732 VLFYWIIVSTTFFEKHFHVKSIANNSEQVSSAMYLQVSIISQALIFVTRSRGWSFFERPG 791
Query: 787 VMLVGAFLVAQLLATIIAVYAKWEFARIEXXXXXXXXXXXXFSIITYLPLDPLKFVIRYA 846
+L+ AF++AQL AT+IAVYA FA+I +S+I Y+PLD +KFV YA
Sbjct: 792 TLLIFAFILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYIPLDVIKFVFHYA 851
Query: 847 QSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQTSESTVNEKNSNRELNEL 906
SG+AW+ +L KTAFT KKDYGK + ++QR S S + S + +
Sbjct: 852 LSGEAWNLVLDRKTAFTYKKDYGKDDGSPNVTISQR-------SRSAEELRGSRSRASWI 904
Query: 907 AEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
AEQ +RRAE+ARL E+H++ H+ESV+KLK +D I+ +TV
Sbjct: 905 AEQTRRRAEIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P19456 | PMA2_ARATH | 3, ., 6, ., 3, ., 6 | 0.8280 | 0.9936 | 0.9947 | no | no |
| P49380 | PMA1_KLULA | 3, ., 6, ., 3, ., 6 | 0.3653 | 0.8672 | 0.9154 | yes | no |
| Q9LV11 | PMA11_ARATH | 3, ., 6, ., 3, ., 6 | 0.7834 | 1.0 | 0.9926 | no | no |
| P19657 | PMA2_YEAST | 3, ., 6, ., 3, ., 6 | 0.3808 | 0.8250 | 0.8268 | yes | no |
| Q03194 | PMA4_NICPL | 3, ., 6, ., 3, ., 6 | 0.8333 | 0.9968 | 0.9936 | N/A | no |
| Q58623 | Y1226_METJA | 3, ., 6, ., 3, ., - | 0.4093 | 0.8229 | 0.9701 | yes | no |
| Q43128 | PMA10_ARATH | 3, ., 6, ., 3, ., 6 | 0.7051 | 0.9852 | 0.9873 | no | no |
| Q08435 | PMA1_NICPL | 3, ., 6, ., 3, ., 6 | 0.7892 | 0.9947 | 0.9864 | N/A | no |
| Q08436 | PMA3_NICPL | 3, ., 6, ., 3, ., 6 | 0.7871 | 0.9947 | 0.9874 | N/A | no |
| P83970 | PMA1_WHEAT | 3, ., 6, ., 3, ., 6 | 0.8238 | 0.9947 | 0.9926 | N/A | no |
| Q42556 | PMA9_ARATH | 3, ., 6, ., 3, ., 6 | 0.8198 | 0.9978 | 0.9926 | no | no |
| Q9SH76 | PMA6_ARATH | 3, ., 6, ., 3, ., 6 | 0.8280 | 0.9978 | 0.9978 | no | no |
| Q9SJB3 | PMA5_ARATH | 3, ., 6, ., 3, ., 6 | 0.7938 | 0.9947 | 0.9947 | no | no |
| P09627 | PMA1_SCHPO | 3, ., 6, ., 3, ., 6 | 0.3815 | 0.8092 | 0.8356 | yes | no |
| P22180 | PMA1_SOLLC | 3, ., 6, ., 3, ., 6 | 0.7955 | 0.9947 | 0.9874 | N/A | no |
| Q9LY32 | PMA7_ARATH | 3, ., 6, ., 3, ., 6 | 0.7240 | 0.9968 | 0.9843 | no | no |
| Q9M2A0 | PMA8_ARATH | 3, ., 6, ., 3, ., 6 | 0.8479 | 0.9957 | 0.9968 | yes | no |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.7881 | 0.9947 | 0.9833 | no | no |
| Q7XPY2 | PMA1_ORYSJ | 3, ., 6, ., 3, ., 6 | 0.8175 | 0.9947 | 0.9926 | yes | no |
| P20431 | PMA3_ARATH | 3, ., 6, ., 3, ., 6 | 0.8202 | 0.9936 | 0.9936 | no | no |
| P20649 | PMA1_ARATH | 3, ., 6, ., 3, ., 6 | 0.8150 | 0.9947 | 0.9947 | no | no |
| P23980 | PMA2_SOLLC | 3, ., 6, ., 3, ., 6 | 0.7741 | 0.7365 | 0.9928 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 949 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-179 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-112 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 6e-88 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 4e-83 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 1e-73 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 7e-73 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-65 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 5e-64 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 2e-61 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 6e-58 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 7e-58 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-57 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 4e-47 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 7e-42 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 3e-37 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 3e-36 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 2e-31 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 6e-31 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 1e-29 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-25 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 2e-25 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 2e-24 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 6e-18 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 4e-17 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 4e-14 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 5e-13 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 4e-11 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 8e-10 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 1e-07 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 8e-07 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 3e-04 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 7e-04 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.001 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 0.002 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 1191 bits (3084), Expect = 0.0
Identities = 455/775 (58%), Positives = 556/775 (71%), Gaps = 23/775 (2%)
Query: 34 GLTTAEGEKRLQIFGYNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPP 93
GLT+AE +KRL +G N+L EKK S LLKFLGF WNPLSWVMEAAAI+AI L N
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALEN------ 54
Query: 94 DWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPG 153
W DFV I+ LL +N+TI FIEEN AGNA AL LAPK +VLRD KW E A LVPG
Sbjct: 55 -WVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPG 113
Query: 154 DIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVV 213
D++ +K+GDIVPAD RL EGD +++DQAALTGESLPVTK GD +SGST KQGE EAVV
Sbjct: 114 DVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVV 173
Query: 214 IATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSY 272
ATG++TFFGKAA LV ST GH QK+L+ IG F I I V + IE++V++ + S+
Sbjct: 174 TATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233
Query: 273 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 332
R+G+ LVLL+GGIPIAMP VLSVTMA+G+ L+++ AI R+TAIEE+AGMD+LCSDK
Sbjct: 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDK 293
Query: 333 TGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARA 392
TGTLTLNKLS+D+ L F G D D +LL AA ASR E+QDAID +++G D KEAR
Sbjct: 294 TGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARD 351
Query: 393 GITEVHFLPFNPVDKRTAITYIDS-NGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDN 451
G + F+PF+PVDKRT T D G + +KGAP+ I+DLC K E+ K + +D
Sbjct: 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDE 411
Query: 452 FAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKM 511
A RG RALGV R E W F+GLLPLFDPPRHD+ ETI RA LGV VKM
Sbjct: 412 LASRGYRALGVART--------DEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463
Query: 512 ITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHK 571
+TGD LAI KET RRLG+GTN+Y + LL + + S + E++E ADGFA VFPEHK
Sbjct: 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPS-GLGEMVEDADGFAEVFPEHK 522
Query: 572 YEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIV 631
YEIV+ LQ+R H+ GMTGDGVNDAPALK+AD+GIAVA ATDAARSA+DIVLTEPGLSVIV
Sbjct: 523 YEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIV 582
Query: 632 SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALLWKFDFPPFMILIIAILNDGTIMT 691
A+L SR IFQRMK+Y IY ++ TIRIV F L+ L+ F FPP M++IIAILNDGTIMT
Sbjct: 583 DAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMT 642
Query: 692 ISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALVTAFFFWLIHDTRFFTNTFNLKEIHEK 751
I+ D VKPS +P W L+E+F VLG Y+ + T + DT FF + F L+ +H
Sbjct: 643 IAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTTFFIDKFGLQLLHGN 702
Query: 752 PDMLSAALYLQVSIISQALIFVTRSRSWSFVERPGVMLVGAFLVAQLLATIIAVY 806
L + +YLQVSI A IFVTR+ + + ERPG +L GAF++AQ++AT IAVY
Sbjct: 703 ---LQSFIYLQVSISGHATIFVTRTHGFFWSERPGKLLFGAFVIAQIIATFIAVY 754
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 542 bits (1399), Expect = e-179
Identities = 269/902 (29%), Positives = 416/902 (46%), Gaps = 90/902 (9%)
Query: 17 ERIPVAEVFEQLKCTPK-GLTTAEGEKRLQIFGYNKL-EEKKESKLLKFLGFMWNPLSWV 74
+ E+ +L +P GL+ E ++RL+ +G N+L EEKK S L KFL +P +
Sbjct: 26 LSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIIL 85
Query: 75 MEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKT 134
+ AA+ + A G D + I++++ IN+ + F++E A A AL +PK
Sbjct: 86 LLVAAL---LSAFVGDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKA 142
Query: 135 KVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNP 194
KVLRD K+ E A LVPGDI+ ++ GD+VPAD RLLE L++D++ALTGESLPV K
Sbjct: 143 KVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQA 202
Query: 195 GDE--------------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV-GHFQ 239
+FSG+T G + +V+ATG T FGK A L+ + +V Q
Sbjct: 203 LPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQ 262
Query: 240 KVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNL----LVLLIGGIPIAMPTVL 295
+ L +G F + V + +++ + +G+ L L + +P +P V+
Sbjct: 263 RKLNKLGKF----LLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVV 318
Query: 296 SVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGT 355
++ +A+G+ R+++ AI + + AIE + +DV+CSDKTGTLT NK++V K I K
Sbjct: 319 TIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDI 378
Query: 356 DSDG---------LLLAAARASRVE--------NQDAIDASIV------GMLADPKEARA 392
D LLAAA + V D + ++V G D
Sbjct: 379 DDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEV 438
Query: 393 GITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLKG-------EMRRKA 445
+ +PF+ KR ++ G + KGAPE I++ C G E R
Sbjct: 439 EYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTL 498
Query: 446 HQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWE----FVGLLPLFDPPRHDSAETIRR 501
+ + A GLR L V + + K+ E E F+GL + DPPR D E I
Sbjct: 499 EEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEE 558
Query: 502 ALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEEL---IE 558
+ G+ V MITGD + + G+ + + G + ++ EEL +E
Sbjct: 559 LREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGA----ELDALSDEELAELVE 614
Query: 559 KADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVAD-ATDAARSA 617
+ FA V PE K IV+ LQ+ H+ MTGDGVNDAPALK AD+GIA+ TDAA+ A
Sbjct: 615 ELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEA 674
Query: 618 SDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALLWKFDFP--P 675
+DIVL + + IV AV+ R ++ +K + +Y +S + VL L+ +L F P P
Sbjct: 675 ADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTP 734
Query: 676 FMILIIAILNDGTI---MTISK---DRVKPSPMPDS---WKLKEIFGTGVVLGTYMALVT 726
+L I +L D + + D +K P + K + +++G A +
Sbjct: 735 LQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSA-IL 793
Query: 727 AFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRS---WSFVE 783
+L++ F NT L +L + + +I L RSR S +
Sbjct: 794 FILTFLLYLLGFIANTLGLDLFQA---LLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLL 850
Query: 784 RPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVI 843
L A LV +L +I + + W+ +I L L +
Sbjct: 851 FSNKYLWLALLVIIILQLLIIFLPPLNLKIFQ--PTPLSLFEWLIAIAVALLLLYIVVSE 908
Query: 844 RY 845
Y
Sbjct: 909 LY 910
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 355 bits (912), Expect = e-112
Identities = 178/603 (29%), Positives = 278/603 (46%), Gaps = 81/603 (13%)
Query: 101 IVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVL-RDEKWSEQEAEILVPGDIISIK 159
I+ L+ + + ++ A + +L L W E A+ LVPGD++ +K
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGWKEIPAKDLVPGDVVLVK 61
Query: 160 LGDIVPADARLLEGDPLKIDQAALTGESLPVTKNP----------GDEVFSGSTCKQGEI 209
G+ VPAD LL G +D++ LTGES PV K GD VF+G+ G +
Sbjct: 62 SGETVPADGVLLSGS-CFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGTL 120
Query: 210 EAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQ 268
VV TG+ T G+ A +V + Q + NF I + + + V +
Sbjct: 121 IVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIF--ILFLLLLALAVFLYLF 178
Query: 269 -----RRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 323
S + L++L+ +P A+P ++V +A+G RL+++G + + + A+EE+
Sbjct: 179 IRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELG 238
Query: 324 GMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGM 383
+D LCSDKTGTLT NK+++ V++ G D A + + D ++ +++
Sbjct: 239 KVDYLCSDKTGTLTKNKMTLQG----VYIDGGKEDNSSSLVACDNNYLSGDPMEKALLKS 294
Query: 384 LADPKEARAGITE---VHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLKGE 440
+A G E + PF+ V KR ++ +G KGAPE I++ C
Sbjct: 295 AELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCN---- 350
Query: 441 MRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIR 500
+ A +GLR L + + + EF+GL+ DP R D+ ETI
Sbjct: 351 ---NYEEKYLELARQGLRVLAFASKELED--------DLEFLGLITFEDPLRPDAKETIE 399
Query: 501 RALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKA 560
G+ V MITGD + K + LG+
Sbjct: 400 ELKAAGIKVVMITGDNVLTAKAIAKELGI------------------------------- 428
Query: 561 DGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDI 620
D FA V PE K +IV+ LQ++ HI MTGDGVNDAPALK+AD+GIA+ A++A+DI
Sbjct: 429 DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAADI 483
Query: 621 VLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALLWKFDFPPFMILI 680
VL + LS IV AV R IF +K+ +A++ + + L LL M+
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLIL---IPLALLLIVIILLLPMLAA 540
Query: 681 IAI 683
+A+
Sbjct: 541 LAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 300 bits (769), Expect = 6e-88
Identities = 222/795 (27%), Positives = 370/795 (46%), Gaps = 107/795 (13%)
Query: 19 IPVAEVFEQLKCTPK-GLTTA-EGEKRLQIFGYNKLE-EKKESKLLKFLG-FMWNPLSWV 74
+ V E +L+ + GL ++ E R G+N+ + E+ ES KFL F+ NPL +
Sbjct: 7 LSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILL 66
Query: 75 MEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKT 134
+ A+A++++ + N D V I + + I T+ F++E + + AL + P+
Sbjct: 67 LIASAVISVFMGN-------IDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPEC 119
Query: 135 KVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKN- 193
++R+ K A LVPGD++ + +GD VPAD R++E L ID++ LTGE+ PV+K
Sbjct: 120 HLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVT 179
Query: 194 -------PGD------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH-FQ 239
GD F G+ + G + +V+ TG +T FG ++ + + Q
Sbjct: 180 APIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQ 239
Query: 240 KVLTAIGN--FCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSV 297
K + +G + +G+ I ++ Q + + + + L + IP +P +++V
Sbjct: 240 KSMDLLGKQLSLVSFGVIGV---ICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTV 296
Query: 298 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK--------SLIE 349
T+A+G R+S++ AI +++ ++E + ++V+CSDKTGTLT N ++V K +++
Sbjct: 297 TLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLN 356
Query: 350 VF----VKGTDSDGLLLAAARASRVENQ---------------------DAIDASIVGML 384
DG +L V + D +++ +L
Sbjct: 357 AVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELL 416
Query: 385 A-----DPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTS-KGAPEQIIDLCG-- 436
D +E + EV PF+ K A+ + KGA EQ++ C
Sbjct: 417 MKFGLDDLRETYIRVAEV---PFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473
Query: 437 ---------LKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPL 487
L + R + A GLR + PEK + + F+GL+ +
Sbjct: 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASG--PEKGQLT------FLGLVGI 525
Query: 488 FDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDES 547
DPPR E + + GV + MITGD RRLGM S S+ G+ D
Sbjct: 526 NDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP--SKTSQSVSGEKLDA- 582
Query: 548 IASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAV 607
+ + +++ K FA PEHK +IVK LQ+R + MTGDGVNDAPALK ADIG+A+
Sbjct: 583 MDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM 642
Query: 608 AD-ATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVA 666
TD A+ A+D++LT+ + I+SA+ + IF +KN+ + +S ++ L + +A
Sbjct: 643 GQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSV-AALSLIALA 701
Query: 667 LLWKFDFP--PFMILIIAILNDGT------IMTISKDRVKPSPMP--DSWKLKEIFGTGV 716
L F P IL I IL DG + + KD ++ P P D K++ +
Sbjct: 702 TLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKIL 761
Query: 717 VLGTYMALVTAFFFW 731
V + + T F F
Sbjct: 762 VSAIIIVVGTLFVFV 776
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 286 bits (733), Expect = 4e-83
Identities = 201/736 (27%), Positives = 334/736 (45%), Gaps = 72/736 (9%)
Query: 24 VFEQLKCTPKGLTTAEGEKRLQIFGYNKL-EEKKESKLLKFLGFMWNPLSWVMEAAAIMA 82
+ +L GLT E +RL FG N+ EEKK L + NP +++ ++
Sbjct: 23 LLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVS 82
Query: 83 IVLANGGGKPPDWPDFVGIVVLLFINSTI-SFIEENNAGNAAAALMAGLAPKTKVLR--- 138
+ + I+ L+ + S + FI+E+ A AA AL + VLR
Sbjct: 83 YLTDDLEA--------TVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVIN 134
Query: 139 ---DEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPV----- 190
+ E + LVPGD+I + GDI+PADAR++ L I+Q+ALTGESLPV
Sbjct: 135 ENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVE 194
Query: 191 TKNPGDE--------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 242
K D F G+ G +AVV+ATG T+FG A F K +
Sbjct: 195 DKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAFDKGV 254
Query: 243 TAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLL---IGGIPIAMPTVLSVTM 299
++ I M + + V+ I D ++ L L +G P +P ++S +
Sbjct: 255 KSVSKLLI----RFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNL 310
Query: 300 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDG 359
A G+ +S++ I K ++AI+ MD+LC+DKTGTLT +K+ ++K + G S+
Sbjct: 311 AKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSER 367
Query: 360 LLLAAARASRVEN--QDAIDASIVGMLAD--PKEARAGITEVHFLPFNPVDKRTAITYID 415
+L A S + ++ +D +++ L + ++ + +V +PF+ +R ++ +
Sbjct: 368 VLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVEN 427
Query: 416 SNGDWHRTSKGAPEQIIDLC----------GLKGEMRRKAHQIIDNFAERGLRALGVGRQ 465
KGA E+++ +C L + + + +G+R + V +
Sbjct: 428 RAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATK 487
Query: 466 TVP------EKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAI 519
T+ KT E + G L DPP+ + E I G+NVK++TGD +
Sbjct: 488 TLKVGEADFTKTDEEQ---LIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIV 544
Query: 520 GKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQ 579
+ +G+ N + + + + DE +A + K FA + P K I+ L+
Sbjct: 545 TARICQEVGIDANDFLLGADIEELSDEELAR-----ELRKYHIFARLTPMQKSRIIGLLK 599
Query: 580 ERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRA 639
+ H G GDG+NDAPAL++AD+GI+V A D A+ ASDI+L E L V+ V+ R
Sbjct: 600 KAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRN 659
Query: 640 IFQRMKNYTIYAVSITIRIVLGFLLVALLWKFDFP--PFMILIIAILNDGTIMTISKDRV 697
F + Y S V L+ + F P +LI +L D + +T+ D++
Sbjct: 660 TFGNILKYLKMTASSNFGNVFSVLVASAFIPF-LPMLSLHLLIQNLLYDFSQLTLPWDKM 718
Query: 698 KPSPM--PDSWKLKEI 711
+ P W+ K +
Sbjct: 719 DREFLKKPHQWEQKGM 734
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 260 bits (667), Expect = 1e-73
Identities = 199/692 (28%), Positives = 315/692 (45%), Gaps = 94/692 (13%)
Query: 14 VDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLKFLGFMW----N 69
+ +P E+++ P+GL AE E + G N+L +K L W N
Sbjct: 47 LKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHL---WVCYRN 103
Query: 70 PLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAG 129
P + ++ ++ D I +++ I++ ++FI+E + AA AL A
Sbjct: 104 PFNILLTILGAISYATE-------DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAM 156
Query: 130 LAPKTKVLR------DEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAAL 183
++ VLR + W E + LVPGDII + GD++PAD R+L+ L + QA+L
Sbjct: 157 VSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASL 216
Query: 184 TGESLPVTKNPGDE-------------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 230
TGESLPV K F G+ G +AVVIATG +T+FG+ A V
Sbjct: 217 TGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVS 276
Query: 231 ST-NQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLL---IGG 286
++ FQ+ ++ + I M + V+ I + D + L L +G
Sbjct: 277 EQDSEPNAFQQGISRVSWLLI----RFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGL 332
Query: 287 IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKS 346
P +P +++ T+A G+ +LS+Q I KR+ AI+ MD+LC+DKTGTLT +K+ ++
Sbjct: 333 TPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLEN- 391
Query: 347 LIEVFVKGTDSD--------------GL--LLAAARASRVENQDAIDASIVGMLADPKEA 390
+ G S+ GL LL A V+ + A +
Sbjct: 392 --HTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLA---------SR 440
Query: 391 RAGITEVHFLPFNPVDKRTAITYIDSNGDWHR-TSKGAPEQIIDLCG----------LKG 439
I E+ PF+ +R ++ + N + H+ KGA E+I+++C L
Sbjct: 441 WQKIDEI---PFDFERRRMSVV-VAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDD 496
Query: 440 EMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWE----FVGLLPLFDPPRHDS 495
M R+ ++ D +GLR + V + +P + E G + DPP+ +
Sbjct: 497 IMLRRIKRVTDTLNRQGLRVVAVATKYLPA-REGDYQRADESDLILEGYIAFLDPPKETT 555
Query: 496 AETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEE 555
A ++ GV VK++TGD + + +G+ S + D+ +A
Sbjct: 556 APALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGEVLIGSDIETLSDDELA-----N 610
Query: 556 LIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAAR 615
L E+ FA + P HK IV L+ H+ G GDG+NDAPAL+ ADIGI+V A D AR
Sbjct: 611 LAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAR 670
Query: 616 SASDIVLTEPGLSVIVSAVLTSRAIFQRMKNY 647
A+DI+L E L V+ V+ R F M Y
Sbjct: 671 EAADIILLEKSLMVLEEGVIEGRRTFANMLKY 702
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 258 bits (661), Expect = 7e-73
Identities = 200/683 (29%), Positives = 313/683 (45%), Gaps = 78/683 (11%)
Query: 20 PVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKL-EEKKESKLLKFLGFMWNPLSWV-MEA 77
+ E L +GLT + +RLQ +G N++ EK L++ L NP +V M
Sbjct: 31 SLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVL 90
Query: 78 AAI---MAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKT 134
AAI L G+ D + I+ ++ ++ + F +E + AA AL A +
Sbjct: 91 AAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTA 150
Query: 135 KVLRDEKWSEQEA--EI----LVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESL 188
VLR + EI LVPGDI+ + GD++PAD RL+E L I QA LTGE+L
Sbjct: 151 TVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEAL 210
Query: 189 PVTK--------------NPGDEV---------FSGSTCKQGEIEAVVIATGVHTFFGKA 225
PV K DE F G+ G AVV+ATG T+FG
Sbjct: 211 PVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSL 270
Query: 226 AHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLL-- 283
A + T F + + ++ I M + + V+ I + D ++ LL L
Sbjct: 271 AKSIVGTRAQTAFDRGVNSVSWLLI----RFMLVMVPVVLLINGFTKGDWLEALLFALAV 326
Query: 284 -IGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLS 342
+G P +P ++S +A G+ ++++ + KR+ AI+ MDVLC+DKTGTLT
Sbjct: 327 AVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQ---- 382
Query: 343 VDKSLIE--VFVKGTDSDGLLLAAARASRVEN--QDAIDASIV--GMLADPKEARAGITE 396
D+ ++E + V G + +L A S ++ ++ +D ++V AG +
Sbjct: 383 -DRIILEHHLDVSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRK 441
Query: 397 VHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCG----------LKGEMRRKAH 446
V LPF+ V +R ++ D+ G KGA E+++ + L R +
Sbjct: 442 VDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLL 501
Query: 447 QIIDNFAERGLRALGVGRQTVPE---KTKESEGSPWEFV--GLLPLFDPPRHDSAETIRR 501
+ + + G R L V + +P + + S + V G L DPP+ +A I
Sbjct: 502 ALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAA 561
Query: 502 ALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEEL---IE 558
+ GV VK++TGD + + R +G+ P LLG I +M L +E
Sbjct: 562 LRENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLGTE----IEAMDDAALAREVE 613
Query: 559 KADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSAS 618
+ FA + P K ++K LQ H G GDG+NDAPAL+ AD+GI+V D A+ ++
Sbjct: 614 ERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKESA 673
Query: 619 DIVLTEPGLSVIVSAVLTSRAIF 641
DI+L E L V+ V+ R F
Sbjct: 674 DIILLEKSLMVLEEGVIKGRETF 696
|
Length = 903 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 234 bits (598), Expect = 2e-65
Identities = 163/605 (26%), Positives = 249/605 (41%), Gaps = 86/605 (14%)
Query: 78 AAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTIS-FIEE---NNAGNAAAALMAGLAPK 133
A I A + P + + +++ + ++E A A AL+ LAPK
Sbjct: 156 ATIGAYAYSLYATLFPVYFE-EAAMLIFLF--LLGRYLEARAKGRARRAIRALLD-LAPK 211
Query: 134 T--KVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVT 191
T V D + E E + GDI+ ++ G+ +P D ++ G +D++ LTGESLPV
Sbjct: 212 TATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS-VDESMLTGESLPVE 270
Query: 192 KNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQVGHFQKVLTAI-GNFC 249
K PGDEVF+G+ G + V G T + LV ++ + Q++ + F
Sbjct: 271 KKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFV 330
Query: 250 ICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLS 307
+ + + + + + L +L+ P A+ L+ AI G R +
Sbjct: 331 PVVLVIA-ALTFALWPLFGGGDWETALYRALAVLVIACPCAL--GLATPTAILVGIGRAA 387
Query: 308 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLL-LAAAR 366
++G + K A+E +A +D + DKTGTLT K V +V D D LL LAAA
Sbjct: 388 RRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEV----TDVVALDGDEDELLALAAAL 443
Query: 367 ASRVENQDAIDASIVGMLADPKEARA-GITEVHFLPFNPVDKRTAITYIDSNGDWHRTSK 425
E+ + +IV K A G+ +V F + R +D R
Sbjct: 444 EQHSEH--PLAKAIV------KAAAERGLPDVE--DFEEIPGRGVEAEVDG----ERVLV 489
Query: 426 GAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLL 485
G L G +G + I+ G + V +G + VG++
Sbjct: 490 GNAR----LLGEEGIDLPLLSERIEALESEGKTVVFVAV----------DG---KLVGVI 532
Query: 486 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKD 545
L D R D+ E I LG+ V M+TGD + + LG
Sbjct: 533 ALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELG----------------- 575
Query: 546 ESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGI 605
I++ A + PE K EIV++LQ M GDG+NDAPAL AD+GI
Sbjct: 576 -----------IDEV--RAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGI 622
Query: 606 AVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMK-NYTIYAVSITIRIVLGFLL 664
A+ TD A A+D+VL LS + A+ SRA + +K N I I L
Sbjct: 623 AMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682
Query: 665 VALLW 669
+ W
Sbjct: 683 LLTPW 687
|
Length = 713 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 233 bits (596), Expect = 5e-64
Identities = 185/733 (25%), Positives = 312/733 (42%), Gaps = 96/733 (13%)
Query: 24 VFEQLKCTPKG---LTTAEGEKRLQIFGYNKLEEKKESKLLKFLGFMWNPLSWVM----E 76
+ +LK L+++ E+R +++G N+L EK FL +W LS
Sbjct: 48 IATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPP---KSFLQIVWAALSDQTLILLS 104
Query: 77 AAAIMAIVLA------NGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALM-AG 129
AA++++VL W + V I+V + + ++ + + L
Sbjct: 105 VAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREK 164
Query: 130 LAPKTKVLRDEKWSEQEAEI--LVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGES 187
A K V+R EQ+ I +V GDI+S+ GD+VPAD + G L+ID++++TGES
Sbjct: 165 SAQKIAVIRGG--QEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGES 222
Query: 188 LPVTKNPGDEVF--SGSTCKQGEIEAVVIATGVHTFFGKAAHLV-----DSTNQVGHFQK 240
P+ K P + F SG+ +G +V A GV++F GK + DST +
Sbjct: 223 DPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSE 282
Query: 241 VLTAIGNFCICSIAVGMFIEIIVMWAIQR-----RSYRDGIDNLLVLLIGGIPI---AMP 292
+ IG F AV +F+ + + + + R + L I + I A+P
Sbjct: 283 LAGLIGKFG-MGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVP 341
Query: 293 TV--LSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLI 348
L+VT+A+ ++ + + + + A E M +CSDKTGTLT N +SV + I
Sbjct: 342 EGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYI 401
Query: 349 -EVFVKGTDSDGLLLAAARASRVEN------------------------QDAIDASIVGM 383
E D + R VE + A+ + +
Sbjct: 402 GEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLDFGLLL 461
Query: 384 LADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLK----G 439
L D +E RA V PFN K ++ S G + KGA E ++ C + G
Sbjct: 462 LRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNG 521
Query: 440 EMR-----RKAH--QIIDNFAERGLRALGVGRQTVPEKT---KESEGSPWEFVGLLPLFD 489
E K +I+ A LR + + + + K+ +G++ + D
Sbjct: 522 EATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKD 581
Query: 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIA 549
P R E ++ G+ V+M+TGD + K R G+ T + + S+
Sbjct: 582 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILT---FGGLAMEGKEFRSLV 638
Query: 550 SMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVAD 609
++ ++ K A P K +V L++ + +TGDG NDAPALK AD+G ++
Sbjct: 639 YEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGI 698
Query: 610 A-TDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNY-----TIYAVSITIRIVLGFL 663
+ T+ A+ ASDI+L + + IV AV R ++ ++ + T+ V++ + V +
Sbjct: 699 SGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCI 758
Query: 664 -------LVALLW 669
V LLW
Sbjct: 759 SSTSPLTAVQLLW 771
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 219 bits (559), Expect = 2e-61
Identities = 147/586 (25%), Positives = 243/586 (41%), Gaps = 88/586 (15%)
Query: 101 IVVLLFINSTISFIEENNAGNAAAAL--MAGLAPKTKVLRDEKWSEQEAEI--LVPGDII 156
+LLF+ +EE G A+ AL + LAP T + SE+E + L GDI+
Sbjct: 21 GALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIV 80
Query: 157 SIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIAT 216
++ G+ +P D ++ G+ +D++ALTGES+PV K GDEVF+G+ G + V
Sbjct: 81 IVRPGERIPVDGVVISGESE-VDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKL 139
Query: 217 GVHTFFGKAAHLV-DSTNQVGHFQKVLTAIG------NFCICSIAVGMFIEIIVMWAIQR 269
G + + LV ++ + Q++ I I + +++ + + A+ R
Sbjct: 140 GEDSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGALGALYR 199
Query: 270 RSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDV 327
L +L+ P A+ L+ +AI +++G + K A+E++A +
Sbjct: 200 ---------ALAVLVVACPCAL--GLATPVAILVAIGVAARRGILIKGGDALEKLAKVKT 248
Query: 328 LCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADP 387
+ DKTGTLT K +V IE + S+ LLA A A + + +IV
Sbjct: 249 VVFDKTGTLTTGKPTVVD--IEPLDDASISEEELLALAAALEQSSSHPLARAIV------ 300
Query: 388 KEARAGITEVHFLPFNPVDKRTAITY--IDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKA 445
+ A+ L + + +++ D + L E +
Sbjct: 301 RYAKK-----RGLELPKQEDVEEVPGKGVEATVDGGEEVRIGNP---RFLELAIEPISAS 352
Query: 446 HQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDL 505
+++ +G + V E +G++ L D R ++ E I
Sbjct: 353 PDLLNEGESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAIAALKRA 399
Query: 506 GV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFA 564
G + M+TGD + + LG+ DE A
Sbjct: 400 GGIKLVMLTGDNRSAAEAVAAELGI---------------DEV---------------HA 429
Query: 565 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTE 624
+ PE K IVK+LQE + M GDG+NDAPAL AD+GIA+ +D A A+DIVL
Sbjct: 430 ELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLN 489
Query: 625 PGLSVIVSAVLTSRAIFQRMK-NYTIYAVSITIRIVLGFLLVALLW 669
LS + +A+ SR + +K N + I L + LW
Sbjct: 490 DDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLW 535
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 215 bits (550), Expect = 6e-58
Identities = 191/804 (23%), Positives = 345/804 (42%), Gaps = 138/804 (17%)
Query: 6 LEEIKNE-NVDLERIPVAEVFEQLKCTP-KGLTTAEGEKRLQIFGYNKLEEKKES-KLLK 62
L+E+K E +D ++ + E+ + KGL+ A + L G N L + + +K
Sbjct: 6 LDELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVK 65
Query: 63 FLGFMWNPLSWVMEAAAIMAIVL----ANGGGKPPDWPDFVGIV--VLLFINSTISFIEE 116
F ++ S ++ AI+ + A+ +P + ++G+V ++ I S+ +E
Sbjct: 66 FCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQE 125
Query: 117 NNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPL 176
+ + + + V+RD + AE +V GD++ +K GD +PAD R++
Sbjct: 126 AKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGC 185
Query: 177 KIDQAALTGESLPVTKNPG----------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAA 226
K+D ++LTGES P T++P + F + C +G +V+ TG T G+ A
Sbjct: 186 KVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIA 245
Query: 227 HLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDN 278
L ++ HF ++T + F + V FI +++ ++ + +
Sbjct: 246 SLASGLENGKTPIAIEIEHFIHIITGVAVF----LGVSFFILSLIL----GYTWLEAVIF 297
Query: 279 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 338
L+ +++ +P + ++V + + + R++++ + K + A+E + +CSDKTGTLT
Sbjct: 298 LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 357
Query: 339 NKLSV-----DKSLIE----------VFVKGTDS-DGLLLAAARASRVE---NQDAI--- 376
N+++V D + E F K + + L A +R Q+ +
Sbjct: 358 NRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPIL 417
Query: 377 ------DASIVGML-------ADPKEARAGITEVHFLPFNPVDK-RTAI-TYIDSNGDWH 421
DAS +L E R +V +PFN +K + +I D H
Sbjct: 418 KRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRH 477
Query: 422 -RTSKGAPEQIIDLCG----------LKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEK 470
KGAPE+I++ C L E++ G R LG +P++
Sbjct: 478 LLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDE 537
Query: 471 T--------KESEGSPWE---FVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAI 519
+ P + FVGL+ + DPPR + + + G+ V M+TGD
Sbjct: 538 QFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 597
Query: 520 GKETGRRLGMGTNMYPSSSLLGQSKDESIA---SMPVEELIEKADG-------------- 562
K + +G+ + G E IA ++PV ++ +
Sbjct: 598 AKAIAKGVGIISE--------GNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTS 649
Query: 563 --------------FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVA 608
FA P+ K IV+ Q + I +TGDGVND+PALK+ADIG+A+
Sbjct: 650 EQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMG 709
Query: 609 DA-TDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVAL 667
A +D ++ A+D++L + + IV+ V R IF +K Y ++ I + FL+ +
Sbjct: 710 IAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFII 769
Query: 668 LWKFDFP-PFMILIIAILNDGTIM 690
+ P P + I ++ GT M
Sbjct: 770 ---ANIPLPLGTITILCIDLGTDM 790
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 197 bits (504), Expect = 7e-58
Identities = 79/223 (35%), Positives = 130/223 (58%), Gaps = 4/223 (1%)
Query: 101 IVVLLFINSTISFIEENNAGNAAAALMAGLAPK-TKVLRDEKWSEQEAEILVPGDIISIK 159
I++L+ IN+ + +E A A AL L P V+RD K E A+ LV GDI+ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 160 LGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVH 219
GD VPAD R++EG L++D++ALTGESLPV K+ GD VF+G+ GE++ +V ATG
Sbjct: 62 PGDRVPADGRIIEGS-LEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGED 120
Query: 220 TFFGKAAHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDN 278
T GK A LV+ Q++L + + I + + I + ++W + + + +
Sbjct: 121 TELGKIARLVEEAKSAKTPLQRLLDKLAKI-LVPIVLALAILVFLIWFFRGGDFLEALLR 179
Query: 279 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 321
L +L+ P A+P + + +A+G+ RL+++G + K ++A+E
Sbjct: 180 ALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 207 bits (530), Expect = 2e-57
Identities = 155/621 (24%), Positives = 255/621 (41%), Gaps = 110/621 (17%)
Query: 71 LSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAAL--MA 128
+++ A++A G + F +L+ ++E G A+ AL +A
Sbjct: 30 VAYGYSLVALLA-NQVLTGLHVHTF--FDASAMLITFILLGRWLEMLAKGRASDALSKLA 86
Query: 129 GLAPKT--KVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGE 186
L P T + D + E E+L PGDI+ + G+ +P D ++EG+ ++D++ +TGE
Sbjct: 87 KLQPSTATLLTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGES-EVDESLVTGE 145
Query: 187 SLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ------------ 234
SLPV K GD V +G+ G + ATG T + LV Q
Sbjct: 146 SLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKV 205
Query: 235 VGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIG---GIPIAM 291
G+F V+ AI + + + + + ++A++ + VL+I + +A
Sbjct: 206 AGYFVPVVIAIA---LITFVIWLILGADFVFALEV--------AVTVLIIACPCALGLAT 254
Query: 292 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVF 351
PTV+ A+ + ++ G + K A+E A +D + DKTGTLT K +V +V
Sbjct: 255 PTVI----AVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTV----TDVH 306
Query: 352 VKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAI 411
V G LLA A A ++ + +IV D + I
Sbjct: 307 VFGESDRDELLALAAALEAGSEHPLAKAIVSYA----------KAKGITLSQVSDFKA-I 355
Query: 412 TYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKT 471
I G T +G Q+ G + + + + G T
Sbjct: 356 PGIGVEG----TVEGHTIQL----GNEKLLGENGLKTD--------GEVEEGGGTTS-VL 398
Query: 472 KESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGT 531
G E G+L L D + ++ E I+ G+ M+TGD K + LG
Sbjct: 399 VAVNG---ELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELG--- 452
Query: 532 NMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDG 591
IE + A V P+ K ++KKLQE+ + M GDG
Sbjct: 453 -------------------------IE--NVRAEVLPDDKAALIKKLQEKGKVVAMVGDG 485
Query: 592 VNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKN----- 646
+NDAPAL +AD+GIA+ TD A A+D+VL L+ + +A+ SR +R+K
Sbjct: 486 INDAPALAQADVGIAIGAGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLWA 545
Query: 647 --YTIYAVSITIRIVLGFLLV 665
Y + A+ I ++ ++
Sbjct: 546 FGYNVIAIPIAAGVLYPAGIL 566
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 176 bits (449), Expect = 4e-47
Identities = 159/595 (26%), Positives = 233/595 (39%), Gaps = 129/595 (21%)
Query: 102 VVLLFINSTISFIEENNAGNAA---AALMAGLAPKT-KVLRDEKWSEQEAEILVPGDIIS 157
+LL + S +EE +G A ALM LAP T +VLR E E L GD++
Sbjct: 22 ALLLLLFSIGETLEEYASGRARRALKALME-LAPDTARVLRGGSLEEVAVEELKVGDVVV 80
Query: 158 IKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATG 217
+K G+ VP D +L G +D++ALTGES+PV K PGDEVF+G+ G + VV
Sbjct: 81 VKPGERVPVDGVVLSGTST-VDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLP 139
Query: 218 VHTFFGKAAHLV-DSTNQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGI 276
+ K +LV ++ ++ Q+ + + + +V ++R +
Sbjct: 140 ADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKRWP--FWV 197
Query: 277 DNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 334
LVLL+ P A+ V+S A ++ G + K A+E +A + + DKTG
Sbjct: 198 YRALVLLVVASPCAL--VISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTG 255
Query: 335 TLTLNKLSV-DKSLIEVFVKGTDSDGLLLAAARASRVENQDAI-DASIVGMLADPKEAR- 391
TLT + V D EV L AA +AS AI D + + E
Sbjct: 256 TLTTGRPKVVDVVPAEVL-------RLAAAAEQASSHPLARAIVDYARKRENVESVEEVP 308
Query: 392 -AGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAP--------------EQIIDLCG 436
G+ V VD N + GA +
Sbjct: 309 GEGVRAV-------VDGGEVRI---GNPRSLEAAVGARPESAGKTIVHVARDGTYLGYIL 358
Query: 437 LKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSA 496
L E R A + I L+ALG+ +
Sbjct: 359 LSDEPRPDAAEAI-----AELKALGIEKVV------------------------------ 383
Query: 497 ETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEEL 556
M+TGD+ A+ + R LG+ DE A +
Sbjct: 384 --------------MLTGDRRAVAERVARELGI---------------DEVHAEL----- 409
Query: 557 IEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAV-ADATDAAR 615
PE K EIVK+L+E+ M GDG+NDAPAL AD+GIA+ A +D A
Sbjct: 410 ----------LPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAI 459
Query: 616 SASDIVLTEPGLSVIVSAVLTSRAIFQRMK-NYTIYAVSITIRIVLGFLLVALLW 669
+D+VL LS + A+ +R + +K N I I + I+L V LW
Sbjct: 460 ETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGVLPLW 514
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 165 bits (420), Expect = 7e-42
Identities = 106/349 (30%), Positives = 157/349 (44%), Gaps = 49/349 (14%)
Query: 424 SKGAPEQIIDLCG-----------LKGEMRRKAHQIIDNFAER-GLRALGVGRQTVPEKT 471
KGAPE +++ C L +M+ +I LR L + + +P+
Sbjct: 449 VKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPR 508
Query: 472 KESEG----------SPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGK 521
+E S F+G++ + DPPR + A+ I + G+ V MITGD +
Sbjct: 509 EEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAE 568
Query: 522 ETGRRLGMGTNMYPSSSLLGQS-KDESIASMPVEELIEKADG---FAGVFPEHKYEIVKK 577
RR+G+ P + +S M + F+ V P HK E+V+
Sbjct: 569 AICRRIGI---FSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVEL 625
Query: 578 LQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTS 637
LQE+ I MTGDGVNDAPALK+ADIGIA+ T+ A+ ASD+VL + + IV+AV
Sbjct: 626 LQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEG 685
Query: 638 RAIFQRMKNYTIYAVSITIRIVLGFLLVALLWKFD-FPPFMILIIAILNDG--------- 687
RAI+ MK + Y +S I V+ L A L + P +L + ++ DG
Sbjct: 686 RAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFN 745
Query: 688 ----TIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALVTAF-FFW 731
IM R P+ W +F +V+G Y+ L T F W
Sbjct: 746 PPDKDIMWKPPRRPD-EPLITGW----LFFRYLVVGVYVGLATVGGFVW 789
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 151 bits (382), Expect = 3e-37
Identities = 94/295 (31%), Positives = 151/295 (51%), Gaps = 26/295 (8%)
Query: 77 AAAIMAIVLANGGGKPPDWPDFVGIVVLLFI---NSTISFIEENNAGNAAAALMAGLAPK 133
AA ++ VLA FV V+L I N+ + +E NA A AL +
Sbjct: 15 LAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEH 74
Query: 134 TKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKN 193
KVLRD +WS +A+ LVPGDI+ + +GD VPAD R+L L++DQ+ LTGES+ V K+
Sbjct: 75 AKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKH 134
Query: 194 ----PGDE---------VFSGSTCKQGEIEAVVIATGVHTFFGK-AAHLVDSTNQVGHFQ 239
P + +FSG+ G+ VV+ TG+ T GK + + + Q
Sbjct: 135 TESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQ 194
Query: 240 KVLTAIGNF---CICSIAVGMFIEIIVMW---AIQRRSYRDGIDNLLV---LLIGGIPIA 290
K L G I I + +++ I + A+ + I + L + IP
Sbjct: 195 KKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEG 254
Query: 291 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK 345
+P V++ +A+G+ +++++ AI +++ ++E + V+CSDKTGTLT N++SV K
Sbjct: 255 LPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCK 309
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 3e-36
Identities = 179/835 (21%), Positives = 292/835 (34%), Gaps = 234/835 (28%)
Query: 136 VLRDEKWSEQEAEILVPGDIISIKL--GDIVPADARLLEGDPLKIDQAALTGESLPVTKN 193
V+R+ KW ++ LVPGDI+SI +P D+ LL G + ++++ LTGES+PV K
Sbjct: 233 VIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCI-VNESMLTGESVPVLKF 291
Query: 194 P------GDEV------------FSG-------STCKQGEIEAVVIATGVHTFFGKAAHL 228
P DE F G A+V+ TG T G+ L
Sbjct: 292 PIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQ---L 348
Query: 229 VDS-----------TNQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGID 277
V S F L + II + R + +
Sbjct: 349 VRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYT-------IIELIKDGRPLGKIILR 401
Query: 278 NLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 337
+L ++ I +P A+P LS+ + RL ++G I +DV C DKTGTLT
Sbjct: 402 SLDIITIV-VPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLT 460
Query: 338 LNKLSVD----KSLIEVFVKGTDSDGLL--------LAAARA-SRVENQ----------- 373
+ L + S + F+K D L LA + +++E +
Sbjct: 461 EDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMF 520
Query: 374 -------DAIDAS------IVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDW 420
+ D S + + D I + F+ +R ++ ++
Sbjct: 521 EATGWTLEEDDESAEPTSILAVVRTDDPPQELSI--IRRFQFSSALQRMSVIVSTNDERS 578
Query: 421 HRT-SKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKT-------- 471
KGAPE I LC + +++ ++ G R L + + +P+ T
Sbjct: 579 PDAFVKGAPETIQSLCS-PETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLS 637
Query: 472 KESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQL----AIGKETG--- 524
+++ S F+G + +P + D+ E I+ + MITGD + +E G
Sbjct: 638 RDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVN 697
Query: 525 --RRLGMGTNMYPSSSLLGQSK-----DESIASMPVE----------------------- 554
L + P S Q K AS VE
Sbjct: 698 PSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMS 757
Query: 555 ----------------ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPAL 598
L+ FA + P+ K +V+ LQ+ + GM GDG ND AL
Sbjct: 758 GKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGAL 817
Query: 599 KRADIGIAV--ADATDAARSASDIVLTEPGLSVIV---SAVLTSRAIFQRMKNYT-IYAV 652
K+AD+GI++ A+A+ AA S + +VI A++TS +F+ M Y+ I
Sbjct: 818 KQADVGISLSEAEASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFY 877
Query: 653 SITIRIVLGFLLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIF 712
S++I + LI + L DG +TI
Sbjct: 878 SVSI--------------------LYLIGSNLGDGQFLTID------------------- 898
Query: 713 GTGVVLGTYMALVTAFFFWLIHDTRFFTNTFNLKEI-HEKPDMLSAALYLQVSIISQ-AL 770
+ L+ + LK++ E+P ++Y+ S++ Q L
Sbjct: 899 ---------LLLIFPVAL-------LMSRNKPLKKLSKERPPSNLFSVYILTSVLIQFVL 942
Query: 771 IFV--------TRSRSWSFVERPGVMLV---------GAFLVA--QLLATIIAVY 806
+ ++ W E P + F V+ Q L T I
Sbjct: 943 HILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLFFVSSFQYLITAIVNS 997
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 2e-31
Identities = 105/404 (25%), Positives = 175/404 (43%), Gaps = 61/404 (15%)
Query: 348 IEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDK 407
I VF K D L A + + + K A + PF+ K
Sbjct: 482 IHVFAKKFD---LPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIK 538
Query: 408 RTAITYIDSNGDWHRT-SKGAPEQIIDLC----GLKGEM--------RRKAHQIIDNFAE 454
R A Y D++G+ + +KGA E+II+ C G G R +++ A
Sbjct: 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAA 598
Query: 455 RGLRALGVG---------------RQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETI 499
GLR L +T+ T ES+ EF+GL+ ++DPPR++SA +
Sbjct: 599 EGLRVLAFASKSFDKADNNDDQLKNETLNRATAESD---LEFLGLIGIYDPPRNESAGAV 655
Query: 500 RRALDLGVNVKMITGDQLAIGKETGRRLG-MGTNMYPSS-----------SLLGQSKDES 547
+ G+NV M+TGD K + +G + N S DE
Sbjct: 656 EKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEE 715
Query: 548 IASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAV 607
+ + L+ A P+ K ++++ L RK C MTGDGVND+P+LK A++GIA+
Sbjct: 716 VDDLKALCLV-----IARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM 770
Query: 608 A-DATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVA 666
+ +D A+ ASDIVL++ + I++A+ R +F + + ++ ++ + + L++
Sbjct: 771 GINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAI-LLIIG 829
Query: 667 LLWK-------FDFPPFMIL-IIAILNDGTIMTISKDRVKPSPM 702
L ++ F P IL I I + M + ++ P M
Sbjct: 830 LAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLM 873
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 6e-31
Identities = 102/361 (28%), Positives = 160/361 (44%), Gaps = 60/361 (16%)
Query: 32 PKGLTTAEGEKRLQIFGYNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIVLANGGGK 91
P+GLT E + RL+ G N+LE L L V A ++ I+ A
Sbjct: 24 PEGLTHDEAQHRLKEVGENRLEADSGIDAKAML------LHQVCNAMCMVLIIAAAISFA 77
Query: 92 PPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILV 151
DW + I ++ +N I FI+E A +L +P V+R+ K ++ LV
Sbjct: 78 MHDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLV 137
Query: 152 PGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNP------------GDEV- 198
PGDI +K GD +PAD RL+E D+A LTGESLPV K+ GD +
Sbjct: 138 PGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRIN 197
Query: 199 --FSGSTCKQGEIEAVVIATGVHTFFGKAA---------------------------HLV 229
FS S +G + + IAT +++ G A L
Sbjct: 198 LAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILK 257
Query: 230 DSTNQVGHF---------QKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLL 280
+ G F + L+ + C + + IIVM A + ++ +
Sbjct: 258 VTKKVTGAFLGLNVGTPLHRKLSKLAVILFC---IAIIFAIIVMAAHKFDVDKEVAIYAI 314
Query: 281 VLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK 340
L I IP ++ VLS+TMA+G+ +S++ I +++ A+E + ++ +CSDKTGT+T K
Sbjct: 315 CLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGK 374
Query: 341 L 341
+
Sbjct: 375 M 375
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 1e-29
Identities = 143/579 (24%), Positives = 233/579 (40%), Gaps = 88/579 (15%)
Query: 69 NPLSWVMEAAAIMAIVL---ANGGGKPPDWPDFVG-IVVLLFINSTISFIEENNA---GN 121
NP+ +V+E +I+ L + G F I ++L+ + E A G
Sbjct: 32 NPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGK 91
Query: 122 AAAALMAGLAPKT--KVLRDE-KWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKI 178
A A + +T ++LR + A L GDI+ ++ G+I+P+D ++EG +
Sbjct: 92 AQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SV 150
Query: 179 DQAALTGESLPVTKNPG---DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV 235
D++A+TGES PV + G V G+ ++ + A TF + LV+ +
Sbjct: 151 DESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAER- 209
Query: 236 GHFQKVLTAIGNFCICSIAVGMFIEIIV-MWAIQRRSYRDGID--NLLVLLIGGIPIAMP 292
QK I + S +F+ + ++ S L+ LL+ IP +
Sbjct: 210 ---QKTPNEIALTILLSGLTLIFLLAVATLYPFAIYSGGGAASVTVLVALLVCLIPTTIG 266
Query: 293 TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLSVDKSLIEVF 351
+LS G R++Q I A+E +D L DKTGT+TL N+ + + I
Sbjct: 267 GLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE--FIP-- 322
Query: 352 VKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVH----FLPFNPVDK 407
V G + L AA AS + ++ SIV LA ++ F+PF
Sbjct: 323 VPGVSEEELADAAQLAS-LADETPEGRSIV-ELAKKLGIELREDDLQSHAEFVPFT---A 377
Query: 408 RTAITYIDSNGDWHRTSKGAPEQIIDLCG-LKGEMRRKAHQIIDNFAERGLRALGVGRQT 466
+T ++ +D G KGA + I G + +D + G L V
Sbjct: 378 QTRMSGVDLPGG-REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG 436
Query: 467 VPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQ----LAIGKE 522
+G++ L D + E +G+ MITGD AI E
Sbjct: 437 -------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE 483
Query: 523 TGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERK 582
G V++ I +A PE K ++++ Q
Sbjct: 484 AG----------------------------VDDFIAEAT------PEDKLALIRQEQAEG 509
Query: 583 HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIV 621
+ MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 510 RLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 113 bits (283), Expect = 1e-25
Identities = 144/581 (24%), Positives = 233/581 (40%), Gaps = 89/581 (15%)
Query: 67 MWNPLSWVMEAAAIMAIVLA---NGGGKPPDWPD-FVGIV-VLLFINSTISFIEENNA-- 119
NP+ +++ +++ + G P + F I+ +LFI + E A
Sbjct: 30 WRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEG 89
Query: 120 -GNAAAALMAGLAPKT--KVLRDE-KWSEQEAEILVPGDIISIKLGDIVPADARLLEGDP 175
G A A + G T K+LRD+ + A+ L GDI+ ++ GD++P D ++EG
Sbjct: 90 RGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA 149
Query: 176 LKIDQAALTGESLPVTKNPGDEVFS---GSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 232
+D++A+TGES PV K G + S G+ + A TF + LV+
Sbjct: 150 -SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGA 208
Query: 233 NQVGHFQKVLTAIG-NFCICSIAVGMFIEIIVMWAIQRRSYRDG----IDNLLVLLIGGI 287
+ +K I + ++ + + +W + G + L+ LL+ I
Sbjct: 209 QR----RKTPNEIALTILLIALTLVFLLVTATLWPF---AAYGGNAISVTVLVALLVCLI 261
Query: 288 PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLSVDKS 346
P + +LS G R+ I A+E +D L DKTGT+TL N+L+ +
Sbjct: 262 PTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEF- 320
Query: 347 LIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVD 406
+ +G D L AA AS + + SIV +LA R + F
Sbjct: 321 ---IPAQGVDEKTLADAAQLAS-LADDTPEGKSIV-ILAKQLGIREDDVQSLHATFVEFT 375
Query: 407 KRTAITYIDSNGDWHRTSKGAPEQIIDLC-GLKGEMRRKAHQIIDNFAERGLRALGVGRQ 465
+T ++ I+ + KGA + I G + Q +D A +G L V
Sbjct: 376 AQTRMSGINLDNG-RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVV--- 431
Query: 466 TVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQ----LAIGK 521
E + G++ L D + E + +G+ MITGD AI
Sbjct: 432 --------CEDN--RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAA 481
Query: 522 ETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGF-AGVFPEHKYEIVKKLQE 580
E G D F A PE K ++++ Q
Sbjct: 482 EAG-----------------------------------VDDFIAEATPEDKIALIRQEQA 506
Query: 581 RKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIV 621
+ MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 507 EGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 2e-25
Identities = 158/617 (25%), Positives = 241/617 (39%), Gaps = 162/617 (26%)
Query: 67 MW-NPLSWVMEAAAIMAIVL--ANGGGKPPDWPDFVG-IVVLLFINSTISF--IEENNA- 119
NP+ +V+E +I+ +L A + F I + L+ T+ F E A
Sbjct: 30 QIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWF--TVLFANFAEALAE 87
Query: 120 --GNAAAA--------LMAGLAPKTKVLRDEKWSEQ-EAEILVPGDIISIKLGDIVPADA 168
G A A A + LR+ +E+ A L GDI+ ++ G+I+PAD
Sbjct: 88 GRGKAQADSLRGAKKDTFA------RKLREPGAAEEVPATELRKGDIVLVEAGEIIPADG 141
Query: 169 RLLEGDPLKIDQAALTGESLPVTKNPGDEVFS---GSTCKQGEIEAVVIATGVHTFFGKA 225
++EG +D++A+TGES PV + G + S G+ I + A +F +
Sbjct: 142 EVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRM 200
Query: 226 AHLVDSTNQVGHFQK------------VLTAIGNFCIC-------SIAVGMFIEIIVMWA 266
LV+ + QK LT I F + + G + I V+ A
Sbjct: 201 IALVEGAKR----QKTPNEIALTILLAGLTII--FLLVVATLPPFAAYSGGALSITVLVA 254
Query: 267 IQRRSYRDGIDNLLVLLIGGIPIAMPT----VLSVTMAIG---SHRLSQQGAITKRMTAI 319
LLV LI PT +LS AIG R+ Q I A+
Sbjct: 255 ------------LLVCLI-------PTTIGGLLS---AIGIAGMDRVLQANVIATSGRAV 292
Query: 320 EEMAGMDVLCSDKTGTLTL-NKLSVDKSLIEVF--VKGTDSDGLLLAAARASRVENQDAI 376
E +D L DKTGT+TL N+ + + F V G + L AA +S + ++
Sbjct: 293 EAAGDVDTLLLDKTGTITLGNRQASE------FLPVPGVTEEELADAAQLSS-LADETPE 345
Query: 377 DASIVGMLA----DPKEARAGITEVHFLPFNPVDKRTAITY---IDSNGDWHRTSKGAPE 429
SIV +LA + +E F+PF +A T +D +G R KGA +
Sbjct: 346 GRSIV-VLAKQRFNLRERDLQSLHATFVPF------SAQTRMSGVDLDGREIR--KGAVD 396
Query: 430 QIIDLCGLK-GEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLF 488
I G + +D A +G L V +G++ L
Sbjct: 397 AIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAEDN-------------RVLGVIYLK 443
Query: 489 DPPRHDSAETIRRALDLGVNVKMITGD-QL---AIGKETGRRLGMGTNMYPSSSLLGQSK 544
D + E +G+ MITGD L AI E G
Sbjct: 444 DIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG-------------------- 483
Query: 545 DESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG 604
V++ + +A PE K ++++ Q + MTGDG NDAPAL +AD+G
Sbjct: 484 --------VDDFLAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVG 529
Query: 605 IAVADATDAARSASDIV 621
+A+ T AA+ A ++V
Sbjct: 530 VAMNSGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 109 bits (272), Expect = 2e-24
Identities = 122/564 (21%), Positives = 241/564 (42%), Gaps = 67/564 (11%)
Query: 98 FVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLR-DEKWSEQEAEILVPGDII 156
+ ++ L+F N + + E A A K + ++ D + +A L G I+
Sbjct: 70 IILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIV 129
Query: 157 SIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPG---DEVFSGSTCKQGEIEAVV 213
+ G+ +P D ++++G +D++A+TGES PV K G D V G++ +E +
Sbjct: 130 RVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEI 188
Query: 214 IATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMFIEIIV-MWAIQR-RS 271
+ H+F K LV+ + +K I F + +F+ +I+ M+ + + +
Sbjct: 189 TSEPGHSFLDKMIGLVEGATR----KKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLN 244
Query: 272 YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 331
+ I L+ L + IP + +LS G R++Q + K ++E ++VL D
Sbjct: 245 FNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILD 304
Query: 332 KTGTLTL-NKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEA 390
KTGT+T N+++ + VK + + L+ AA +S + + SIV LA +
Sbjct: 305 KTGTITYGNRMADAF----IPVKSSSFERLVKAAYESS-IADDTPEGRSIV-KLAYKQHI 358
Query: 391 RAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIID-LCGLKGEMRRKAHQII 449
++PF + + + + + + + KGAP ++ + G + ++
Sbjct: 359 DLPQEVGEYIPFTAETRMSGVKF--TTREVY---KGAPNSMVKRVKEAGGHIPVDLDALV 413
Query: 450 DNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNV 509
+++G L V +G++ L D + E R ++G+
Sbjct: 414 KGVSKKGGTPLVVLEDNE-------------ILGVIYLKDVIKDGLVERFRELREMGIET 460
Query: 510 KMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569
M TGD + G+ D +A PE
Sbjct: 461 VMCTGDNELTAATIAKEAGV---------------DRFVAECK---------------PE 490
Query: 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSV 629
K ++++ Q + HI MTGDG NDAPAL A++G+A+ T +A+ A++++ + +
Sbjct: 491 DKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTK 550
Query: 630 IVSAVLTSRAIFQRMKNYTIYAVS 653
++ VL + + + T ++++
Sbjct: 551 LMEVVLIGKQLLMTRGSLTTFSIA 574
|
Length = 673 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 89.0 bits (221), Expect = 6e-18
Identities = 55/168 (32%), Positives = 76/168 (45%), Gaps = 38/168 (22%)
Query: 482 VGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSS 537
LL + DP R DS ++R G + M+TGD AI KE G
Sbjct: 642 AALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG------------- 688
Query: 538 SLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPA 597
++E+I AGV P+ K E +K+LQ + M GDG+NDAPA
Sbjct: 689 ---------------IDEVI------AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPA 727
Query: 598 LKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMK 645
L +AD+GIA+ +D A + I L L + A+ SRA + MK
Sbjct: 728 LAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMK 775
|
Length = 834 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 76.1 bits (188), Expect = 4e-17
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 13 NVDLERIPVAEVFEQLKCTP-KGLTTAEGEKRLQIFGYNKLEE-KKESKLLKFLGFMWNP 70
+D + + EV E+L+ KGL++ E +RL+ +G N+L KK S LL+FL NP
Sbjct: 1 ELDWHALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNP 60
Query: 71 LSWVMEAAAIMAIVL 85
L +++ AAA+++ +L
Sbjct: 61 LIYILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 4e-14
Identities = 57/193 (29%), Positives = 78/193 (40%), Gaps = 44/193 (22%)
Query: 480 EFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 539
+ +GL+ L D R D+ + I LG+ M+TGD LG+
Sbjct: 558 DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI---------- 607
Query: 540 LGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 599
D AG+ PE K + V +L + + M GDG+NDAPA+K
Sbjct: 608 ---------------------DFRAGLLPEDKVKAVTELNQHAPL-AMVGDGINDAPAMK 645
Query: 600 RADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIV 659
A IGIA+ TD A +D LT L + + SRA T + I I
Sbjct: 646 AASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA--------THANIRQNITIA 697
Query: 660 LG----FLLVALL 668
LG FL+ LL
Sbjct: 698 LGLKAIFLVTTLL 710
|
Length = 741 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 64.5 bits (158), Expect = 5e-13
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 18 RIPVAEVFEQLKCTP-KGLTTAEGEKRLQIFGYNKL-EEKKESKLLKFLGFMWNPLSWVM 75
+ V EV +L KGLT AE E+RL+ +G N+L E+K +S FL +PL ++
Sbjct: 3 TLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVIIL 62
Query: 76 EAAAIMA 82
AAI++
Sbjct: 63 LIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 66.9 bits (164), Expect = 4e-11
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
Query: 102 VVLLFINSTISFIEENNAGNAA----AALMAGLAPKTKV-LRDEKWSEQEAEILVPGDII 156
V+LLF I E A + A +ALMA L P+T LRD + E L PGD+I
Sbjct: 212 VLLLF---LIGERLEGYAASRARRGVSALMA-LVPETATRLRDGEREEVAIADLRPGDVI 267
Query: 157 SIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTC 204
+ G +PAD +LL D++ALTGES+PV + G++V +G+T
Sbjct: 268 EVAAGGRLPADGKLLSPFA-SFDESALTGESIPVERATGEKVPAGATS 314
|
Length = 741 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 8e-10
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 25/226 (11%)
Query: 152 PGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEA 211
PG ++ + GD VP D + +G+ +D+A LTGE +P K GD V +G+ + G +
Sbjct: 343 PGMLLRLTTGDRVPVDGEITQGEAW-LDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLF 401
Query: 212 VVIATGVHTFFGKAAHLV----DSTNQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAI 267
A G HT + +V S ++G ++A+ F + + + I W
Sbjct: 402 RASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAV--FVPVVVVIALVSAAI--W-- 455
Query: 268 QRRSYRDG----IDNLLVLLIGGIPIAMPTVLSVT--MAI--GSHRLSQQGAITKRMTAI 319
Y G I LV+ + IA P L + M+I G R ++ G + + A+
Sbjct: 456 ----YFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADAL 511
Query: 320 EEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAA 365
+ + +D L DKTGTLT K V ++ F ++ L LAAA
Sbjct: 512 QRASTLDTLVFDKTGTLTEGKPQVVA--VKTFNGVDEAQALRLAAA 555
|
Length = 834 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 1e-07
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 548 IASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAV 607
+PVE + FAG PE K +I+++L++R M G+G ND AL+ AD+GI
Sbjct: 65 FVGIPVERV------FAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICT 118
Query: 608 ---ADATDAARSASDIVLTEPGLSVIVSA 633
+ +D+VL E + +
Sbjct: 119 IQQEGVPERLLLTADVVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 8e-07
Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 19/123 (15%)
Query: 480 EFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 539
+GL+ L DP + E ++ + G+ + ++TGD R LG+ +
Sbjct: 84 VVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALV----- 138
Query: 540 LGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 599
P ++ E A +++L + M GDGVND PA K
Sbjct: 139 SADLYGLVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAK 184
Query: 600 RAD 602
A
Sbjct: 185 AAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 3e-04
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 589 GDGVNDAPALKRADIGIAVADATDAARSASDIVLTEP 625
GD ND + A G+AVA+A + + A+D V +
Sbjct: 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 7e-04
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 383 MLADPKEARAGITEVHFLPFNPVDKR-TAITYIDSNGDWHRTSKGAPEQIIDLC 435
+ D +E RA V +PFN KR + + ++ + + KGAPE+I++ C
Sbjct: 35 LGIDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILERC 88
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.001
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 555 ELIEKADGFAG------VFPEHKYEIVKKLQERKHI----CGMTGDGVNDAPALKRADIG 604
L + G V +K + + L ++ I GDG ND +K A +G
Sbjct: 131 RLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLG 190
Query: 605 IAVADATDAARSASDIVLTEPGLSVIVS 632
IA +A + +DI + + L+ I+
Sbjct: 191 IAF-NAKPKLQQKADICINKKDLTDILP 217
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.002
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 570 HKYEIVKKLQERKHICG---MT-GDGVNDAPALKRADIGIAVADATDAARSASDIV 621
K +K L + I + GDG ND L+ A +G+A+ +A+ ++A+D V
Sbjct: 186 SKGTALKALAKHLGIDLEEVIAFGDGENDIEMLELAGLGVAMGNASPEVKAAADYV 241
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 949 | |||
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.93 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.6 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.46 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.32 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.08 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.01 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.94 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.89 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.81 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.78 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.75 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.73 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.71 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.67 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.65 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.65 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.62 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.61 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.6 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.57 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.48 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.45 | |
| PLN02887 | 580 | hydrolase family protein | 98.42 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.42 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.42 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.38 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.35 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.32 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.3 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.27 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.26 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.25 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.22 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.12 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.11 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.1 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.03 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.96 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.94 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.86 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.77 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.72 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.56 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.54 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.53 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.5 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.35 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.27 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.23 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.17 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.1 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.1 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.88 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.84 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.81 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.76 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.72 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.72 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.7 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.69 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.68 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.68 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 96.61 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.55 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.54 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.51 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.23 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.19 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.16 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.99 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.97 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 95.96 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 95.96 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.88 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 95.86 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 95.72 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.66 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.56 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.31 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.3 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.3 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 95.28 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 95.27 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.23 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.05 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.01 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 94.98 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 94.97 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.79 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 94.76 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 94.5 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.39 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 94.3 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.06 | |
| PLN02940 | 382 | riboflavin kinase | 93.95 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 93.86 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 93.74 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 93.34 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 93.28 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 93.26 | |
| PLN02811 | 220 | hydrolase | 93.26 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 93.13 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 93.06 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 92.78 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 92.7 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 92.36 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.1 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 91.86 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 91.37 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 91.2 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 91.16 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 90.4 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 90.32 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 90.18 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 89.64 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 89.45 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 88.86 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 88.51 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 88.33 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 88.11 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 87.7 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 87.18 | |
| PLN02580 | 384 | trehalose-phosphatase | 86.79 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 85.97 | |
| PLN03017 | 366 | trehalose-phosphatase | 85.95 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 83.47 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 82.97 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 82.88 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 82.81 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 82.74 |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-198 Score=1617.92 Aligned_cols=936 Identities=84% Similarity=1.278 Sum_probs=922.7
Q ss_pred chhhhhccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHH
Q 041450 5 SLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIV 84 (949)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~ail~~~ 84 (949)
+++++++|.+|++..|.|||++.|+|+++|||++|+++|+++||+|+++++|++.+++|+.+||||++|+|+++|++++.
T Consensus 7 s~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~ 86 (942)
T KOG0205|consen 7 SLEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIG 86 (942)
T ss_pred chhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCee
Q 041450 85 LANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIV 164 (949)
Q Consensus 85 l~~~~~~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~I 164 (949)
+.++++++++|.++++|+.++++|++++|+||++++++.++||+.++++++|+|||+|.++++++||||||+.++.||+|
T Consensus 87 Lang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIi 166 (942)
T KOG0205|consen 87 LANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDII 166 (942)
T ss_pred HhcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEecCCeEEEecCCCCCCceeecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhccCCCChHHHHHHH
Q 041450 165 PADARLLEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 244 (949)
Q Consensus 165 PaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~~~~~~~~~~~~~ 244 (949)
|||++|++|+.++||||+|||||.|+.|++||.+|+||+|++|++.++|++||.+|++||.+++++++++.+|||+.++.
T Consensus 167 PaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~ 246 (942)
T KOG0205|consen 167 PADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTG 246 (942)
T ss_pred cCccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhhhcC
Q 041450 245 IGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 324 (949)
Q Consensus 245 i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~ 324 (949)
|+++|+|++++++++.++++|+.+.+.++..+.+.+++++.++|++||.++++++++|++||+++|+++|+++++|+|++
T Consensus 247 IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAG 326 (942)
T KOG0205|consen 247 IGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 326 (942)
T ss_pred hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeCCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccChhhhhcCceEEeeccCCC
Q 041450 325 MDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNP 404 (949)
Q Consensus 325 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s 404 (949)
+|++|+|||||||.|++++++..++.+.++.++|++++.||++++.+++|++|.|++++++||++++.+|+++|++||||
T Consensus 327 mdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnP 406 (942)
T KOG0205|consen 327 MDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNP 406 (942)
T ss_pred ceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCc
Confidence 99999999999999999999988888999999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEEEcCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEE
Q 041450 405 VDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGL 484 (949)
Q Consensus 405 ~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~ 484 (949)
++||.+.+|.+++|++++++||||++|+++|+.+++++++.++.+++||++|+|.|++|++..|++.++..+.+|+|+|+
T Consensus 407 V~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gl 486 (942)
T KOG0205|consen 407 VDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGL 486 (942)
T ss_pred cccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEE
Q 041450 485 LPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFA 564 (949)
Q Consensus 485 ~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 564 (949)
+.+.||||+|+.++|++..+.|++|+|+|||+...++++++++|+++|+|++..+.|...++.+...++++++++++.||
T Consensus 487 lp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfA 566 (942)
T KOG0205|consen 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFA 566 (942)
T ss_pred cccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHH
Q 041450 565 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRM 644 (949)
Q Consensus 565 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i 644 (949)
.++|+||+++|+.||++||+|+|+|||+||+||||+||+|||+.+++|+|+.+||||+++|+++.|+.++..||.+|+||
T Consensus 567 gVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrm 646 (942)
T KOG0205|consen 567 GVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 646 (942)
T ss_pred ccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHhhhcchhccccCCCCCCCCCCchhhHHHHHHHHHHHHHHHH
Q 041450 645 KNYTIYAVSITIRIVLGFLLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMAL 724 (949)
Q Consensus 645 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~il~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 724 (949)
++|.+|+++.++.++++|+...+.|.+.|+|++++++++++|++.|++++|+++|+|.|++|+++++|..++++|.|+++
T Consensus 647 knytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~ 726 (942)
T KOG0205|consen 647 KNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAI 726 (942)
T ss_pred hhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccccCcccccCchhHHHHHHHHHHHHHHHHHhhhhccCCCCcccChhHHHHHHHHHHHHHHHHHH
Q 041450 725 VTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVERPGVMLVGAFLVAQLLATIIA 804 (949)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 804 (949)
++..+||..+.+.||+..||+....++..+..++.|+++++.+|+++|++|+++|+|.++|+|+++.+++.+++++++++
T Consensus 727 ~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliatlia 806 (942)
T KOG0205|consen 727 MTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIATLIA 806 (942)
T ss_pred HHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988888888999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccccccCchhHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCchhhhhhhcccccccccccCCchhhHHhHHHhhccc
Q 041450 805 VYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTM 884 (949)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 884 (949)
+|.+|.|.+..++.|.|..++|+++++.+++.++.|+..||.+++++|++++++|++++.|++||++||+.+|+.++|++
T Consensus 807 vya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a~~~~~qrt~ 886 (942)
T KOG0205|consen 807 VYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREAQWALAQRTL 886 (942)
T ss_pred HHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhhHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccchhhhHHHHHHHhhhhHHHHHhhhhccccchhhhhhcCCChhhhhhcccC
Q 041450 885 HGLQTSESTVNEKNSNRELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949 (949)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 949 (949)
|+.++++ .+|++++++|++||||++||||+|+++||++|++++||+|+|++ |||||
T Consensus 887 ~~lq~~~--------~~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 887 HGLQPPE--------GRELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred cccCCCc--------cchhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 9999883 27899999999999999999999999999999999999999999 89996
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-135 Score=1151.84 Aligned_cols=821 Identities=28% Similarity=0.410 Sum_probs=675.4
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccccc-ccchHHHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCC
Q 041450 15 DLERIPVAEVFEQLKCT-PKGLTTAEGEKRLQIFGYNKLEEK-KESKLLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKP 92 (949)
Q Consensus 15 ~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~-~~~~~~~~~~~~~~~~~~~l~~~ail~~~l~~~~~~~ 92 (949)
+.|..+.+|++..|.++ ++|||++|+.+|+++||+|+++.+ ..+.|+++++||.||+..+|+++|++|+++.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 45678999999999998 789999999999999999999855 5889999999999999999999999999997
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCeeccceeEEe
Q 041450 93 PDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLE 172 (949)
Q Consensus 93 ~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~ 172 (949)
.|.+++.|.+++++|.+++++||||+++++++|+++.|+.++|+|+|+.+.++++||||||||.++-||+||||.||++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEecCCCCCCceeecCC--------------CCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhccC-CCCh
Q 041450 173 GDPLKIDQAALTGESLPVTKNP--------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGH 237 (949)
Q Consensus 173 g~~~~Vdes~LTGEs~pv~K~~--------------g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~~-~~~~ 237 (949)
..++.||||.|||||.|+.|.. .|++|+||.|..|.++|+|+.||.+|.+|++.+.++..+ .++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9889999999999999999954 267999999999999999999999999999999998774 6899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHh---c-c---CcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhh
Q 041450 238 FQKVLTAIGNFCICSIAVGMFIEIIV--MWAI---Q-R---RSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 308 (949)
Q Consensus 238 ~~~~~~~i~~~~~~~i~~~~~~~~~~--~~~~---~-~---~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~ 308 (949)
+|+.++.++..+.-.+.++++..+++ .|+. . + ..+.+.+..++++.+++||++||.+++++++.|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999987542222222222222 2221 0 2 344556778899999999999999999999999999999
Q ss_pred CCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccC-----------CC------------------ChH-
Q 041450 309 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVK-----------GT------------------DSD- 358 (949)
Q Consensus 309 ~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~-----------~~------------------~~~- 358 (949)
++++||++.++|+||.+++||||||||||+|+|++.++++..... ++ ..+
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 999999999999999999999999999999999999987521110 01 111
Q ss_pred --HHHHHHHHhcccc-----------CCChhHHHHHHhcc-----Chhh--------------hhcCceEEeeccCCCCC
Q 041450 359 --GLLLAAARASRVE-----------NQDAIDASIVGMLA-----DPKE--------------ARAGITEVHFLPFNPVD 406 (949)
Q Consensus 359 --~~l~~~a~~~~~~-----------~~~~~~~ai~~~~~-----~~~~--------------~~~~~~~l~~~pF~s~~ 406 (949)
+++..++.|+... -++|.+.|+...+. +... ....++.+..+||++++
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 3344455554321 23677777765442 1110 01123445889999999
Q ss_pred ccEEEEEEcCCCc--EEEEecCchHHHHHhhcC------------chHHHHHHHHHHHHHHHhcCeEEEEEEeecCC---
Q 041450 407 KRTAITYIDSNGD--WHRTSKGAPEQIIDLCGL------------KGEMRRKAHQIIDNFAERGLRALGVGRQTVPE--- 469 (949)
Q Consensus 407 kr~sv~~~~~~g~--~~~~~KGa~e~il~~~~~------------~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~--- 469 (949)
|+|++.+.++.|+ +..|.|||+|.|+++|+. ++..++.+.+...+++++|+|+|++|+++.+.
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999876664 789999999999999953 34567888999999999999999999997763
Q ss_pred --------ccccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCccc
Q 041450 470 --------KTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSSL 539 (949)
Q Consensus 470 --------~~~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~--~~~~l 539 (949)
..+...|++|+|+|++++.||||++++++|+.|+++||+|+|+|||+.+||.+||+++|+..+.. ....+
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 12456789999999999999999999999999999999999999999999999999999975432 34566
Q ss_pred cCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEec-cchHHHHhcc
Q 041450 540 LGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVA-DATDAARSAS 618 (949)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aa 618 (949)
+|.+.+ .++++++++.+.+..+|+|++|+||.+||+.||++|.+|+|+|||+||+||||+|||||||| +|||+||+||
T Consensus 636 TG~efD-~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 636 TGSEFD-DLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred chhhhh-cCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 676655 78889999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhccCCCChHHHHHHHHhhhcc-hhccccCC
Q 041450 619 DIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVL-GFLLVALLWKFDFPPFMILIIAILNDGT-IMTISKDR 696 (949)
Q Consensus 619 Divl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~~~~il~i~i~~~~~-~~~~~~~~ 696 (949)
|+||.||||++|+.||++||.+|+||++|+.|.++.|+..+. .++..++..+.++.|+|+||+|+++|++ ++++++++
T Consensus 715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep 794 (972)
T KOG0202|consen 715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEP 794 (972)
T ss_pred hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCC
Confidence 999999999999999999999999999999999999997555 4555667799999999999999999997 79999999
Q ss_pred CCCC---CCCCc----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCcccccCch-----------------
Q 041450 697 VKPS---PMPDS----WKLKEIFGTGVVLGTYMALVTAFFFWLIHDTRFFTNTFNLKEIHEKP----------------- 752 (949)
Q Consensus 697 ~~~~---~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----------------- 752 (949)
+++. ++|.+ .....++...+..|.|+.+.++..|++.+... ......+.. .++
T Consensus 795 ~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~--~~~vt~~~~-~~~~~c~~~~~~~~c~~F~~ 871 (972)
T KOG0202|consen 795 VDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA--DGKVTYRQL-AHYNSCCRDFYGSRCAVFED 871 (972)
T ss_pred CChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC--CCCcChhhh-cchhhhcccccccchhhhcc
Confidence 8764 22332 23345555566679999988886555444311 110000000 000
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhccCCCCcccCh---hHHHHHHHHHHHHHHHHHHHhhc-c-cccccCchhHHHHHHHHH
Q 041450 753 DMLSAALYLQVSIISQALIFVTRSRSWSFVERP---GVMLVGAFLVAQLLATIIAVYAK-W-EFARIEGIGWGWAGAIWI 827 (949)
Q Consensus 753 ~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~ 827 (949)
....|+.|..+.++..++.++.|+...+.+..+ |.|+.+++.++.+...++ +|.+ . ..++..+.+|.-|++++.
T Consensus 872 ~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~i-lYvp~l~~iFq~~~l~~~ew~~vl~ 950 (972)
T KOG0202|consen 872 MCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLV-LYVPPLQRIFQTEPLSLAEWLLVLA 950 (972)
T ss_pred cccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheE-EEechhhhhheecCCcHHHHHHHHH
Confidence 012366677788888899999999876544332 338888888887766555 4443 1 234566777777777788
Q ss_pred HHHHHHHHhHHHHHHHHhhc
Q 041450 828 FSIITYLPLDPLKFVIRYAQ 847 (949)
Q Consensus 828 ~~~~~~~~~~~~k~~~r~~~ 847 (949)
++..+++++|++|++.|+..
T Consensus 951 ~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 951 ISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred HhhhhhhHHHHHHHHHHhcc
Confidence 99999999999999998764
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-130 Score=1193.69 Aligned_cols=753 Identities=60% Similarity=0.941 Sum_probs=676.5
Q ss_pred CCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCCCCchhHHHHHHHHHHHHHHHH
Q 041450 34 GLTTAEGEKRLQIFGYNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISF 113 (949)
Q Consensus 34 GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~ii~~~~i~~~i~~ 113 (949)
|||++|+++|+++||+|++++++++.|+.|+++|++|++|+++++++++++++ +|.+++.|+++++++..+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999988888999999999999999999999999975 89999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCeeccceeEEecCCeEEEecCCCCCCceeecC
Q 041450 114 IEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKN 193 (949)
Q Consensus 114 ~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~ 193 (949)
++|+++++++++|++..+++++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|+
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999977999999999999999999
Q ss_pred CCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhccC-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcH
Q 041450 194 PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSY 272 (949)
Q Consensus 194 ~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~ 272 (949)
+||.+|+||.|.+|++.++|++||.+|.+||+++++++.. .++++|+.+++++.+++..+++.+++.+++.+...+.++
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998775 677999999999988766555444433333333256788
Q ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeecc
Q 041450 273 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFV 352 (949)
Q Consensus 273 ~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 352 (949)
.+++..++++++++|||+||++++++++.++++|+++|+++|+++++|+||++|++|||||||||+|+|+|.+++. ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999998764 22
Q ss_pred CCCChHHHHHHHHHhccccCCChhHHHHHHhccChhhhhcCceEEeeccCCCCCccEEEEEEcCC-CcEEEEecCchHHH
Q 041450 353 KGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSN-GDWHRTSKGAPEQI 431 (949)
Q Consensus 353 ~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~-g~~~~~~KGa~e~i 431 (949)
.+.+.++++.+++.|+....+||+|.|++.++.+..+.+..++.++.+||++.+|+|++++.+++ |+.++++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 23667788888887776666799999999987765545567888999999999999999888654 77888999999999
Q ss_pred HHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEE
Q 041450 432 IDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKM 511 (949)
Q Consensus 432 l~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~m 511 (949)
+++|++..+.++++++.+++++.+|+|++++|+++ .|++|+|+|+++++||||||++++|++|+++||+|+|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998776777888889999999999999999973 2678999999999999999999999999999999999
Q ss_pred EcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCC
Q 041450 512 ITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDG 591 (949)
Q Consensus 512 lTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG 591 (949)
+|||++.||.++|+++||..+.+....+......+.++++++++++++.++|||++|+||+++|+.+|++|++|+|+|||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDG 543 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 543 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 99999999999999999976544444443333445677888999999999999999999999999999999999999999
Q ss_pred ccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 041450 592 VNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALLWKF 671 (949)
Q Consensus 592 ~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~~~~~~~ 671 (949)
+||+|||++|||||||++|+|+||++||+||++++|++|+.++++||++|+||++|+.|.++.|+..++.+++..+++++
T Consensus 544 vNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~ 623 (755)
T TIGR01647 544 VNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF 623 (755)
T ss_pred cccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888777777777788
Q ss_pred CCChHHHHHHHHhhhcchhccccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCcccccCc
Q 041450 672 DFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALVTAFFFWLIHDTRFFTNTFNLKEIHEK 751 (949)
Q Consensus 672 ~~~~~~il~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 751 (949)
+++|+|++|+++++|++.+++++|+++|+++|++|+..+++..+++.|++.++.++.+||+.+...++...++. ...
T Consensus 624 ~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 700 (755)
T TIGR01647 624 YFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGL---QLL 700 (755)
T ss_pred chhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccc---ccc
Confidence 89999999999999999999999999999999999999999999999999999999888776642222111111 113
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHHh
Q 041450 752 PDMLSAALYLQVSIISQALIFVTRSRSWSFVERPGVMLVGAFLVAQLLATIIAVY 806 (949)
Q Consensus 752 ~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 806 (949)
..+.+|++|+.+.+.+++++|+.|+++.+|.++|++++++++++.+++.++++.|
T Consensus 701 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~ 755 (755)
T TIGR01647 701 HGNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAVY 755 (755)
T ss_pred HhhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhhC
Confidence 4568899999999999999999999999999999999999999999988887643
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-127 Score=1186.42 Aligned_cols=805 Identities=26% Similarity=0.417 Sum_probs=678.8
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccccccc-chHHHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCCC
Q 041450 15 DLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKE-SKLLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPP 93 (949)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~ail~~~l~~~~~~~~ 93 (949)
..+..+.+++++.|+++.+|||++|+++|+++||+|+++.+++ ++|..|+++|++|++++++++++++++++
T Consensus 48 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------- 120 (902)
T PRK10517 48 KAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------- 120 (902)
T ss_pred HHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------
Confidence 4457899999999999999999999999999999999998775 57889999999999999999999999975
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeC------CeEEEEeccccCCCcEEEEcCCCeeccc
Q 041450 94 DWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRD------EKWSEQEAEILVPGDIISIKLGDIVPAD 167 (949)
Q Consensus 94 ~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rd------g~~~~i~~~~Lv~GDiV~l~~Gd~IPaD 167 (949)
+|.++++|+++++++..+++++|+|+++++++|++..+++++|+|| |++++|+++||||||+|.|++||+||||
T Consensus 121 ~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 121 DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 8999999999999999999999999999999999999999999999 7899999999999999999999999999
Q ss_pred eeEEecCCeEEEecCCCCCCceeecCCCC-------------ceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhcc-C
Q 041450 168 ARLLEGDPLKIDQAALTGESLPVTKNPGD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-N 233 (949)
Q Consensus 168 ~~ll~g~~~~Vdes~LTGEs~pv~K~~g~-------------~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~-~ 233 (949)
|+|++|+++.||||+|||||.|+.|.+++ .+|+||.|.+|++.++|++||.+|.+||+++++++. .
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999999874 799999999999999999999999999999999876 5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCccc
Q 041450 234 QVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 313 (949)
Q Consensus 234 ~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~v 313 (949)
+++++|+.+++++++++.+.++...+. ++.+.+.+.+|.+++..++++++++|||+||++++++++.|+.+|+++|+++
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v-~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilV 359 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVV-LLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIV 359 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEE
Confidence 789999999999887654443323222 2223334567888999999999999999999999999999999999999999
Q ss_pred ccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhcccc--CCChhHHHHHHhccCh--hh
Q 041450 314 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVE--NQDAIDASIVGMLADP--KE 389 (949)
Q Consensus 314 k~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~--~~~~~~~ai~~~~~~~--~~ 389 (949)
|+++++|+||++|+||||||||||+|+|+|.+.. ...+.+.++++..++.++... ..||+|.|++.++... ..
T Consensus 360 k~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~---~~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~ 436 (902)
T PRK10517 360 KRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHT---DISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARS 436 (902)
T ss_pred ecchhhhhccCCCEEEecCCCccccceEEEEEEe---cCCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhh
Confidence 9999999999999999999999999999998763 123445667777777655432 3599999999876532 22
Q ss_pred hhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcC----------chHHHHHHHHHHHHHHHhcCeE
Q 041450 390 ARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGL----------KGEMRRKAHQIIDNFAERGLRA 459 (949)
Q Consensus 390 ~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~ 459 (949)
....++.++.+||+|.+|+|++++.+.++.+..++||+||.++++|.. +++..+++.+..++++++|+|+
T Consensus 437 ~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 516 (902)
T PRK10517 437 LASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRV 516 (902)
T ss_pred hhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 345678889999999999999998877777889999999999999963 2234566777889999999999
Q ss_pred EEEEEeecCCccc---cCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC
Q 041450 460 LGVGRQTVPEKTK---ESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 536 (949)
Q Consensus 460 l~~a~~~~~~~~~---~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~ 536 (949)
+++||+.++..+. ...|++++|+|+++++||||||++++|++|+++||+|+|+||||+.||.++|+++||.. .
T Consensus 517 lavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~ 592 (902)
T PRK10517 517 VAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----G 592 (902)
T ss_pred EEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----c
Confidence 9999998764322 12477999999999999999999999999999999999999999999999999999952 3
Q ss_pred ccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHh
Q 041450 537 SSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARS 616 (949)
Q Consensus 537 ~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~ 616 (949)
.++.|.+.+ .++++++++.+++.++|||++|+||.++|+.+|++|++|+|+|||+||+||||+||||||||+|+|+||+
T Consensus 593 ~v~~G~el~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAke 671 (902)
T PRK10517 593 EVLIGSDIE-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIARE 671 (902)
T ss_pred CceeHHHHH-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHH
Confidence 455555444 6788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCChHHHHHHHHhhhcchhccccC
Q 041450 617 ASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALLWK-FDFPPFMILIIAILNDGTIMTISKD 695 (949)
Q Consensus 617 aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~~~~~~-~~~~~~~il~i~i~~~~~~~~~~~~ 695 (949)
+||+||++++|++|+.++++||++|+||+||+.|.++.|+..++.+++..++++ +|++|+|++|+|+++|.+.+++++|
T Consensus 672 aADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d 751 (902)
T PRK10517 672 AADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFD 751 (902)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCC
Confidence 999999999999999999999999999999999999999988877777666666 6999999999999999889999999
Q ss_pred CCCCCC--CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCcccccCchhHHHHHHHHHHHHHHHHHhhh
Q 041450 696 RVKPSP--MPDSWKLKEIFGTGVVLGTYMALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFV 773 (949)
Q Consensus 696 ~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 773 (949)
+++++. +|.+|+...+...+++.|+..+++++..|++++.. +|... .......++..|+.+.+++.+++|+
T Consensus 752 ~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~F~~~~~~q~~~~~~ 824 (902)
T PRK10517 752 NVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHANT-PETQTLFQSGWFVVGLLSQTLIVHM 824 (902)
T ss_pred CCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccccc-hhhHhHHHHHHHHHHHHHHHHHHHh
Confidence 998874 68889888888888888999888887766665421 11100 0001234566799999999999999
Q ss_pred hccCC-CCcccChhHHHHHHHHHHHHHHHHHHHhhcccccccCchh--HHHHHHHHHHHHHHHHHhHHHHHHHH
Q 041450 774 TRSRS-WSFVERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIG--WGWAGAIWIFSIITYLPLDPLKFVIR 844 (949)
Q Consensus 774 ~r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~k~~~r 844 (949)
+|+++ .+|.+++.|..+++.++.+++.+++++...-+.+++.+.+ +..|+++++++.. ++.++.|....
T Consensus 825 ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~ 896 (902)
T PRK10517 825 IRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYS 896 (902)
T ss_pred hccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 99987 5566666666666666655555444311112344555666 4444444444433 55677775433
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-128 Score=1196.66 Aligned_cols=782 Identities=32% Similarity=0.503 Sum_probs=667.1
Q ss_pred cccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHHc
Q 041450 12 ENVDLERIPVA--EVFEQLKCT-PKGLTTAEGEKRLQIFGYNKLEEKK-ESKLLKFLGFMWNPLSWVMEAAAIMAIVLAN 87 (949)
Q Consensus 12 ~~~~~~~~~~~--~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~ail~~~l~~ 87 (949)
....+|..+.+ ++...+.++ .+||+++|+.+|+++||+|++++++ .+.|.+|+.+|++|+.++++++++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~- 97 (917)
T COG0474 19 TSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG- 97 (917)
T ss_pred CcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 34567778888 899999887 7899999999999999999999655 788999999999999999999999999986
Q ss_pred CCCCCCCc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCe
Q 041450 88 GGGKPPDW----PDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDI 163 (949)
Q Consensus 88 ~~~~~~~~----~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~ 163 (949)
.| .++..|..++++|++++++||+++++++++|++..+++++|+|||++++|+++||||||||.|++||+
T Consensus 98 ------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~ 171 (917)
T COG0474 98 ------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDV 171 (917)
T ss_pred ------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCc
Confidence 66 56668889999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccceeEEecCCeEEEecCCCCCCceeecCC--------------CCceeeceeEeeccEEEEEEEeCchhhHHhHHHhh
Q 041450 164 VPADARLLEGDPLKIDQAALTGESLPVTKNP--------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 229 (949)
Q Consensus 164 IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~--------------g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~ 229 (949)
||||++|+++++++||||+|||||+|+.|.+ .|++|+||.+.+|++.|+|++||.+|++|+++.++
T Consensus 172 vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~ 251 (917)
T COG0474 172 VPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLL 251 (917)
T ss_pred cccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhh
Confidence 9999999999888999999999999999963 47899999999999999999999999999999999
Q ss_pred hcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhh
Q 041450 230 DST-NQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 308 (949)
Q Consensus 230 ~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~ 308 (949)
... ...+++|+.+++++.+++.+.+++.++.+++.++..+.++...+..+++++++++|++||+.+++++++|+.+|++
T Consensus 252 ~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 252 PTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 988 6899999999999988766555544444444433334448899999999999999999999999999999999999
Q ss_pred CCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCCC---------hHHHHHHHHHhcccc--------
Q 041450 309 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTD---------SDGLLLAAARASRVE-------- 371 (949)
Q Consensus 309 ~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~---------~~~~l~~~a~~~~~~-------- 371 (949)
+++++|+++++|+||++++||||||||||+|+|+|.++++.......+ ...++..+++|++..
T Consensus 332 ~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~ 411 (917)
T COG0474 332 DNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQ 411 (917)
T ss_pred ccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCcee
Confidence 999999999999999999999999999999999999998752111122 113567777887543
Q ss_pred CCChhHHHHHHhccC------hhhhhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcC-------c
Q 041450 372 NQDAIDASIVGMLAD------PKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGL-------K 438 (949)
Q Consensus 372 ~~~~~~~ai~~~~~~------~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-------~ 438 (949)
.+||.|.|++..+.+ .......+++++.+||+|+||||++++++.+|+++.++|||||.|+++|+. .
T Consensus 412 ~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 412 AGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 359999999998753 344555667899999999999999999977888999999999999999973 4
Q ss_pred hHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccc----cCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcC
Q 041450 439 GEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTK----ESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITG 514 (949)
Q Consensus 439 ~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~----~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTG 514 (949)
++.++.+.+..++|+++|||++++|||..+..+. +..|++++|+|+++++||||+|++++|+.|++|||++||+||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 5667888999999999999999999998866544 678999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccC
Q 041450 515 DQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVND 594 (949)
Q Consensus 515 D~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND 594 (949)
||+.||++||++||+..+.....+++|.+.+ .++++++.+.+++.+||||+||+||.++|+.+|++||+|+|||||+||
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~-~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvND 650 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELD-ALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVND 650 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhh-hcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchh
Confidence 9999999999999997654333355565544 566778999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCceeEec-cchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cc-C
Q 041450 595 APALKRADIGIAVA-DATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALL-WK-F 671 (949)
Q Consensus 595 ~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~~~~-~~-~ 671 (949)
+||||+|||||||+ +|+|+||+|||+++++++|.+|+.++++||++|+|++|++.|.+++|+..++.++++.++ .+ +
T Consensus 651 apALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~ 730 (917)
T COG0474 651 APALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFL 730 (917)
T ss_pred HHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999998 799999999999999999999999999999999999999999999999866666555444 44 6
Q ss_pred CCChHHHHHHHHhhhcc-hhccccCCC------CCCCCCCc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 041450 672 DFPPFMILIIAILNDGT-IMTISKDRV------KPSPMPDS--WKLKEIFGTGVVLGTYMALVTAFFFWLIHDTRFFTNT 742 (949)
Q Consensus 672 ~~~~~~il~i~i~~~~~-~~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 742 (949)
||+|+|++|+|+++|.+ +++++.+++ +|++.|.. |+.+.++.+.+..|...+++.++.|.+.+.... ...
T Consensus 731 p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~-~~~ 809 (917)
T COG0474 731 PLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFI-ANT 809 (917)
T ss_pred cHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccc
Confidence 89999999999999986 678877652 22234555 777777777888788888888776666653211 111
Q ss_pred cCcccccCchhHHHHHHHHHHHHHHHHHhhhhccCCCCcccC---hhHHHHHHHHHHHHHHHHHHH
Q 041450 743 FNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVER---PGVMLVGAFLVAQLLATIIAV 805 (949)
Q Consensus 743 ~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~ 805 (949)
.+... ......+..|+.+++++++..+..|+.+.+|++. +++.+++++++..++..++.+
T Consensus 810 ~~~~~---~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~ 872 (917)
T COG0474 810 LGLDL---FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIF 872 (917)
T ss_pred cchhh---HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHH
Confidence 11100 1556789999999999999999999987655544 566666666666666555543
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-127 Score=1183.54 Aligned_cols=815 Identities=25% Similarity=0.391 Sum_probs=679.4
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHHcC----C
Q 041450 15 DLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKK-ESKLLKFLGFMWNPLSWVMEAAAIMAIVLANG----G 89 (949)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~ail~~~l~~~----~ 89 (949)
..|..+.+|+++.|+++.+|||++|+++|+++||+|+++.++ .++|+.|+++|++|+.++++++++++++++.. .
T Consensus 26 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~ 105 (903)
T PRK15122 26 REAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRR 105 (903)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccC
Confidence 456889999999999999999999999999999999999766 56889999999999999999999999997521 1
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCC------eEEEEeccccCCCcEEEEcCCCe
Q 041450 90 GKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDE------KWSEQEAEILVPGDIISIKLGDI 163 (949)
Q Consensus 90 ~~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg------~~~~i~~~~Lv~GDiV~l~~Gd~ 163 (949)
+...+|.++++|+++++++..+++++|++++++.++|++..+++++|+||| ++++|+++||||||+|.|++||+
T Consensus 106 ~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~ 185 (903)
T PRK15122 106 GEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDM 185 (903)
T ss_pred CccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCE
Confidence 233589999999999999999999999999999999999999999999994 89999999999999999999999
Q ss_pred eccceeEEecCCeEEEecCCCCCCceeecCC-----------------------CCceeeceeEeeccEEEEEEEeCchh
Q 041450 164 VPADARLLEGDPLKIDQAALTGESLPVTKNP-----------------------GDEVFSGSTCKQGEIEAVVIATGVHT 220 (949)
Q Consensus 164 IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~-----------------------g~~v~aGs~v~~G~~~~~Vi~tG~~T 220 (949)
|||||+|++|+.+.||||+|||||.|+.|.+ +|++|+||.|.+|+++++|++||.+|
T Consensus 186 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T 265 (903)
T PRK15122 186 IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265 (903)
T ss_pred EeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence 9999999999889999999999999999975 37899999999999999999999999
Q ss_pred hHHhHHHhhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHH
Q 041450 221 FFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 300 (949)
Q Consensus 221 ~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~ 300 (949)
.+||+++++.+....+++|+.++++...+..+..+++.+. ++...+...++.+++..++++++++|||+||++++++++
T Consensus 266 ~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v-~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La 344 (903)
T PRK15122 266 YFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVV-LLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLA 344 (903)
T ss_pred HhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 9999999998766678999999988876543332222221 112223456788899999999999999999999999999
Q ss_pred HHHHHHhhCCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccc--cCCChhHH
Q 041450 301 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRV--ENQDAIDA 378 (949)
Q Consensus 301 ~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~~~~~~~ 378 (949)
.|+.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+.+. ..+.+.++++.+++.++.. ..+||++.
T Consensus 345 ~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~ 421 (903)
T PRK15122 345 KGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQ 421 (903)
T ss_pred HHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHH
Confidence 999999999999999999999999999999999999999999998652 2234456677776654332 24599999
Q ss_pred HHHHhccChh--hhhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcC----------chHHHHHHH
Q 041450 379 SIVGMLADPK--EARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGL----------KGEMRRKAH 446 (949)
Q Consensus 379 ai~~~~~~~~--~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~ 446 (949)
|++.++.... .....++.++.+||++.+|+|++++++.+|+++.++|||||.++++|.. +++.++++.
T Consensus 422 All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 501 (903)
T PRK15122 422 AVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLL 501 (903)
T ss_pred HHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHH
Confidence 9998875321 2234678889999999999999999877888899999999999999963 233456677
Q ss_pred HHHHHHHHhcCeEEEEEEeecCCccc-----cCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHH
Q 041450 447 QIIDNFAERGLRALGVGRQTVPEKTK-----ESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGK 521 (949)
Q Consensus 447 ~~i~~~a~~GlR~l~~a~~~~~~~~~-----~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~ 521 (949)
+.+++++++|+|++++||+.++.++. +..|++++|+|+++++||||||++++|++|+++||+|+|+||||+.||.
T Consensus 502 ~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~ 581 (903)
T PRK15122 502 ALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTA 581 (903)
T ss_pred HHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 88899999999999999998765331 2357899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcC
Q 041450 522 ETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRA 601 (949)
Q Consensus 522 ~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~A 601 (949)
++|+++||.. ...+.|.+.+ .++++++.+.+++.++|||++|+||+++|+.||++|++|+|+|||+||+||||+|
T Consensus 582 aIA~~lGI~~----~~vi~G~el~-~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~A 656 (903)
T PRK15122 582 KICREVGLEP----GEPLLGTEIE-AMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDA 656 (903)
T ss_pred HHHHHcCCCC----CCccchHhhh-hCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhC
Confidence 9999999953 2455565544 6788899999999999999999999999999999999999999999999999999
Q ss_pred CceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCChHHHHH
Q 041450 602 DIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALLWK-FDFPPFMILI 680 (949)
Q Consensus 602 dVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~~~~~~-~~~~~~~il~ 680 (949)
|||||||+|+|+||++||+||++++|++|+.++++||++|+||+|++.|.++.|+..++..++..++.+ +|++|+|++|
T Consensus 657 DVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~ 736 (903)
T PRK15122 657 DVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLL 736 (903)
T ss_pred CEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987766655555555 7899999999
Q ss_pred HHHhhhcchhccccCCCCCCC--CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCcccccCchhHHHHH
Q 041450 681 IAILNDGTIMTISKDRVKPSP--MPDSWKLKEIFGTGVVLGTYMALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAA 758 (949)
Q Consensus 681 i~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~ 758 (949)
+|+++|.+.+++++|+++++. +|.+|+.+.+-..++..|.+.+++++..|++.+.. +. .+.. ......++.
T Consensus 737 ~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~--~~~~---~~~~~~~t~ 809 (903)
T PRK15122 737 QNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV--FA--ANSV---EMQALFQSG 809 (903)
T ss_pred HHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hc--cCcH---hhhhhhHHH
Confidence 999999889999999998775 78888877666666667888777777666553311 10 1100 000124577
Q ss_pred HHHHHHHHHHHHhhhhccCC-CCcccChhHHHHHHHHHHHHHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHhH
Q 041450 759 LYLQVSIISQALIFVTRSRS-WSFVERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLD 837 (949)
Q Consensus 759 ~~~~~~~~~~~~~~~~r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (949)
.|+.+.+++.+++|+.|+++ ++|.+++.+..+++.++.+++.++++....-.++++.+.++..|++++.++++++++.+
T Consensus 810 ~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e 889 (903)
T PRK15122 810 WFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQ 889 (903)
T ss_pred HHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999987 44554454554554444444444433200012346677788878887888888888888
Q ss_pred HHHHHHHh
Q 041450 838 PLKFVIRY 845 (949)
Q Consensus 838 ~~k~~~r~ 845 (949)
+.|.+.++
T Consensus 890 ~~k~~~~r 897 (903)
T PRK15122 890 GMKRFYIR 897 (903)
T ss_pred HHHHHHhh
Confidence 88854333
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-127 Score=1196.41 Aligned_cols=821 Identities=26% Similarity=0.367 Sum_probs=671.3
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHHcCC
Q 041450 12 ENVDLERIPVAEVFEQLKCT-PKGLTTAEGEKRLQIFGYNKLEEKK-ESKLLKFLGFMWNPLSWVMEAAAIMAIVLANGG 89 (949)
Q Consensus 12 ~~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~ail~~~l~~~~ 89 (949)
|--|||..+.+|+.+.|+++ .+|||++|+++|+++||+|+++.++ .++|..|+++|++|+.++++++++++++++
T Consensus 3 ~~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--- 79 (1053)
T TIGR01523 3 EFNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--- 79 (1053)
T ss_pred CCCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh---
Confidence 34589999999999999998 5899999999999999999999865 678999999999999999999999999986
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCeecccee
Q 041450 90 GKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADAR 169 (949)
Q Consensus 90 ~~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ 169 (949)
+|.++++|++++++|+.++++||+++++++++|++..+++++|+|||++++|+++||||||||.|++||+|||||+
T Consensus 80 ----~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 80 ----DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ----hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEEecCCCCCCceeecCCC---------------CceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhccC-
Q 041450 170 LLEGDPLKIDQAALTGESLPVTKNPG---------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN- 233 (949)
Q Consensus 170 ll~g~~~~Vdes~LTGEs~pv~K~~g---------------~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~~- 233 (949)
|++++++.||||+|||||.|+.|.++ |++|+||.|.+|++.++|++||.+|.+||+++++.+..
T Consensus 156 Li~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~ 235 (1053)
T TIGR01523 156 LIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGG 235 (1053)
T ss_pred EEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhh
Confidence 99998899999999999999999742 57899999999999999999999999999999885431
Q ss_pred -----------------------------------CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHH
Q 041450 234 -----------------------------------QVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDN 278 (949)
Q Consensus 234 -----------------------------------~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~ 278 (949)
..+|+|+.+++++.++.++.++..++.++..+ + ..+...+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~-~--~~~~~~~~~ 312 (1053)
T TIGR01523 236 LFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK-F--DVDKEVAIY 312 (1053)
T ss_pred ccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--hhhHHHHHH
Confidence 13899999999988754433332222222111 1 112456677
Q ss_pred HHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEee---c---c
Q 041450 279 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEV---F---V 352 (949)
Q Consensus 279 ~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~---~---~ 352 (949)
.++++++++|++||+++++++++|++||+++++++|+++++|+||++++||+|||||||+|+|+|.+++... + .
T Consensus 313 av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~ 392 (1053)
T TIGR01523 313 AICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDN 392 (1053)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecC
Confidence 889999999999999999999999999999999999999999999999999999999999999999876421 0 0
Q ss_pred --CCC---------------------------------------C---------hHHHHHHHHHhcccc-----------
Q 041450 353 --KGT---------------------------------------D---------SDGLLLAAARASRVE----------- 371 (949)
Q Consensus 353 --~~~---------------------------------------~---------~~~~l~~~a~~~~~~----------- 371 (949)
.++ + ..+++..++.|+...
T Consensus 393 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~ 472 (1053)
T TIGR01523 393 SDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK 472 (1053)
T ss_pred CCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee
Confidence 000 0 023555666665321
Q ss_pred -CCChhHHHHHHhccCh----------hhh-------------------hcCceEEeeccCCCCCccEEEEEEcCCC-cE
Q 041450 372 -NQDAIDASIVGMLADP----------KEA-------------------RAGITEVHFLPFNPVDKRTAITYIDSNG-DW 420 (949)
Q Consensus 372 -~~~~~~~ai~~~~~~~----------~~~-------------------~~~~~~l~~~pF~s~~kr~sv~~~~~~g-~~ 420 (949)
.+||.|.|++.++... .+. ...++.++.+||+|.+|||+++++++++ ++
T Consensus 473 ~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~ 552 (1053)
T TIGR01523 473 AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETY 552 (1053)
T ss_pred eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEE
Confidence 2489999998875311 011 2347789999999999999999987655 47
Q ss_pred EEEecCchHHHHHhhcC------------chHHHHHHHHHHHHHHHhcCeEEEEEEeecCCcc------------ccCCC
Q 041450 421 HRTSKGAPEQIIDLCGL------------KGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKT------------KESEG 476 (949)
Q Consensus 421 ~~~~KGa~e~il~~~~~------------~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~------------~~~~e 476 (949)
++++|||||.|+++|.. +++.++++.+.+++|+++|+|||++|||.+++++ .+..|
T Consensus 553 ~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e 632 (1053)
T TIGR01523 553 NIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAE 632 (1053)
T ss_pred EEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhc
Confidence 89999999999999962 2334677888899999999999999999886532 23457
Q ss_pred CCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--------CCccccCCcccccc
Q 041450 477 SPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMY--------PSSSLLGQSKDESI 548 (949)
Q Consensus 477 ~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~--------~~~~l~~~~~~~~~ 548 (949)
++|+|+|+++++||||+|++++|++|+++||+|+|+|||++.||.++|++|||.+... ...+++|.+.+ .+
T Consensus 633 ~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~-~l 711 (1053)
T TIGR01523 633 SDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD-AL 711 (1053)
T ss_pred cCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhh-hc
Confidence 8999999999999999999999999999999999999999999999999999964310 12345555443 56
Q ss_pred CCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEec-cchHHHHhcccccccCCCh
Q 041450 549 ASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVA-DATDAARSASDIVLTEPGL 627 (949)
Q Consensus 549 ~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~l 627 (949)
+++++++++++..||||++|+||.++|+.+|++|++|+|+|||+||+||||+|||||||| +|+|+|+++||++|++++|
T Consensus 712 ~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred CHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCH
Confidence 777888899999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------cCCCChHHHHHHHHhhhcc-hhccccCCCCCC
Q 041450 628 SVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALLW------KFDFPPFMILIIAILNDGT-IMTISKDRVKPS 700 (949)
Q Consensus 628 ~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~~~~~------~~~~~~~~il~i~i~~~~~-~~~~~~~~~~~~ 700 (949)
++|+.++.+||++|+|+++++.|.+++|+..++.+++..++. ++||+|+|++|+|+++|.+ ++++++|++.+.
T Consensus 792 ~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~ 871 (1053)
T TIGR01523 792 ASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPD 871 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChh
Confidence 999999999999999999999999999998777766655542 3688999999999999865 799999887554
Q ss_pred -----CC--CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccc----ccccCcccccCchhHHHHHHHHHHHHH
Q 041450 701 -----PM--PDSWKLKEIFGTGVVLGTYMALVTAFFFWLIHDT---RFF----TNTFNLKEIHEKPDMLSAALYLQVSII 766 (949)
Q Consensus 701 -----~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~----~~~~g~~~~~~~~~~~~t~~~~~~~~~ 766 (949)
|+ .++...+.++..++++|++++++++..|++.++. +.. ...++.. . ....+.+|+.|.+++++
T Consensus 872 ~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~a~t~~f~~l~~~ 949 (1053)
T TIGR01523 872 LMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAG-C-NDVFKARSAAFATMTFC 949 (1053)
T ss_pred HHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccccccccc-c-cchhhhHHHHHHHHHHH
Confidence 11 1233345666677888999999888776644321 000 0001100 0 12345789999999999
Q ss_pred HHHHhhhhccCCCCccc------------------ChhHHHHHHHHHHHHHHHHHHHhhc-c--cccccCchhHHHHHHH
Q 041450 767 SQALIFVTRSRSWSFVE------------------RPGVMLVGAFLVAQLLATIIAVYAK-W--EFARIEGIGWGWAGAI 825 (949)
Q Consensus 767 ~~~~~~~~r~~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~ 825 (949)
+.++++++|+.+.+.+. ..|.+++++++++.++..++ +|.+ . ..+++.+.+|.|++ +
T Consensus 950 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~-~~~p~~~~~~f~~~~l~~~w~~-~ 1027 (1053)
T TIGR01523 950 ALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPT-IYIPVINDDVFKHKPIGAEWGL-A 1027 (1053)
T ss_pred HHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHH-HhhhhhhhhhhccCCcchHHHH-H
Confidence 99999999986533111 13457777777776665444 4433 2 25667777786655 5
Q ss_pred HHHHHHHHHHhHHHHHHHHhhc
Q 041450 826 WIFSIITYLPLDPLKFVIRYAQ 847 (949)
Q Consensus 826 ~~~~~~~~~~~~~~k~~~r~~~ 847 (949)
+.++++.++..++.|+++|++.
T Consensus 1028 ~~~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1028 AAATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 7888888899999998876553
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-126 Score=1177.04 Aligned_cols=807 Identities=25% Similarity=0.386 Sum_probs=672.7
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCC
Q 041450 14 VDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKK-ESKLLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKP 92 (949)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~ail~~~l~~~~~~~ 92 (949)
.+.|..+.+++++.|+++.+|||++|+++|+++||+|++++++ .++|+.|+++|++|++++++++++++++++
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------ 86 (867)
T TIGR01524 13 LKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------ 86 (867)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh------
Confidence 3456889999999999999999999999999999999998876 468899999999999999999999999875
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEe------CCeEEEEeccccCCCcEEEEcCCCeecc
Q 041450 93 PDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLR------DEKWSEQEAEILVPGDIISIKLGDIVPA 166 (949)
Q Consensus 93 ~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~r------dg~~~~i~~~~Lv~GDiV~l~~Gd~IPa 166 (949)
+|.++++|+++++++..+++++|++++++.++|++..+++++|+| ||++++|+++||||||+|.|++||+|||
T Consensus 87 -~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 -DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred -hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 899999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ceeEEecCCeEEEecCCCCCCceeecCCCC-------------ceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhccC
Q 041450 167 DARLLEGDPLKIDQAALTGESLPVTKNPGD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 233 (949)
Q Consensus 167 D~~ll~g~~~~Vdes~LTGEs~pv~K~~g~-------------~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~~ 233 (949)
||+|++|+++.||||+|||||.|+.|.+|+ .+|+||.|.+|+++++|++||.+|.+||+++++.+..
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~ 245 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERR 245 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCC
Confidence 999999988999999999999999999874 6999999999999999999999999999999998866
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCccc
Q 041450 234 QVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 313 (949)
Q Consensus 234 ~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~v 313 (949)
+++++|+.++++++++..++++...+. ++.+.+...++.+++..++++++++|||+||++++++++.++++|+++|+++
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilv 324 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVV-LMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIV 324 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHh-eehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEE
Confidence 778999999999987655444333222 2233334567888999999999999999999999999999999999999999
Q ss_pred ccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhcccc--CCChhHHHHHHhccCh--hh
Q 041450 314 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVE--NQDAIDASIVGMLADP--KE 389 (949)
Q Consensus 314 k~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~--~~~~~~~ai~~~~~~~--~~ 389 (949)
|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++..++.++... .+||+|.|++.++.+. ..
T Consensus 325 k~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~ 401 (867)
T TIGR01524 325 KELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQ 401 (867)
T ss_pred ccchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhh
Confidence 99999999999999999999999999999998642 23445667777776654432 3599999999877532 22
Q ss_pred hhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcC----------chHHHHHHHHHHHHHHHhcCeE
Q 041450 390 ARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGL----------KGEMRRKAHQIIDNFAERGLRA 459 (949)
Q Consensus 390 ~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~ 459 (949)
.+..++.++.+||+|.+|+|++++.+.++.++.++||+||.++++|+. +++.++++.+.+++++++|+|+
T Consensus 402 ~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 481 (867)
T TIGR01524 402 TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRV 481 (867)
T ss_pred HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 345678889999999999999998876666789999999999999963 2344567788889999999999
Q ss_pred EEEEEeecCCccc---cCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC
Q 041450 460 LGVGRQTVPEKTK---ESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 536 (949)
Q Consensus 460 l~~a~~~~~~~~~---~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~ 536 (949)
+++||++++.++. +..|++|+|+|+++++||||+|++++|++|+++||+|+|+|||++.||.++|+++||..+
T Consensus 482 lavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~---- 557 (867)
T TIGR01524 482 IAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN---- 557 (867)
T ss_pred EEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC----
Confidence 9999998865432 124788999999999999999999999999999999999999999999999999999632
Q ss_pred ccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHh
Q 041450 537 SSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARS 616 (949)
Q Consensus 537 ~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~ 616 (949)
..+.|.+. +.++++++.+.+++.++|||++|+||+++|+.+|++|++|+|+|||+||+||||+||||||||+|+|+||+
T Consensus 558 ~v~~g~~l-~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~ 636 (867)
T TIGR01524 558 DFLLGADI-EELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKE 636 (867)
T ss_pred CeeecHhh-hhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHH
Confidence 34555544 35677889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCChHHHHHHHHhhhcchhccccC
Q 041450 617 ASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALLWK-FDFPPFMILIIAILNDGTIMTISKD 695 (949)
Q Consensus 617 aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~~~~~~-~~~~~~~il~i~i~~~~~~~~~~~~ 695 (949)
+||+||++++|++|+.++++||++|+||+|++.|.++.|+..++.+++..++.+ +|++|+|++|+|+++|++++++++|
T Consensus 637 aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~ 716 (867)
T TIGR01524 637 ASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWD 716 (867)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999987777666665555 7999999999999999889999999
Q ss_pred CCCCCC--CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCcccccCchhHHHHHHHHHHHHHHHHHhhh
Q 041450 696 RVKPSP--MPDSWKLKEIFGTGVVLGTYMALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFV 773 (949)
Q Consensus 696 ~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 773 (949)
+++++. +|.+|+.+.+...+++.|++.+++++..|++++..... . + . ......++..|+.+.+++.+++|+
T Consensus 717 ~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~--~---~-~~~~~~~t~~f~~~~~~~~~~~~~ 789 (867)
T TIGR01524 717 KMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFSA-N--T---V-EEQALFQSGWFVVGLLSQTLVVHM 789 (867)
T ss_pred CCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-c--c---h-hhhhHHHHHHHHHHHHHHHHHHHh
Confidence 998874 56678887788788888998888777666654321100 0 0 0 012234678899999999999999
Q ss_pred hccCC-CCcccChhHHHHHHHHHHHHHHHHHHHhhcccccccCchhHH--HHHHHHHHHHHHHHHhHHHHHHHHh
Q 041450 774 TRSRS-WSFVERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWG--WAGAIWIFSIITYLPLDPLKFVIRY 845 (949)
Q Consensus 774 ~r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~k~~~r~ 845 (949)
+|+++ ++|.+++.+..+++.++.+++.+.++..+.-.++++.+.++. -|+++++++.+ ++.++.|.+..+
T Consensus 790 ~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~~~ 862 (867)
T TIGR01524 790 IRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFYIR 862 (867)
T ss_pred hCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 99987 445544444444444444444333322100123345544333 23333444433 567887765443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-122 Score=1160.19 Aligned_cols=832 Identities=22% Similarity=0.353 Sum_probs=679.0
Q ss_pred ccccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHHcC
Q 041450 11 NENVDLERIPVAEVFEQLKCT-PKGLTTAEGEKRLQIFGYNKLEEKK-ESKLLKFLGFMWNPLSWVMEAAAIMAIVLANG 88 (949)
Q Consensus 11 ~~~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~ail~~~l~~~ 88 (949)
+...|||..+.+++++.|+++ .+|||++|+++|+++||+|++++++ .++|+.|+++|++|++++++++++++++....
T Consensus 12 ~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~ 91 (997)
T TIGR01106 12 EVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGI 91 (997)
T ss_pred hccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 346899999999999999998 6799999999999999999998755 56889999999999999999999998875321
Q ss_pred ------CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCC
Q 041450 89 ------GGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGD 162 (949)
Q Consensus 89 ------~~~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd 162 (949)
.....+|.+++++++++++++.+++++|+|+++++++|++..+++++|+|||++++|+++||||||+|.|++||
T Consensus 92 ~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd 171 (997)
T TIGR01106 92 QASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGD 171 (997)
T ss_pred hhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCC
Confidence 11234789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccceeEEecCCeEEEecCCCCCCceeecCCCC----------ceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhcc
Q 041450 163 IVPADARLLEGDPLKIDQAALTGESLPVTKNPGD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 232 (949)
Q Consensus 163 ~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~----------~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~ 232 (949)
+|||||++++|+.+.||||+|||||.|+.|.+++ .+|+||.|.+|++.++|++||.+|.+||+++++++.
T Consensus 172 ~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 251 (997)
T TIGR01106 172 RIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGL 251 (997)
T ss_pred EEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhc
Confidence 9999999999987999999999999999998864 799999999999999999999999999999988765
Q ss_pred -CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCc
Q 041450 233 -NQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 311 (949)
Q Consensus 233 -~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i 311 (949)
.+++++++.++++...+...+++..++ +++.+...+.++.+.+..++++++++|||+||++++++++.++++|+++|+
T Consensus 252 ~~~~~pl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~i 330 (997)
T TIGR01106 252 ENGKTPIAIEIEHFIHIITGVAVFLGVS-FFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNC 330 (997)
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCc
Confidence 467999999999988765444332222 223333456778888999999999999999999999999999999999999
Q ss_pred ccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeecc---CC--------CC-----hHHHHHHHHHhcccc----
Q 041450 312 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFV---KG--------TD-----SDGLLLAAARASRVE---- 371 (949)
Q Consensus 312 ~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~---~~--------~~-----~~~~l~~~a~~~~~~---- 371 (949)
++|+++++|+||++++||||||||||+|+|+|.++++.... .+ .+ .+.++..++.|++..
T Consensus 331 lvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~ 410 (997)
T TIGR01106 331 LVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAG 410 (997)
T ss_pred EecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccc
Confidence 99999999999999999999999999999999998742110 00 11 124666677775421
Q ss_pred -----------CCChhHHHHHHhcc----ChhhhhcCceEEeeccCCCCCccEEEEEEcC---CCcEEEEecCchHHHHH
Q 041450 372 -----------NQDAIDASIVGMLA----DPKEARAGITEVHFLPFNPVDKRTAITYIDS---NGDWHRTSKGAPEQIID 433 (949)
Q Consensus 372 -----------~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~---~g~~~~~~KGa~e~il~ 433 (949)
.+||.|.|++.++. +..+.+..++.++.+||+|++|||++++... ++++++++|||||.|++
T Consensus 411 ~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~ 490 (997)
T TIGR01106 411 QENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILE 490 (997)
T ss_pred cCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHH
Confidence 24899999998763 3344566788999999999999999887632 24678999999999999
Q ss_pred hhcC----------chHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccc-----------cCCCCCceEEEEEecCCCCC
Q 041450 434 LCGL----------KGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTK-----------ESEGSPWEFVGLLPLFDPPR 492 (949)
Q Consensus 434 ~~~~----------~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~-----------~~~e~~l~llG~~~i~D~lr 492 (949)
+|+. +++.++.+.+.+++|+++|+||+++||+.+++++. +..|++|+|+|+++++||||
T Consensus 491 ~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr 570 (997)
T TIGR01106 491 RCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPR 570 (997)
T ss_pred HhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCCh
Confidence 9952 23456778888999999999999999998865321 12378999999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC----------------------CccccCCccccccCC
Q 041450 493 HDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSLLGQSKDESIAS 550 (949)
Q Consensus 493 ~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~----------------------~~~l~~~~~~~~~~~ 550 (949)
+|++++|++|+++||+++|+|||++.||.++|+++|+..+... ..++.|.+. +.+++
T Consensus 571 ~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l-~~l~~ 649 (997)
T TIGR01106 571 AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDL-KDMTS 649 (997)
T ss_pred HHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHh-hhCCH
Confidence 9999999999999999999999999999999999999643210 123444433 34566
Q ss_pred chHHHHhHhcc--eEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEec-cchHHHHhcccccccCCCh
Q 041450 551 MPVEELIEKAD--GFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVA-DATDAARSASDIVLTEPGL 627 (949)
Q Consensus 551 ~~~~~~~~~~~--v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~l 627 (949)
+++++++.+.. ||||++|+||+++|+.+|++|++|+|+|||+||+||||+|||||||| +|+|+|+++||++|++|+|
T Consensus 650 ~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f 729 (997)
T TIGR01106 650 EQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNF 729 (997)
T ss_pred HHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCH
Confidence 77888888765 99999999999999999999999999999999999999999999999 7999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCChHHHHHHHHhhhcc-hhccccCCCCCCC---C
Q 041450 628 SVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALL-WKFDFPPFMILIIAILNDGT-IMTISKDRVKPSP---M 702 (949)
Q Consensus 628 ~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~~~~-~~~~~~~~~il~i~i~~~~~-~~~~~~~~~~~~~---~ 702 (949)
++|+.++++||++|.|+++++.|.++.|+..++..+++.++ .+.|++|+|++|+|+++|.+ +++++++++.+.. +
T Consensus 730 ~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~ 809 (997)
T TIGR01106 730 ASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQ 809 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCC
Confidence 99999999999999999999999999999877666655544 55689999999999999985 7999998876542 2
Q ss_pred CCch-----hhHHHH-HHHHHHHHHHHHHHHHHHHHHHh-hccccc-ccCc---------ccccCc-------------h
Q 041450 703 PDSW-----KLKEIF-GTGVVLGTYMALVTAFFFWLIHD-TRFFTN-TFNL---------KEIHEK-------------P 752 (949)
Q Consensus 703 ~~~~-----~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~-~~g~---------~~~~~~-------------~ 752 (949)
|..+ ..+..+ .+.+..|+++++..+++|++.+. .+|... -++. .+..+. .
T Consensus 810 P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (997)
T TIGR01106 810 PRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVE 889 (997)
T ss_pred CcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchh
Confidence 3332 222233 44556699999888877665442 122111 0110 000000 0
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhccCCCC-c-ccChhHHHHHHHHHHHHHHHHHHHhhc--ccccccCchhHHHHHHHHHH
Q 041450 753 DMLSAALYLQVSIISQALIFVTRSRSWS-F-VERPGVMLVGAFLVAQLLATIIAVYAK--WEFARIEGIGWGWAGAIWIF 828 (949)
Q Consensus 753 ~~~~t~~~~~~~~~~~~~~~~~r~~~~~-~-~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 828 (949)
.+.+|++|..+.+++.++++++|+.+.+ | ...++++++.++++..++..++. |.+ -.++++.+.+|.+|+.++++
T Consensus 890 ~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~-~~p~~~~~f~~~~l~~~~w~~~~~~ 968 (997)
T TIGR01106 890 FTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLS-YCPGMGVALRMYPLKPTWWFCAFPY 968 (997)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHHH-HhhhhHHHhccccCCHHHHHHHHHH
Confidence 1468999999999999999999997643 2 23456677777776666655543 332 34556778888888888889
Q ss_pred HHHHHHHhHHHHHHHHh
Q 041450 829 SIITYLPLDPLKFVIRY 845 (949)
Q Consensus 829 ~~~~~~~~~~~k~~~r~ 845 (949)
+++.++..++.|+++|+
T Consensus 969 ~~~~~~~~~~~k~~~r~ 985 (997)
T TIGR01106 969 SLLIFVYDEIRKLIIRR 985 (997)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 98888888999988765
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-121 Score=1140.62 Aligned_cols=799 Identities=27% Similarity=0.399 Sum_probs=673.8
Q ss_pred ccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHHhcCCCcccccc-cchHHHHHHHH-HhHHHHHHHHHHHHHHHHHcCCC
Q 041450 15 DLERIPVAEVFEQLKCT-PKGLT-TAEGEKRLQIFGYNKLEEKK-ESKLLKFLGFM-WNPLSWVMEAAAIMAIVLANGGG 90 (949)
Q Consensus 15 ~~~~~~~~~~~~~l~~~-~~GLt-~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~-~~~~~~~l~~~ail~~~l~~~~~ 90 (949)
+||.++.+++++.|+++ .+||| ++|+++|+++||+|+++.++ .++|+.|+++| ++|++++++++++++++++
T Consensus 3 ~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g---- 78 (884)
T TIGR01522 3 QYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG---- 78 (884)
T ss_pred chhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc----
Confidence 68999999999999998 67999 99999999999999999765 67889999999 9999999999999999976
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCeeccceeE
Q 041450 91 KPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARL 170 (949)
Q Consensus 91 ~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~l 170 (949)
+|.+++.|+++++++..+++++|+++++++++|++..+++++|+|||++++|+++||||||+|.|++||+|||||+|
T Consensus 79 ---~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 ---NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred ---chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeEEEecCCCCCCceeecCCCC--------------ceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhcc-CCC
Q 041450 171 LEGDPLKIDQAALTGESLPVTKNPGD--------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQV 235 (949)
Q Consensus 171 l~g~~~~Vdes~LTGEs~pv~K~~g~--------------~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~-~~~ 235 (949)
++|+++.||||+|||||.|+.|.+++ .+|+||.|.+|++.++|++||.+|.+||+++++++. ..+
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 99977999999999999999999863 799999999999999999999999999999999876 467
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCccccc
Q 041450 236 GHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKR 315 (949)
Q Consensus 236 ~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~ 315 (949)
+++|+.+++++.++....++.+++.+++.| +.+.++.+++...+++++++|||+||++++++++.++++|+++|+++|+
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~ 314 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRK 314 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccc
Confidence 899999999998765443332322233333 3456788899999999999999999999999999999999999999999
Q ss_pred chhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccC----C--C-------------------ChHHHHHHHHHhccc
Q 041450 316 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVK----G--T-------------------DSDGLLLAAARASRV 370 (949)
Q Consensus 316 ~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~----~--~-------------------~~~~~l~~~a~~~~~ 370 (949)
++++|+||++++||||||||||+|+|+|.+++...... + . ...+++..++.|++.
T Consensus 315 ~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 394 (884)
T TIGR01522 315 LPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA 394 (884)
T ss_pred hHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCC
Confidence 99999999999999999999999999999886421000 0 0 113456666666543
Q ss_pred c--------CCChhHHHHHHhccCh--hhhhcCceEEeeccCCCCCccEEEEEEcC-CCcEEEEecCchHHHHHhhcC--
Q 041450 371 E--------NQDAIDASIVGMLADP--KEARAGITEVHFLPFNPVDKRTAITYIDS-NGDWHRTSKGAPEQIIDLCGL-- 437 (949)
Q Consensus 371 ~--------~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~~~~-- 437 (949)
. .+||+|.|++.++... +..+..++.++.+||+|.+|||+++++.. +++++.++|||||.|+.+|..
T Consensus 395 ~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~ 474 (884)
T TIGR01522 395 KFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQ 474 (884)
T ss_pred eecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhh
Confidence 2 2479999999886432 22344678899999999999999988753 577889999999999999963
Q ss_pred ---------chHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCe
Q 041450 438 ---------KGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVN 508 (949)
Q Consensus 438 ---------~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~ 508 (949)
+++.++++.+.+++++++|+|++++||+.+ +.+|+|+|+++++||||||++++|++|+++||+
T Consensus 475 ~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~ 546 (884)
T TIGR01522 475 KKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVR 546 (884)
T ss_pred hcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCe
Confidence 133456778888999999999999999875 457999999999999999999999999999999
Q ss_pred EEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEE
Q 041450 509 VKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMT 588 (949)
Q Consensus 509 v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~mi 588 (949)
++|+|||++.||.++|+++||.... ...+.|.+. +.++++++++.+.+..+|||++|+||.++|+.+|++|++|+|+
T Consensus 547 v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v~g~~l-~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mv 623 (884)
T TIGR01522 547 IIMITGDSQETAVSIARRLGMPSKT--SQSVSGEKL-DAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMT 623 (884)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCC--CceeEhHHh-HhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEE
Confidence 9999999999999999999997532 234444443 3567788999999999999999999999999999999999999
Q ss_pred cCCccCHHhhhcCCceeEec-cchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 041450 589 GDGVNDAPALKRADIGIAVA-DATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL-VA 666 (949)
Q Consensus 589 GDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~-~~ 666 (949)
|||+||+|||++|||||||| +|+|+|+++||+++++|+|+.++.++++||++|+|+++++.|.++.|+..++.+++ ..
T Consensus 624 GDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~ 703 (884)
T TIGR01522 624 GDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATL 703 (884)
T ss_pred CCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999999999999999998 79999999999999999999999999999999999999999999999976655444 34
Q ss_pred hhccCCCChHHHHHHHHhhhcc-hhccccCCCCCC---CCCC----chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 041450 667 LLWKFDFPPFMILIIAILNDGT-IMTISKDRVKPS---PMPD----SWKLKEIFGTGVVLGTYMALVTAFFFWLIHDTRF 738 (949)
Q Consensus 667 ~~~~~~~~~~~il~i~i~~~~~-~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 738 (949)
+..+.|++|+|++|+++++|.+ +++++++++++. .+|. +...+.++...+++|+++++++++.|+..+..
T Consensus 704 ~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-- 781 (884)
T TIGR01522 704 MGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD-- 781 (884)
T ss_pred HcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--
Confidence 4567899999999999999987 689999887544 1233 23335667777888999988877666543311
Q ss_pred cccccCcccccCchhHHHHHHHHHHHHHHHHHhhhhccCCCCccc---ChhHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 041450 739 FTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVE---RPGVMLVGAFLVAQLLATIIAVYAK--WEFAR 813 (949)
Q Consensus 739 ~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 813 (949)
+ ......+|++|..+++++.++.|++|+.+.+++. ..|+++++++++..++..++ +|.+ -.+++
T Consensus 782 -----~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~p~~~~~f~ 850 (884)
T TIGR01522 782 -----G-----VITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLV-IYFPPLQSVFQ 850 (884)
T ss_pred -----C-----cchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHc
Confidence 1 0224467999999999999999999997654332 23456676766666655444 3322 23456
Q ss_pred cCchhHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 041450 814 IEGIGWGWAGAIWIFSIITYLPLDPLKFVIRY 845 (949)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~ 845 (949)
+.+.+|..|+.+++++++.++..++.|+++|.
T Consensus 851 ~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 851 TEALSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 77788888888899999999999999988664
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-121 Score=1143.87 Aligned_cols=816 Identities=21% Similarity=0.320 Sum_probs=664.1
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHHhcCCCccccccc-chHHHHHHHHHhHHHHHHHHHHHHHHHHHcC------C
Q 041450 20 PVAEVFEQLKCT-PKGLT--TAEGEKRLQIFGYNKLEEKKE-SKLLKFLGFMWNPLSWVMEAAAIMAIVLANG------G 89 (949)
Q Consensus 20 ~~~~~~~~l~~~-~~GLt--~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~ail~~~l~~~------~ 89 (949)
..+++++.|+++ ++||| ++|+++|+++||+|+++.++. ++|..|+++|++|++++++++++++++++.. .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 788999999998 67999 999999999999999998865 6788899999999999999999999997621 2
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCeeccce
Q 041450 90 GKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAG-LAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADA 168 (949)
Q Consensus 90 ~~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~-~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~ 168 (949)
+...+|.++++|+++++++..+++++|++++++.++|++. .+++++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 3345899999999999999999999999999999999864 477999999999999999999999999999999999999
Q ss_pred eEEecCCeEEEecCCCCCCceeecCCCCc--eeeceeEeeccEEEEEEEeCchhhHHhHHHhhhccCCCChHHHHHHHHH
Q 041450 169 RLLEGDPLKIDQAALTGESLPVTKNPGDE--VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 246 (949)
Q Consensus 169 ~ll~g~~~~Vdes~LTGEs~pv~K~~g~~--v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~ 246 (949)
+|++|+.+.||||+|||||.|+.|.+++. +|+||.|.+|++.++|++||.+|.+||+++++....+++++++.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999889999999999999999998765 9999999999999999999999999999999987766779999999888
Q ss_pred HHHHHHHHHHHHHHHH---HHHHhc---c---------CcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCc
Q 041450 247 NFCICSIAVGMFIEII---VMWAIQ---R---------RSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 311 (949)
Q Consensus 247 ~~~~~~i~~~~~~~~~---~~~~~~---~---------~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i 311 (949)
.++...+++..++.++ +.|... + .++.+.+..++++++++|||+||++++++++.++.+|+++|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 7654332221111111 111111 1 246677888999999999999999999999999999999999
Q ss_pred ccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeecc---CC----CC--hHHHHHHHHHh-cccc----------
Q 041450 312 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFV---KG----TD--SDGLLLAAARA-SRVE---------- 371 (949)
Q Consensus 312 ~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~---~~----~~--~~~~l~~~a~~-~~~~---------- 371 (949)
++|+++++|+||++++||||||||||+|+|+|.+++..... .+ .+ ..+++..++.| +.+.
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 99999999999999999999999999999999998753210 00 00 12233333333 3221
Q ss_pred -CCChhHHHHHHhcc----ChhhhhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcCc--------
Q 041450 372 -NQDAIDASIVGMLA----DPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLK-------- 438 (949)
Q Consensus 372 -~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-------- 438 (949)
.+||.|.|++.++. +..+.+..++.++.+||+|.+|||+++++..+++++.++|||||.++++|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 24799999998764 33334456777889999999999999998777778999999999999999631
Q ss_pred --hHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccc---cCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEc
Q 041450 439 --GEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTK---ESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMIT 513 (949)
Q Consensus 439 --~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~---~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlT 513 (949)
.+.++++.+.+++++++|+|++++||+.++.++. +..|++|+|+|+++++||||+|++++|++|+++||+++|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 0135677888999999999999999999864432 33478999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCcc
Q 041450 514 GDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVN 593 (949)
Q Consensus 514 GD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~N 593 (949)
||++.||.++|++|||.++. ..++.|.+.+ .++++++++++.+.++|||++|+||.++|+.+|++|++|+|||||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~~--~~vi~G~~~~-~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTFG--GLAMEGKEFR-RLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCCC--ceEeeHHHhh-hCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 99999999999999997532 2345555443 56778899999999999999999999999999999999999999999
Q ss_pred CHHhhhcCCceeEec-cchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhccC
Q 041450 594 DAPALKRADIGIAVA-DATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL-VALLWKF 671 (949)
Q Consensus 594 D~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~-~~~~~~~ 671 (949)
|+||||+|||||||| +|+|+|+++||++|++|+|++|+.++++||++|+|+++++.|.+++|+..++..++ ..+..+.
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 99999999999999999999999999999999999999999999999976555444 4445677
Q ss_pred CCChHHHHHHHHhhhcc-hhccccCCCCCCC---CCCchh----hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 041450 672 DFPPFMILIIAILNDGT-IMTISKDRVKPSP---MPDSWK----LKEIFGTGVVLGTYMALVTAFFFWLIHDTRFFTNTF 743 (949)
Q Consensus 672 ~~~~~~il~i~i~~~~~-~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 743 (949)
|++|+|++|+++++|.+ +++++++++.+.. +|.+|+ .+.++..++.+|+++++++++.+++... ++.. .
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~-~ 836 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDV-S 836 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcc-c
Confidence 99999999999999975 7999988876542 343332 3566777888899999888877665431 2211 0
Q ss_pred Cccc-ccCchhHHHHHHHHHHHHHHHHHhhhhccCCC--Cccc-ChhHHHHHHHHHHHHHHHHHHHhhcccccccCchhH
Q 041450 744 NLKE-IHEKPDMLSAALYLQVSIISQALIFVTRSRSW--SFVE-RPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGW 819 (949)
Q Consensus 744 g~~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~--~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (949)
+... ........+|+.|.++++++.++.+++|+.+. +|.. ..+++++.++++..++..++..+. -..++..+.+|
T Consensus 837 ~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~-~~~f~~~~l~~ 915 (941)
T TIGR01517 837 GPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFG-GSFFSTVSLSI 915 (941)
T ss_pred CcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHHH-HHHhcccCCCH
Confidence 1000 00123456899999999999999999998652 2211 123455555555555544443332 23456777888
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHH
Q 041450 820 GWAGAIWIFSIITYLPLDPLKFV 842 (949)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~k~~ 842 (949)
..|+.+++++++.++..++.|++
T Consensus 916 ~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 916 EQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 88888888998888888888875
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-121 Score=1035.21 Aligned_cols=816 Identities=22% Similarity=0.310 Sum_probs=652.9
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHHhcCCCcccccccch-HHHHHHHHHhHHHHHHHHHHHHHHHHHcCC-CCCCC
Q 041450 20 PVAEVFEQLKCT-PKGLTT--AEGEKRLQIFGYNKLEEKKESK-LLKFLGFMWNPLSWVMEAAAIMAIVLANGG-GKPPD 94 (949)
Q Consensus 20 ~~~~~~~~l~~~-~~GLt~--~e~~~r~~~~G~N~i~~~~~~~-~~~~~~~~~~~~~~~l~~~ail~~~l~~~~-~~~~~ 94 (949)
-.+.++++|+++ .+||+. +|.++|++.||.|.+|+++++. |...++.+.+.-..++.++|++++.++... +.+..
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 388999999998 789987 8999999999999999988655 455578888888899999999999988643 44669
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCeeccceeEEec
Q 041450 95 WPDFVGIVVLLFINSTISFIEENNAGNAAAALMAG-LAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEG 173 (949)
Q Consensus 95 ~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~-~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 173 (949)
|++++.|++.+++..++....+|+.++..+.|++. ...+..|+|||+.++|+.-|||||||+.|+.||.|||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 99999998777666566666666666666666532 34578999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCCCCceeecCC--CCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhccC-CCChHHHHHHHHHHHH-
Q 041450 174 DPLKIDQAALTGESLPVTKNP--GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFC- 249 (949)
Q Consensus 174 ~~~~Vdes~LTGEs~pv~K~~--g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~- 249 (949)
+++.||||++||||.++.|.+ +.++++||++.+|.+.++|+++|.+|..|+++.++.... ..+++|-.+++++..+
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 568999999999999999999999999999999888775 8899999888876542
Q ss_pred --HHHHHHHHHHHHHHHHHhc-----cC---c--------HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCc
Q 041450 250 --ICSIAVGMFIEIIVMWAIQ-----RR---S--------YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 311 (949)
Q Consensus 250 --~~~i~~~~~~~~~~~~~~~-----~~---~--------~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i 311 (949)
-+.++...++.++..|+.. +. . +.+.+...+.++++++|++||+++++++++++++|.+++.
T Consensus 342 k~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 342 KIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 1122222222222333321 11 1 1122333455778899999999999999999999999999
Q ss_pred ccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCC--------CChH--HH-HHHHHHhccc----------
Q 041450 312 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKG--------TDSD--GL-LLAAARASRV---------- 370 (949)
Q Consensus 312 ~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~--------~~~~--~~-l~~~a~~~~~---------- 370 (949)
++|+++|+|+||+.+.||+|||||||+|+|+|.+.++....+. .++. ++ +...+.+++.
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 9999999999999999999999999999999999876422211 1111 11 2222222211
Q ss_pred ---cCCChhHHHHHHhc----cChhhhhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcC------
Q 041450 371 ---ENQDAIDASIVGML----ADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGL------ 437 (949)
Q Consensus 371 ---~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~------ 437 (949)
..++|.+.|++++. .|.++.+...+.++++||||++|+|+++++.++|..+.++|||.|.++..|..
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 12478999998875 35566778888999999999999999999988776349999999999999964
Q ss_pred -----chHHHHHHHHHHHHHHHhcCeEEEEEEeecCCc-------c-ccCCCCCceEEEEEecCCCCCcchHHHHHHHHh
Q 041450 438 -----KGEMRRKAHQIIDNFAERGLRALGVGRQTVPEK-------T-KESEGSPWEFVGLLPLFDPPRHDSAETIRRALD 504 (949)
Q Consensus 438 -----~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~-------~-~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~ 504 (949)
+++.+..+.+.|+.||.+|+|++|+||++..+. + .+..+.+++++|+++++||+|||++++|+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 334456788999999999999999999984332 1 245678999999999999999999999999999
Q ss_pred CCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCE
Q 041450 505 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHI 584 (949)
Q Consensus 505 aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~ 584 (949)
|||+|.|+||||..||++||.+|||.++......+.|.+.. .+++++.+++..+.+|+||.+|.||+-+|+.|+++||+
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr-~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~V 740 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFR-ELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEV 740 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhh-hcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcE
Confidence 99999999999999999999999998765554566666555 78899999999999999999999999999999999999
Q ss_pred EEEEcCCccCHHhhhcCCceeEec-cchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 041450 585 CGMTGDGVNDAPALKRADIGIAVA-DATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITI-RIVLGF 662 (949)
Q Consensus 585 V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i-~~~~~~ 662 (949)
||++|||.||+||||+||||.||| .||++|||+|||+|+||||++|+.+++|||+.|.+|+||++|+++.|+ ++++.|
T Consensus 741 VAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~f 820 (1034)
T KOG0204|consen 741 VAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNF 820 (1034)
T ss_pred EEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhh
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999998 456666
Q ss_pred HHHHhhccCCCChHHHHHHHHhhhcc-hhccccCCCCCC-------CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041450 663 LLVALLWKFDFPPFMILIIAILNDGT-IMTISKDRVKPS-------PMPDSWKLKEIFGTGVVLGTYMALVTAFFFWLIH 734 (949)
Q Consensus 663 ~~~~~~~~~~~~~~~il~i~i~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 734 (949)
..+...-..|++.+|+||.|+++|.+ +++++.+++.+. .+...+..+.+|+..+.+++|+.++.+.+.+...
T Consensus 821 v~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~ 900 (1034)
T KOG0204|consen 821 VSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK 900 (1034)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 66666667899999999999999988 799999988543 2345667788999999999999988876554432
Q ss_pred hhcccccccCccccc-CchhHHHHHHHHHHHHHHHHHhhhhccCC--CCcccChhHHHHHHHHHHHHHHHHHHHhhcccc
Q 041450 735 DTRFFTNTFNLKEIH-EKPDMLSAALYLQVSIISQALIFVTRSRS--WSFVERPGVMLVGAFLVAQLLATIIAVYAKWEF 811 (949)
Q Consensus 735 ~~~~~~~~~g~~~~~-~~~~~~~t~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 811 (949)
..| +..+.. ....+..|++|.++++++.++-++.|.-. -.|......+++++++...++.+++.+.....+
T Consensus 901 --~if----~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~~ 974 (1034)
T KOG0204|consen 901 --SIF----GLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGAF 974 (1034)
T ss_pred --hhh----ccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCcc
Confidence 222 222211 12445669999999999999999999854 111111111234444444444444444433455
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHhHHHHHH
Q 041450 812 ARIEGIGWGWAGAIWIFSIITYLPLDPLKFV 842 (949)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 842 (949)
+...+.+|.-|+++.++.+..+..--+.|.+
T Consensus 975 ~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 975 FSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred eeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 7788888888888777776666555555543
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-112 Score=1063.57 Aligned_cols=779 Identities=27% Similarity=0.368 Sum_probs=626.1
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHcC---CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeC
Q 041450 63 FLGFMWNPLSWVMEAAAIMAIVLANG---GGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRD 139 (949)
Q Consensus 63 ~~~~~~~~~~~~l~~~ail~~~l~~~---~~~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rd 139 (949)
++++|++|+.++++++++++++++.. .....+|.++++|++++++++.+++++|+++++++++|++..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 47899999999999999999998632 122358999999999999999999999999999999999988999999999
Q ss_pred CeEEEEeccccCCCcEEEEcCCCeeccceeEEecCCeEEEecCCCCCCceeecCCC-------------CceeeceeEee
Q 041450 140 EKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPG-------------DEVFSGSTCKQ 206 (949)
Q Consensus 140 g~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g-------------~~v~aGs~v~~ 206 (949)
|++++|+++||||||+|.|++||.|||||++++|+.+.||||+|||||.|+.|.++ |.+|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999997899999999999999999876 78999999999
Q ss_pred ccEEEEEEEeCchhhHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c----cCcH----HHHH
Q 041450 207 GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAI-Q----RRSY----RDGI 276 (949)
Q Consensus 207 G~~~~~Vi~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~----~~~~----~~~i 276 (949)
|++.++|++||.+|++||+.++++.. .+++++|+.+++++..+...+++.+++.+++.+.. . +.+| ...+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999988765 57899999999998775543333222222221111 1 1122 2344
Q ss_pred HHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeec-----
Q 041450 277 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVF----- 351 (949)
Q Consensus 277 ~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~----- 351 (949)
..++++++++||++||+++++++++++++|+++|+++|+++++|+||++++||||||||||+|+|+|.+++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 456788999999999999999999999999999999999999999999999999999999999999999864210
Q ss_pred ------cCCCC-------------------hHHHHHHHHHhcccc------------CCChhHHHHHHhccChh------
Q 041450 352 ------VKGTD-------------------SDGLLLAAARASRVE------------NQDAIDASIVGMLADPK------ 388 (949)
Q Consensus 352 ------~~~~~-------------------~~~~l~~~a~~~~~~------------~~~~~~~ai~~~~~~~~------ 388 (949)
..+++ .+.++..++.|++.. .+||.|.|++.++.+..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 00000 123455667776531 24899999987653211
Q ss_pred --------------hhhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcC-----------chHHHH
Q 041450 389 --------------EARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGL-----------KGEMRR 443 (949)
Q Consensus 389 --------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-----------~~~~~~ 443 (949)
..+..++.++.+||+|.+|||++++++ ++++.+++|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 123457789999999999999999876 467889999999999999963 134566
Q ss_pred HHHHHHHHHHH-hcCeEEEEEEeecCCcc----------ccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEE
Q 041450 444 KAHQIIDNFAE-RGLRALGVGRQTVPEKT----------KESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMI 512 (949)
Q Consensus 444 ~~~~~i~~~a~-~GlR~l~~a~~~~~~~~----------~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~ml 512 (949)
++.+.+++|++ +|+||+++|||.+++++ .+..|++|+|+|+++++||||+|++++|++|+++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986432 24568899999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHhCCCCCCCC--CccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcC
Q 041450 513 TGDQLAIGKETGRRLGMGTNMYP--SSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGD 590 (949)
Q Consensus 513 TGD~~~tA~~ia~~~Gi~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGD 590 (949)
|||+.+||.++|+++|+..+... ...+.|.+. +.+++++..+...+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l-~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREF-DEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHH-hhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999753211 123344332 345566777788888999999999999999999999999999999
Q ss_pred CccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc
Q 041450 591 GVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVA-LLW 669 (949)
Q Consensus 591 G~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~~-~~~ 669 (949)
|+||+||||+|||||||++|+++|+++||+++.+|+|+.|+.++++||++|+|+++++.|.+++|+..++..+++. +.+
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 718 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI 718 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998776665554 345
Q ss_pred cCCCChHHHHHHHHhhhcc-hhccccCCCCCCC---CC----CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccc
Q 041450 670 KFDFPPFMILIIAILNDGT-IMTISKDRVKPSP---MP----DSWKLKEIFGTGVVLGTYMALVTAFFFWLIHDT-RFFT 740 (949)
Q Consensus 670 ~~~~~~~~il~i~i~~~~~-~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~ 740 (949)
+.||+|+|++|+++++|.+ +++++.+++++.. +| ++...++.+..+++.|+++++++++.|++.+.. ++..
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 798 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTG 798 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 6799999999999999965 7888888875442 12 223344566677888999998877666554321 2211
Q ss_pred c--cc--Ccc---cc----cCchhHHHHHHHHHHHHHHHHHhhhhccCCCCccc---ChhHHHHHHHHHHHHHHHHHHHh
Q 041450 741 N--TF--NLK---EI----HEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVE---RPGVMLVGAFLVAQLLATIIAVY 806 (949)
Q Consensus 741 ~--~~--g~~---~~----~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~ 806 (949)
. .. +.. +. .....+.+|+.|.++++++.++.|++|+.+.+++. ..|.++++++++..++..++ .|
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~-~~ 877 (917)
T TIGR01116 799 CDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLI-LY 877 (917)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHH-HH
Confidence 0 00 000 00 00123567999999999999999999997644322 23446666666655554443 34
Q ss_pred hc--ccccccCchhHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 041450 807 AK--WEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIR 844 (949)
Q Consensus 807 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r 844 (949)
.+ -.++++.+.+|..|++++.++++.++..++.|+++|
T Consensus 878 v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 878 VPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33 234567788999999999999999999999998753
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-110 Score=1055.88 Aligned_cols=753 Identities=21% Similarity=0.267 Sum_probs=596.8
Q ss_pred CCCCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCCCCchhHHHHHHHHHHHHHH
Q 041450 32 PKGLTTAEGEKRLQIFGYNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTI 111 (949)
Q Consensus 32 ~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~ii~~~~i~~~i 111 (949)
.+|||++|+++|+++||+|+++.+++++|..|++++.+|+++++++++++ |++. .+|++++.|+++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l-~~~~------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVIL-WLLD------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHH-HHhh------hhHHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999888999999999999998766666444 4443 3789999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEc--CCCeeccceeEEecCCeEEEecCCCCCCce
Q 041450 112 SFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIK--LGDIVPADARLLEGDPLKIDQAALTGESLP 189 (949)
Q Consensus 112 ~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~--~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~p 189 (949)
++++++++.++++++.. .++.++|+|||+|++|+++||||||+|.|+ +|++|||||+|++| ++.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccc
Confidence 99999999998888654 567999999999999999999999999999 99999999999999 699999999999999
Q ss_pred eecCCC------------------CceeeceeEee-------ccEEEEEEEeCchhhHHhHHHhhhcc-CCCChHHHHHH
Q 041450 190 VTKNPG------------------DEVFSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLT 243 (949)
Q Consensus 190 v~K~~g------------------~~v~aGs~v~~-------G~~~~~Vi~tG~~T~~gki~~l~~~~-~~~~~~~~~~~ 243 (949)
+.|.+. +++|+||.+.+ |.+.++|++||.+|..|++.+.+... ....++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 35999999985 78999999999999999999987665 45677888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhhhc
Q 041450 244 AIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 323 (949)
Q Consensus 244 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg 323 (949)
++..+++++.+++.++ .++.+...+.++...+..++.+++++||++||++++++++.++.||+++|++||++.++|.+|
T Consensus 368 ~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIY-TIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 7665543332222211 122222345678889999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeCCCCCccCCceEEEEEEEeeccCC----------CChHHHHHHHHHhccc------cCCChhHHHHHHhccCh
Q 041450 324 GMDVLCSDKTGTLTLNKLSVDKSLIEVFVKG----------TDSDGLLLAAARASRV------ENQDAIDASIVGMLADP 387 (949)
Q Consensus 324 ~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~----------~~~~~~l~~~a~~~~~------~~~~~~~~ai~~~~~~~ 387 (949)
+++++|||||||||+|+|+|.+......... .....+....+.|+.. ..+||+|.|++.+.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999998764211000 1122345555666643 23699999999876311
Q ss_pred ----hhh---------------hcCceEEeeccCCCCCccEEEEEEcCC-CcEEEEecCchHHHHHhhcCchHHHHHHHH
Q 041450 388 ----KEA---------------RAGITEVHFLPFNPVDKRTAITYIDSN-GDWHRTSKGAPEQIIDLCGLKGEMRRKAHQ 447 (949)
Q Consensus 388 ----~~~---------------~~~~~~l~~~pF~s~~kr~sv~~~~~~-g~~~~~~KGa~e~il~~~~~~~~~~~~~~~ 447 (949)
++. ...+++++.+||+|.+|||+++++..+ ++++.++|||||.|+++|.. +..++.+.+
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHH
Confidence 000 245788999999999999999998654 56789999999999999974 345778889
Q ss_pred HHHHHHHhcCeEEEEEEeecCCc--------cccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHH
Q 041450 448 IIDNFAERGLRALGVGRQTVPEK--------TKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAI 519 (949)
Q Consensus 448 ~i~~~a~~GlR~l~~a~~~~~~~--------~~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t 519 (949)
.+++|+++|+|||++|||.+++. ++++.|++|+|+|+++++||+||+++++|++|+++||+++|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998742 2356789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCC---------------------------------------------------ccccCCcccc--
Q 041450 520 GKETGRRLGMGTNMYPS---------------------------------------------------SSLLGQSKDE-- 546 (949)
Q Consensus 520 A~~ia~~~Gi~~~~~~~---------------------------------------------------~~l~~~~~~~-- 546 (949)
|.++|++|||.++.... .+++|...+.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 99999999996432100 0011111100
Q ss_pred ccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCC
Q 041450 547 SIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPG 626 (949)
Q Consensus 547 ~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~ 626 (949)
.++++++.+++.+..||||++|+||.++|+.+|+.|++|+|||||+||+||||+|||||||+++ |++ .|||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 1223456777888999999999999999999999999999999999999999999999999865 555 79999999999
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHhhhcc-hhccccCCCCCC----C
Q 041450 627 LSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALLWKFDFPPFMILIIAILNDGT-IMTISKDRVKPS----P 701 (949)
Q Consensus 627 l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~il~i~i~~~~~-~~~~~~~~~~~~----~ 701 (949)
|++++.+|++||+++.++++.+.|.+.+++..++..+ .....+.+|+++|++|++++++.+ .++++.+++.+. +
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVS-ILYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 9999999999999999999999999888876654443 334567899999999999999887 688888877543 2
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCccc-ccCchhHHHHHHHHHHHHHHHHHhhhhccCCCC
Q 041450 702 MPDSWKLKEIFGTGVVLGTYMALVTAFFFWLIHDTRFFTNTFNLKE-IHEKPDMLSAALYLQVSIISQALIFVTRSRSWS 780 (949)
Q Consensus 702 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~ 780 (949)
++.+...+..+...+.+++++.++.+..|++....+|+........ .........|++| .++.++++..+..++.+..
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~p 1001 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPP 1001 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcc
Confidence 2334444566777778888888888877777766556522111100 0011233568888 5566677777777776643
Q ss_pred cccC--hhHHHHHHHHHHHHH
Q 041450 781 FVER--PGVMLVGAFLVAQLL 799 (949)
Q Consensus 781 ~~~~--~~~~l~~~~~~~~~~ 799 (949)
|... .|.+++++++++.++
T Consensus 1002 f~~~~~~N~~~~~~~~~~~~~ 1022 (1054)
T TIGR01657 1002 FREPIYKNKPFVYLLITGLGL 1022 (1054)
T ss_pred hhhhHHHhHHHHHHHHHHHHH
Confidence 3221 233445554444333
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-112 Score=961.52 Aligned_cols=840 Identities=24% Similarity=0.385 Sum_probs=689.6
Q ss_pred chhhhhcc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHH
Q 041450 5 SLEEIKNE-NVDLERIPVAEVFEQLKCT-PKGLTTAEGEKRLQIFGYNKLEEKK-ESKLLKFLGFMWNPLSWVMEAAAIM 81 (949)
Q Consensus 5 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~ail 81 (949)
+|++.|+| .+|.|++|.+|++++++++ .+|||.+++.+++.+-|+|.+++++ .+.|.+|++|+++.+.+++++++++
T Consensus 27 ~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l 106 (1019)
T KOG0203|consen 27 ELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAIL 106 (1019)
T ss_pred hHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHH
Confidence 57788888 8999999999999999999 8999999999999999999998776 5679999999999999999999999
Q ss_pred HHHHHcC-----CCCCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcE
Q 041450 82 AIVLANG-----GGKPPDW-PDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDI 155 (949)
Q Consensus 82 ~~~l~~~-----~~~~~~~-~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDi 155 (949)
+++.+.- ...+.+. +-+.++..++++..+..++|+.+..+.+++.+++.|+.+.|+|||+...+..+||||||+
T Consensus 107 ~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~ 186 (1019)
T KOG0203|consen 107 CFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDL 186 (1019)
T ss_pred HHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccc
Confidence 9985421 1111222 333444555667788899999999999999999999999999999999999999999999
Q ss_pred EEEcCCCeeccceeEEecCCeEEEecCCCCCCceeecCC----------CCceeeceeEeeccEEEEEEEeCchhhHHhH
Q 041450 156 ISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNP----------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKA 225 (949)
Q Consensus 156 V~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~----------g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki 225 (949)
|.++-||+||||.+++++..+++|+|+|||||.|..+.+ .|+.|.+|.+.+|.++++|++||.+|.+|++
T Consensus 187 v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~i 266 (1019)
T KOG0203|consen 187 VEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRI 266 (1019)
T ss_pred eeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeeh
Confidence 999999999999999999999999999999999999877 3688999999999999999999999999999
Q ss_pred HHhhhc-cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHH
Q 041450 226 AHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 304 (949)
Q Consensus 226 ~~l~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~ 304 (949)
+.+... ...++++++.++.+..+..... +.+.++++..-...++.+.+++..++.++++.+|.+|+..+++.++.-++
T Consensus 267 a~l~~~~~~~~t~~~~ei~~fi~~it~vA-i~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Ltltak 345 (1019)
T KOG0203|consen 267 ASLASGLEDGKTPIAKEIEHFIHIITGVA-IFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAK 345 (1019)
T ss_pred hhhhccCCCCCCcchhhhhchHHHHHHHH-HHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHHHHHH
Confidence 998765 4678888888888776643222 22222233222334788889988899999999999999999999999999
Q ss_pred HHhhCCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccC----------------CCChHHHHHHHHHhc
Q 041450 305 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVK----------------GTDSDGLLLAAARAS 368 (949)
Q Consensus 305 ~l~~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~----------------~~~~~~~l~~~a~~~ 368 (949)
||+++++++|++.+.|+||..++||+|||||||+|.|+|.+.+.+.... +..-.++.++++.|+
T Consensus 346 rMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn 425 (1019)
T KOG0203|consen 346 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCN 425 (1019)
T ss_pred HHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999876431110 111235667777776
Q ss_pred ccc---------------CCChhHHHHHHhc----cChhhhhcCceEEeeccCCCCCccEEEEEEcCC---CcEEEEecC
Q 041450 369 RVE---------------NQDAIDASIVGML----ADPKEARAGITEVHFLPFNPVDKRTAITYIDSN---GDWHRTSKG 426 (949)
Q Consensus 369 ~~~---------------~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~---g~~~~~~KG 426 (949)
+.. .+|+.+.|+++++ .+.++.++..+.+..+||||.+|..-.+....+ .+..+..||
T Consensus 426 ~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKG 505 (1019)
T KOG0203|consen 426 RAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKG 505 (1019)
T ss_pred cceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecC
Confidence 532 3578888888865 455677888888899999999999876666443 577889999
Q ss_pred chHHHHHhhcC----------chHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccc-----------cCCCCCceEEEEE
Q 041450 427 APEQIIDLCGL----------KGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTK-----------ESEGSPWEFVGLL 485 (949)
Q Consensus 427 a~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~-----------~~~e~~l~llG~~ 485 (949)
|||.++++|+. ++...+.+++...++...|-||++++++.++++++ ...-.+|.|+|++
T Consensus 506 ape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~ 585 (1019)
T KOG0203|consen 506 APERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLI 585 (1019)
T ss_pred ChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchh
Confidence 99999999973 45667788888899999999999999999986642 2234678999999
Q ss_pred ecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC------------CCc----------cccCCc
Q 041450 486 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMY------------PSS----------SLLGQS 543 (949)
Q Consensus 486 ~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~------------~~~----------~l~~~~ 543 (949)
++-||||..+|+++.+||.|||||+|+|||++.||+++|++.||..+.. +.. ++.|.+
T Consensus 586 s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~e 665 (1019)
T KOG0203|consen 586 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSE 665 (1019)
T ss_pred hccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccc
Confidence 9999999999999999999999999999999999999999999754211 011 122222
Q ss_pred cccccCCchHHHHhHhcc--eEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEec-cchHHHHhcccc
Q 041450 544 KDESIASMPVEELIEKAD--GFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVA-DATDAARSASDI 620 (949)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~--v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDi 620 (949)
...++.+++++++.+.. ||||.||+||..||+.+|++|.+|+++|||+||+||||+|||||||| .|+|++|+|||+
T Consensus 666 -L~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADm 744 (1019)
T KOG0203|consen 666 -LPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADM 744 (1019)
T ss_pred -ccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcce
Confidence 23567788999998765 99999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhccCCCChHHHHHHHHhhhcc-hhccccCCCC
Q 041450 621 VLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL-VALLWKFDFPPFMILIIAILNDGT-IMTISKDRVK 698 (949)
Q Consensus 621 vl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~-~~~~~~~~~~~~~il~i~i~~~~~-~~~~~~~~~~ 698 (949)
+|+||||++|+..+++||-+|+|.||.+.|.++.||..+..++. +.+..|+|+.++.+|.|.+.+|.. +++++|+.++
T Consensus 745 ILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aE 824 (1019)
T KOG0203|consen 745 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAE 824 (1019)
T ss_pred EEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCch
Confidence 99999999999999999999999999999999999976665544 556689999999999999999986 7999998864
Q ss_pred CC--------CCCCchhhHH-HHHHHHHHHHHHHHHHHHHHHHH-Hhhccccccc----------CcccccCchh-----
Q 041450 699 PS--------PMPDSWKLKE-IFGTGVVLGTYMALVTAFFFWLI-HDTRFFTNTF----------NLKEIHEKPD----- 753 (949)
Q Consensus 699 ~~--------~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~----------g~~~~~~~~~----- 753 (949)
.. |+.++.-..+ +....+..|+.+++.+|+.|++. +..+|++... +++++.|+++
T Consensus 825 sDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWty 904 (1019)
T KOG0203|consen 825 SDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTY 904 (1019)
T ss_pred hhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccH
Confidence 22 2234443344 44445777999999999766554 5566665431 2233333332
Q ss_pred --------HHHHHHHHHHHHHHHHHhhhhccCC--CCcccChhHHHHHHHHHHHHHHHHHHHhhc-ccccccCchhHHHH
Q 041450 754 --------MLSAALYLQVSIISQALIFVTRSRS--WSFVERPGVMLVGAFLVAQLLATIIAVYAK-WEFARIEGIGWGWA 822 (949)
Q Consensus 754 --------~~~t~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 822 (949)
+.+|+.|..+.+.|++-.+.+.+++ .+-....||.+++++++-.+++.++++-.. ...+++.+..|.||
T Consensus 905 eqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~w 984 (1019)
T KOG0203|consen 905 EQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWW 984 (1019)
T ss_pred HHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEE
Confidence 2567888889999988766666555 444567888999999998888877754432 22345778899999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhh
Q 041450 823 GAIWIFSIITYLPLDPLKFVIRYA 846 (949)
Q Consensus 823 ~~~~~~~~~~~~~~~~~k~~~r~~ 846 (949)
++.+.++++.++.+++.|++.|.+
T Consensus 985 l~a~P~~ilIfvydE~Rk~~IR~~ 1008 (1019)
T KOG0203|consen 985 LVAFPFGILIFVYDEVRKLFIRRY 1008 (1019)
T ss_pred EecccceeeeeeHHHHHhHhhhhC
Confidence 999999999999999999998865
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-102 Score=985.76 Aligned_cols=785 Identities=19% Similarity=0.236 Sum_probs=586.4
Q ss_pred cCCCcccccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041450 47 FGYNKLEEKKESKL----LKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNA 122 (949)
Q Consensus 47 ~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~ 122 (949)
|..|.+...||++| +.|++||.+|++++|+++++++++.... ....+...++++++++++.+.+++++++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s--~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILS--PTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcC--CCCccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999999886 7889999999999999999999985321 12234455667777778999999999999999
Q ss_pred HHHHhcCCCCeEEEEeC-CeEEEEeccccCCCcEEEEcCCCeeccceeEEecCC----eEEEecCCCCCCceeecCCC--
Q 041450 123 AAALMAGLAPKTKVLRD-EKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDP----LKIDQAALTGESLPVTKNPG-- 195 (949)
Q Consensus 123 ~~~l~~~~~~~~~V~rd-g~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~Vdes~LTGEs~pv~K~~g-- 195 (949)
.++++ +++++|+|+ |++++++|+||+|||+|.|++||.||||++|+++++ ++||||+|||||+|+.|.+.
T Consensus 79 d~~~n---~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEVN---NRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHHh---CcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 87754 478999997 899999999999999999999999999999998544 99999999999999988641
Q ss_pred ----------------------------------------------CceeeceeEee-ccEEEEEEEeCchhhHHhHHHh
Q 041450 196 ----------------------------------------------DEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 228 (949)
Q Consensus 196 ----------------------------------------------~~v~aGs~v~~-G~~~~~Vi~tG~~T~~gki~~l 228 (949)
|.+|+||.+++ |.+.|+|++||.+|++++..
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~-- 233 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNA-- 233 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcC--
Confidence 56889999999 89999999999999887632
Q ss_pred hhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----Cc---------------HHHHHHHHHHHHHhhcCC
Q 041450 229 VDSTNQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQR----RS---------------YRDGIDNLLVLLIGGIPI 289 (949)
Q Consensus 229 ~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~----~~---------------~~~~i~~~l~ll~~~iP~ 289 (949)
.....+.+++++.++++..+++++.++.+++..++...+.. .. +...+..+++++..++|+
T Consensus 234 ~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 234 TQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred CCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 22235789999999999877655444433333333222111 01 122567788999999999
Q ss_pred chhHHHHHHHHHHH------HHHhhC----CcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCC----
Q 041450 290 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGT---- 355 (949)
Q Consensus 290 aL~~~~~i~~~~~~------~~l~~~----~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~---- 355 (949)
+||+++++++++++ .+|.++ ++++|+.+++|+||+|++||+|||||||+|+|+++++.+....++.
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999 778764 5999999999999999999999999999999999999763211100
Q ss_pred -----------------------------C----------------hHHHHHHHHHhcccc--------------CCChh
Q 041450 356 -----------------------------D----------------SDGLLLAAARASRVE--------------NQDAI 376 (949)
Q Consensus 356 -----------------------------~----------------~~~~l~~~a~~~~~~--------------~~~~~ 376 (949)
+ ..+++..++.|++.. ..+|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 124566677776531 24799
Q ss_pred HHHHHHhccChh------------------hhhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcC-
Q 041450 377 DASIVGMLADPK------------------EARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGL- 437 (949)
Q Consensus 377 ~~ai~~~~~~~~------------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~- 437 (949)
|.|++.++...+ .....|++++.+||+|.||||++++++++|++++++|||||.|+++|..
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 999998763221 0124588899999999999999999998888999999999999999974
Q ss_pred chHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccc-------------------------cCCCCCceEEEEEecCCCCC
Q 041450 438 KGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTK-------------------------ESEGSPWEFVGLLPLFDPPR 492 (949)
Q Consensus 438 ~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~-------------------------~~~e~~l~llG~~~i~D~lr 492 (949)
+++.++++.+++++|+.+|+|||++|||.++++++ +..|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 34567788899999999999999999999976531 34689999999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCc-----------------------------------
Q 041450 493 HDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS----------------------------------- 537 (949)
Q Consensus 493 ~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~----------------------------------- 537 (949)
+|++++|+.|++|||++||+|||+++||+++|++|||.++.....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 999999999999999999999999999999999999975422110
Q ss_pred ----cccCCccccccCCc---hHHHHhHhcc--eEEeeChhhHHHHHHHHhhc-CCEEEEEcCCccCHHhhhcCCceeEe
Q 041450 538 ----SLLGQSKDESIASM---PVEELIEKAD--GFAGVFPEHKYEIVKKLQER-KHICGMTGDGVNDAPALKRADIGIAV 607 (949)
Q Consensus 538 ----~l~~~~~~~~~~~~---~~~~~~~~~~--v~ar~sP~qK~~iV~~lq~~-g~~V~miGDG~ND~~aLk~AdVGIam 607 (949)
++.|...+..++++ .+.+++.+++ ||||++|+||+++|+.+|+. |++|+|||||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 12222211111111 2334555555 99999999999999999998 99999999999999999999999998
Q ss_pred c--cchHHHHhcccccccCCChhHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----CCChHHHHH
Q 041450 608 A--DATDAARSASDIVLTEPGLSVIVSAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALLWKF----DFPPFMILI 680 (949)
Q Consensus 608 g--~g~~~a~~aaDivl~~~~l~~i~~~i-~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~~~~~~~----~~~~~~il~ 680 (949)
. +|.+ |+.+||+++.+ |+.+..++ .|||++|+|+++++.|.+++|+.+++..+++.++.++ ++.++++++
T Consensus 794 ~g~eg~q-A~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 870 (1057)
T TIGR01652 794 SGKEGMQ-AVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVL 870 (1057)
T ss_pred cChHHHH-HHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 4 3444 56699999974 99999887 8899999999999999999999888887777765443 577888999
Q ss_pred HHHhhhcc-hhccccCCCCCC-----CCCC---------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCc
Q 041450 681 IAILNDGT-IMTISKDRVKPS-----PMPD---------SWKLKEIFGTGVVLGTYMALVTAFFFWLIHDTRFFTNTFNL 745 (949)
Q Consensus 681 i~i~~~~~-~~~~~~~~~~~~-----~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 745 (949)
++++.+.+ +++++....+++ ..|. .++. +.|..+++.|++++++++++.++.+...... ..|
T Consensus 871 ~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~-~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g- 947 (1057)
T TIGR01652 871 YNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFST-KTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSG- 947 (1057)
T ss_pred HHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCC-
Confidence 99888765 677764322221 1222 2333 3444566789999998886655554321111 112
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHhhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHH-hh-c---ccccccCchhHH
Q 041450 746 KEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVERPGVMLVGAFLVAQLLATIIAV-YA-K---WEFARIEGIGWG 820 (949)
Q Consensus 746 ~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~-~---~~~~~~~~~~~~ 820 (949)
...+.....+.+|+.+.+..++.++. .++.|+|.... .+++.++..++..++.. +. . ++.+......+.
T Consensus 948 --~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~wt~~~~~---~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 1021 (1057)
T TIGR01652 948 --SLDDFSSVGVIVFTALVVIVNLKIAL-EINRWNWISLI---TIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFG 1021 (1057)
T ss_pred --cccchhhHHHHHHHHHHHHHHHHHHH-HHhHhHHHHHH---HHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHH
Confidence 12244556677777777666665422 23334432221 11111111111111111 10 0 011111223455
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhcCch
Q 041450 821 WAGAIWIFSIITYLPLDPLKFVIRYAQSGK 850 (949)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~ 850 (949)
+|+.+++..++.++|+.++|+++|.+.|+.
T Consensus 1022 f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~ 1051 (1057)
T TIGR01652 1022 FWLVLLVIVLISLLPRFTYKAIQRLFRPPD 1051 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 777778888888999999999988887644
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-99 Score=951.29 Aligned_cols=783 Identities=16% Similarity=0.175 Sum_probs=577.1
Q ss_pred HhcCCCcccccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 041450 45 QIFGYNKLEEKKESKL----LKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAG 120 (949)
Q Consensus 45 ~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~ 120 (949)
.+|..|.+.+.||++| +.+++||..+.|++|+++++++++... .....+...+++++++++.++.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~--s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQL--AVFGRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCc--ccCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3699999999999876 678899999999999999999988432 2223566778888999999999999999999
Q ss_pred HHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCeeccceeEEecC----CeEEEecCCCCCCceeecCCC-
Q 041450 121 NAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGD----PLKIDQAALTGESLPVTKNPG- 195 (949)
Q Consensus 121 ~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~~~Vdes~LTGEs~pv~K~~g- 195 (949)
++.++.+ +.+++|+|+|++++++|++|+|||+|.|++||.|||||++++++ .++||||+|||||+|+.|.++
T Consensus 163 k~d~~~N---~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIEN---NRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhhc---CcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 9988764 47899999999999999999999999999999999999999843 499999999999999999642
Q ss_pred --------------------------------------------CceeeceeEeecc-EEEEEEEeCchhhHHhHHHhhh
Q 041450 196 --------------------------------------------DEVFSGSTCKQGE-IEAVVIATGVHTFFGKAAHLVD 230 (949)
Q Consensus 196 --------------------------------------------~~v~aGs~v~~G~-~~~~Vi~tG~~T~~gki~~l~~ 230 (949)
|.+++||.+++++ ++|+|++||.+|+... +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 4577888888874 9999999999998532 2222
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhcc-C------------------------cH----HHHHHHH
Q 041450 231 STNQVGHFQKVLTAIGNFCICSIAVGMFIEIIVM--WAIQR-R------------------------SY----RDGIDNL 279 (949)
Q Consensus 231 ~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~--~~~~~-~------------------------~~----~~~i~~~ 279 (949)
.+.|.+++++.+|++..+++++.++.++++.++. |.... . .+ ...+..+
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 2358899999999988775554444333333332 21100 0 00 1123334
Q ss_pred HHHHHhhcCCchhHHHHHHHHHHHHHHhhCC----------cccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEe
Q 041450 280 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIE 349 (949)
Q Consensus 280 l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~----------i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 349 (949)
++++..+||++|++.+++++..++..+.++. +.+|+.+.+|+||+|++||+|||||||+|+|+|++|.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 6777899999999999999988888887654 789999999999999999999999999999999999873
Q ss_pred eccCC-----------------------------------------CC------hHHHHHHHHHhccccC----------
Q 041450 350 VFVKG-----------------------------------------TD------SDGLLLAAARASRVEN---------- 372 (949)
Q Consensus 350 ~~~~~-----------------------------------------~~------~~~~l~~~a~~~~~~~---------- 372 (949)
+..++ .+ ..+++.+++.|++...
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 21110 00 0246677788876421
Q ss_pred --------CChhHHHHHHhccCh----------------hhhhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCch
Q 041450 373 --------QDAIDASIVGMLADP----------------KEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAP 428 (949)
Q Consensus 373 --------~~~~~~ai~~~~~~~----------------~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~ 428 (949)
.+|.+.|++.++.+. ...+..|++++.+||+|+|||||+++++++|++++++||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 268899999877432 12356789999999999999999999988899999999999
Q ss_pred HHHHHhhcC--chHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccc-------------------------cCCCCCceE
Q 041450 429 EQIIDLCGL--KGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTK-------------------------ESEGSPWEF 481 (949)
Q Consensus 429 e~il~~~~~--~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~-------------------------~~~e~~l~l 481 (949)
|.|+++|.. +++.++++.+++++|+++|+|||++|||.++++++ +.+|++|++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 999999974 24567788899999999999999999999976432 346899999
Q ss_pred EEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcccc---------------------
Q 041450 482 VGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL--------------------- 540 (949)
Q Consensus 482 lG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~--------------------- 540 (949)
+|+++++||||+|++++|++|+++||++||+|||+.+||++||++|||.++......+.
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 99999999999999999999999999999999999999999999999976432111110
Q ss_pred --------------------------CCccccccC---CchHHHHhHhcc--eEEeeChhhHHHHHHHHhhc-CCEEEEE
Q 041450 541 --------------------------GQSKDESIA---SMPVEELIEKAD--GFAGVFPEHKYEIVKKLQER-KHICGMT 588 (949)
Q Consensus 541 --------------------------~~~~~~~~~---~~~~~~~~~~~~--v~ar~sP~qK~~iV~~lq~~-g~~V~mi 588 (949)
|...+..++ .+.+.++..+++ ||||++|+||+++|+.+|++ +++|+||
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 111100001 123445555555 79999999999999999997 5899999
Q ss_pred cCCccCHHhhhcCCceeEec--cchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041450 589 GDGVNDAPALKRADIGIAVA--DATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVA 666 (949)
Q Consensus 589 GDG~ND~~aLk~AdVGIamg--~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~~ 666 (949)
|||+||+||||+|||||++. +|.+|++ +||+++.++++..-+.+ .|||++|+|+.+.+.|.+++|+.+++..+++.
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~qA~~-aSDfaI~~Fr~L~rLLl-vHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~ 955 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQAVM-ASDFAMGQFRFLVPLLL-VHGHWNYQRMGYMILYNFYRNAVFVLVLFWYV 955 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHHHHH-hhccchhhhHHHHHHHH-HhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999984 6777766 99999987777444333 49999999999999999999999999999998
Q ss_pred hhccCCCC----hHHHHHH-HHhhhcchhccc-cCCCCCC----CCC---------CchhhHHHHHHHHHHHHHHHHHHH
Q 041450 667 LLWKFDFP----PFMILII-AILNDGTIMTIS-KDRVKPS----PMP---------DSWKLKEIFGTGVVLGTYMALVTA 727 (949)
Q Consensus 667 ~~~~~~~~----~~~il~i-~i~~~~~~~~~~-~~~~~~~----~~~---------~~~~~~~~~~~~~~~g~~~~~~~~ 727 (949)
++.+|.-. ++.+.++ .+++.+|++.++ +|+..+. ..| ..++. +.|+.+++.|++++++.|
T Consensus 956 ~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~-~~F~~w~~~~i~qs~iif 1034 (1178)
T PLN03190 956 LFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNS-KLFWLTMIDTLWQSAVVF 1034 (1178)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCH-HHHHHHHHHHHHHHHHHH
Confidence 88776443 4444444 445666677774 4443322 122 22333 345556777999999998
Q ss_pred HHHHHHHhhcccccccCcccccCchhHHHHHHHHHHHHHHHHH-hhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHHh
Q 041450 728 FFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQAL-IFVTRSRSWSFVERPGVMLVGAFLVAQLLATIIAVY 806 (949)
Q Consensus 728 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 806 (949)
++.++.+..... +. ....+.+++.+.++.++. ++.++ .|.|..... +++.++..++..++..+
T Consensus 1035 f~~~~~~~~~~~----~~-------~~~~~~~~~~~v~~vnl~i~~~~~--~wt~~~~~~---i~~Si~~~~i~~~~~~~ 1098 (1178)
T PLN03190 1035 FVPLFAYWASTI----DG-------SSIGDLWTLAVVILVNLHLAMDII--RWNWITHAA---IWGSIVATFICVIVIDA 1098 (1178)
T ss_pred HHHHHHhcCCCc----Cc-------eeEhHhhhhHHHHHHHHHHHHHHh--hhhHHHHHH---HHHHHHHHHHHHHHHHh
Confidence 776665532211 10 111233344444444433 33333 344332221 11111221211111111
Q ss_pred hc-----ccccccCchhHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCchhhhhh
Q 041450 807 AK-----WEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIRYAQSGKAWDNL 855 (949)
Q Consensus 807 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~ 855 (949)
.+ +.+.. ....+.+|+.+++..++.++|+.++|+++|.+.|.. .+.+
T Consensus 1099 ~~~~~~~~~~~~-~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~-~~~~ 1150 (1178)
T PLN03190 1099 IPTLPGYWAIFH-IAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCD-VQIA 1150 (1178)
T ss_pred cccchhHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHHH
Confidence 00 11111 122455777778888888999999999998888654 3443
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-93 Score=845.98 Aligned_cols=544 Identities=23% Similarity=0.339 Sum_probs=450.2
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHcC-C-CCCCCc--hhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhcCCCC-eEE
Q 041450 65 GFMWNPLSWVMEAAAIMAIVLANG-G-GKPPDW--PDFVGIVVLLFINSTISFIE----ENNAGNAAAALMAGLAP-KTK 135 (949)
Q Consensus 65 ~~~~~~~~~~l~~~ail~~~l~~~-~-~~~~~~--~~~~~ii~~~~i~~~i~~~~----e~~~~~~~~~l~~~~~~-~~~ 135 (949)
.+++||+.|+++++++++++++.. . .....| .+.+.|.++++++..++.++ |+|+++++++|++..++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 468999999999999999987631 1 001122 44566777777777776666 78999999999998876 675
Q ss_pred -EEeCCeEEEEeccccCCCcEEEEcCCCeeccceeEEecCCeEEEecCCCCCCceeecCCC---CceeeceeEeeccEEE
Q 041450 136 -VLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPG---DEVFSGSTCKQGEIEA 211 (949)
Q Consensus 136 -V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g---~~v~aGs~v~~G~~~~ 211 (949)
|.|||++++|++++|+|||+|.+++||+|||||++++| ...||||+|||||.|+.|++| +.+|+||.+.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 78999999999999999999999999999999999999 569999999999999999999 8899999999999999
Q ss_pred EEEEeCchhhHHhHHHhhhccC-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCc
Q 041450 212 VVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIA 290 (949)
Q Consensus 212 ~Vi~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~a 290 (949)
+|+++|.+|++||+.++++++. +++++|.....+...+.++ ++ +++.++..+ ....++...+...+++++++|||+
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii-~l-~~~~~~~~~-~~~~~~~~~~~~~val~V~~IP~a 263 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTII-FL-VVILTMYPL-AKFLNFNLSIAMLIALAVCLIPTT 263 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHH-HH-HHHHHHHHH-HhhccHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999998764 7788886665543322111 11 111111111 111234456677788888999999
Q ss_pred hhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccc
Q 041450 291 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRV 370 (949)
Q Consensus 291 L~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~ 370 (949)
||..++++.+.|+.+|+++|+++|+.+++|+||++|++|||||||||+|++.+.+... ..+.+.++++..++.|+..
T Consensus 264 L~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~~ 340 (673)
T PRK14010 264 IGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSIA 340 (673)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999998877766432 2345566777777777654
Q ss_pred cCCChhHHHHHHhccChhhhhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcCch-HHHHHHHHHH
Q 041450 371 ENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLKG-EMRRKAHQII 449 (949)
Q Consensus 371 ~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~~~~i 449 (949)
. .||++.|++.++..... .......+++||++++|+|++.+ +|+ .+.||+++.++++|...+ ..+..+.+..
T Consensus 341 s-~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~ 413 (673)
T PRK14010 341 D-DTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALV 413 (673)
T ss_pred C-CChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHH
Confidence 4 49999999987642210 00011235689999999999864 343 466999999999996422 2234466677
Q ss_pred HHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCC
Q 041450 450 DNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGM 529 (949)
Q Consensus 450 ~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi 529 (949)
++++++|+|+++++. +++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++|+
T Consensus 414 ~~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 414 KGVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred HHHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 889999999999864 3489999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEecc
Q 041450 530 GTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVAD 609 (949)
Q Consensus 530 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~ 609 (949)
. ++|||++||||.++|+.+|++|++|+|+|||+||+|||++||||||||+
T Consensus 481 ~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgs 530 (673)
T PRK14010 481 D------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNS 530 (673)
T ss_pred c------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCC
Confidence 4 3699999999999999999999999999999999999999999999999
Q ss_pred chHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041450 610 ATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLV 665 (949)
Q Consensus 610 g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~ 665 (949)
|+|+||++||+||+++||++|++++++||++|.|+++++.|.++.|+..++..+..
T Consensus 531 GTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a 586 (673)
T PRK14010 531 GTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPA 586 (673)
T ss_pred CCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999766554443
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-95 Score=878.97 Aligned_cols=792 Identities=18% Similarity=0.206 Sum_probs=597.9
Q ss_pred HHHhcCCCcccccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 041450 43 RLQIFGYNKLEEKKESKL----LKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENN 118 (949)
Q Consensus 43 r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~ii~~~~i~~~i~~~~e~~ 118 (949)
+...|-.|++.+.||+.+ +.+++||.++.|++|++.++++++. .++...|...+++++++.++++.+.+++++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip---~~~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP---LSPFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc---ccccCccceeeceeeeehHHHHHHHHhhhh
Confidence 555999999999999875 7889999999999999999999985 234557888899999999999999999999
Q ss_pred HHHHHHHHhcCCCCeEEEEeCCe-EEEEeccccCCCcEEEEcCCCeeccceeEEecC----CeEEEecCCCCCCceeecC
Q 041450 119 AGNAAAALMAGLAPKTKVLRDEK-WSEQEAEILVPGDIISIKLGDIVPADARLLEGD----PLKIDQAALTGESLPVTKN 193 (949)
Q Consensus 119 ~~~~~~~l~~~~~~~~~V~rdg~-~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~~~Vdes~LTGEs~pv~K~ 193 (949)
+++...++++ .++.|.|++. +++..|++|+|||+|++..++.+|||.+|++++ .|+|++++|+||++++.|+
T Consensus 105 R~~~D~~iN~---~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEVNN---RKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHhhc---ceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 9999887655 7899998644 899999999999999999999999999999664 4999999999999999885
Q ss_pred C-----------------------------------------------CCceeeceeEeecc-EEEEEEEeCchhhHHhH
Q 041450 194 P-----------------------------------------------GDEVFSGSTCKQGE-IEAVVIATGVHTFFGKA 225 (949)
Q Consensus 194 ~-----------------------------------------------g~~v~aGs~v~~G~-~~~~Vi~tG~~T~~gki 225 (949)
. .+.+++|+++++++ +.|+|+.||.+|++++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 4 13578999999987 89999999999998653
Q ss_pred HHhhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------------C-----cHHHHHHHHHHHHHhhc
Q 041450 226 AHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQR-------------R-----SYRDGIDNLLVLLIGGI 287 (949)
Q Consensus 226 ~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~-------------~-----~~~~~i~~~l~ll~~~i 287 (949)
. -..+.+++.+++.+|.+...+++..++.+++..+....... . .....+..+++++...+
T Consensus 262 ~--~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 S--GKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred c--CCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 2 23446888899999988776555544444443332211111 0 11224567788999999
Q ss_pred CCchhHHHHHHHHHHHHHHh----------hCCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCCCh
Q 041450 288 PIAMPTVLSVTMAIGSHRLS----------QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDS 357 (949)
Q Consensus 288 P~aL~~~~~i~~~~~~~~l~----------~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~ 357 (949)
|++|++.+++....++..+. ..++.+|+.+..|+||+|++|++|||||||+|.|++.+|.+++..++...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 99999999999999885443 44789999999999999999999999999999999999988644332110
Q ss_pred --------------------------------------------HHHHHHHHHhccccC-------------CChhHHHH
Q 041450 358 --------------------------------------------DGLLLAAARASRVEN-------------QDAIDASI 380 (949)
Q Consensus 358 --------------------------------------------~~~l~~~a~~~~~~~-------------~~~~~~ai 380 (949)
.++.+..|.|+.... +.|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 134566677765432 35667777
Q ss_pred HHhccChhh----------------hhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhc-CchHHHH
Q 041450 381 VGMLADPKE----------------ARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCG-LKGEMRR 443 (949)
Q Consensus 381 ~~~~~~~~~----------------~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~-~~~~~~~ 443 (949)
+..+++..- ....|++++.+||+|.||||||++++++|+..++||||+.+|++++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 766532110 13578999999999999999999999999999999999999999998 5567788
Q ss_pred HHHHHHHHHHHhcCeEEEEEEeecCCccc-------------------------cCCCCCceEEEEEecCCCCCcchHHH
Q 041450 444 KAHQIIDNFAERGLRALGVGRQTVPEKTK-------------------------ESEGSPWEFVGLLPLFDPPRHDSAET 498 (949)
Q Consensus 444 ~~~~~i~~~a~~GlR~l~~a~~~~~~~~~-------------------------~~~e~~l~llG~~~i~D~lr~~~~~~ 498 (949)
+..+++++||.+|+|||++|||.++++++ +.+|++|+++|.+++||+||+||||+
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 88999999999999999999999998763 46799999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcccc--------------------------------------
Q 041450 499 IRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-------------------------------------- 540 (949)
Q Consensus 499 I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~-------------------------------------- 540 (949)
|+.|++||||+||+|||+.+||++||.+|++..+.+....+.
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 999999999999999999999999999999976543221111
Q ss_pred -------CCccccccCCch---HHHHhH--hcceEEeeChhhHHHHHHHHhh-cCCEEEEEcCCccCHHhhhcCCceeEe
Q 041450 541 -------GQSKDESIASMP---VEELIE--KADGFAGVFPEHKYEIVKKLQE-RKHICGMTGDGVNDAPALKRADIGIAV 607 (949)
Q Consensus 541 -------~~~~~~~~~~~~---~~~~~~--~~~v~ar~sP~qK~~iV~~lq~-~g~~V~miGDG~ND~~aLk~AdVGIam 607 (949)
|......++++. +.++.. ++.+|||++|.||+.+|+..++ .+.++++||||+||++|++.|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 111111111211 112222 3458999999999999999975 489999999999999999999999999
Q ss_pred c--cchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChH----HHHHH
Q 041450 608 A--DATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALLWKFDFPPF----MILII 681 (949)
Q Consensus 608 g--~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~----~il~i 681 (949)
+ +|.+|++ +||+.+.+++|.....++ ||||.|.|+.+++.|.+++|+.+.+..+++.++.+|..+++ .+.++
T Consensus 820 sG~EGmQAvm-sSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~ly 897 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLY 897 (1151)
T ss_pred ccchhhhhhh-cccchHHHHHHHhhhhee-ecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEE
Confidence 6 7888777 999999999998776666 99999999999999999999999999999999888755443 33333
Q ss_pred -HHhhhcchhccccCCCCCC-------C-------CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCcc
Q 041450 682 -AILNDGTIMTISKDRVKPS-------P-------MPDSWKLKEIFGTGVVLGTYMALVTAFFFWLIHDTRFFTNTFNLK 746 (949)
Q Consensus 682 -~i~~~~~~~~~~~~~~~~~-------~-------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 746 (949)
.+|+.++++.++....+.+ | ....++. +.|+.+++.|+++++++|++++.++... .....|..
T Consensus 898 Nv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~-~~f~~~~~~g~~~sli~Ff~~~~~~~~~-~~~~~G~~ 975 (1151)
T KOG0206|consen 898 NVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNW-KRFWGWMLDGFYQSLVIFFLPYLVFEEQ-AVTSNGLT 975 (1151)
T ss_pred eEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccch-HHHHHHHHHHHHhheeeeeeeHhhheee-eeccCCCc
Confidence 4455666777765443332 1 1223444 4455556669999999998888877543 22222211
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHhhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHHhh---------cccccccCch
Q 041450 747 EIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVERPGVMLVGAFLVAQLLATIIAVYA---------KWEFARIEGI 817 (949)
Q Consensus 747 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 817 (949)
.+.....+.+|+.+++..+..+ .....+|.|. +++.+++.++..++..++.--. ..+++.....
T Consensus 976 ---~d~~~~G~~~~T~~Vivv~~~i-aL~~~ywT~i---~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~ 1048 (1151)
T KOG0206|consen 976 ---ADYWTLGTTVFTIIVIVVNLKI-ALETSYWTWI---NHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLS 1048 (1151)
T ss_pred ---CChhhccceEEEEEEEEEEeee-eeeehheeHH---HHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhc
Confidence 1222223333433333322221 1122233332 3344444444444433332110 1122234445
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCchhhh
Q 041450 818 GWGWAGAIWIFSIITYLPLDPLKFVIRYAQSGKAWD 853 (949)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~ 853 (949)
...+|+++++..+++++|+..+|++.+.++|.....
T Consensus 1049 ~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~ 1084 (1151)
T KOG0206|consen 1049 SPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDI 1084 (1151)
T ss_pred CchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHH
Confidence 666899999999999999999999999999887443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-90 Score=823.06 Aligned_cols=537 Identities=24% Similarity=0.324 Sum_probs=452.2
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHcC----CCC---CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-eEE
Q 041450 64 LGFMWNPLSWVMEAAAIMAIVLANG----GGK---PPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAP-KTK 135 (949)
Q Consensus 64 ~~~~~~~~~~~l~~~ail~~~l~~~----~~~---~~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~-~~~ 135 (949)
..+|+||+.++++++++++++++.. .+. ...|...+.+++.+++...++.++|+|+++++++|++..+. +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 3578999999999999999987631 111 12344444555556677778889999999999999998775 799
Q ss_pred EEeCCe-EEEEeccccCCCcEEEEcCCCeeccceeEEecCCeEEEecCCCCCCceeecCCCCc---eeeceeEeeccEEE
Q 041450 136 VLRDEK-WSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPGDE---VFSGSTCKQGEIEA 211 (949)
Q Consensus 136 V~rdg~-~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~---v~aGs~v~~G~~~~ 211 (949)
|+|||+ +++|++++|+|||+|.+++||.|||||++++| ...||||+|||||.|+.|++|+. +|+||.|.+|++.+
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999988 99999999999999999999999999999999 58999999999999999999988 99999999999999
Q ss_pred EEEEeCchhhHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCc
Q 041450 212 VVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIA 290 (949)
Q Consensus 212 ~Vi~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~a 290 (949)
+|+++|.+|++||+.++++++ .+++++|..++.+...+...+++.++..+.+.|+ .+.. .++..++++++++|||+
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~a 263 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTT 263 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccch
Confidence 999999999999999999887 4678899877776554332222222221122222 2222 37888899999999999
Q ss_pred hhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccc
Q 041450 291 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRV 370 (949)
Q Consensus 291 L~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~ 370 (949)
++..++.+...|+.+|+++|+++|+..++|+||++|++|||||||||+|+|.+.++.. ..+.+.++++..++.++..
T Consensus 264 lg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~ 340 (679)
T PRK01122 264 IGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLA 340 (679)
T ss_pred hhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999988753 2356677788888777766
Q ss_pred cCCChhHHHHHHhccCh---hhhhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcCc-hHHHHHHH
Q 041450 371 ENQDAIDASIVGMLADP---KEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLK-GEMRRKAH 446 (949)
Q Consensus 371 ~~~~~~~~ai~~~~~~~---~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~ 446 (949)
.+ ||.+.+++.++... ......++..++.||++.++++++.+ +| ..++||++|.+++.|... .+.+++++
T Consensus 341 s~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~ 414 (679)
T PRK01122 341 DE-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELD 414 (679)
T ss_pred CC-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHH
Confidence 54 89999999876431 11111244567899999988777643 34 578999999999999542 23456778
Q ss_pred HHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH
Q 041450 447 QIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRR 526 (949)
Q Consensus 447 ~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~ 526 (949)
+.+++++++|+|++++|+. ++++|+++++||+|||++++|++||++||+++|+||||+.||.++|++
T Consensus 415 ~~~~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e 481 (679)
T PRK01122 415 AAVDEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE 481 (679)
T ss_pred HHHHHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 8889999999999999973 489999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeE
Q 041450 527 LGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIA 606 (949)
Q Consensus 527 ~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa 606 (949)
+|+. +++||++||||.++|+.+|++|++|+|+|||+||+|||++||||||
T Consensus 482 lGId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIA 531 (679)
T PRK01122 482 AGVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVA 531 (679)
T ss_pred cCCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9984 3699999999999999999999999999999999999999999999
Q ss_pred eccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 041450 607 VADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITI 656 (949)
Q Consensus 607 mg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i 656 (949)
|++|+|+||++||+|++++||++|++++++||++.-.--....|++..-+
T Consensus 532 MgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 532 MNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred eCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 99999999999999999999999999999999998544455666665444
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-91 Score=802.56 Aligned_cols=743 Identities=22% Similarity=0.312 Sum_probs=556.2
Q ss_pred HHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCCCCchhHHHH
Q 041450 22 AEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGI 101 (949)
Q Consensus 22 ~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i 101 (949)
.+..+.......||+.+++.+|+..||+|.+..+..+.+..++++..||| ++|++.++..|... .+++++..|
T Consensus 148 ~~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~d------~Y~~YA~cI 220 (1140)
T KOG0208|consen 148 PRWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLAD------SYYYYAFCI 220 (1140)
T ss_pred hhhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhcc------cchhhhhHH
Confidence 33444444557899999999999999999999999999999999999999 78888777777643 355666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcC-CCeeccceeEEecCCeEEEe
Q 041450 102 VVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKL-GDIVPADARLLEGDPLKIDQ 180 (949)
Q Consensus 102 i~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~-Gd~IPaD~~ll~g~~~~Vde 180 (949)
+++.+.+...+.+|.++..+.++++.+ ....++|+|||.|++|+++|||||||+.+.+ |-..|||++|++| +|.|||
T Consensus 221 ~iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNE 298 (1140)
T KOG0208|consen 221 VIISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNE 298 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeec
Confidence 778888889999999999988888654 4568999999999999999999999999998 8899999999999 689999
Q ss_pred cCCCCCCceeecCCC-------------------CceeeceeEee------ccEEEEEEEeCchhhHHhHHHhhhccCCC
Q 041450 181 AALTGESLPVTKNPG-------------------DEVFSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQV 235 (949)
Q Consensus 181 s~LTGEs~pv~K~~g-------------------~~v~aGs~v~~------G~~~~~Vi~tG~~T~~gki~~l~~~~~~~ 235 (949)
|+|||||.|+.|.+. +.+|+||.+.+ |.+.++|++||.+|..|++.+.+-.++ +
T Consensus 299 smLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPk-P 377 (1140)
T KOG0208|consen 299 SMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPK-P 377 (1140)
T ss_pred ccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCC-C
Confidence 999999999999873 46999999986 559999999999999998777665443 2
Q ss_pred ChHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccc
Q 041450 236 GHFQKVLTAIGNFC-ICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 314 (949)
Q Consensus 236 ~~~~~~~~~i~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk 314 (949)
.+++-..+.+..+. +..+++..++...+.+...+.+....+...+.++.+.+|+|||.++++...++..||.|+||+|-
T Consensus 378 ~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCi 457 (1140)
T KOG0208|consen 378 VNFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCI 457 (1140)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEc
Confidence 33333333332221 11122222222233334567888899999999999999999999999999999999999999999
Q ss_pred cchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeecc---C--------------------C-C-ChHHHHHHHHHhcc
Q 041450 315 RMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFV---K--------------------G-T-DSDGLLLAAARASR 369 (949)
Q Consensus 315 ~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~---~--------------------~-~-~~~~~l~~~a~~~~ 369 (949)
+++.+...|+++++|||||||||++.+.+-...+.... . + . ....+....|.||.
T Consensus 458 sP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHS 537 (1140)
T KOG0208|consen 458 SPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHS 537 (1140)
T ss_pred CccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhce
Confidence 99999999999999999999999999998765431000 0 0 0 00134455566664
Q ss_pred cc------CCChhHHHHHHhcc------------------------Chhh--------hh-cCceEEeeccCCCCCccEE
Q 041450 370 VE------NQDAIDASIVGMLA------------------------DPKE--------AR-AGITEVHFLPFNPVDKRTA 410 (949)
Q Consensus 370 ~~------~~~~~~~ai~~~~~------------------------~~~~--------~~-~~~~~l~~~pF~s~~kr~s 410 (949)
.. .+||+|..+....+ +|.+ .. ..+.+++.+||+|.-+|||
T Consensus 538 L~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMS 617 (1140)
T KOG0208|consen 538 LTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMS 617 (1140)
T ss_pred eEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEE
Confidence 32 24676654433210 1111 01 1477899999999999999
Q ss_pred EEEEcC-CCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCc--------cccCCCCCceE
Q 041450 411 ITYIDS-NGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEK--------TKESEGSPWEF 481 (949)
Q Consensus 411 v~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~--------~~~~~e~~l~l 481 (949)
|++.++ +.+.+.|+|||||.|.+.|+ .+.+++.+++.++.|+.+|+|++|+|+|+++.. .++..|++++|
T Consensus 618 VIv~~~~e~~~~~ftKGaPE~I~~ic~-p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~F 696 (1140)
T KOG0208|consen 618 VIVSTGGEDKMMVFTKGAPESIAEICK-PETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEF 696 (1140)
T ss_pred EEEecCCCCceEeeccCCHHHHHHhcC-cccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhcccee
Confidence 999975 46789999999999999997 467889999999999999999999999999876 35788999999
Q ss_pred EEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCc------------------------
Q 041450 482 VGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS------------------------ 537 (949)
Q Consensus 482 lG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~------------------------ 537 (949)
+|++.+|+++|++++.+|++|++|+|+++|+||||..||+.+||+|||.......-
T Consensus 697 lGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~ 776 (1140)
T KOG0208|consen 697 LGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQT 776 (1140)
T ss_pred eEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCcc
Confidence 99999999999999999999999999999999999999999999999965321000
Q ss_pred cccCC--------cc------------ccccC-----------CchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEE
Q 041450 538 SLLGQ--------SK------------DESIA-----------SMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICG 586 (949)
Q Consensus 538 ~l~~~--------~~------------~~~~~-----------~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~ 586 (949)
...+. +. .-.++ .+.+++++.+.+|||||+|.||.++|+.+|+.|+.|+
T Consensus 777 ~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vg 856 (1140)
T KOG0208|consen 777 QFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVG 856 (1140)
T ss_pred ccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEE
Confidence 00000 00 00111 2235667788999999999999999999999999999
Q ss_pred EEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041450 587 MTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVA 666 (949)
Q Consensus 587 miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~~ 666 (949)
|||||+|||.|||+|||||+++++. |.-||.+.-.-++.+.+++.|++||+.+-.--..+.|...+.+..++..+ ..
T Consensus 857 fCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~-~L 933 (1140)
T KOG0208|consen 857 FCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVV-FL 933 (1140)
T ss_pred ecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh-ee
Confidence 9999999999999999999998543 44478888878899999999999999766655555565544443222211 12
Q ss_pred hhccCCCChHHHHHHHHhhhcc-hhccccC----CCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 041450 667 LLWKFDFPPFMILIIAILNDGT-IMTISKD----RVKPSPMPDSWKLKEIFGTGVVLGTYMALVTAFFFWLIHDTRFFTN 741 (949)
Q Consensus 667 ~~~~~~~~~~~il~i~i~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 741 (949)
..-+..++.+|.+++.++-..+ +..++.. +..+.++|...-.++++...+.+-++..+..+..+.+....+|+..
T Consensus 934 Y~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~p 1013 (1140)
T KOG0208|consen 934 YLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEP 1013 (1140)
T ss_pred eeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccccccchhhhhHHHHHHHHHHHHhhheeeccccceec
Confidence 2345678889999998887655 4444433 3345555555555566655555555555555566666666777653
Q ss_pred c-cCcccccCchhHHHHHHHHHHHHHHHHHhhhhccCCCCc
Q 041450 742 T-FNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSF 781 (949)
Q Consensus 742 ~-~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~ 781 (949)
. .++. .+......|.+|+ ++-++.+.+-..-+.+..+
T Consensus 1014 p~~~~~--~nt~s~~~T~lF~-vS~fqYi~~a~v~S~g~pf 1051 (1140)
T KOG0208|consen 1014 PNPQVD--DNTQSSDNTSLFF-VSSFQYIFIALVLSKGSPF 1051 (1140)
T ss_pred CCCCcC--cccccceeeEeee-hhHHHHHHhheeeccCCcc
Confidence 2 1211 1112223355554 3445555444444544433
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-86 Score=783.56 Aligned_cols=540 Identities=24% Similarity=0.308 Sum_probs=452.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHcC---C---CCCCCchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-eE
Q 041450 65 GFMWNPLSWVMEAAAIMAIVLANG---G---GKPPDWPDF---VGIVVLLFINSTISFIEENNAGNAAAALMAGLAP-KT 134 (949)
Q Consensus 65 ~~~~~~~~~~l~~~ail~~~l~~~---~---~~~~~~~~~---~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~-~~ 134 (949)
.||.||+.++++++++++++++.. . +....|++. +.+++.+++...++.++|+|+++++++|++..++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 478999999999999999997531 1 111246654 3344456777888889999999999999998776 48
Q ss_pred EEEe-CCeEEEEeccccCCCcEEEEcCCCeeccceeEEecCCeEEEecCCCCCCceeecCCCCc---eeeceeEeeccEE
Q 041450 135 KVLR-DEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPGDE---VFSGSTCKQGEIE 210 (949)
Q Consensus 135 ~V~r-dg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~---v~aGs~v~~G~~~ 210 (949)
+|+| ||++++|++++|+|||+|.+++||+|||||++++| .+.||||+|||||.|+.|++|+. +|+||.+.+|++.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 89999999999999999999999999999999999 68999999999999999999975 9999999999999
Q ss_pred EEEEEeCchhhHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCC
Q 041450 211 AVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPI 289 (949)
Q Consensus 211 ~~Vi~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~ 289 (949)
++|+++|.+|++||+.++++++ .+++|+|..++.+..++.+++++..+. +..+..+. ....++...+++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhCch
Confidence 9999999999999999999876 467899988777665543222221111 11111111 1233567789999999999
Q ss_pred chhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhcc
Q 041450 290 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASR 369 (949)
Q Consensus 290 aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~ 369 (949)
+++...+.+...|+.+|+++|+++|+..++|+||++|++|||||||||+|+|++.++.. ..+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcC
Confidence 98887787777899999999999999999999999999999999999999999998753 235677788888888776
Q ss_pred ccCCChhHHHHHHhccChhh--hhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcCc-hHHHHHHH
Q 041450 370 VENQDAIDASIVGMLADPKE--ARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLK-GEMRRKAH 446 (949)
Q Consensus 370 ~~~~~~~~~ai~~~~~~~~~--~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~ 446 (949)
.. +||.+.+++.++..... ....++..++.||++.++++++.+. +| ..+.||++|.+++.|... ...+.+++
T Consensus 341 ~s-~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 AD-DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred CC-CCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 54 49999999987643211 1112345678899999777665433 45 568999999999888532 23445677
Q ss_pred HHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH
Q 041450 447 QIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRR 526 (949)
Q Consensus 447 ~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~ 526 (949)
+.+++++++|+|++++|++. +++|+++++||+|||++++|++|+++||+++|+|||+..+|.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88899999999999999843 89999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeE
Q 041450 527 LGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIA 606 (949)
Q Consensus 527 ~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa 606 (949)
+|+. +++||++|+||.++|+.+|++|+.|+|+|||+||+|||++||||||
T Consensus 483 lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9984 3699999999999999999999999999999999999999999999
Q ss_pred eccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 041450 607 VADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIV 659 (949)
Q Consensus 607 mg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~ 659 (949)
|++|+++|+++||++++++||+.|++++++||+++-+....+.|.++..+.-.
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~ 585 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKY 585 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHH
Confidence 99999999999999999999999999999999999999999999887776543
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-84 Score=764.75 Aligned_cols=503 Identities=27% Similarity=0.412 Sum_probs=438.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEe-CCeEEEEeccccCCCcEEEEcCCCeeccceeEEe
Q 041450 94 DWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLR-DEKWSEQEAEILVPGDIISIKLGDIVPADARLLE 172 (949)
Q Consensus 94 ~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~r-dg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~ 172 (949)
+|.++..++++++++.+++.+-..|+.+++++|+++.|.++++++ ||++++++.++|+|||+|.++|||+||+||++++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 346778888889999999999999999999999999999997776 5669999999999999999999999999999999
Q ss_pred cCCeEEEecCCCCCCceeecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhcc-CCCChHHHHHHHHHHHHHH
Q 041450 173 GDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCIC 251 (949)
Q Consensus 173 g~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~ 251 (949)
| ...||||+|||||.|+.|.+||.|++||.+.+|.....|+++|.+|.++++.++++++ .++++.|+..|++..+++.
T Consensus 253 G-~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp 331 (713)
T COG2217 253 G-SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVP 331 (713)
T ss_pred C-cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHH
Confidence 9 5689999999999999999999999999999999999999999999999999999988 5889999999999998877
Q ss_pred HHHHHHHHHHHHHHHhcc-CcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceEEEe
Q 041450 252 SIAVGMFIEIIVMWAIQR-RSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 330 (949)
Q Consensus 252 ~i~~~~~~~~~~~~~~~~-~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~ 330 (949)
.++++.++.++ .|++.. .+|..++..++++|+++|||+|.+++|++...+..+.+++|+++|+.+++|.++++|+++|
T Consensus 332 ~vl~ia~l~f~-~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvF 410 (713)
T COG2217 332 VVLVIAALTFA-LWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVF 410 (713)
T ss_pred HHHHHHHHHHH-HHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEE
Confidence 55554444444 555544 6888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccChhhhhcCceEEeeccCCCCCccEE
Q 041450 331 DKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTA 410 (949)
Q Consensus 331 DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~s 410 (949)
|||||||+|+|+|.++.. . .+ ++++++.+++..+..++ ||++.|+++++.+.. ....+..+.+|- +...
T Consensus 411 DKTGTLT~G~p~v~~v~~--~-~~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~--~~~~~~~~~i~G----~Gv~ 479 (713)
T COG2217 411 DKTGTLTEGKPEVTDVVA--L-DG-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG--LPDVEDFEEIPG----RGVE 479 (713)
T ss_pred eCCCCCcCCceEEEEEec--C-CC-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC--CCCccceeeecc----CcEE
Confidence 999999999999998763 2 23 78889999888877766 999999999765322 111111222331 1111
Q ss_pred EEEEcCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCC
Q 041450 411 ITYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDP 490 (949)
Q Consensus 411 v~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~ 490 (949)
-. -+| ..+..|++..+.+.-. +... ..+..+.+.++|..++.++... +++|+++++|+
T Consensus 480 ~~---v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~ 537 (713)
T COG2217 480 AE---VDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADE 537 (713)
T ss_pred EE---ECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCC
Confidence 11 155 4567799988654211 1111 4566778888999988888865 89999999999
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhh
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEH 570 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 570 (949)
+|+|++++|++||+.|+++.|+||||..+|.++|+++||. +++|.+.|||
T Consensus 538 ~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~AellPed 587 (713)
T COG2217 538 LRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRAELLPED 587 (713)
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hheccCCcHH
Confidence 9999999999999999999999999999999999999994 3699999999
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHH
Q 041450 571 KYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIY 650 (949)
Q Consensus 571 K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~ 650 (949)
|.++|+.||++|++|+|+|||+||+|||++||||||||+|+|+|+++||++|++++++.++.+++.||+++++||+|+.|
T Consensus 588 K~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~ 667 (713)
T COG2217 588 KAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFW 667 (713)
T ss_pred HHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 041450 651 AVSITIRIVLG 661 (949)
Q Consensus 651 ~l~~~i~~~~~ 661 (949)
++.+|...+..
T Consensus 668 A~~yn~~~ipl 678 (713)
T COG2217 668 AFGYNAIAIPL 678 (713)
T ss_pred HHHHHHHHHHH
Confidence 99999865543
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-83 Score=708.43 Aligned_cols=769 Identities=20% Similarity=0.240 Sum_probs=544.4
Q ss_pred HHHHhcCCCcccccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCCC-CchhHHHHHHHHHHHHHHHHHHH
Q 041450 42 KRLQIFGYNKLEEKKESKL----LKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPP-DWPDFVGIVVLLFINSTISFIEE 116 (949)
Q Consensus 42 ~r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~ail~~~l~~~~~~~~-~~~~~~~ii~~~~i~~~i~~~~e 116 (949)
.++++|.+|.+...|++++ ..+.+||...+++++++.++.+++.....|.+. +|...++++.+.++-.+++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5677899999999988763 566788888888888888888887544333322 44444444444455555555555
Q ss_pred HHHHHHHHHHhcCCCCeE-EEEeCCeEEEEeccccCCCcEEEEcCCCeeccceeEEecC----CeEEEecCCCCCCceee
Q 041450 117 NNAGNAAAALMAGLAPKT-KVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGD----PLKIDQAALTGESLPVT 191 (949)
Q Consensus 117 ~~~~~~~~~l~~~~~~~~-~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~~~Vdes~LTGEs~pv~ 191 (949)
+++.+ ..++ .+. +.-|||...+ +++++++||+|.+..+++||||.++|+.+ +|.|.+-.|+||+.-+.
T Consensus 154 ~~rd~---~~Ns---e~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDR---ELNS---EKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhh---hhhh---hhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 55444 3332 333 4447776555 99999999999999999999999999542 58999999999998776
Q ss_pred cCC-----------------------------------------------CCceeeceeEeeccEEEEEEEeCchhhHHh
Q 041450 192 KNP-----------------------------------------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGK 224 (949)
Q Consensus 192 K~~-----------------------------------------------g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gk 224 (949)
|-| .|.++++|.+.+|.+.|+|++||.+|+.
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 644 3679999999999999999999999963
Q ss_pred HHHhhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHH
Q 041450 225 AAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 304 (949)
Q Consensus 225 i~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~ 304 (949)
.++.-....|.+.++..+|.+.+.+.+.+++..+ .++.....+.+|...+.+++.++...||++|-+.+.+++.+-++
T Consensus 305 vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~--vmv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~ 382 (1051)
T KOG0210|consen 305 VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSI--VMVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSW 382 (1051)
T ss_pred HhccCCcccccceeeeecccHHHHHHHHHHHHHH--HHHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhh
Confidence 1111122247788888889888876655444222 22333345678888999999999999999999999999999988
Q ss_pred HHhhC----CcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCCC------------------------
Q 041450 305 RLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTD------------------------ 356 (949)
Q Consensus 305 ~l~~~----~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~------------------------ 356 (949)
.+..+ |.++|+.+.-|+||+++++.+|||||||+|+|.++|++.....++.+
T Consensus 383 ~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~ 462 (1051)
T KOG0210|consen 383 QIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGAL 462 (1051)
T ss_pred hcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccc
Confidence 88765 67899999999999999999999999999999999987643222111
Q ss_pred ----------hHHHHHHHHHhccccCCChhHHHHHHhccChhhh-----------------------------hcCceEE
Q 041450 357 ----------SDGLLLAAARASRVENQDAIDASIVGMLADPKEA-----------------------------RAGITEV 397 (949)
Q Consensus 357 ----------~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~-----------------------------~~~~~~l 397 (949)
..+.....|.|+++.+--..|..+.+++++|+|. ...|+++
T Consensus 463 ~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL 542 (1051)
T KOG0210|consen 463 SRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQIL 542 (1051)
T ss_pred hhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEE
Confidence 0234566677777644222222344455556552 2468999
Q ss_pred eeccCCCCCccEEEEEEcC-CCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCcccc---
Q 041450 398 HFLPFNPVDKRTAITYIDS-NGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKE--- 473 (949)
Q Consensus 398 ~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~--- 473 (949)
+.+||+|+.|||.++++++ .|++..+.|||+.+|-..... .+++++.-.++|++|+|||.+|.|.+++++++
T Consensus 543 ~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe 618 (1051)
T KOG0210|consen 543 QVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFE 618 (1051)
T ss_pred EEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHH
Confidence 9999999999999999986 689999999999998877654 34666777899999999999999999987631
Q ss_pred -----------------------CCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 041450 474 -----------------------SEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMG 530 (949)
Q Consensus 474 -----------------------~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 530 (949)
.+|.+++++|+++.||++|+|++.+++.||+||||+||+|||+.+||+.||++.++.
T Consensus 619 ~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~ 698 (1051)
T KOG0210|consen 619 EAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLF 698 (1051)
T ss_pred HHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccce
Confidence 468999999999999999999999999999999999999999999999999999996
Q ss_pred CCCCCCccc--------------------------cCCccccccC--CchHHHHhHh--cceEEeeChhhHHHHHHHHhh
Q 041450 531 TNMYPSSSL--------------------------LGQSKDESIA--SMPVEELIEK--ADGFAGVFPEHKYEIVKKLQE 580 (949)
Q Consensus 531 ~~~~~~~~l--------------------------~~~~~~~~~~--~~~~~~~~~~--~~v~ar~sP~qK~~iV~~lq~ 580 (949)
.......++ .|...+.++. ..++.|+... +.++|||+|+||+++++.+|+
T Consensus 699 sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~ 778 (1051)
T KOG0210|consen 699 SRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQK 778 (1051)
T ss_pred ecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHH
Confidence 532211111 1111111100 1233343333 358999999999999999998
Q ss_pred c-CCEEEEEcCCccCHHhhhcCCceeEe-c-cchHHHHhcccccccCCChhHHHHHH-HHhHHHHHHHHHHHHHHHHHHH
Q 041450 581 R-KHICGMTGDGVNDAPALKRADIGIAV-A-DATDAARSASDIVLTEPGLSVIVSAV-LTSRAIFQRMKNYTIYAVSITI 656 (949)
Q Consensus 581 ~-g~~V~miGDG~ND~~aLk~AdVGIam-g-~g~~~a~~aaDivl~~~~l~~i~~~i-~~gR~~~~~i~~~~~~~l~~~i 656 (949)
+ |..|+++|||.||+.|+++||+||++ | +|.+|.- |||+.++++ +.+-+++ -|||..|+|-.+..+|.+-...
T Consensus 779 ~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASL-AADfSItqF--~Hv~rLLl~HGR~SYkrsa~laqfViHRGL 855 (1051)
T KOG0210|consen 779 KTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASL-AADFSITQF--SHVSRLLLWHGRNSYKRSAKLAQFVIHRGL 855 (1051)
T ss_pred hhCceEEEEcCCCccchheeecccceeeecccccccch-hccccHHHH--HHHHHHhhccccchHHHHHHHHHHHHhhhH
Confidence 6 89999999999999999999999999 5 6766655 999999764 5555444 3699999999998888655444
Q ss_pred HHHHHHHHHHh-hc----cCCCChHHHHHHHHhhhcchhccccCCCCCC----CCC---------CchhhHHHHHHHHHH
Q 041450 657 RIVLGFLLVAL-LW----KFDFPPFMILIIAILNDGTIMTISKDRVKPS----PMP---------DSWKLKEIFGTGVVL 718 (949)
Q Consensus 657 ~~~~~~~~~~~-~~----~~~~~~~~il~i~i~~~~~~~~~~~~~~~~~----~~~---------~~~~~~~~~~~~~~~ 718 (949)
.+..+..+++. ++ ++.-.-+++.+..+.+-+|..++-.|+.-.+ ..| .....+.++.| +++
T Consensus 856 ~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iw-vLI 934 (1051)
T KOG0210|consen 856 IISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIW-VLI 934 (1051)
T ss_pred HHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhh-hhH
Confidence 33322222211 11 1111223455666666667788877775322 112 23334444444 555
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccCcccccCchhHHHHHHHHHHHHHHHHHh-hhhccCCCCcccChhHHHHHHHHHHH
Q 041450 719 GTYMALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALI-FVTRSRSWSFVERPGVMLVGAFLVAQ 797 (949)
Q Consensus 719 g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~l~~~~~~~~ 797 (949)
++|+..+.+.++++...+.|+ .+.++.|..+.+...+++ +.+++| .|..+++-++++
T Consensus 935 SiYQG~vim~g~~~l~~~ef~--------------~ivaisFtaLi~tELiMVaLtv~tw--------~~~m~vae~lsL 992 (1051)
T KOG0210|consen 935 SIYQGSVIMYGALLLFDTEFI--------------HIVAISFTALILTELIMVALTVRTW--------HWLMVVAELLSL 992 (1051)
T ss_pred HHHcccHHHHHHHHHhhhhhe--------------EeeeeeeHHHHHHHHHHHhhhhhhh--------hHHHHHHHHHHH
Confidence 999988877655555543322 233555666666665553 333442 234455555444
Q ss_pred HHHHHHHHhhccccc-ccCchhHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCchhh
Q 041450 798 LLATIIAVYAKWEFA-RIEGIGWGWAGAIWIFSIITYLPLDPLKFVIRYAQSGKAW 852 (949)
Q Consensus 798 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~ 852 (949)
.+..+-..+. .+++ .-.-.+|.|++-+.+..++..+|..+.|+++|++.||...
T Consensus 993 ~~Yivsl~~l-~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYa 1047 (1051)
T KOG0210|consen 993 ALYIVSLAFL-HEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYA 1047 (1051)
T ss_pred HHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchh
Confidence 3322211111 1111 1122356666666677888889999999999999988743
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-79 Score=742.08 Aligned_cols=499 Identities=26% Similarity=0.355 Sum_probs=436.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCeeccceeEEec
Q 041450 94 DWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEG 173 (949)
Q Consensus 94 ~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 173 (949)
.|.+++.++++++++..++.+.++|+++.+++|++..+++++|+|||++++|++++|+|||+|.+++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 67888889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCCCCceeecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHH
Q 041450 174 DPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 252 (949)
Q Consensus 174 ~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~ 252 (949)
...||||+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+||+.++++++ .+++++|+.+++++.++...
T Consensus 285 -~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 -FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred -cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999999999887 47899999999999987766
Q ss_pred HHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceEEEeCC
Q 041450 253 IAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 332 (949)
Q Consensus 253 i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~DK 332 (949)
+++..++.+++.+++.+.+|..++...+++++++|||+|.++.|++...+..+++|+|+++|+.+++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 65544444444335556778888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccChhhhhcCceEEeeccCCCCCccEEE-
Q 041450 333 TGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAI- 411 (949)
Q Consensus 333 TGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv- 411 (949)
|||||+|+|+|.+... ..+.++++++.+++..+.. +.||++.|++.++... +. .+||.+..+.+.-
T Consensus 444 TGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~-s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQG-STHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 9999999999998753 2346677888877765544 4599999999876421 11 2466665555431
Q ss_pred EEE-cCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCC
Q 041450 412 TYI-DSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDP 490 (949)
Q Consensus 412 ~~~-~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~ 490 (949)
-++ ..+|+. +..|+++.+.+ ..+...+.++++.++|+|++++++.. +++|+++++|+
T Consensus 511 Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 122 224543 44588888654 12334455678899999999999843 89999999999
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhh
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEH 570 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 570 (949)
+|+|++++|++|++.|++++|+|||+..+|.++|+++||. .+++++|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999983 267789999
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHH
Q 041450 571 KYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIY 650 (949)
Q Consensus 571 K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~ 650 (949)
|.++|+.+|+. +.|+|+|||+||+|||++|||||+||+|++.++++||++++++++..++.++.+||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 041450 651 AVSITIRIVL 660 (949)
Q Consensus 651 ~l~~~i~~~~ 660 (949)
++.+|...+.
T Consensus 697 a~~~n~~~i~ 706 (741)
T PRK11033 697 ALGLKAIFLV 706 (741)
T ss_pred HHHHHHHHHH
Confidence 9999975443
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-79 Score=705.41 Aligned_cols=538 Identities=22% Similarity=0.321 Sum_probs=452.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCe-EEEEeccccCCCcEEEEcCCCeeccceeEEe
Q 041450 94 DWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEK-WSEQEAEILVPGDIISIKLGDIVPADARLLE 172 (949)
Q Consensus 94 ~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~-~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~ 172 (949)
.|.+..+++.++.+...++-....++..++..|+...|.++.++.+|+ .++|+.+.|++||+|.++||++||+||++++
T Consensus 340 fFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~ 419 (951)
T KOG0207|consen 340 FFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVD 419 (951)
T ss_pred hccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEe
Confidence 344455666777888888888888999999999999999999999997 8999999999999999999999999999999
Q ss_pred cCCeEEEecCCCCCCceeecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhccC-CCChHHHHHHHHHHHHHH
Q 041450 173 GDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCIC 251 (949)
Q Consensus 173 g~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~ 251 (949)
| +++||||.+|||+.||.|++|+.|.+||.+.+|.....++++|.||.+++|.+++++++ .+.|.|+..|+++.++..
T Consensus 420 G-ss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP 498 (951)
T KOG0207|consen 420 G-SSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVP 498 (951)
T ss_pred C-ceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCc
Confidence 9 57999999999999999999999999999999999999999999999999999999884 889999999999998776
Q ss_pred HHHHHHHHHHHHHHHhcc-----------CcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhh
Q 041450 252 SIAVGMFIEIIVMWAIQR-----------RSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIE 320 (949)
Q Consensus 252 ~i~~~~~~~~~~~~~~~~-----------~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE 320 (949)
.+++..++ .++.|.+.+ ..+..++..++++++++|||+|.++.|++...|....+++|+++|..+++|
T Consensus 499 ~Vi~lS~~-t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE 577 (951)
T KOG0207|consen 499 VVIVLSLA-TFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALE 577 (951)
T ss_pred hhhHHHHH-HHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHH
Confidence 66554433 333443322 345567888899999999999999999999999999999999999999999
Q ss_pred hhcCceEEEeCCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccChhhhhcCceEEeec
Q 041450 321 EMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFL 400 (949)
Q Consensus 321 ~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~ 400 (949)
.+.++++++||||||||+|++.|.+..+ .....+..+++.+++..+.. .+||+..|++.++............+++-
T Consensus 578 ~~hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~-SeHPig~AIv~yak~~~~~~~~~~~~~~~ 654 (951)
T KOG0207|consen 578 KAHKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESG-SEHPIGKAIVDYAKEKLVEPNPEGVLSFE 654 (951)
T ss_pred HHhcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcC-CcCchHHHHHHHHHhcccccCccccceee
Confidence 9999999999999999999999998764 33335666776666555444 45999999999986544221112222333
Q ss_pred cCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCce
Q 041450 401 PFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWE 480 (949)
Q Consensus 401 pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~ 480 (949)
.|....+...+.+ +|+. .+-|+-+++...- ....+.+...+++-...|..+.+++... +
T Consensus 655 ~~pg~g~~~~~~~---~~~~--i~iGN~~~~~r~~---~~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~ 713 (951)
T KOG0207|consen 655 YFPGEGIYVTVTV---DGNE--VLIGNKEWMSRNG---CSIPDDILDALTESERKGQTVVYVAVNG-------------Q 713 (951)
T ss_pred cccCCCcccceEE---eeeE--EeechHHHHHhcC---CCCchhHHHhhhhHhhcCceEEEEEECC-------------E
Confidence 3333332212221 3333 6778888876422 2334556777778888999999999866 8
Q ss_pred EEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhc
Q 041450 481 FVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKA 560 (949)
Q Consensus 481 llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 560 (949)
++|++.++|++|||+..+|+.||+.||++.|+||||..+|.++|+++|+.
T Consensus 714 l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------------------------ 763 (951)
T KOG0207|consen 714 LVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------------------------ 763 (951)
T ss_pred EEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc------------------------------
Confidence 99999999999999999999999999999999999999999999999963
Q ss_pred ceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHH
Q 041450 561 DGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAI 640 (949)
Q Consensus 561 ~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~ 640 (949)
+|||.+.|+||.++|+.+|++++.|+|+|||+||+|||.+|||||+|+.|+++|.++|||||+.+++..++.++..||++
T Consensus 764 ~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt 843 (951)
T KOG0207|consen 764 NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKT 843 (951)
T ss_pred eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHhhhc
Q 041450 641 FQRMKNYTIYAVSITIRIVLGFLLVALLWKFDFPPFMILIIAILNDG 687 (949)
Q Consensus 641 ~~~i~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~il~i~i~~~~ 687 (949)
+.|+|.|+.|++.+|+..+....+..+.+++.++|++--..-.+...
T Consensus 844 ~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSv 890 (951)
T KOG0207|consen 844 VKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSV 890 (951)
T ss_pred HhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhH
Confidence 99999999999999987666666666666677888865544444443
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-77 Score=702.93 Aligned_cols=473 Identities=36% Similarity=0.548 Sum_probs=416.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCeeccceeEEecCCeEEE
Q 041450 102 VVLLFINSTISFIEENNAGNAAAALMA--GLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKID 179 (949)
Q Consensus 102 i~~~~i~~~i~~~~e~~~~~~~~~l~~--~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vd 179 (949)
+++++++..++.+++++++++.+++.+ ..+++++|+|+| +++|++++|+|||+|.+++||.|||||++++| .+.||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEE
Confidence 345677888999999999999999998 778899999999 99999999999999999999999999999999 78999
Q ss_pred ecCCCCCCceeecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhccC-CCChHHHHHHHHH-HHHHHHHHHHH
Q 041450 180 QAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIG-NFCICSIAVGM 257 (949)
Q Consensus 180 es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~-~~~~~~i~~~~ 257 (949)
||+|||||.|+.|.+||.+++||.+.+|+..+.|+++|.+|..+++..++.+.. .++++++..+++. .+++++++++.
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998764 4788899999988 45444333322
Q ss_pred HHHHHHHHHhcc-C--cHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceEEEeCCCC
Q 041450 258 FIEIIVMWAIQR-R--SYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 334 (949)
Q Consensus 258 ~~~~~~~~~~~~-~--~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~DKTG 334 (949)
++ .++.|.... . +|..++..++++++++|||+||+++++++..+..+++++|+++|+++++|+||+++++||||||
T Consensus 161 ~~-~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTG 239 (499)
T TIGR01494 161 LA-VFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTG 239 (499)
T ss_pred HH-HHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCC
Confidence 22 223333222 2 3778999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccChhhhhcCceEEeeccCCCCCccEEEEEE
Q 041450 335 TLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYI 414 (949)
Q Consensus 335 TLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~ 414 (949)
|||+|+|+|.++.+. . + .....||++.+++.++... .++..||++.+++|++++.
T Consensus 240 TLT~~~~~v~~~~~~--~-~--------------~~~s~hp~~~ai~~~~~~~--------~~~~~~f~~~~~~~~~~~~ 294 (499)
T TIGR01494 240 TLTKNEMSFKKVSVL--G-G--------------EYLSGHPDERALVKSAKWK--------ILNVFEFSSVRKRMSVIVR 294 (499)
T ss_pred ccccCceEEEEEEec--C-C--------------CcCCCChHHHHHHHHhhhc--------CcceeccCCCCceEEEEEe
Confidence 999999999997642 1 0 1234599999999877521 2356799999999999887
Q ss_pred cCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCCCcc
Q 041450 415 DSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHD 494 (949)
Q Consensus 415 ~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~lr~~ 494 (949)
..++ .++||+++.+.+.|.. ..+.+++++++|+|++++|++. +++|++.++|++|+|
T Consensus 295 ~~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~ 351 (499)
T TIGR01494 295 GPDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDD 351 (499)
T ss_pred cCCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchh
Confidence 6333 4789999999998742 2334556888999999999876 799999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHH
Q 041450 495 SAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEI 574 (949)
Q Consensus 495 ~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~i 574 (949)
++++|+.|+++|++++|+|||++.+|..+|+++|+ +|+++|+||.++
T Consensus 352 ~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~ 398 (499)
T TIGR01494 352 AKETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAAL 398 (499)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHH
Confidence 99999999999999999999999999999999986 689999999999
Q ss_pred HHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 041450 575 VKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSI 654 (949)
Q Consensus 575 V~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~ 654 (949)
|+.+|++|+.|+|+|||+||+|||++|||||||+ |+++||++|+++++..++.++.+||++++++++++.|++++
T Consensus 399 v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~ 473 (499)
T TIGR01494 399 VEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAY 473 (499)
T ss_pred HHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999997 68899999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 041450 655 TIRIVLGFL 663 (949)
Q Consensus 655 ~i~~~~~~~ 663 (949)
|+..++..+
T Consensus 474 n~~~~~~a~ 482 (499)
T TIGR01494 474 NLILIPLAA 482 (499)
T ss_pred HHHHHHHHH
Confidence 987555443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-74 Score=688.03 Aligned_cols=516 Identities=26% Similarity=0.389 Sum_probs=433.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCC-eEEEEeccccCC
Q 041450 74 VMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDE-KWSEQEAEILVP 152 (949)
Q Consensus 74 ~l~~~ail~~~l~~~~~~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg-~~~~i~~~~Lv~ 152 (949)
++.++++++++++ .|.++..|+++++++..++.++++|+.+.+++|.+..+++++|+||| +++++++++|+|
T Consensus 4 l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 4 LMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCC
Confidence 4455666777765 78899999999999999999999999999999999889999999996 999999999999
Q ss_pred CcEEEEcCCCeeccceeEEecCCeEEEecCCCCCCceeecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhcc
Q 041450 153 GDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 232 (949)
Q Consensus 153 GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~ 232 (949)
||+|.+++||.|||||+|++| .+.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|.+|++.+++++.
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~ 155 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA 155 (556)
T ss_pred CCEEEECCCCEeccceEEEec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH
Confidence 999999999999999999999 5799999999999999999999999999999999999999999999999999998775
Q ss_pred -CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCc
Q 041450 233 -NQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 311 (949)
Q Consensus 233 -~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i 311 (949)
.+++++++.+++++.+++..++++.++.++ .|+....+ .++..++++++++|||+||++++++++.+.++++++|+
T Consensus 156 ~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~-~~~~~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gi 232 (556)
T TIGR01525 156 QSSKAPIQRLADRIASYYVPAVLAIALLTFV-VWLALGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGI 232 (556)
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCc
Confidence 578899999999998876655443333333 33333222 78889999999999999999999999999999999999
Q ss_pred ccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCCC--hHHHHHHHHHhccccCCChhHHHHHHhccChhh
Q 041450 312 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTD--SDGLLLAAARASRVENQDAIDASIVGMLADPKE 389 (949)
Q Consensus 312 ~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~--~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~ 389 (949)
++|+++++|.||++|++|||||||||+|+|+|.+.... .+.+ +++++.+++.++.. ..||++.|++.++.....
T Consensus 233 lvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---~~~~~~~~~~l~~a~~~e~~-~~hp~~~Ai~~~~~~~~~ 308 (556)
T TIGR01525 233 LIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPL---DDASISEEELLALAAALEQS-SSHPLARAIVRYAKKRGL 308 (556)
T ss_pred eecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEec---CCCCccHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999987631 2233 56777766665554 459999999988753211
Q ss_pred hhcCce-EEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecC
Q 041450 390 ARAGIT-EVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVP 468 (949)
Q Consensus 390 ~~~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~ 468 (949)
.... + ..+.+| .+.....+ +|. ..+..|+++.+ + .+. .+ ....++.+++++++|+|++++++..
T Consensus 309 ~~~~-~~~~~~~~----~~gi~~~~---~g~-~~~~lg~~~~~-~-~~~-~~-~~~~~~~~~~~~~~g~~~~~v~~~~-- 373 (556)
T TIGR01525 309 ELPK-QEDVEEVP----GKGVEATV---DGQ-EEVRIGNPRLL-E-LAA-EP-ISASPDLLNEGESQGKTVVFVAVDG-- 373 (556)
T ss_pred Cccc-ccCeeEec----CCeEEEEE---CCe-eEEEEecHHHH-h-hcC-CC-chhhHHHHHHHhhCCcEEEEEEECC--
Confidence 0000 0 111111 11222211 331 24556888765 1 111 11 1223455677889999999999743
Q ss_pred CccccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccc
Q 041450 469 EKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDES 547 (949)
Q Consensus 469 ~~~~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aG-I~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~ 547 (949)
+++|.+.++|++|||++++|++|++.| ++++|+|||+..++..+++++|+.
T Consensus 374 -----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~----------------- 425 (556)
T TIGR01525 374 -----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID----------------- 425 (556)
T ss_pred -----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC-----------------
Confidence 899999999999999999999999999 999999999999999999999984
Q ss_pred cCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCCh
Q 041450 548 IASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGL 627 (949)
Q Consensus 548 ~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l 627 (949)
++|+++.|++|.++++.+++.++.|+|+|||.||+||+++|||||++|++++.+++.||+++.++++
T Consensus 426 -------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~ 492 (556)
T TIGR01525 426 -------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDL 492 (556)
T ss_pred -------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 3588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 041450 628 SVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVL 660 (949)
Q Consensus 628 ~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~ 660 (949)
+.++.++++||+++++|++++.|++.+|+..+.
T Consensus 493 ~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~ 525 (556)
T TIGR01525 493 SSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIP 525 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999986543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-74 Score=685.28 Aligned_cols=498 Identities=29% Similarity=0.405 Sum_probs=425.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCC
Q 041450 74 VMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPG 153 (949)
Q Consensus 74 ~l~~~ail~~~l~~~~~~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~G 153 (949)
++.++++++++++ +|.++.+|+++++++..++.++++|+.+.+++|.+..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 4566777777765 799999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCeeccceeEEecCCeEEEecCCCCCCceeecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhcc-
Q 041450 154 DIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 232 (949)
Q Consensus 154 DiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~- 232 (949)
|+|.+++||+|||||++++| .+.||||+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|.+||+.+++++.
T Consensus 77 Div~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 99999999999999999999 5799999999999999999999999999999999999999999999999999998775
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcc
Q 041450 233 NQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 312 (949)
Q Consensus 233 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~ 312 (949)
.+++++|+.+++++.+++..++++.++.+++.+. .. .+..++..++++++++|||+||+++++++..+..+++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGL-LK-RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 4788999999999988766655544443333332 22 233378889999999999999999999999999999999999
Q ss_pred cccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccChhhhhc
Q 041450 313 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARA 392 (949)
Q Consensus 313 vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~~~ 392 (949)
+|+++++|++|+++++|||||||||+|+|++.+... .+++.+++..+. .+.||++.|+++++.+.+
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQ-ASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhc-cCCCcHHHHHHHHHHhcC----
Confidence 999999999999999999999999999999988642 256776665444 445999999998875321
Q ss_pred CceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccc
Q 041450 393 GITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTK 472 (949)
Q Consensus 393 ~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~ 472 (949)
.....+.+|. +.+... .+|+. +..|+++.+.+.. .+.+..+|.+++.++..
T Consensus 300 ~~~~~~~~~g----~gi~~~---~~g~~--~~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~------- 350 (536)
T TIGR01512 300 NVESVEEVPG----EGVRAV---VDGGE--VRIGNPRSLEAAV-------------GARPESAGKTIVHVARD------- 350 (536)
T ss_pred CCcceEEecC----CeEEEE---ECCeE--EEEcCHHHHhhcC-------------CcchhhCCCeEEEEEEC-------
Confidence 1222222221 111111 24543 3468877653311 11456678888877653
Q ss_pred cCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCC-eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCc
Q 041450 473 ESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASM 551 (949)
Q Consensus 473 ~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI-~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~ 551 (949)
..++|.+.++|++|||++++|++|+++|+ +++|+|||+..+|..+++++|+.
T Consensus 351 ------~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--------------------- 403 (536)
T TIGR01512 351 ------GTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--------------------- 403 (536)
T ss_pred ------CEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh---------------------
Confidence 38999999999999999999999999999 99999999999999999999984
Q ss_pred hHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEec-cchHHHHhcccccccCCChhHH
Q 041450 552 PVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVA-DATDAARSASDIVLTEPGLSVI 630 (949)
Q Consensus 552 ~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~l~~i 630 (949)
++|+++.|++|.++++.++++++.|+|+|||.||+||++.||+||++| ++++.++++||+++.+++++.+
T Consensus 404 ---------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 404 ---------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ---------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 248889999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 041450 631 VSAVLTSRAIFQRMKNYTIYAVSITIRIVL 660 (949)
Q Consensus 631 ~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~ 660 (949)
.+++.+||++++++++++.|++.+|+..+.
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~ 504 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLIL 504 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999975433
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-74 Score=682.67 Aligned_cols=506 Identities=26% Similarity=0.388 Sum_probs=423.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeC-CeEEEEeccccCCCcEEEEcCCCeeccceeEEe
Q 041450 94 DWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRD-EKWSEQEAEILVPGDIISIKLGDIVPADARLLE 172 (949)
Q Consensus 94 ~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rd-g~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~ 172 (949)
+|.....++++++++..++.+.++|+.+++++|++..|.+++++|+ |++++|++++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4555566677788888999999999999999999999999999985 677999999999999999999999999999999
Q ss_pred cCCeEEEecCCCCCCceeecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhcc-CCCChHHHHHHHHHHHHHH
Q 041450 173 GDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCIC 251 (949)
Q Consensus 173 g~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~ 251 (949)
| .+.||||+|||||.|+.|++||.||+||.+.+|+++++|+++|.+|.+||+.++++++ .+++++|+..++++.+++.
T Consensus 133 g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 G-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred C-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9 5789999999999999999999999999999999999999999999999999999876 4778999999999988766
Q ss_pred HHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceEEEeC
Q 041450 252 SIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 331 (949)
Q Consensus 252 ~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~D 331 (949)
.+++..++ .++.|. .++..++++++++|||+|++++|+++..+..+++++|+++|+++++|.|+++|++|||
T Consensus 212 ~v~~~a~~-~~~~~~-------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALI-TFVIWL-------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHH-HHHHHH-------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 55443322 222332 4788999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccChhhhhcCceEEeeccCCCCCccEEE
Q 041450 332 KTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAI 411 (949)
Q Consensus 332 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv 411 (949)
||||||+|+|++.++.. ..+.++++++.+++..+...+ ||++.|++.++.............+.+| .+.+..
T Consensus 284 KTGTLT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s~-HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHV---FGDRDRTELLALAAALEAGSE-HPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEE
Confidence 99999999999998753 224567788888776665554 9999999988743211111111112221 122222
Q ss_pred EEEcCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCC
Q 041450 412 TYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPP 491 (949)
Q Consensus 412 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~l 491 (949)
.+ +| ..+..|+++.+.+... . +.++.++|.+++.++... +++|.+.++|++
T Consensus 356 ~~---~g--~~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 TV---EG--TKIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred EE---CC--EEEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 21 44 3466799888643211 1 112457899999887643 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhH
Q 041450 492 RHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHK 571 (949)
Q Consensus 492 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK 571 (949)
|||++++|++|++.|++++|+|||+..++..+++++|+. +|+++.|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999982 4788899999
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHH
Q 041450 572 YEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYA 651 (949)
Q Consensus 572 ~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~ 651 (949)
.++++.++++++.|+|+|||.||+||+++||+||+||.|++.++++||+++.++++..++.++..||+++++|++++.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCChH
Q 041450 652 VSITIRIVLGFLLVALLWKFDFPPF 676 (949)
Q Consensus 652 l~~~i~~~~~~~~~~~~~~~~~~~~ 676 (949)
+.+|+..+...+...+.+++.++|+
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCCC
Confidence 9999876554444444445455553
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-73 Score=706.27 Aligned_cols=520 Identities=23% Similarity=0.312 Sum_probs=436.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCeeccceeEEecC
Q 041450 95 WPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGD 174 (949)
Q Consensus 95 ~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~ 174 (949)
|.++..+++++.++..++.+.+.|+.+++++|++..|++++++|||++++|+.++|+|||+|.+++||+|||||+|++|
T Consensus 286 ~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g- 364 (834)
T PRK10671 286 YEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG- 364 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc-
Confidence 3446778888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEecCCCCCCceeecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHHH
Q 041450 175 PLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSI 253 (949)
Q Consensus 175 ~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i 253 (949)
.+.||||+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+||+.++++++ ..++++|+..++++.+++.++
T Consensus 365 ~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v 444 (834)
T PRK10671 365 EAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVV 444 (834)
T ss_pred eEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999876 467899999999998876555
Q ss_pred HHHHHHHHHHHHHhccCc--HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceEEEeC
Q 041450 254 AVGMFIEIIVMWAIQRRS--YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 331 (949)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~--~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~D 331 (949)
+++.++ .++.|++.+.. +..++..++++++++|||||++++|+++..+..+++++|+++|+++++|+|+++|++|||
T Consensus 445 ~~~a~~-~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fD 523 (834)
T PRK10671 445 VVIALV-SAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFD 523 (834)
T ss_pred HHHHHH-HHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEc
Confidence 443333 33344433322 556788899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccChhhhhcCceEEeeccCCCCCccEEE
Q 041450 332 KTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAI 411 (949)
Q Consensus 332 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv 411 (949)
||||||+|+|+|.+... ..+.++++++..++..++.. .||++.|++..+.+. ... +..+|.....+ .+
T Consensus 524 KTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s-~hp~a~Ai~~~~~~~-----~~~--~~~~~~~~~g~-Gv 591 (834)
T PRK10671 524 KTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGS-SHPLARAILDKAGDM-----TLP--QVNGFRTLRGL-GV 591 (834)
T ss_pred CCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHhhC-----CCC--CcccceEecce-EE
Confidence 99999999999988652 23456777777777666544 499999998876421 110 01122222211 11
Q ss_pred EEEcCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCC
Q 041450 412 TYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPP 491 (949)
Q Consensus 412 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~l 491 (949)
... .+|+ .+.+|+++.+.+... . .+.+.+.++++.++|.+++.++++. +++|++.+.|++
T Consensus 592 ~~~-~~g~--~~~~G~~~~~~~~~~-~---~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~ 651 (834)
T PRK10671 592 SGE-AEGH--ALLLGNQALLNEQQV-D---TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPL 651 (834)
T ss_pred EEE-ECCE--EEEEeCHHHHHHcCC-C---hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcc
Confidence 111 2453 456799998754221 1 2345566778889999999999854 799999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhH
Q 041450 492 RHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHK 571 (949)
Q Consensus 492 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK 571 (949)
|||++++|++|++.|+++.|+|||+..+|..+++++|+. ++|+++.|++|
T Consensus 652 r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~~~~~~~p~~K 701 (834)
T PRK10671 652 RSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------EVIAGVLPDGK 701 (834)
T ss_pred hhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------EEEeCCCHHHH
Confidence 999999999999999999999999999999999999984 35899999999
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHH
Q 041450 572 YEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYA 651 (949)
Q Consensus 572 ~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~ 651 (949)
.++++.+|.+++.|+|+|||.||+|||+.||+||+||+|++.++++||+++++++++.|+.++++||+++++|++|+.|+
T Consensus 702 ~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a 781 (834)
T PRK10671 702 AEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGA 781 (834)
T ss_pred HHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh-ccCCCChHHH
Q 041450 652 VSITIRIVLGFLLVALL-WKFDFPPFMI 678 (949)
Q Consensus 652 l~~~i~~~~~~~~~~~~-~~~~~~~~~i 678 (949)
+.+|+..+...++.... +++.++|+.-
T Consensus 782 ~~yn~~~i~~a~g~~~p~~g~~l~p~~a 809 (834)
T PRK10671 782 FIYNSLGIPIAAGILWPFTGTLLNPVVA 809 (834)
T ss_pred HHHHHHHHHHHHhchhhhhhcccCHHHH
Confidence 99998655433322211 2334676643
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-73 Score=638.47 Aligned_cols=656 Identities=23% Similarity=0.285 Sum_probs=472.2
Q ss_pred CCHHHHHHHcCCCCCCCCH-HHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCCCCchh
Q 041450 19 IPVAEVFEQLKCTPKGLTT-AEGEKRLQIFGYNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPD 97 (949)
Q Consensus 19 ~~~~~~~~~l~~~~~GLt~-~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~ 97 (949)
.|.++-+..++. .+|+.. +|+..-.++||.|+.+...+++-..|.+.-..|| ++|++..+..|.+. .+|+.
T Consensus 148 fp~~~~~g~~~k-~~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPf-FVFQVFcvgLWCLD------eyWYy 219 (1160)
T KOG0209|consen 148 FPTDEPFGYFQK-STGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPF-FVFQVFCVGLWCLD------EYWYY 219 (1160)
T ss_pred cCcCCcchhhhh-ccCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCce-eeHhHHhHHHHHhH------HHHHH
Confidence 444544444433 346653 4455555669999999999999999999999999 78899999989986 47888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcC---CCeeccceeEEecC
Q 041450 98 FVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKL---GDIVPADARLLEGD 174 (949)
Q Consensus 98 ~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~---Gd~IPaD~~ll~g~ 174 (949)
.+.-+++++....--..|+.+.-+.... |..-+..+.|+|+++|+.+..+||.|||+|.+.. ...||||.+|+.|
T Consensus 220 SlFtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G- 297 (1160)
T KOG0209|consen 220 SLFTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG- 297 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec-
Confidence 7776666655433333444444333333 2234557899999999999999999999999987 5689999999999
Q ss_pred CeEEEecCCCCCCceeecCC-----------------CCceeeceeEee-------------ccEEEEEEEeCchhhHHh
Q 041450 175 PLKIDQAALTGESLPVTKNP-----------------GDEVFSGSTCKQ-------------GEIEAVVIATGVHTFFGK 224 (949)
Q Consensus 175 ~~~Vdes~LTGEs~pv~K~~-----------------g~~v~aGs~v~~-------------G~~~~~Vi~tG~~T~~gk 224 (949)
+|.|||++|||||.|.-|.+ ..++|.||.+.+ |-+.+.|++||.+|..|+
T Consensus 298 sciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 298 SCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred ceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCc
Confidence 68899999999999999977 237999999986 559999999999999998
Q ss_pred HHHhhhc-cCCCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---c----CcHHHHHHHHHHHHHhhcCCchhHH
Q 041450 225 AAHLVDS-TNQVG--HFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQ---R----RSYRDGIDNLLVLLIGGIPIAMPTV 294 (949)
Q Consensus 225 i~~l~~~-~~~~~--~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~---~----~~~~~~i~~~l~ll~~~iP~aL~~~ 294 (949)
+.+.+-- +++.+ ..+.. .+++.+++ ++ +...++.+ . ++-...+..+..++...+|..||+-
T Consensus 378 LvRtilf~aervTaNn~Etf------~FILFLlV--FA-iaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmE 448 (1160)
T KOG0209|consen 378 LVRTILFSAERVTANNRETF------IFILFLLV--FA-IAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPME 448 (1160)
T ss_pred eeeeEEecceeeeeccHHHH------HHHHHHHH--HH-HHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchh
Confidence 7765432 33222 22211 11111111 11 12222222 1 2222345566777888999999999
Q ss_pred HHHHHHHHHHHHhhCCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCC------CChHHHHHHHHHhc
Q 041450 295 LSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKG------TDSDGLLLAAARAS 368 (949)
Q Consensus 295 ~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~------~~~~~~l~~~a~~~ 368 (949)
++++.-.+...|+|.+++|..+-.+.-.|++|+.|||||||||+..|.|..+--.....+ .-+.+-+...|.||
T Consensus 449 LSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscH 528 (1160)
T KOG0209|consen 449 LSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCH 528 (1160)
T ss_pred hhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHH
Confidence 999998889999999999999999999999999999999999999999987531000000 01222344444554
Q ss_pred cc------cCCChhHHHHHHhccChhh----------hhcCceEEeeccCCCCCccEEEEEEcC----CCcEEEEecCch
Q 041450 369 RV------ENQDAIDASIVGMLADPKE----------ARAGITEVHFLPFNPVDKRTAITYIDS----NGDWHRTSKGAP 428 (949)
Q Consensus 369 ~~------~~~~~~~~ai~~~~~~~~~----------~~~~~~~l~~~pF~s~~kr~sv~~~~~----~g~~~~~~KGa~ 428 (949)
.. --+||+++|.+..++..-+ ...+.++.+.+.|+|.-|||+++.... +-+++..+||||
T Consensus 529 sLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAP 608 (1160)
T KOG0209|consen 529 SLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAP 608 (1160)
T ss_pred HHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCH
Confidence 32 2359999999988742211 122477788899999999999887532 136788999999
Q ss_pred HHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCC--------ccccCCCCCceEEEEEecCCCCCcchHHHHH
Q 041450 429 EQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPE--------KTKESEGSPWEFVGLLPLFDPPRHDSAETIR 500 (949)
Q Consensus 429 e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~--------~~~~~~e~~l~llG~~~i~D~lr~~~~~~I~ 500 (949)
|.|.++.. +++..+++...+|+++|.||||++||.++. -.+|+.|++|+|.|++.|.-|+|+|++++|+
T Consensus 609 Evi~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~ 685 (1160)
T KOG0209|consen 609 EVIQEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIK 685 (1160)
T ss_pred HHHHHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHH
Confidence 99998875 567888888999999999999999999873 2367899999999999999999999999999
Q ss_pred HHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcc---------------------------------------ccC
Q 041450 501 RALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSS---------------------------------------LLG 541 (949)
Q Consensus 501 ~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~---------------------------------------l~~ 541 (949)
.|++++++++||||||+.||.++|+++|+..+..+... ++|
T Consensus 686 el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG 765 (1160)
T KOG0209|consen 686 ELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITG 765 (1160)
T ss_pred HHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcch
Confidence 99999999999999999999999999999654111000 011
Q ss_pred CccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHH-----H-
Q 041450 542 QSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAA-----R- 615 (949)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a-----~- 615 (949)
...+.....+.+.+++.++.||||+.|.||..++..+++.|+.++|||||.||+.|||+||||||+-+++.-+ +
T Consensus 766 ~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~ 845 (1160)
T KOG0209|consen 766 SALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKR 845 (1160)
T ss_pred hHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhh
Confidence 1111111222455666778899999999999999999999999999999999999999999999984322200 0
Q ss_pred -h-------c---------------------------------------------------ccccccC------CChhHH
Q 041450 616 -S-------A---------------------------------------------------SDIVLTE------PGLSVI 630 (949)
Q Consensus 616 -~-------a---------------------------------------------------aDivl~~------~~l~~i 630 (949)
+ + .|..+.. .+.+++
T Consensus 846 ~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v 925 (1160)
T KOG0209|consen 846 RKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSV 925 (1160)
T ss_pred hhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHH
Confidence 0 0 0222221 256778
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHhhhcchhccccCCC
Q 041450 631 VSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALLWKFDFPPFMILIIAILNDGTIMTISKDRV 697 (949)
Q Consensus 631 ~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~il~i~i~~~~~~~~~~~~~~ 697 (949)
-+.|+.||++.-..-+.... ++.|-.+..........-|.-|+..|..+-.++....-+.++-.++
T Consensus 926 ~~IIrQGRctLVtTlQMfKI-LALN~LisAYslSvlyldGVKfgD~QaTisGlLla~cFlfISrskP 991 (1160)
T KOG0209|consen 926 THIIRQGRCTLVTTLQMFKI-LALNCLISAYSLSVLYLDGVKFGDTQATISGLLLAACFLFISRSKP 991 (1160)
T ss_pred HHHHHhcchhHHHHHHHHHH-HHHHHHHHHHHHHHhhhcCceecchhHhHHHHHHHHHHhheecCCc
Confidence 88999999987665443221 2223222212222233445678888888888777666566655444
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-61 Score=526.20 Aligned_cols=520 Identities=25% Similarity=0.364 Sum_probs=403.2
Q ss_pred HHHhHHHHHHHHHHHHHHHHH----cCCCCCCCchhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhcCC-CCeEEE
Q 041450 66 FMWNPLSWVMEAAAIMAIVLA----NGGGKPPDWPDFVGIVVLLFINST----ISFIEENNAGNAAAALMAGL-APKTKV 136 (949)
Q Consensus 66 ~~~~~~~~~l~~~ail~~~l~----~~~~~~~~~~~~~~ii~~~~i~~~----i~~~~e~~~~~~~~~l~~~~-~~~~~V 136 (949)
+.+||..++-++.+++..++. ..++....+.....|.+++++..+ -+.+.|-|.+-..+.|++.. ...+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 467888777777777766322 112211233333333333333333 34444555444445555422 234666
Q ss_pred EeC-CeEEEEeccccCCCcEEEEcCCCeeccceeEEecCCeEEEecCCCCCCceeecCCC---CceeeceeEeeccEEEE
Q 041450 137 LRD-EKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPG---DEVFSGSTCKQGEIEAV 212 (949)
Q Consensus 137 ~rd-g~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g---~~v~aGs~v~~G~~~~~ 212 (949)
+++ |.++.+++.+|+.||+|.++.||+||+||.+++| ..+||||++||||.||-|.+| +.|-.||.+.+..++..
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 665 8999999999999999999999999999999999 678999999999999999998 67999999999999999
Q ss_pred EEEeCchhhHHhHHHhhhccC-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCcHHHHHHHHHHHHHhhcCC
Q 041450 213 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAI--QRRSYRDGIDNLLVLLIGGIPI 289 (949)
Q Consensus 213 Vi~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~i~~~l~ll~~~iP~ 289 (949)
+++.-.+|++-|+..+++.+. +++|-+-.++.+..- +.++++++ ..-.|.+ +...-.-.+...++++++.+|-
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~---LTliFL~~-~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPT 263 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSG---LTLIFLLA-VATLYPFAIYSGGGAASVTVLVALLVCLIPT 263 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHH---HHHHHHHH-HHhhhhHHHHcCCCCcCHHHHHHHHHHHhcc
Confidence 999999999999999998763 555544333322111 11111111 1111211 1101113466788999999999
Q ss_pred chhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhcc
Q 041450 290 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASR 369 (949)
Q Consensus 290 aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~ 369 (949)
...--++..-..|+.|+.+.|++.++..++|..|.+|++..|||||+|.|+-.-.++++ ..+.+.+++...+..+|-
T Consensus 264 TIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p---~~gv~~~~la~aa~lsSl 340 (681)
T COG2216 264 TIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIP---VPGVSEEELADAAQLASL 340 (681)
T ss_pred cHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheec---CCCCCHHHHHHHHHHhhh
Confidence 98888888888899999999999999999999999999999999999998866666653 457888887776665554
Q ss_pred ccCCChhHHHHHHhccChh-hhh-cCce-EEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcCch-HHHHHH
Q 041450 370 VENQDAIDASIVGMLADPK-EAR-AGIT-EVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLKG-EMRRKA 445 (949)
Q Consensus 370 ~~~~~~~~~ai~~~~~~~~-~~~-~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~ 445 (949)
..+.|..++++..+.... +.+ .... ..+++||+.+.+...+-. ++| ..+.|||.+.+.+..+..+ ..++.+
T Consensus 341 -~DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l 415 (681)
T COG2216 341 -ADETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDL 415 (681)
T ss_pred -ccCCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHH
Confidence 344777788887764321 111 1111 357899998776555432 233 5678999999999886443 478889
Q ss_pred HHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHH
Q 041450 446 HQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGR 525 (949)
Q Consensus 446 ~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~ 525 (949)
++..++-++.|-..|+++... +++|++.++|-++||.+|-+.+||+.|||.+|+||||+.||..||+
T Consensus 416 ~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 416 DAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 999999999999999998755 8999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCcee
Q 041450 526 RLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGI 605 (949)
Q Consensus 526 ~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGI 605 (949)
+.|.++ ..|+++||+|.++|+.-|.+|+.|+|||||.||+|||.+||||+
T Consensus 483 EAGVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~ 532 (681)
T COG2216 483 EAGVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 532 (681)
T ss_pred HhCchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhh
Confidence 999852 47999999999999999999999999999999999999999999
Q ss_pred EeccchHHHHhcccccccCCChhHHHHHHHHhHHHH
Q 041450 606 AVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIF 641 (949)
Q Consensus 606 amg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~ 641 (949)
||.+|+++||||+.+|=+|.|...+.+.++.|++..
T Consensus 533 AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 533 AMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred hhccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 999999999999999999999999999999999864
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=311.45 Aligned_cols=221 Identities=35% Similarity=0.532 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCe-EEEEeCCeEEEEeccccCCCcEEEEcCCCeeccceeEEecCCeEE
Q 041450 100 GIVVLLFINSTISFIEENNAGNAAAALMAGLAPK-TKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKI 178 (949)
Q Consensus 100 ~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~-~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~V 178 (949)
+|+++++++..+++++++++++.++++++..+++ ++|+|||++++++++||+|||+|.|++||.+||||++++.+.+.|
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~v 80 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEE
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccccc
Confidence 3567888899999999999999999999988887 999999999999999999999999999999999999999337999
Q ss_pred EecCCCCCCceeecC-----CCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhccC-CCChHHHHHHHHHHHHHHH
Q 041450 179 DQAALTGESLPVTKN-----PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 252 (949)
Q Consensus 179 des~LTGEs~pv~K~-----~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~~ 252 (949)
|||.+|||+.|+.|. +|+.+|+||.+.+|.+.++|++||.+|..|++.+...... +++++++.++++..+++..
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 9999999999999999999999999999999999887664 5689999999999887665
Q ss_pred HHHHHHHHHHHHHHh--ccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhh
Q 041450 253 IAVGMFIEIIVMWAI--QRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 321 (949)
Q Consensus 253 i~~~~~~~~~~~~~~--~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~ 321 (949)
++++.++.+ +.|+. ...++...+..++++++++||++||+++++++..++++|+++|+++|+++++|+
T Consensus 161 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVF-IIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHH-HHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhh-ccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 555444333 33333 466777889999999999999999999999999999999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=236.45 Aligned_cols=211 Identities=31% Similarity=0.417 Sum_probs=151.0
Q ss_pred ceEEEeCCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccChhhhhcCceEEeeccCCC
Q 041450 325 MDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNP 404 (949)
Q Consensus 325 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s 404 (949)
|++||||||||||+|++.+ . . .+...++..+..... ...||+..++.......... .. ..+|..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---~---~~~~~~~~~~~~~~~-~s~~p~~~~~~~~~~~~~~~-~~-----~~~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---P---PSNEAALAIAAALEQ-GSEHPIGKAIVEFAKNHQWS-KS-----LESFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---S---CSHHHHHHHHHHHHC-TSTSHHHHHHHHHHHHHHHH-SC-----CEEEEE
T ss_pred CeEEEEecCCCcccCeEEE---E---e---ccHHHHHHHHHHhhh-cCCCcchhhhhhhhhhccch-hh-----hhhhee
Confidence 6899999999999999998 1 1 445555555544433 34499999998877543221 11 112222
Q ss_pred CCccEEEEEEcCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEE
Q 041450 405 VDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGL 484 (949)
Q Consensus 405 ~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~ 484 (949)
...+...... ++. +. |+++.+.+..... ... .........+|...+.++. +++++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV--ISP--DLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH--HHH--HHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc--ccc--chhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 2222221111 122 22 8888876654321 111 1112223445555666654 4589999
Q ss_pred EecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEE
Q 041450 485 LPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFA 564 (949)
Q Consensus 485 ~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 564 (949)
+.+.|++|+|++++|+.|+++|++++|+|||+..+|.++++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999942 23799
Q ss_pred ee--ChhhH--HHHHHHHhhcCCEEEEEcCCccCHHhhhcCC
Q 041450 565 GV--FPEHK--YEIVKKLQERKHICGMTGDGVNDAPALKRAD 602 (949)
Q Consensus 565 r~--sP~qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~Ad 602 (949)
++ +|++| .++++.+|.+++.|+|+|||+||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.9e-15 Score=135.57 Aligned_cols=115 Identities=27% Similarity=0.388 Sum_probs=104.8
Q ss_pred eEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHh
Q 041450 480 EFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEK 559 (949)
Q Consensus 480 ~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 559 (949)
...+.++---++=++++++|++|++. +++++.|||...+....|.-.||...
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 56788888888999999999999999 99999999999999999999998642
Q ss_pred cceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEe-c--cchHHHHhccccccc
Q 041450 560 ADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAV-A--DATDAARSASDIVLT 623 (949)
Q Consensus 560 ~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam-g--~g~~~a~~aaDivl~ 623 (949)
.+|+..-|+.|.++++.|++++++|.|+|||+||.+||++||+||.. + +..+-+.++||+++-
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik 137 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK 137 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh
Confidence 47999999999999999999999999999999999999999999986 4 456778899999985
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.4e-11 Score=133.10 Aligned_cols=210 Identities=17% Similarity=0.200 Sum_probs=146.7
Q ss_pred CceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc------cC----------
Q 041450 478 PWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL------LG---------- 541 (949)
Q Consensus 478 ~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l------~~---------- 541 (949)
+-.|.|++....+.+++....|+.|-++-|+.+-.+-.+..-.+-.|.++||.........+ .|
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 34799999999999999999999999999999999999999999999999996532111000 00
Q ss_pred ---------------------Ccccc-----------cc--------CCchH-----------------HHHhHhcceEE
Q 041450 542 ---------------------QSKDE-----------SI--------ASMPV-----------------EELIEKADGFA 564 (949)
Q Consensus 542 ---------------------~~~~~-----------~~--------~~~~~-----------------~~~~~~~~v~a 564 (949)
...+. .+ .+.++ +++..-+..|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 00000 00 00011 11111123688
Q ss_pred eeChhhHHHHHHHHhhcCCEEEEEcCCccCH--HhhhcCCceeEecc-------------chHHHH-hcc----------
Q 041450 565 GVFPEHKYEIVKKLQERKHICGMTGDGVNDA--PALKRADIGIAVAD-------------ATDAAR-SAS---------- 618 (949)
Q Consensus 565 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~--~aLk~AdVGIamg~-------------g~~~a~-~aa---------- 618 (949)
.++|+.-.++++.+|++|++|+.+|.-+|-. -..-+|||+|++.+ ++.... +++
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSg 1053 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISG 1053 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecc
Confidence 9999999999999999999999999999843 34578999999841 111111 122
Q ss_pred -------cccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhccCCCChHHHHHHHHhhhc
Q 041450 619 -------DIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF-LLVALLWKFDFPPFMILIIAILNDG 687 (949)
Q Consensus 619 -------Divl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~-~~~~~~~~~~~~~~~il~i~i~~~~ 687 (949)
|+-+-+..+-.+..+|+-+|....-+|+.++|.+.......+.. +...++.|..|+--+++|...|--.
T Consensus 1054 qLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~P 1130 (1354)
T KOG4383|consen 1054 QLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIP 1130 (1354)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHH
Confidence 33333334557788888899999999999999988877654443 4444566777777788888877644
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.9e-12 Score=109.31 Aligned_cols=67 Identities=33% Similarity=0.479 Sum_probs=61.3
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccc-ccccchHHHHHHHHHhHHHHHHHHHHHHH
Q 041450 16 LERIPVAEVFEQLKCT-PKGLTTAEGEKRLQIFGYNKLE-EKKESKLLKFLGFMWNPLSWVMEAAAIMA 82 (949)
Q Consensus 16 ~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~-~~~~~~~~~~~~~~~~~~~~~l~~~ail~ 82 (949)
||.++.+++++.|+++ .+|||++|+++|+++||+|.++ .++.++|..|+++|.+|+.+++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7899999999999965 8999999999999999999995 55688899999999999999999999886
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.2e-09 Score=110.07 Aligned_cols=166 Identities=17% Similarity=0.182 Sum_probs=114.3
Q ss_pred cCCCChHHHHHHHHhhhcc-hhccccCCCCCCC-------CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 041450 670 KFDFPPFMILIIAILNDGT-IMTISKDRVKPSP-------MPDSWKLKEIFGTGVVLGTYMALVTAFFFWLIHDTRFFTN 741 (949)
Q Consensus 670 ~~~~~~~~il~i~i~~~~~-~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 741 (949)
|.|++|+|++|+|+++|.+ ++++++|+++++. +.++.-.++++...+..|+++++++++.|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 5689999999999999998 7999999886542 12333446677777999999999999888766531
Q ss_pred ccCcccc--cCchhHHHHHHHHHHHHHHHHHhhhhccCCCCccc----ChhHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 041450 742 TFNLKEI--HEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVE----RPGVMLVGAFLVAQLLATIIAVYAK--WEFAR 813 (949)
Q Consensus 742 ~~g~~~~--~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 813 (949)
+|.... ..+....+|+.|..+++++.++.++.|+.+..... ..|++++.+++++..+..++ +|.+ -..++
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i-~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILI-VYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHH-HHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHH-hcchhhHhhhc
Confidence 221110 11245689999999999999999999995532221 24557777777766655555 3433 22356
Q ss_pred cCchhHHHHHHHHHHHHHHHHHhHHHHHH
Q 041450 814 IEGIGWGWAGAIWIFSIITYLPLDPLKFV 842 (949)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 842 (949)
+.+.++..|+.+++++++.++..|+.|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 66778888888899999999999999974
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.01 E-value=7.9e-10 Score=92.84 Aligned_cols=60 Identities=37% Similarity=0.638 Sum_probs=53.8
Q ss_pred HcCCCC-CCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 041450 27 QLKCTP-KGLTTAEGEKRLQIFGYNKLEEKK-ESKLLKFLGFMWNPLSWVMEAAAIMAIVLA 86 (949)
Q Consensus 27 ~l~~~~-~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~ail~~~l~ 86 (949)
.|+++. +|||++|+++|+++||+|.++.++ .++|..|+++|++|+.++++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 466774 599999999999999999998875 888999999999999999999999999863
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.94 E-value=6.6e-09 Score=108.23 Aligned_cols=131 Identities=15% Similarity=0.136 Sum_probs=96.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+.....+...+.+. ...++ .--..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~---g~~tG------------~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS---DRVVG------------YQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecC---CeeEC------------eeecCcc
Confidence 58999999999999975 99999999999999999999996322111111000 00000 0114578
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHh
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTS 637 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~g 637 (949)
+|..+++.+++.|..+.|+|||.||.||++.||+||++.....+.+.+-|+-. -.+++.+..++..+
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~-~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPA-VHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCc-ccCHHHHHHHHHHH
Confidence 99999999998888899999999999999999999999865555554444433 35677777777554
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=5.2e-09 Score=116.35 Aligned_cols=131 Identities=18% Similarity=0.250 Sum_probs=99.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEE-eeCh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFA-GVFP 568 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a-r~sP 568 (949)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.....+...+... ...+. +.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg----~ltg~----------v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG----KLTGN----------VLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC----EEEeE----------ecCccCCc
Confidence 48899999999999999999999999988888999999985311100000000 00000 000 0234
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 569 EHKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 569 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
+.|.+.++.+.++ | +.|.++|||.||.+|++.|++|||+ ++.+..++.||.++..+++..++.++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6899998888764 3 5799999999999999999999999 888999999999999899988887653
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.9e-08 Score=106.33 Aligned_cols=129 Identities=21% Similarity=0.274 Sum_probs=93.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe-eCh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG-VFP 568 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar-~sP 568 (949)
++++++.+.++.|++.|+++.++||.....+..+.+.+|+..-. ....... +.... ..+.+. ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~-~~~~~~~---~~~~~----------~~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAF-ANRLEVE---DGKLT----------GLVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-eeEEEEE---CCEEE----------EEecCcccCC
Confidence 58999999999999999999999999999999999999985311 1000000 00000 000111 123
Q ss_pred hhHHHHHHHHhhcC----CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHH
Q 041450 569 EHKYEIVKKLQERK----HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSA 633 (949)
Q Consensus 569 ~qK~~iV~~lq~~g----~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~ 633 (949)
..|..+++.+.++. ..|.|+||+.||.+|++.|+++++++ +.+..+++||+++.++++..+..+
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 44777777665542 35889999999999999999999986 567788899999999998877653
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.8e-08 Score=104.85 Aligned_cols=153 Identities=25% Similarity=0.298 Sum_probs=104.6
Q ss_pred EEEecCCC-CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCccc-c---CCc------------
Q 041450 483 GLLPLFDP-PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSSL-L---GQS------------ 543 (949)
Q Consensus 483 G~~~i~D~-lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~--~~~~l-~---~~~------------ 543 (949)
|.+.-.|+ +.+.+.++|++|++.|+++.+.||.....+..+.+.+|+..... +...+ . +..
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33333444 77899999999999999999999999999999999999853211 00000 0 000
Q ss_pred -----------------cccc--------cCC---chHHHHhHhcc---------eEEeeChhh--HHHHHHHHhhc---
Q 041450 544 -----------------KDES--------IAS---MPVEELIEKAD---------GFAGVFPEH--KYEIVKKLQER--- 581 (949)
Q Consensus 544 -----------------~~~~--------~~~---~~~~~~~~~~~---------v~ar~sP~q--K~~iV~~lq~~--- 581 (949)
.+.. ... +.+.+.+++.. .+..+.|.. |..-++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 0000 000 11222222111 112344443 77777777653
Q ss_pred -CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 582 -KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 582 -g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
...++++||+.||.+|++.|++|+||+++.+.+|+.||++..+++-.++..+++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 245899999999999999999999999999999999999998888888887774
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.75 E-value=3e-08 Score=104.60 Aligned_cols=144 Identities=22% Similarity=0.273 Sum_probs=99.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC-C-Cccc-cCCc-------ccc-------------
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMY-P-SSSL-LGQS-------KDE------------- 546 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~-~-~~~l-~~~~-------~~~------------- 546 (949)
++.+.+.++|++|++.|+++.+.||.....+..+++++++..... . ...+ .... ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 388899999999999999999999999999999999999863211 0 0000 0000 000
Q ss_pred --------------ccCC---chHHHHhHhcc--e-----EEeeCh--hhHHHHHHHHhhc-C---CEEEEEcCCccCHH
Q 041450 547 --------------SIAS---MPVEELIEKAD--G-----FAGVFP--EHKYEIVKKLQER-K---HICGMTGDGVNDAP 596 (949)
Q Consensus 547 --------------~~~~---~~~~~~~~~~~--v-----~ar~sP--~qK~~iV~~lq~~-g---~~V~miGDG~ND~~ 596 (949)
..+. +.+.+.+.... + +..++| ..|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0000 01112222211 1 123333 4788888887663 2 35899999999999
Q ss_pred hhhcCCceeEeccchHHHHhcccccccCCChhHHHHH
Q 041450 597 ALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSA 633 (949)
Q Consensus 597 aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~ 633 (949)
|++.|+.|+||++|.+.+++.||++...++-.++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999987776666554
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.5e-08 Score=105.77 Aligned_cols=66 Identities=23% Similarity=0.230 Sum_probs=55.1
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
.|..-++.+.+. | ..|+++|||.||.+||+.|++|+||++|.+.+|++||+|..+++-.++..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 455555555442 2 35999999999999999999999999999999999999998888888887774
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.3e-07 Score=103.15 Aligned_cols=154 Identities=21% Similarity=0.211 Sum_probs=107.6
Q ss_pred EEEecCCC-CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC---------CCccc-------------
Q 041450 483 GLLPLFDP-PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMY---------PSSSL------------- 539 (949)
Q Consensus 483 G~~~i~D~-lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~---------~~~~l------------- 539 (949)
|.+.-.|. +.+.+.++|+++++.|+++.+.||.....+..+.+++|+..... ....+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 88999999999999999999999999999999999999964110 00000
Q ss_pred --------------cC-C-------c---c----------------c---------cccCCchHHHHh---Hh-----cc
Q 041450 540 --------------LG-Q-------S---K----------------D---------ESIASMPVEELI---EK-----AD 561 (949)
Q Consensus 540 --------------~~-~-------~---~----------------~---------~~~~~~~~~~~~---~~-----~~ 561 (949)
.. . . . . .....+...+.. .+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 00 0 0 0 0 000001111111 11 11
Q ss_pred eE-------EeeCh--hhHHHHHHHHhhc-CC---EEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChh
Q 041450 562 GF-------AGVFP--EHKYEIVKKLQER-KH---ICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLS 628 (949)
Q Consensus 562 v~-------ar~sP--~qK~~iV~~lq~~-g~---~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~ 628 (949)
.+ ..+.| .+|..-++.+.++ |. .|+++||+.||.+||+.|+.||||++|.+.+++.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 11 23344 3788888887763 44 399999999999999999999999999999999999988889998
Q ss_pred HHHHHHHH
Q 041450 629 VIVSAVLT 636 (949)
Q Consensus 629 ~i~~~i~~ 636 (949)
++..++++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99888754
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.67 E-value=7.5e-08 Score=97.02 Aligned_cols=100 Identities=20% Similarity=0.274 Sum_probs=80.2
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEee--ChhhHHHH
Q 041450 497 ETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGV--FPEHKYEI 574 (949)
Q Consensus 497 ~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~--sP~qK~~i 574 (949)
.+|+.|++.|+++.++|+.+...+....+.+|+..- |... .|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------------------------------f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------------------------------HEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------------------------------EecCCCCHHHHHHH
Confidence 689999999999999999999999999999998521 1111 13333444
Q ss_pred HHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCC
Q 041450 575 VKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPG 626 (949)
Q Consensus 575 V~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~ 626 (949)
++.++-....|+++||+.||.+|++.|++++||+++.+..+..||+|...++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCC
Confidence 4444333456999999999999999999999999999999999999886544
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.3e-08 Score=87.78 Aligned_cols=65 Identities=28% Similarity=0.432 Sum_probs=53.1
Q ss_pred CCChhHHHHHHhccC------hhhhhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcC
Q 041450 372 NQDAIDASIVGMLAD------PKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGL 437 (949)
Q Consensus 372 ~~~~~~~ai~~~~~~------~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~ 437 (949)
.++|.+.|++.++.. ....+..++.++.+||+|++|||+++++ .++.+.+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 347888888877643 3456788999999999999999999998 3345677999999999999963
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.8e-07 Score=99.19 Aligned_cols=145 Identities=23% Similarity=0.303 Sum_probs=99.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCccc-cCCc--------cc-------------
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSSL-LGQS--------KD------------- 545 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~--~~~~l-~~~~--------~~------------- 545 (949)
.+.+.+.++|+++++.|+++.+.||.+...+..+.+++|+..... +...+ .... ..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 377889999999999999999999999999999999999643111 00000 0000 00
Q ss_pred -----------c----c----cCCchHHHHhHhcc---------eEEeeCh--hhHHHHHHHHhhc-C---CEEEEEcCC
Q 041450 546 -----------E----S----IASMPVEELIEKAD---------GFAGVFP--EHKYEIVKKLQER-K---HICGMTGDG 591 (949)
Q Consensus 546 -----------~----~----~~~~~~~~~~~~~~---------v~ar~sP--~qK~~iV~~lq~~-g---~~V~miGDG 591 (949)
. . .+.+...++.+... .+..+.| ..|..-++.+.++ | ..|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 0 00011112222111 1223344 3788888877653 3 469999999
Q ss_pred ccCHHhhhcCCceeEeccchHHHHhcccccccCCChhH----HHHHH
Q 041450 592 VNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSV----IVSAV 634 (949)
Q Consensus 592 ~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~----i~~~i 634 (949)
.||.+|++.|++|+||+++.+.+|+.||+|..+++-.+ +...+
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l 221 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEIL 221 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999988777777 55544
|
catalyze the same reaction as SPP. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.62 E-value=1e-07 Score=95.01 Aligned_cols=97 Identities=27% Similarity=0.403 Sum_probs=78.8
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHH
Q 041450 498 TIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKK 577 (949)
Q Consensus 498 ~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~ 577 (949)
+|++|++.|+++.++||+....+..+.+++|+... |... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 99999999999999999999999999999998521 1111 234444444
Q ss_pred Hhh----cCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCC
Q 041450 578 LQE----RKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPG 626 (949)
Q Consensus 578 lq~----~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~ 626 (949)
+.+ ....|.|+||+.||.+|++.|++++++.++.+..+..||+++..+.
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCC
Confidence 433 3456999999999999999999999999888889999999997664
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.6e-07 Score=98.32 Aligned_cols=119 Identities=19% Similarity=0.197 Sum_probs=86.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe-eC
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG-VF 567 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar-~s 567 (949)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+.....+......+ .++ -.+... +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG----~lt----------G~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG----KLT----------GRVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC----EEe----------ceeeeeecC
Confidence 679999999999999999999999999999999999999997532211111100 000 012333 34
Q ss_pred hhhHHHHHHHHhhc-CC---EEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccc
Q 041450 568 PEHKYEIVKKLQER-KH---ICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVL 622 (949)
Q Consensus 568 P~qK~~iV~~lq~~-g~---~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl 622 (949)
.+.|...++.+.+. |. .+.++|||.||.|||+.|+.+|++...... +..|+...
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l-~~~a~~~~ 199 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKL-RALADVRI 199 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHH-HHHHHHhc
Confidence 47899988776653 54 489999999999999999999999844332 23444443
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.4e-07 Score=103.35 Aligned_cols=145 Identities=14% Similarity=0.172 Sum_probs=98.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCcccc---CCcc-ccccC--------------
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSSLL---GQSK-DESIA-------------- 549 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~--~~~~l~---~~~~-~~~~~-------------- 549 (949)
.+.+.+.++|++|++.|+++.+.||.....+..+.+++|+..... +...+. +... ...++
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 488999999999999999999999999999999999999853210 000000 0000 00000
Q ss_pred -----------------------------------------------------CchHHH---HhHh-----cce------
Q 041450 550 -----------------------------------------------------SMPVEE---LIEK-----ADG------ 562 (949)
Q Consensus 550 -----------------------------------------------------~~~~~~---~~~~-----~~v------ 562 (949)
.+.+.+ .+.+ ..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 000011 0100 000
Q ss_pred EEeeChh--hHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccc--cccCCChhHHHHHH
Q 041450 563 FAGVFPE--HKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDI--VLTEPGLSVIVSAV 634 (949)
Q Consensus 563 ~ar~sP~--qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDi--vl~~~~l~~i~~~i 634 (949)
+..++|. .|..-++.+.+. | ..|+++|||.||.+||+.|+.||||++|.+.+|++||+ +..+++-+++..+|
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence 1223343 477666666553 2 35999999999999999999999999999999999996 66677777887776
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.1e-07 Score=101.53 Aligned_cols=66 Identities=20% Similarity=0.230 Sum_probs=53.5
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhccc--ccccCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASD--IVLTEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaD--ivl~~~~l~~i~~~i~ 635 (949)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.||||++|.+.+|+.|| .|+.+++-+++..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 355555555442 2 3499999999999999999999999999999999988 6777788888887774
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.48 E-value=6.5e-07 Score=95.98 Aligned_cols=146 Identities=22% Similarity=0.263 Sum_probs=99.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC-CCcccc---------------------------
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL--------------------------- 540 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~-~~~~l~--------------------------- 540 (949)
..+.+.+.++|++++++|+++.+.||.....+..+..++++..... ....+.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 4477899999999999999999999999999999999999862110 000000
Q ss_pred ---------------CCccc-c-------------------------------ccCCchHHHH-------hHhc-c----
Q 041450 541 ---------------GQSKD-E-------------------------------SIASMPVEEL-------IEKA-D---- 561 (949)
Q Consensus 541 ---------------~~~~~-~-------------------------------~~~~~~~~~~-------~~~~-~---- 561 (949)
..... . ..+.+.+.++ .... .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 00000 0 0000111111 1110 1
Q ss_pred --eEEeeCh--hhHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHH
Q 041450 562 --GFAGVFP--EHKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSA 633 (949)
Q Consensus 562 --v~ar~sP--~qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~ 633 (949)
-+-.++| ..|..-++.+.+. ...+.++||+.||.+||+.|+.|+||+++++..++.||+++...+=.++.++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 1223444 4788888887752 3578999999999999999999999999999999999999987666777765
Q ss_pred H
Q 041450 634 V 634 (949)
Q Consensus 634 i 634 (949)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.4e-06 Score=90.95 Aligned_cols=127 Identities=19% Similarity=0.204 Sum_probs=90.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.+.++.|+++ +++.++|+-....+..+.+++|+...........+.. .... +.-..|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~---~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG---MITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC---eEEC------------ccccccc
Confidence 4689999999999999 9999999999999999999999853111100000000 0000 0012378
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccc-cccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDI-VLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDi-vl~~~~l~~i~~~i 634 (949)
.|...++.++..+..+.|+|||.||.+|.+.|++|+..+...+.....++. ++ +++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 899999999888899999999999999999999999887544444445665 33 4565555444
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.42 E-value=7.1e-07 Score=106.26 Aligned_cols=52 Identities=21% Similarity=0.377 Sum_probs=48.6
Q ss_pred EEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 584 ICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 584 ~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
.|+++|||.||.+||+.|+.||||++|.+.+|++||+|..+++-+++..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4899999999999999999999999999999999999998888888888774
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=7.1e-07 Score=91.65 Aligned_cols=108 Identities=24% Similarity=0.316 Sum_probs=82.7
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHH
Q 041450 497 ETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVK 576 (949)
Q Consensus 497 ~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~ 576 (949)
.+|+.|++.|+++.++||.....+..+++++|+... |. ..+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 699999999999999999999999999999998421 11 1234555555
Q ss_pred HHhh-cC---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCC----hhHHHHHHHH
Q 041450 577 KLQE-RK---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPG----LSVIVSAVLT 636 (949)
Q Consensus 577 ~lq~-~g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~----l~~i~~~i~~ 636 (949)
.+.+ .| ..|+|+||+.||.+|++.|+++++++++.+..+..||+++-.++ ...+.+.+..
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLL 170 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHH
Confidence 5433 23 46999999999999999999999999888888889999985432 3444444433
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.6e-06 Score=94.80 Aligned_cols=66 Identities=24% Similarity=0.347 Sum_probs=54.6
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
.|..-++.+.++ | ..|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-+++..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 455555554432 3 35999999999999999999999999999989999999998888888888774
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.38 E-value=1e-06 Score=91.53 Aligned_cols=117 Identities=25% Similarity=0.363 Sum_probs=84.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+... +........ ..... .+.+-...|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~~~--~g~~~----------p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVFDE--KGFIQ----------PDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEEcC--CCeEe----------cceeeEEccc
Confidence 5899999999999999999999999999999999999997431 111111000 00000 0122334567
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhccc
Q 041450 570 HKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASD 619 (949)
Q Consensus 570 qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaD 619 (949)
.|.++++.+.++ ...+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 788887776554 24599999999999999999999999765555666665
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.8e-06 Score=92.20 Aligned_cols=66 Identities=21% Similarity=0.218 Sum_probs=52.2
Q ss_pred hHHHHHHHHhhc------CCEEEEEcCCccCHHhhhcCCceeEeccch---HHHHhc---ccccccCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQER------KHICGMTGDGVNDAPALKRADIGIAVADAT---DAARSA---SDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~~------g~~V~miGDG~ND~~aLk~AdVGIamg~g~---~~a~~a---aDivl~~~~l~~i~~~i~ 635 (949)
.|..-++.+.+. ...|+++||+.||.+|++.|+.||||+++. +..++. +++|...++-+++..+++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 465555555442 456999999999999999999999999887 467775 458887888888888775
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.32 E-value=0.00036 Score=81.95 Aligned_cols=100 Identities=14% Similarity=0.183 Sum_probs=74.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
|++|++.+.++++++.|+++.++|+-....+..+++.+|+.+. +.+.+. ..++.|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~------Vigsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG------VFASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE------EEeCCC------------------ccccCCc
Confidence 4789999999999999999999999999999999999997321 111110 1135577
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAA 614 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a 614 (949)
.|.+.++..... +-+.++||..||.|+++.|+-.++++.+...+
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~ 171 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGVA 171 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHHH
Confidence 776655432222 22578999999999999999999998554433
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.4e-06 Score=92.65 Aligned_cols=64 Identities=25% Similarity=0.292 Sum_probs=54.2
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHH
Q 041450 570 HKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSA 633 (949)
Q Consensus 570 qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~ 633 (949)
.|..-++.+.+. ...++++||+.||.+|++.|+.|++|+++.+.+++.||+++.+++-.++..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 577777777654 2469999999999999999999999999999999999999988777776554
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.3e-06 Score=90.04 Aligned_cols=92 Identities=25% Similarity=0.308 Sum_probs=70.5
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh-h-
Q 041450 493 HDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE-H- 570 (949)
Q Consensus 493 ~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~-q- 570 (949)
+++.+.|+.++++|++++++||+....+..+++.+|+.........+.... +.....+.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNG---------------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTT---------------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecc---------------cceeeeeECCCCCC
Confidence 788899999999999999999999999999999999964211111110000 12245666665 4
Q ss_pred -HHHHHHHH------hhcCCEEEEEcCCccCHHhhh
Q 041450 571 -KYEIVKKL------QERKHICGMTGDGVNDAPALK 599 (949)
Q Consensus 571 -K~~iV~~l------q~~g~~V~miGDG~ND~~aLk 599 (949)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999986
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.26 E-value=7.5e-06 Score=86.36 Aligned_cols=134 Identities=13% Similarity=0.076 Sum_probs=86.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcc-ccCCccccccCCchHHHHhHhcceE--E-
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSS-LLGQSKDESIASMPVEELIEKADGF--A- 564 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~v~--a- 564 (949)
-+++||+.+.++.|++.|+++.++||.....+..+.+.++.....+.+.. +.+.......+. ...+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~---------~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH---------PCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC---------CCcccccc
Confidence 36999999999999999999999999999888888888754332221111 111110000000 0000 0
Q ss_pred eeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHH--hcccccccCCChhHHHHHH
Q 041450 565 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAAR--SASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 565 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~--~aaDivl~~~~l~~i~~~i 634 (949)
.+ ...|..+++.++.....+.|+|||.||.+|++.||++++-+.-.+-.+ ..+.+.+ ++|..+...+
T Consensus 140 ~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l 208 (214)
T TIGR03333 140 QC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKEL 208 (214)
T ss_pred CC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHH
Confidence 11 347999999998888889999999999999999999877552112111 1122222 5576666555
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.25 E-value=6.9e-06 Score=89.95 Aligned_cols=67 Identities=21% Similarity=0.143 Sum_probs=50.7
Q ss_pred hHHHHHHHHhh-------cCCEEEEEcCCccCHHhhhcCCceeEeccch-H--H---HHhcccccccCCChhHHHHHHHH
Q 041450 570 HKYEIVKKLQE-------RKHICGMTGDGVNDAPALKRADIGIAVADAT-D--A---ARSASDIVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 570 qK~~iV~~lq~-------~g~~V~miGDG~ND~~aLk~AdVGIamg~g~-~--~---a~~aaDivl~~~~l~~i~~~i~~ 636 (949)
.|..-++.+.+ ....|+++|||.||.+||+.|++||||+++. + . .+..+|++....+-.++.+++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~ 266 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDH 266 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHH
Confidence 56555555544 2346999999999999999999999998543 2 1 34478999988888888887753
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.22 E-value=3.2e-06 Score=83.75 Aligned_cols=108 Identities=20% Similarity=0.233 Sum_probs=76.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc-cCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL-LGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
+-||++|.++.|++.|.+|+++||--...+..+|.++||+........+ .+.. ....+-...+ .-+...
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~--Gk~~gfd~~~--------ptsdsg 158 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKD--GKYLGFDTNE--------PTSDSG 158 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccC--CcccccccCC--------ccccCC
Confidence 6789999999999999999999999999999999999997521111111 0000 0000000000 001124
Q ss_pred hHHHHHHHHhhc--CCEEEEEcCCccCHHhhhcCCceeEec
Q 041450 570 HKYEIVKKLQER--KHICGMTGDGVNDAPALKRADIGIAVA 608 (949)
Q Consensus 570 qK~~iV~~lq~~--g~~V~miGDG~ND~~aLk~AdVGIamg 608 (949)
-|.+++..+++. ...++|+|||+||.+|+.-||.=|+.+
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 799999999884 357899999999999999977777765
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.12 E-value=8.6e-06 Score=78.30 Aligned_cols=113 Identities=23% Similarity=0.424 Sum_probs=87.9
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHH
Q 041450 497 ETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVK 576 (949)
Q Consensus 497 ~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~ 576 (949)
-.|+.|.++||++-++||.+-.....=|+++||..- |-. -++|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~------------------------------~qG--~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL------------------------------YQG--ISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee------------------------------eec--hHhHHHHHH
Confidence 468999999999999999999999999999998421 111 256777666
Q ss_pred HHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCC----hhHHHHHHHHhHHHH
Q 041450 577 KLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPG----LSVIVSAVLTSRAIF 641 (949)
Q Consensus 577 ~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~----l~~i~~~i~~gR~~~ 641 (949)
.|.++ -..|+++||-.||.|+|++...++|+.++.+-.++.||+|+...+ ...+.++|...+..+
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~ 162 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKL 162 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcH
Confidence 66553 346999999999999999999999999999999999999986554 334445554444433
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.11 E-value=2e-05 Score=86.47 Aligned_cols=66 Identities=26% Similarity=0.310 Sum_probs=51.7
Q ss_pred hHHHHHHHHhh----cC-CEEEEEcCCccCHHhhhcCCceeEeccchHHHH----hcc-cccc--cCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQE----RK-HICGMTGDGVNDAPALKRADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~----~g-~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~----~aa-Divl--~~~~l~~i~~~i~ 635 (949)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|++|.+..+ .+| +.+. ..++-.++..+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56655655543 24 789999999999999999999999999998888 666 6776 4556667777663
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.1e-05 Score=83.44 Aligned_cols=131 Identities=21% Similarity=0.284 Sum_probs=83.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC-CCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +.+......... ....+... .... ..+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~--g~~~g~~~------~~~~--~~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS--GEYAGFDE------NEPT--SRS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC--CcEECccC------CCcc--cCC
Confidence 378999999999999999999999999999999999999963 221110000000 00000000 0000 112
Q ss_pred hhHHHHHHHHhhc--CCEEEEEcCCccCHHhhhc--CCceeEeccc--hHHHHhcccccccCCChhHHHH
Q 041450 569 EHKYEIVKKLQER--KHICGMTGDGVNDAPALKR--ADIGIAVADA--TDAARSASDIVLTEPGLSVIVS 632 (949)
Q Consensus 569 ~qK~~iV~~lq~~--g~~V~miGDG~ND~~aLk~--AdVGIamg~g--~~~a~~aaDivl~~~~l~~i~~ 632 (949)
..|.+.++.+.++ ...+.|+||+.||..|.+. ++++++.+.. .+.....+|+++. ++..+..
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 4477777777654 2468999999999999877 5666665532 2333456898873 5555544
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.5e-05 Score=81.86 Aligned_cols=113 Identities=17% Similarity=0.092 Sum_probs=75.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchH-HHHhHhcceEEe-e
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPV-EELIEKADGFAG-V 566 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~v~ar-~ 566 (949)
-++++++.+.++.|++.|+++.++|+........+.+..|+..... ..+ +..... ++... .-...++..|.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~i~-~~~~~~--~~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFI--EIY-SNPASF--DNDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhee--EEe-ccCceE--CCCCcEEEecCCCCccCcCC
Confidence 3689999999999999999999999999999999999998853210 111 110000 00000 000000011111 1
Q ss_pred ChhhHHHHHHHHhhc-CCEEEEEcCCccCHHhhhcCCceeE
Q 041450 567 FPEHKYEIVKKLQER-KHICGMTGDGVNDAPALKRADIGIA 606 (949)
Q Consensus 567 sP~qK~~iV~~lq~~-g~~V~miGDG~ND~~aLk~AdVGIa 606 (949)
....|.++++.++++ ...+.++|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123599999999887 8899999999999999999987544
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.5e-05 Score=80.98 Aligned_cols=100 Identities=22% Similarity=0.233 Sum_probs=70.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhh
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEH 570 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 570 (949)
++|++.+.++.+++.|+++.++||.....+..+++.+|+..-..+...... +....+.. ..-....+..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~---~g~~~g~~--------~~~~~~~~~~ 142 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDD---NGLLTGPI--------EGQVNPEGEC 142 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECC---CCEEeCcc--------CCcccCCcch
Confidence 689999999999999999999999999999999999998531111000000 00000000 0001244688
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCccCHHhhhcC
Q 041450 571 KYEIVKKLQER----KHICGMTGDGVNDAPALKRA 601 (949)
Q Consensus 571 K~~iV~~lq~~----g~~V~miGDG~ND~~aLk~A 601 (949)
|...++.++++ ...+.++|||.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99999887654 34689999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.94 E-value=4.9e-05 Score=80.44 Aligned_cols=107 Identities=16% Similarity=0.105 Sum_probs=73.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC-C-CccccCCccccccCCchHHHHhHhcce--E-E
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMY-P-SSSLLGQSKDESIASMPVEELIEKADG--F-A 564 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~-~-~~~l~~~~~~~~~~~~~~~~~~~~~~v--~-a 564 (949)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +..... . ...+.+......... ... + .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~---------p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPH---------PCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccC---------Cccccccc
Confidence 58999999999999999999999999999999988887 643111 0 001111100000000 000 0 0
Q ss_pred eeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEe
Q 041450 565 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAV 607 (949)
Q Consensus 565 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam 607 (949)
++ ...|..+++.++.....|.|+|||.||.+|.+.||+.++-
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 00 1348889998887777899999999999999999997773
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.86 E-value=4e-05 Score=79.87 Aligned_cols=109 Identities=17% Similarity=0.104 Sum_probs=77.1
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeC
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVF 567 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~s 567 (949)
..++++++.+.|+.+++.|+++.++||-....+..+++.+|+..- ......... +....+.. . --.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~--~g~~~g~~--------~-~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESE--DGIYTGNI--------D-GNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcC--CCEEeCCc--------c-CCCCC
Confidence 346899999999999999999999999999999999999998532 111111000 00000000 0 01234
Q ss_pred hhhHHHHHHHHhh-cCC---EEEEEcCCccCHHhhhcCCceeEec
Q 041450 568 PEHKYEIVKKLQE-RKH---ICGMTGDGVNDAPALKRADIGIAVA 608 (949)
Q Consensus 568 P~qK~~iV~~lq~-~g~---~V~miGDG~ND~~aLk~AdVGIamg 608 (949)
++.|.+.++.+.+ .+. .+.++||+.||.||++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 6788888877654 332 6889999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00012 Score=77.42 Aligned_cols=125 Identities=18% Similarity=0.162 Sum_probs=87.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeC-
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVF- 567 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~s- 567 (949)
.++.||+.+.++.|++.|+++.++||........+.++.|+.... ...+.+.. +.+..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~-------------------~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDS-------------------LPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCC-------------------CCCCCc
Confidence 458899999999999999999999999999999999999985321 11111000 11122
Q ss_pred -hhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc-eeEecc----chHHHHhcccccccCCChhHHHHHHHH
Q 041450 568 -PEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADI-GIAVAD----ATDAARSASDIVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 568 -P~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~----g~~~a~~aaDivl~~~~l~~i~~~i~~ 636 (949)
|+--..+.+.++.....+.++||+.||+.|.+.|++ +|++.. ..+.....+|+++ +++..+...+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 222234455555556679999999999999999999 666642 2334445688877 778888776654
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.72 E-value=8.1e-05 Score=71.22 Aligned_cols=118 Identities=15% Similarity=0.078 Sum_probs=76.8
Q ss_pred ecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe
Q 041450 486 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG 565 (949)
Q Consensus 486 ~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 565 (949)
.-..++++++.+.+++|++.|++++++||.....+....+++|+.... ...+...... ................+++
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF--DPVITSNGAA-IYYPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh--hheeccchhh-hhcccccccccccccccCC
Confidence 344589999999999999999999999999999999999999873210 0111000000 0000000000111112345
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhc-CCceeE
Q 041450 566 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKR-ADIGIA 606 (949)
Q Consensus 566 ~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~-AdVGIa 606 (949)
-.|+.+..+.+.+......+.++||+.||+.|.+. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 55666777777776666789999999999999998 444554
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00034 Score=74.14 Aligned_cols=126 Identities=18% Similarity=0.185 Sum_probs=89.6
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeC
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVF 567 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~s 567 (949)
..++-|+++++++.|+++|++..++|++....+..+.+..|+..... .+.|.... -...-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~---~i~g~~~~----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD---VIVGGDDV----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc---eEEcCCCC----------------CCCCcC
Confidence 45688999999999999999999999999999999999999964321 11110000 011123
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCC---ceeEecc--chHHHHhcccccccCCChhHHHHHH
Q 041450 568 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKRAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 568 P~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~Ad---VGIamg~--g~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
|+....+.+.+....+.++||||..||+.|=|+|+ ||+..|. ........+|+++ +++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 55556666666555447999999999999999999 5555553 3456666789888 5566665544
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00035 Score=74.28 Aligned_cols=43 Identities=16% Similarity=0.173 Sum_probs=38.7
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMG 530 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 530 (949)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4555667999999999999999999999999999999999984
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0003 Score=76.05 Aligned_cols=148 Identities=16% Similarity=0.156 Sum_probs=95.5
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCC--C--CCccc-cCC-c-ccc--------------
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNM--Y--PSSSL-LGQ-S-KDE-------------- 546 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~--~--~~~~l-~~~-~-~~~-------------- 546 (949)
..+..|...++++++++.|+.++..||......+.+.+++++.... . +...+ .+. . .+.
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3456789999999999999999999999999999999989875431 0 00000 000 0 000
Q ss_pred ---------c-----------------cCCch----H---HHHhHhc--ce---EE-----eeCh--hhHHHHHHHHhhc
Q 041450 547 ---------S-----------------IASMP----V---EELIEKA--DG---FA-----GVFP--EHKYEIVKKLQER 581 (949)
Q Consensus 547 ---------~-----------------~~~~~----~---~~~~~~~--~v---~a-----r~sP--~qK~~iV~~lq~~ 581 (949)
. ...+. + .+.+... .+ ++ .+.| ..|..-++.+.++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0 00001 1 1111110 11 11 3444 4788888887663
Q ss_pred ----CCEEEEEcCCccCHHhhhc-CCceeEeccchHHHHhccc-------ccccCCChhHHHHHHH
Q 041450 582 ----KHICGMTGDGVNDAPALKR-ADIGIAVADATDAARSASD-------IVLTEPGLSVIVSAVL 635 (949)
Q Consensus 582 ----g~~V~miGDG~ND~~aLk~-AdVGIamg~g~~~a~~aaD-------ivl~~~~l~~i~~~i~ 635 (949)
...|+++||+.||.+|++. ++.||+|+++.+..++.+| ++.....-+++.+++.
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3569999999999999998 6799999999888876543 5444445566666664
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00044 Score=72.23 Aligned_cols=124 Identities=17% Similarity=0.128 Sum_probs=82.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+|+.+++++|++.|+++.++||.....+...-+..|+..... ..+.... ....+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~--~i~~~~~-----------------~~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFD--HVIGSDE-----------------VPRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhee--eEEecCc-----------------CCCCCCChH
Confidence 688999999999999999999999999888888888888853110 0110000 001111232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCcee-Ee--c--cchHHHHhcccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGI-AV--A--DATDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGI-am--g--~g~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
-=..+++.++-....++|+||+.+|+.+-++|++.. ++ | +..+.....+|+++ +++..+..++
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 223444444444567999999999999999999963 33 3 23344566789887 4555555443
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00019 Score=76.88 Aligned_cols=68 Identities=18% Similarity=0.193 Sum_probs=56.6
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhccc----ccccCCChhHHHHHHHH
Q 041450 569 EHKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASD----IVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 569 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaD----ivl~~~~l~~i~~~i~~ 636 (949)
..|...++.+.++ | ..|+++||+.||.+|++.|+.||+|+++.+..++.|| ++...++-.++.++|.+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 3788888887664 3 2588999999999999999999999999999999999 77767777778877743
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0017 Score=68.72 Aligned_cols=38 Identities=21% Similarity=0.239 Sum_probs=35.6
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 041450 493 HDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMG 530 (949)
Q Consensus 493 ~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 530 (949)
+.+.++|++|++.|+++.++||.....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999985
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0012 Score=72.32 Aligned_cols=125 Identities=15% Similarity=0.137 Sum_probs=80.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
.++.|++.++++.|++.|+++.++||-....+..+..+.|+.... . ..+.+.... ...-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-~-~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-R-WIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-e-EEEecCCCC-----------------CCCCCc
Confidence 468899999999999999999999999988888888888874311 0 011000000 000111
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc-eeEecc----chHHHHhcccccccCCChhHHHHHH
Q 041450 569 EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADI-GIAVAD----ATDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 569 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~----g~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
+-=..+.+.+.-....+.|+||+.||+.|.++|++ .+++.. ..+.....+|+++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 11122333333234579999999999999999998 355532 2333445788887 4666666544
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0015 Score=68.79 Aligned_cols=124 Identities=17% Similarity=0.127 Sum_probs=81.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.+.++.|++.|+++.++||.....+..+-+..|+.... ...+...... ...-.|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE-----------------HAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC-----------------CCCCCcH
Confidence 37799999999999999999999999999999999999985321 0111000000 0111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEe--cc-c-hHHHHhcccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAV--AD-A-TDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iam--g~-g-~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
--.++.+.+.-....++|+||..+|..|-++|++- |++ +. . .+.....+|+++ +++..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 22344444444456789999999999999999984 333 31 1 223344688876 5677666544
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0017 Score=70.81 Aligned_cols=138 Identities=12% Similarity=0.120 Sum_probs=83.6
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCChHHHHHHHHHhCCC--C-C---CC--CCc----ccc----------------
Q 041450 490 PPRHDSAETIRRALD-LGVNVKMITGDQLAIGKETGRRLGMG--T-N---MY--PSS----SLL---------------- 540 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~-aGI~v~mlTGD~~~tA~~ia~~~Gi~--~-~---~~--~~~----~l~---------------- 540 (949)
.+-+++.++|++|++ .|+.++++||..........+.+++. . + .. ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 355789999999998 79999999999999998888766642 0 0 00 000 000
Q ss_pred ---CCcccc----------ccCC--chHHHH----hHhcc--------eEEeeChh--hHHHHHHHHhhc----CCEEEE
Q 041450 541 ---GQSKDE----------SIAS--MPVEEL----IEKAD--------GFAGVFPE--HKYEIVKKLQER----KHICGM 587 (949)
Q Consensus 541 ---~~~~~~----------~~~~--~~~~~~----~~~~~--------v~ar~sP~--qK~~iV~~lq~~----g~~V~m 587 (949)
|...+. ..+. +.+.++ .+... .+-.+.|. +|..-|+.+.+. ...+.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000000 0000 001111 11111 12334443 788777776553 356899
Q ss_pred EcCCccCHHhhhcC----CceeEeccchHHHHhcccccccCCChhHHHHH
Q 041450 588 TGDGVNDAPALKRA----DIGIAVADATDAARSASDIVLTEPGLSVIVSA 633 (949)
Q Consensus 588 iGDG~ND~~aLk~A----dVGIamg~g~~~a~~aaDivl~~~~l~~i~~~ 633 (949)
+||+.||.+|++.+ +.||+||++. ..|++.|. +...+...
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~ 239 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSW 239 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHH
Confidence 99999999999999 9999999765 35677774 44444433
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0016 Score=68.19 Aligned_cols=119 Identities=14% Similarity=0.136 Sum_probs=77.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh-
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP- 568 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP- 568 (949)
++.||+.+.++.|++.|+++.++|+-....+..+.++.|+.... ...+ +... ..+..|
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~-~~~~------------------~~~~Kp~ 143 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLI-GGDS------------------LAQRKPH 143 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEE-ecCC------------------CCCCCCC
Confidence 58899999999999999999999999999999999999985321 0111 1000 011112
Q ss_pred -hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCcee-Ee--ccc--hHHHHhcccccccCCChhHHH
Q 041450 569 -EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGI-AV--ADA--TDAARSASDIVLTEPGLSVIV 631 (949)
Q Consensus 569 -~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGI-am--g~g--~~~a~~aaDivl~~~~l~~i~ 631 (949)
+-=....+.+.-....++|+||..||+.|.++|++-. ++ |.+ .......+|+++ +++..+.
T Consensus 144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~ 210 (213)
T TIGR01449 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELP 210 (213)
T ss_pred hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHH
Confidence 2112333333333456999999999999999999864 34 221 122234688877 4455443
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0036 Score=66.26 Aligned_cols=118 Identities=14% Similarity=0.158 Sum_probs=75.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
-++.||+.++++.|++.|+++.++|+........+.++.|+..... ..+.+.... ..+-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~-----------------~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD--ALASAEKLP-----------------YSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc--EEEEcccCC-----------------CCCCCH
Confidence 3578999999999999999999999999999999999999854321 111110000 011112
Q ss_pred hhHHHHHHHHhhc---CCEEEEEcCCccCHHhhhcCCceeEe-cc---chHHHHhcccccccCCChhHH
Q 041450 569 EHKYEIVKKLQER---KHICGMTGDGVNDAPALKRADIGIAV-AD---ATDAARSASDIVLTEPGLSVI 630 (949)
Q Consensus 569 ~qK~~iV~~lq~~---g~~V~miGDG~ND~~aLk~AdVGIam-g~---g~~~a~~aaDivl~~~~l~~i 630 (949)
+ -+-+.+++. ...|+|+||..||+.+-++|++.... .. ..+.-...+|+++ .++..+
T Consensus 152 ~---~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl 215 (222)
T PRK10826 152 E---VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTEL 215 (222)
T ss_pred H---HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHH
Confidence 2 222233332 34589999999999999999986443 32 2222223467766 344444
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0082 Score=65.12 Aligned_cols=132 Identities=11% Similarity=0.078 Sum_probs=83.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe---
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG--- 565 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar--- 565 (949)
-++|||+.+.++.|++.|+++.++||-....+..+.+++|+..... .+..+.....-+ .+..+
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~---~IvSN~L~f~~d-----------GvltG~~~ 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV---KVVSNFMDFDED-----------GVLKGFKG 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc---eEEeeeEEECCC-----------CeEeCCCC
Confidence 3589999999999999999999999999999999999999852211 110000000000 00111
Q ss_pred --eChhhHHHHHHH-----Hh--hcCCEEEEEcCCccCHHhhhcC-C--ceeEec--c-----chHHHHhcccccccCCC
Q 041450 566 --VFPEHKYEIVKK-----LQ--ERKHICGMTGDGVNDAPALKRA-D--IGIAVA--D-----ATDAARSASDIVLTEPG 626 (949)
Q Consensus 566 --~sP~qK~~iV~~-----lq--~~g~~V~miGDG~ND~~aLk~A-d--VGIamg--~-----g~~~a~~aaDivl~~~~ 626 (949)
+....|.+.+.. +. .....|.++|||.||++|..-. + -=+.+| + -.+.=+++=||||.+|.
T Consensus 186 P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~ 265 (277)
T TIGR01544 186 PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDE 265 (277)
T ss_pred CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCC
Confidence 011345554432 22 1235688999999999996544 1 223333 2 23445678899999887
Q ss_pred hhHHHHHH
Q 041450 627 LSVIVSAV 634 (949)
Q Consensus 627 l~~i~~~i 634 (949)
--.++..|
T Consensus 266 t~~v~~~i 273 (277)
T TIGR01544 266 TLEVANSI 273 (277)
T ss_pred CchHHHHH
Confidence 66666655
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0067 Score=66.41 Aligned_cols=121 Identities=13% Similarity=0.081 Sum_probs=79.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.+.++.|++.|+++.++|+.....+...-+.+|+..... .++.+.. +. ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~~~~------------------~~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQAGTP------------------IL--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEecCC------------------CC--CCHH
Confidence 478999999999999999999999999999999999999853211 0111100 00 0111
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccc--h--HHHHhcccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADA--T--DAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g--~--~~a~~aaDivl~~~~l~~i~~~i 634 (949)
-=..+++.+.-....++|+||+.+|+.|-++|++- |++..| + +.....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 11122222322345699999999999999999985 333322 2 22334689887 5666666544
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0081 Score=72.11 Aligned_cols=48 Identities=13% Similarity=0.091 Sum_probs=39.4
Q ss_pred EEEecCCC-CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 041450 483 GLLPLFDP-PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMG 530 (949)
Q Consensus 483 G~~~i~D~-lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 530 (949)
|.+.-.|. .-+.+.++|++|+++|+.+++.||.....+..+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44443333 4457899999999999999999999999999999999974
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0065 Score=63.91 Aligned_cols=106 Identities=12% Similarity=0.027 Sum_probs=74.5
Q ss_pred CCCcchHHHH-HHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcce-EEeeC
Q 041450 490 PPRHDSAETI-RRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADG-FAGVF 567 (949)
Q Consensus 490 ~lr~~~~~~I-~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v-~ar~s 567 (949)
++.|++.+.| +.+++.|+++.++|+-....+..+++.+|+.. ...+.+...+.... ..+ -..|.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~----~~~~i~t~l~~~~t----------g~~~g~~c~ 160 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP----RVNLIASQMQRRYG----------GWVLTLRCL 160 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc----cCceEEEEEEEEEc----------cEECCccCC
Confidence 4689999999 57888999999999999999999999999621 00111111110000 000 12356
Q ss_pred hhhHHHHHHHH-hhcCCEEEEEcCCccCHHhhhcCCceeEecc
Q 041450 568 PEHKYEIVKKL-QERKHICGMTGDGVNDAPALKRADIGIAVAD 609 (949)
Q Consensus 568 P~qK~~iV~~l-q~~g~~V~miGDG~ND~~aLk~AdVGIamg~ 609 (949)
-++|..-++.. .......-+=||..||.|||+.|+-++++..
T Consensus 161 g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 161 GHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred ChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 78898877754 3334456688999999999999999999974
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0081 Score=63.38 Aligned_cols=124 Identities=16% Similarity=0.152 Sum_probs=78.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC-CCCCCccccCCccccccCCchHHHHhHhcceEEeeC
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVF 567 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~s 567 (949)
.++.+|+.+.++.|++.|+++.++|+-....+..+-+..|+.. +..+ ..+...... ..+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~-~i~~~~~~~-----------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD-AVVCPSDVA-----------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC-EEEcCCcCC-----------------CCCCC
Confidence 4799999999999999999999999999999999999999851 1111 111111000 00111
Q ss_pred hhhHHHHHHHHhhc-CCEEEEEcCCccCHHhhhcCCcee--Eeccc---h-HHHHhcccccccCCChhHHHH
Q 041450 568 PEHKYEIVKKLQER-KHICGMTGDGVNDAPALKRADIGI--AVADA---T-DAARSASDIVLTEPGLSVIVS 632 (949)
Q Consensus 568 P~qK~~iV~~lq~~-g~~V~miGDG~ND~~aLk~AdVGI--amg~g---~-~~a~~aaDivl~~~~l~~i~~ 632 (949)
|+-=....+.+.-. ...++|+||+.+|+.|-++|++.. ++..| . ......+|.++ +++..+..
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 22112223333222 256999999999999999999986 34222 1 22233577766 45555543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.014 Score=63.42 Aligned_cols=43 Identities=7% Similarity=-0.043 Sum_probs=38.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGT 531 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~ 531 (949)
+..-+.+.++|++|++.||.+++.||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999854
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0087 Score=64.73 Aligned_cols=100 Identities=14% Similarity=0.076 Sum_probs=66.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.+.++.|++.|+++.++||.....+..+-++.|+..... ..++.+.... ..+-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 467899999999999999999999999999998888888754211 1111111000 0111122
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCccCHHhhhcCCce-eEe
Q 041450 570 HKYEIVKKLQER-KHICGMTGDGVNDAPALKRADIG-IAV 607 (949)
Q Consensus 570 qK~~iV~~lq~~-g~~V~miGDG~ND~~aLk~AdVG-Iam 607 (949)
-=....+.+.-. ...++||||..+|+.|=+.|++- |++
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEE
Confidence 222333333321 34599999999999999999984 444
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0057 Score=64.25 Aligned_cols=107 Identities=12% Similarity=0.022 Sum_probs=73.8
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 490 PPRHDSAETIR-RALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 490 ~lr~~~~~~I~-~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
.++|++.++|+ .+++.|++++++|+=....+..+|+..|+... ..+.+...+. .++ ... .=..|.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~----~~~i~t~le~-~~g-------g~~-~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR----LNLIASQIER-GNG-------GWV-LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc----CcEEEEEeEE-eCC-------ceE-cCccCCC
Confidence 47899999996 78889999999999999999999998655221 0111111110 000 000 0123567
Q ss_pred hhHHHHHHHHh-hcCCEEEEEcCCccCHHhhhcCCceeEecc
Q 041450 569 EHKYEIVKKLQ-ERKHICGMTGDGVNDAPALKRADIGIAVAD 609 (949)
Q Consensus 569 ~qK~~iV~~lq-~~g~~V~miGDG~ND~~aLk~AdVGIamg~ 609 (949)
++|..-++..- ......-+=||..||.|||+.||-.+++..
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 88988776543 223455689999999999999999999973
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0066 Score=64.66 Aligned_cols=123 Identities=13% Similarity=0.100 Sum_probs=79.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+.... ...+.+... ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTL-----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcC-----------------CCCCCCHH
Confidence 47899999999999999999999999988888888888874321 011111000 01111232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccc----h-HHHHhcccccccCCChhHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADA----T-DAARSASDIVLTEPGLSVIVSA 633 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g----~-~~a~~aaDivl~~~~l~~i~~~ 633 (949)
-=..+.+.+.-....++|+||+.||..|-+.|++. |++..| . ......+|+++ +++..+...
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~ 223 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNP 223 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHH
Confidence 22344555554456799999999999999999986 444321 1 12234688888 455555443
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0024 Score=73.93 Aligned_cols=55 Identities=24% Similarity=0.258 Sum_probs=43.8
Q ss_pred EeeChh--hHHHHHHHHhhc----C---CEEEEEcCCccCHHhhhcCC-ceeEeccchHHHHhcc
Q 041450 564 AGVFPE--HKYEIVKKLQER----K---HICGMTGDGVNDAPALKRAD-IGIAVADATDAARSAS 618 (949)
Q Consensus 564 ar~sP~--qK~~iV~~lq~~----g---~~V~miGDG~ND~~aLk~Ad-VGIamg~g~~~a~~aa 618 (949)
-.+.|. .|..-++.|.++ | ..|+++||+.||.+||+.|+ .||+|+++.+..++.+
T Consensus 167 ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a 231 (413)
T PLN02382 167 LDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWY 231 (413)
T ss_pred EEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHH
Confidence 344453 588888877654 2 37899999999999999999 6999999998888643
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0033 Score=65.24 Aligned_cols=94 Identities=17% Similarity=0.092 Sum_probs=66.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeC
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVF 567 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~s 567 (949)
.+++.+++.++++.|++.|+++.++||-....+..+-+.+|+..-. ...+... ++..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~------------------~~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWME------------------DCPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeec------------------CCCCCcC
Confidence 4557778899999999999999999999999999999999985321 1111100 0111233
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcC
Q 041450 568 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKRA 601 (949)
Q Consensus 568 P~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~A 601 (949)
|+--..+.+.+.-....|+|+||+.+|+.|-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 4444455565555566799999999999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0098 Score=61.96 Aligned_cols=39 Identities=31% Similarity=0.376 Sum_probs=35.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLG 528 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~G 528 (949)
++.+.+.++|++|++.|+++.++||.....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999888754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.017 Score=63.10 Aligned_cols=93 Identities=14% Similarity=0.041 Sum_probs=62.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..... ..++.+.. ....-|.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~-------------------~~~~KP~ 160 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDD-------------------VPAGRPY 160 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCc-------------------CCCCCCC
Confidence 467899999999999999999999999888877777777643110 11111100 0011121
Q ss_pred hHHHHHHHHhhcC----CEEEEEcCCccCHHhhhcCCc
Q 041450 570 HKYEIVKKLQERK----HICGMTGDGVNDAPALKRADI 603 (949)
Q Consensus 570 qK~~iV~~lq~~g----~~V~miGDG~ND~~aLk~AdV 603 (949)
..-+.+.+++.| ..++||||..+|+.|-+.|++
T Consensus 161 -p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 161 -PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred -hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 122333333332 469999999999999999998
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.019 Score=62.36 Aligned_cols=114 Identities=18% Similarity=0.104 Sum_probs=74.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+|+.+.++.|++.|+++.++|+.....+..+-+.+|+.... ..++.+.... ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 46899999999999999999999999999999998999985321 1111111100 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEec-cchHHHHhcccccc
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVA-DATDAARSASDIVL 622 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg-~g~~~a~~aaDivl 622 (949)
-=....+.+.-....++|+||..+|+.|-++|++- |++. .........+|+++
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi 224 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV 224 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe
Confidence 11233344443455699999999999999999994 3443 22222223577776
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.025 Score=57.87 Aligned_cols=145 Identities=21% Similarity=0.247 Sum_probs=93.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccC------Cccc-c------ccCCchHHHHh
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG------QSKD-E------SIASMPVEELI 557 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~------~~~~-~------~~~~~~~~~~~ 557 (949)
+-||+.++++.|++. ...+++|---.+-+..+|..+|++........+.- .... + ..+...-+++.
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 668999999998875 44556666677788999999998532211111100 0000 0 01111222333
Q ss_pred Hhcc-eEEeeChhhHHHHHHHHhh---------------c---CCEEEEEcCCccCHHhhhcCCc--eeEec-cchHHHH
Q 041450 558 EKAD-GFAGVFPEHKYEIVKKLQE---------------R---KHICGMTGDGVNDAPALKRADI--GIAVA-DATDAAR 615 (949)
Q Consensus 558 ~~~~-v~ar~sP~qK~~iV~~lq~---------------~---g~~V~miGDG~ND~~aLk~AdV--GIamg-~g~~~a~ 615 (949)
++.+ +|.|..|..-.+|++..+. . ....+++||.+.|+.||+.+.= |+|++ +|.+-|.
T Consensus 163 e~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYal 242 (315)
T COG4030 163 EKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYAL 242 (315)
T ss_pred HHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcccc
Confidence 3332 6888888765555544443 1 2346789999999999998864 58887 8888888
Q ss_pred hcccccccCCChhHHHHHHHH
Q 041450 616 SASDIVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 616 ~aaDivl~~~~l~~i~~~i~~ 636 (949)
.-||+.+..++.......|..
T Consensus 243 ~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 243 KEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred cccceEEeccchhhhhHHHHH
Confidence 899999999998887777643
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.013 Score=69.27 Aligned_cols=123 Identities=12% Similarity=0.094 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ...+.+.... ..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 58899999999999999999999999999999999999985321 1111111000 001122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc-eeEecc--chHHHHhcccccccCCChhHHHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADI-GIAVAD--ATDAARSASDIVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~--g~~~a~~aaDivl~~~~l~~i~~~i~~ 636 (949)
-=....+.++ ...+.|+||..+|+.|-+.|++ .|++.. +.+.....+|+++ +++..+...+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 1112222222 3469999999999999999998 455532 2222234578887 566777666543
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.018 Score=61.43 Aligned_cols=90 Identities=24% Similarity=0.326 Sum_probs=64.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----ChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG 565 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD----~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 565 (949)
.|.+++.+.++.+++.|+++.++||. ...++..+.+..|+....+.... ++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vi------------------------l~g 169 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVI------------------------FAG 169 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEE------------------------EcC
Confidence 37788999999999999999999995 36689999998998422111111 111
Q ss_pred eCh--hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc-eeEe
Q 041450 566 VFP--EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADI-GIAV 607 (949)
Q Consensus 566 ~sP--~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIam 607 (949)
-++ .+|... +++.| .++|+||..+|..+-+.|++ +|++
T Consensus 170 d~~~K~~K~~~---l~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 170 DKPGQYTKTQW---LKKKN-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred CCCCCCCHHHH---HHhcC-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 111 345443 34444 48899999999999999998 4555
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.024 Score=57.64 Aligned_cols=100 Identities=11% Similarity=0.019 Sum_probs=58.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChH--------HHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcce
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLA--------IGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADG 562 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~--------tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v 562 (949)
+.||+.+++++|++.|+++.++|+.... .....-+..|+..-.. .....+... -
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL-CPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE-CcCCCCCCC-----------------C
Confidence 6799999999999999999999987531 1222233445421100 000000000 0
Q ss_pred EEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEec
Q 041450 563 FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVA 608 (949)
Q Consensus 563 ~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg 608 (949)
..+-.|+-=..+.+.+.-.-+.+.|+||..+|+.+=++|++- |++.
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~ 137 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVR 137 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 111122222344444443445699999999999999999985 4443
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.051 Score=68.00 Aligned_cols=170 Identities=19% Similarity=0.208 Sum_probs=98.1
Q ss_pred HHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEe--cCCCCCcchHHHHHHHHh-CCCeEEEEcCCChHHHHH
Q 041450 446 HQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLP--LFDPPRHDSAETIRRALD-LGVNVKMITGDQLAIGKE 522 (949)
Q Consensus 446 ~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~--i~D~lr~~~~~~I~~l~~-aGI~v~mlTGD~~~tA~~ 522 (949)
+.....|...-.|.+++-+.. +++.... -...+.+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 344555655566777776643 3332110 012366899999999999 699999999999988887
Q ss_pred HHHHhCCCC---C---CC-CCccc---c----------------------CCcccc---c------cCCchH--------
Q 041450 523 TGRRLGMGT---N---MY-PSSSL---L----------------------GQSKDE---S------IASMPV-------- 553 (949)
Q Consensus 523 ia~~~Gi~~---~---~~-~~~~l---~----------------------~~~~~~---~------~~~~~~-------- 553 (949)
.....++.- + .. +.... . |..... . ..+.++
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 665555310 0 00 00000 0 000000 0 000111
Q ss_pred HHHhHh----c--c-----eEEeeCh--hhHHHHHHHHhhc--CCEEEEEcCCccCHHhhhcC---CceeEeccchHHHH
Q 041450 554 EELIEK----A--D-----GFAGVFP--EHKYEIVKKLQER--KHICGMTGDGVNDAPALKRA---DIGIAVADATDAAR 615 (949)
Q Consensus 554 ~~~~~~----~--~-----v~ar~sP--~qK~~iV~~lq~~--g~~V~miGDG~ND~~aLk~A---dVGIamg~g~~~a~ 615 (949)
.+.+.. . . -+-.+.| -+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 0 0 1123444 4788888888764 34799999999999999997 578888874 4
Q ss_pred hcccccccCCChhHHHHHH
Q 041450 616 SASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 616 ~aaDivl~~~~l~~i~~~i 634 (949)
.+|++.|.++ ..+...+
T Consensus 704 s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 704 SRARYRLPSQ--REVRELL 720 (726)
T ss_pred CcceEeCCCH--HHHHHHH
Confidence 5788888654 3444443
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.037 Score=59.68 Aligned_cols=117 Identities=13% Similarity=0.126 Sum_probs=77.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.++++.|++.|+++.++|+-....+...-+++|+.... ...+.+.... ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 47889999999999999999999999999999999999985321 1111111100 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccc---hHHHHhcccccccCC
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADA---TDAARSASDIVLTEP 625 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g---~~~a~~aaDivl~~~ 625 (949)
-=....+.+.-....+.|+||..+|+.|=++|++- |++..| .+.....+|+++.+.
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 22334444444456699999999999999999985 334322 222234678887543
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.022 Score=63.24 Aligned_cols=110 Identities=15% Similarity=0.111 Sum_probs=76.1
Q ss_pred cCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEee
Q 041450 487 LFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGV 566 (949)
Q Consensus 487 i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~ 566 (949)
..+++.+++.+++++|++.|+++.++||.....+..+.+.+|+...... .+.+.. .....+... .--+-
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~--------~~~~~~~~~-~~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRP--------PDMHFQREQ-GDKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCc--------chhhhcccC-CCCCC
Confidence 5788999999999999999999999999999999999999988531111 111111 000000000 01133
Q ss_pred ChhhHHHHHHHHhh-cCCEEEEEcCCccCHHhhhcCCce-eEe
Q 041450 567 FPEHKYEIVKKLQE-RKHICGMTGDGVNDAPALKRADIG-IAV 607 (949)
Q Consensus 567 sP~qK~~iV~~lq~-~g~~V~miGDG~ND~~aLk~AdVG-Iam 607 (949)
.|+-|....+.+-. .-..++|+||..||+.+-+.|++- |++
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v 295 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQV 295 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence 46667777766533 336899999999999999999986 444
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.015 Score=62.09 Aligned_cols=91 Identities=20% Similarity=0.216 Sum_probs=62.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCC----ChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEee
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGV 566 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD----~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~ 566 (949)
+.+++.+.++.+++.|+++.++|+- ...++..+.+.+|+.... ..+.+.... ..-
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f---~~i~~~d~~------------------~~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN---PVIFAGDKP------------------GQY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe---eEEECCCCC------------------CCC
Confidence 5556999999999999999999997 667999999999995311 111111100 000
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEe
Q 041450 567 FPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAV 607 (949)
Q Consensus 567 sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iam 607 (949)
.| +|. ..+++.| .+.|+||..||..+-+.|++- |++
T Consensus 174 Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 174 QY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 12 232 2345445 478999999999999999884 555
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.034 Score=58.65 Aligned_cols=112 Identities=13% Similarity=0.125 Sum_probs=70.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh-
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP- 568 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP- 568 (949)
++.||+.+.++.|++.|+++.++|+.....+...-+..|+... ...+.+.. ..+.-|
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~---~~i~~~~~-------------------~~~~KP~ 140 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP---EVFVTAER-------------------VKRGKPE 140 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc---cEEEEHHH-------------------hcCCCCC
Confidence 4789999999999999999999999887766665566666311 11111000 011122
Q ss_pred -hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccch-HHHHhccccccc
Q 041450 569 -EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADAT-DAARSASDIVLT 623 (949)
Q Consensus 569 -~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~-~~a~~aaDivl~ 623 (949)
+-=....+.+.-....++|+||..+|+.+-+.|++- |++..+. ......+|+++.
T Consensus 141 p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 141 PDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred cHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 222223333333356799999999999999999984 6665332 222335777663
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.018 Score=57.25 Aligned_cols=111 Identities=14% Similarity=0.056 Sum_probs=68.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
.++|+-++.++.+++.++.++++|+--.-....+-.+++=....+....+.. +...+..-.-.++.. .....-.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn---~~~ih~dg~h~i~~~---~ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSN---NDYIHIDGQHSIKYT---DDSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeec---CceEcCCCceeeecC---CccccCC
Confidence 3789999999999999999999998766555555555441111111111100 000000000000000 0122336
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeE
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIA 606 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa 606 (949)
+|...|+.+++....+.|+|||+.|..|-+.+|+=.|
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 8999999999999999999999999988776665544
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.043 Score=56.80 Aligned_cols=94 Identities=14% Similarity=0.168 Sum_probs=63.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.+++++|++.|+++.++|+-+......+.+++|+.... ...+.... .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhh-------------------cCCCCCC
Confidence 47899999999999999999999998888888888889974221 01111000 0111222
Q ss_pred hH--HHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce
Q 041450 570 HK--YEIVKKLQERKHICGMTGDGVNDAPALKRADIG 604 (949)
Q Consensus 570 qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 604 (949)
-. ..+.+.+.-....++++||+.+|+.+-++|++-
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 11 223333333345689999999999999998875
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.092 Score=53.66 Aligned_cols=126 Identities=20% Similarity=0.119 Sum_probs=68.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChH---------------HHHHHHHHhCCCCCCCCCccccCCccccccCCchHHH
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLA---------------IGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEE 555 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~---------------tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~ 555 (949)
+.||+.+++++|++.|+++.++|..... ....+-++.|+.-. ..+...... .+.
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~~----~~~--- 98 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHHP----EDG--- 98 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCCC----CCC---
Confidence 6799999999999999999999987621 11112233444100 000000000 000
Q ss_pred HhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccch--H-HHHhcc--cccccCCChhH
Q 041450 556 LIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADAT--D-AARSAS--DIVLTEPGLSV 629 (949)
Q Consensus 556 ~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~--~-~a~~aa--Divl~~~~l~~ 629 (949)
....+-.|+--....+.+.-....++|+||..+|+.+-++|++. |++..|. . .....+ |+++ +++..
T Consensus 99 -----~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~e 171 (181)
T PRK08942 99 -----CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLAD 171 (181)
T ss_pred -----CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHH
Confidence 00111123323344444444456799999999999999999984 3333322 1 112234 7766 45666
Q ss_pred HHHHH
Q 041450 630 IVSAV 634 (949)
Q Consensus 630 i~~~i 634 (949)
+...+
T Consensus 172 l~~~l 176 (181)
T PRK08942 172 LPQAL 176 (181)
T ss_pred HHHHH
Confidence 65544
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.045 Score=60.40 Aligned_cols=115 Identities=17% Similarity=0.109 Sum_probs=68.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC-ccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS-SSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
++.||+.+.++.|++.|+++.++|+-.......+-+..+... .... ..+.+... ...+-.|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v~~~~~-----------------~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVFAGDDV-----------------PKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEEecccc-----------------CCCCCCH
Confidence 478999999999999999999999988777666555443211 0000 01100000 0011112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeE-eccch--HHHHhcccccc
Q 041450 569 EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIA-VADAT--DAARSASDIVL 622 (949)
Q Consensus 569 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa-mg~g~--~~a~~aaDivl 622 (949)
+-=..+.+.+.-....++||||+.+|+.|-++|++... +..|. .-....+|+++
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi 262 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF 262 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE
Confidence 22233444444344569999999999999999998643 32321 11113577776
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.056 Score=52.05 Aligned_cols=91 Identities=16% Similarity=0.159 Sum_probs=61.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC--------hHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcc
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKAD 561 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~--------~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 561 (949)
++.+++.++++.|+++|+++.++|+.. ........+++|+..... ...+ .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~--~----------------- 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVL---YACP--H----------------- 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEE---EECC--C-----------------
Confidence 578999999999999999999999988 677778888888742100 0000 0
Q ss_pred eEEeeChhhHHHHHHHHh-hcCCEEEEEcC-CccCHHhhhcCCc
Q 041450 562 GFAGVFPEHKYEIVKKLQ-ERKHICGMTGD-GVNDAPALKRADI 603 (949)
Q Consensus 562 v~ar~sP~qK~~iV~~lq-~~g~~V~miGD-G~ND~~aLk~AdV 603 (949)
+.+-.|+-=..+.+.++ -....++|+|| -.+|+.+-+.|++
T Consensus 83 -~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 -CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred -CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 00111222123444442 34467999999 5899999998886
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.018 Score=62.12 Aligned_cols=59 Identities=25% Similarity=0.349 Sum_probs=49.6
Q ss_pred EeeCh--hhHHHHHHHHhhcCCEEEEEcC----CccCHHhhhcC-CceeEeccchHHHHhcccccc
Q 041450 564 AGVFP--EHKYEIVKKLQERKHICGMTGD----GVNDAPALKRA-DIGIAVADATDAARSASDIVL 622 (949)
Q Consensus 564 ar~sP--~qK~~iV~~lq~~g~~V~miGD----G~ND~~aLk~A-dVGIamg~g~~~a~~aaDivl 622 (949)
..+.| -+|..-++.|.++...|+++|| |-||.+||+.| -.|++++++++..+..+.+++
T Consensus 180 leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 180 FDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 34455 4799999999887788999999 99999999987 688999999999998776654
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.056 Score=58.30 Aligned_cols=68 Identities=22% Similarity=0.240 Sum_probs=44.9
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHH-----HHhcc---c-ccccCCChhHHHHHHH
Q 041450 569 EHKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDA-----ARSAS---D-IVLTEPGLSVIVSAVL 635 (949)
Q Consensus 569 ~qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~-----a~~aa---D-ivl~~~~l~~i~~~i~ 635 (949)
..|..-|+.++++ ...|.++||..||.+||..++-||.++++.+. ..... . +.-..+.-.+|++++.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4799999988875 23577799999999999999999999987766 22111 2 2334455556666664
Q ss_pred H
Q 041450 636 T 636 (949)
Q Consensus 636 ~ 636 (949)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 3
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.018 Score=57.48 Aligned_cols=97 Identities=18% Similarity=0.140 Sum_probs=66.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
.++.+|+.+.++.|++.|++++++|+-.........+++|+... ....+...... ...-.|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~-----------------~~Kp~~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVG-----------------SRKPDP 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSS-----------------SSTTSH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhh-----------------hhhhHH
Confidence 35889999999999999999999999999999999999998521 11111111000 000111
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce
Q 041450 569 EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG 604 (949)
Q Consensus 569 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 604 (949)
+-=..+.+.+.-....++++||..+|+.+-++|++-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 222334444444456799999999999999988874
|
... |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.035 Score=56.63 Aligned_cols=92 Identities=10% Similarity=0.032 Sum_probs=57.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.++++.|+++|+++.++|+... +...-+.+|+.... ...+.+.. ..+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~-------------------~~~~kp~ 143 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAE-------------------IKKGKPD 143 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhh-------------------cCCCCCC
Confidence 5789999999999999999999997532 35566777774221 01111100 0111221
Q ss_pred --hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce
Q 041450 570 --HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG 604 (949)
Q Consensus 570 --qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 604 (949)
-=....+.+.-....++||||..+|+.+-++|++-
T Consensus 144 p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 144 PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 11222333322234589999999999999999884
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.12 Score=51.70 Aligned_cols=103 Identities=13% Similarity=0.171 Sum_probs=65.8
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHH---HHHHHh---C--CCCCCCCCccccCCccccccCCchHHHHhHh
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSSLLGQSKDESIASMPVEELIEK 559 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~---~ia~~~---G--i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 559 (949)
+|.+.++++++++++++.|+++..+||.....+. ....++ | +.. ...+. .. +..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~-~~------g~~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLL-SP------DRLFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEE-cC------Ccchhh-hhc
Confidence 4778999999999999999999999999988774 444442 2 321 00110 00 000000 000
Q ss_pred cceEEeeCh-hhHHHHHHHHhh-----cCCEEEEEcCCccCHHhhhcCCce
Q 041450 560 ADGFAGVFP-EHKYEIVKKLQE-----RKHICGMTGDGVNDAPALKRADIG 604 (949)
Q Consensus 560 ~~v~ar~sP-~qK~~iV~~lq~-----~g~~V~miGDG~ND~~aLk~AdVG 604 (949)
.+. .-.| +.|.+.++.+++ ....++..||+.+|+.+-++++|-
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 111 2224 348888887776 356788899999999998877664
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.082 Score=60.18 Aligned_cols=118 Identities=16% Similarity=0.144 Sum_probs=78.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh-
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP- 568 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP- 568 (949)
++.+|+.+.++.|++.|+++.++|+-....+..+-+..||.... ..++.+.. +.+-.|
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sdd-------------------v~~~KP~ 274 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAED-------------------VYRGKPD 274 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCc-------------------CCCCCCC
Confidence 37799999999999999999999999999999999999985321 11111110 011112
Q ss_pred -hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccchHHH-HhcccccccCCChhHH
Q 041450 569 -EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADATDAA-RSASDIVLTEPGLSVI 630 (949)
Q Consensus 569 -~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~~~a-~~aaDivl~~~~l~~i 630 (949)
+-=....+.+.-....++|+||..+|+.|-+.|++- |++..+.+.. ...+|+++ +++..+
T Consensus 275 Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 275 PEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 222334444444567799999999999999999995 4444332222 23578776 445444
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.056 Score=56.90 Aligned_cols=98 Identities=18% Similarity=0.198 Sum_probs=65.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.++++.|++.|+++.++|+-....+...-+.+|+.... ...+.+.. ..+..|.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEecc-------------------CCCCCCC
Confidence 47899999999999999999999998888788888888874321 01111100 1112232
Q ss_pred hH--HHHHHHHhhcCCEEEEEcCCc-cCHHhhhcCCc-eeEec
Q 041450 570 HK--YEIVKKLQERKHICGMTGDGV-NDAPALKRADI-GIAVA 608 (949)
Q Consensus 570 qK--~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdV-GIamg 608 (949)
.. ..+.+.+.-....++|+||.. +|+.+-++|++ .|.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 21 222333332345699999998 99999999998 45554
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.11 Score=52.69 Aligned_cols=94 Identities=16% Similarity=0.154 Sum_probs=60.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... ...+.+... ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988777 5555557874211 111111000 01111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADI 603 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV 603 (949)
-=..+.+.+.-....+.|+||...|+.+-++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 2233444444345679999999999999888887
|
HAD subfamilies caused by an overly broad single model. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.074 Score=56.46 Aligned_cols=99 Identities=11% Similarity=0.021 Sum_probs=64.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh-
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP- 568 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP- 568 (949)
++.||+.+.++.|++.|+++.++|+-....+...-+..|+.... ...+.+.. +.+-.|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeee-------------------CCCCCCC
Confidence 57899999999999999999999998888888777777774311 11111000 011112
Q ss_pred -hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce--eEecc
Q 041450 569 -EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG--IAVAD 609 (949)
Q Consensus 569 -~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG--Iamg~ 609 (949)
+-=....+.+.-....++|+||..+|+.+-+.|++. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 111122233332345699999999999999999996 45543
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.077 Score=55.89 Aligned_cols=96 Identities=11% Similarity=0.085 Sum_probs=64.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.+.+++|++. +++.++|+-....+..+-+++|+.... ..++.... .....|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~-------------------~~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSED-------------------AGIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCc-------------------cCCCCCC
Confidence 5789999999999999 999999998888888888888885321 01110000 0001132
Q ss_pred hH--HHHHHHH-hhcCCEEEEEcCCc-cCHHhhhcCCc-eeEe
Q 041450 570 HK--YEIVKKL-QERKHICGMTGDGV-NDAPALKRADI-GIAV 607 (949)
Q Consensus 570 qK--~~iV~~l-q~~g~~V~miGDG~-ND~~aLk~AdV-GIam 607 (949)
.. ....+.+ .-....++||||.. +|+.+=+++++ +|.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~ 197 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWM 197 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEE
Confidence 21 2333333 22335699999998 89999999997 3444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.063 Score=54.72 Aligned_cols=92 Identities=12% Similarity=0.102 Sum_probs=59.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.++++.|++.|+++.++|+- ..+..+-+.+|+..-. ...+.+.. ..+..|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~-------------------~~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE-------------------VKEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh-------------------CCCCCCC
Confidence 58999999999999999999999986 5566677778874211 01110000 0111222
Q ss_pred hH--HHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce
Q 041450 570 HK--YEIVKKLQERKHICGMTGDGVNDAPALKRADIG 604 (949)
Q Consensus 570 qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 604 (949)
.. ....+.+.-....+.|+||..+|+.+-++|++.
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 11 122222322335688999999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=94.30 E-value=24 Score=45.86 Aligned_cols=201 Identities=13% Similarity=0.111 Sum_probs=101.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----Ce-EEE----EeCCeEEEEeccccCCCcEEEEcCCCeec
Q 041450 96 PDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLA-----PK-TKV----LRDEKWSEQEAEILVPGDIISIKLGDIVP 165 (949)
Q Consensus 96 ~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~-----~~-~~V----~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IP 165 (949)
...+++++.++++...++.+++..++..+...+... .+ ..+ +.-|....+...|.+|.|.+.++ |+..=
T Consensus 133 ~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~-g~~l~ 211 (941)
T TIGR01517 133 AILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFIS-GLSLE 211 (941)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEE-cCcEE
Confidence 334555666677777788777776665443433221 11 222 23588899999999999999996 43444
Q ss_pred cceeEEecCCeEEEecCCCCCCceeecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhccCCCChHHHHHHHH
Q 041450 166 ADARLLEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 245 (949)
Q Consensus 166 aD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i 245 (949)
+|=-.|.|++.-|+-. .|+.+- -..|..+..|+...--...|.=+.-|.=... +...-..+.-...+.+..+.+
T Consensus 212 VdES~LTGES~pv~K~--~~~~n~--v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~--~~~~~~~t~l~~~~~~~~~~~ 285 (941)
T TIGR01517 212 IDESSITGESDPIKKG--APKDSF--LLSGTVVNEGSGRMLVTAVGVNSFGGKLMME--LRAEGEDTPLQEKLSELAGLI 285 (941)
T ss_pred EEecccCCCCCccccc--CCCCce--EEeCCeEEeeEEEEEEEEeCCCcHHHHHHHh--hccCCCCCcHHHHHHHHHHHH
Confidence 5555666654333322 133221 2456777777643322222222322321111 001011112122233333333
Q ss_pred HHH---HHHHHHHHHHHHHHHH------------HHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q 041450 246 GNF---CICSIAVGMFIEIIVM------------WAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 303 (949)
Q Consensus 246 ~~~---~~~~i~~~~~~~~~~~------------~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~ 303 (949)
..+ +.+++++..++.++.. ...+...+..++..+++.+..++|.++++++..+....+
T Consensus 286 ~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~ma 358 (941)
T TIGR01517 286 GKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMM 358 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHH
Confidence 332 2112222111111110 011223456677778888899999999999998876554
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.2 Score=50.79 Aligned_cols=112 Identities=14% Similarity=0.170 Sum_probs=72.0
Q ss_pred HHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCC-hHHHHHHHHHhCCC
Q 041450 452 FAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQ-LAIGKETGRRLGMG 530 (949)
Q Consensus 452 ~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~-~~tA~~ia~~~Gi~ 530 (949)
+.+.|.+.+.+-... ++. ..=...+-+++.++++.|++.|+++.++|+-+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~--~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLV--YPDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------ccc--cCCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 345788888776532 111 00123578999999999999999999999987 57777777887763
Q ss_pred CCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhH--HHHHHHHhhcCCEEEEEcCCc-cCHHhhhcCCce-eE
Q 041450 531 TNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHK--YEIVKKLQERKHICGMTGDGV-NDAPALKRADIG-IA 606 (949)
Q Consensus 531 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK--~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdVG-Ia 606 (949)
.. +...-|... ..+.+.+.-....++||||.. .|..+=+.|++- |.
T Consensus 85 ~~------------------------------~~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~ 134 (170)
T TIGR01668 85 VL------------------------------PHAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTIL 134 (170)
T ss_pred EE------------------------------cCCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEE
Confidence 10 000112111 122222222345599999998 799999999983 44
Q ss_pred ec
Q 041450 607 VA 608 (949)
Q Consensus 607 mg 608 (949)
+.
T Consensus 135 v~ 136 (170)
T TIGR01668 135 VE 136 (170)
T ss_pred Ec
Confidence 43
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.13 Score=59.29 Aligned_cols=98 Identities=19% Similarity=0.164 Sum_probs=64.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHH-HhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGR-RLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~-~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
++.||+.+.++.|++.|+++.++|+-....+...-. ..|+.... ...+.+. + +.+.-|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d------------------~-v~~~KP 151 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGD------------------E-VEKGKP 151 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehh------------------h-cCCCCC
Confidence 467999999999999999999999998877766554 56763211 0111000 0 111122
Q ss_pred --hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEec
Q 041450 569 --EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVA 608 (949)
Q Consensus 569 --~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg 608 (949)
+-=....+.+.-..+.|+|+||..+|+.+-++|++. |++.
T Consensus 152 ~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~ 194 (382)
T PLN02940 152 SPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVP 194 (382)
T ss_pred CHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence 222233344433456799999999999999999986 4444
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.15 Score=51.76 Aligned_cols=105 Identities=9% Similarity=-0.028 Sum_probs=66.4
Q ss_pred cCCCCCcchHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe
Q 041450 487 LFDPPRHDSAETIRRALDLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG 565 (949)
Q Consensus 487 i~D~lr~~~~~~I~~l~~aGI~v~mlTGD-~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 565 (949)
-+-++.||+.+.++.|++.|+++.++|+- ....+..+-..+|+..... ...+.+... ..+.+.
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd-~iv~~~ 105 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD-DRIEIY 105 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce-eeeecc
Confidence 34467899999999999999999999965 8888888888888741000 000001100 001111
Q ss_pred eChhhH--HHHHHHHhhc------CCEEEEEcCCccCHHhhhcCCceeEe
Q 041450 566 VFPEHK--YEIVKKLQER------KHICGMTGDGVNDAPALKRADIGIAV 607 (949)
Q Consensus 566 ~sP~qK--~~iV~~lq~~------g~~V~miGDG~ND~~aLk~AdVGIam 607 (949)
-.+..| ..+.+.+.+. -..++|+||...|+.+-++|++-...
T Consensus 106 ~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 106 KPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred CCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 111112 2344444432 35699999999999999999886543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.13 Score=50.61 Aligned_cols=97 Identities=18% Similarity=0.134 Sum_probs=58.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhCCCCCCCCCccccCCccccccCCchHH
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVE 554 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~---------------~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 554 (949)
++.||+.++++.|++.|+++.++|.... .....+.+.+|+.....-.. ..+....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFC-PHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEC-CCCCCCC---------
Confidence 4789999999999999999999998652 34555667777741100000 0000000
Q ss_pred HHhHhcceEEeeChhhH--HHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce
Q 041450 555 ELIEKADGFAGVFPEHK--YEIVKKLQERKHICGMTGDGVNDAPALKRADIG 604 (949)
Q Consensus 555 ~~~~~~~v~ar~sP~qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 604 (949)
... ..|+-+ ..+++.+.-..+.+.||||...|+.+-+.|++-
T Consensus 97 -------~~~-~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 -------CSC-RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred -------CCC-CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 000 012211 122233332345699999999999999988874
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=93.34 E-value=0.092 Score=51.87 Aligned_cols=90 Identities=21% Similarity=0.235 Sum_probs=55.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhh
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEH 570 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 570 (949)
..+|+.+.++.|++.|+++.++|+-....+...-+.. +... . ...+ +.. ++..+-.|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~~i~-~~~-----------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-DLIL-GSD-----------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-cEEE-ecC-----------------CCCCCcCHHH
Confidence 4579999999999999999999999888888777664 3211 1 0011 000 0001111211
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHhhhcCC
Q 041450 571 KYEIVKKLQERKHICGMTGDGVNDAPALKRAD 602 (949)
Q Consensus 571 K~~iV~~lq~~g~~V~miGDG~ND~~aLk~Ad 602 (949)
=..+.+.+.-.. .++|+||..+|+.|-+.|+
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 122223332234 7999999999998877764
|
HAD subfamilies caused by an overly broad single model. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.27 Score=51.88 Aligned_cols=121 Identities=14% Similarity=0.132 Sum_probs=72.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.++++.|+ .|+++.++|......+...-++.|+.... ..++.+.. ....-|.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~-------------------~~~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQ-------------------VGVAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECc-------------------cCCCCCC
Confidence 37899999999999 68999999998888887777778874211 00110000 0001122
Q ss_pred h--HHHHHHHHhhc-CCEEEEEcCCc-cCHHhhhcCCce-eEec-cchH-HHHhcccccccCCChhHHHHHH
Q 041450 570 H--KYEIVKKLQER-KHICGMTGDGV-NDAPALKRADIG-IAVA-DATD-AARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 q--K~~iV~~lq~~-g~~V~miGDG~-ND~~aLk~AdVG-Iamg-~g~~-~a~~aaDivl~~~~l~~i~~~i 634 (949)
. =..+++.+.-. ...++||||.. +|+.+=+.|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 153 p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 153 VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 1 12233333221 24699999998 799999999985 4544 2211 1112467766 4565555543
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.31 Score=51.84 Aligned_cols=102 Identities=20% Similarity=0.259 Sum_probs=67.1
Q ss_pred CCCcchHHHHHHH--HhCCCeEEEEcCCChHHHHHHHHHhCCCCCC---CCC-ccccCCccccccCCchHHHHhHhcceE
Q 041450 490 PPRHDSAETIRRA--LDLGVNVKMITGDQLAIGKETGRRLGMGTNM---YPS-SSLLGQSKDESIASMPVEELIEKADGF 563 (949)
Q Consensus 490 ~lr~~~~~~I~~l--~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~---~~~-~~l~~~~~~~~~~~~~~~~~~~~~~v~ 563 (949)
|+.|+.++.++.+ ++.|+.+.++|.-|..--..+=+.-|+.... +.+ ..+.... .+.-.+. ....|
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G---~l~v~py-----h~h~C 142 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADG---RLRVRPY-----HSHGC 142 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCc---eEEEeCc-----cCCCC
Confidence 5778999999999 5689999999998888878888888875321 111 1111100 0000000 01235
Q ss_pred EeeCh-hhHHHHHHHHhhc----C---CEEEEEcCCccCH-Hhhh
Q 041450 564 AGVFP-EHKYEIVKKLQER----K---HICGMTGDGVNDA-PALK 599 (949)
Q Consensus 564 ar~sP-~qK~~iV~~lq~~----g---~~V~miGDG~ND~-~aLk 599 (949)
.++.| -=|..+++.+++. | ..|.++|||.||- |+++
T Consensus 143 ~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 143 SLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred CcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 56665 3799999988875 4 6899999999996 5543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.28 Score=51.78 Aligned_cols=114 Identities=15% Similarity=0.145 Sum_probs=63.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHH-HHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKE-TGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~-ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
++.||+.+.|+.|++.|+++.++||-....... .-+..|+.. .. ...+.+.+.+ +.+.-|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~f-~~i~~~~~~~-----------------~~~~KP 138 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-LM-HHVVTGDDPE-----------------VKQGKP 138 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-hC-CEEEECChhh-----------------ccCCCC
Confidence 478999999999999999999999977543322 222223321 00 0011110000 001111
Q ss_pred --hhHHHHHHHHh---hcCCEEEEEcCCccCHHhhhcCCce-eEeccc--hHHHHhcccccc
Q 041450 569 --EHKYEIVKKLQ---ERKHICGMTGDGVNDAPALKRADIG-IAVADA--TDAARSASDIVL 622 (949)
Q Consensus 569 --~qK~~iV~~lq---~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g--~~~a~~aaDivl 622 (949)
+-=...++.+. -....+.||||...|+.|-++|++- |++..+ +......+|+++
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi 200 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVL 200 (220)
T ss_pred CcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHh
Confidence 11123334442 2235699999999999999999995 444322 211122466665
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.66 Score=45.94 Aligned_cols=108 Identities=15% Similarity=0.165 Sum_probs=76.4
Q ss_pred HHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC
Q 041450 449 IDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLG 528 (949)
Q Consensus 449 i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~G 528 (949)
.+.+..+|+|.+.+-..+ +++..= ....-|++.+=+++++.+|+++.++|.-++.-+...++.+|
T Consensus 20 ~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred HHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 567788999998885433 333221 22356788888999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCccccccCCchHHHHhHhcceEEe-eChhhHHHHHHHHhhc---CCEEEEEcCCc-cCHHhhhcCCc
Q 041450 529 MGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG-VFPEHKYEIVKKLQER---KHICGMTGDGV-NDAPALKRADI 603 (949)
Q Consensus 529 i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar-~sP~qK~~iV~~lq~~---g~~V~miGDG~-ND~~aLk~AdV 603 (949)
+.- ..+ .-|-- ..+-+++++. -..|+||||-. .|+-+=+.|++
T Consensus 85 v~f-------------------------------i~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 85 VPF-------------------------------IYRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred Cce-------------------------------eecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 842 111 11222 2345555554 46799999986 68877666665
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.34 Score=49.30 Aligned_cols=26 Identities=12% Similarity=0.244 Sum_probs=23.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQ 516 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~ 516 (949)
+.|++.+++++|+++|+++.++|.-.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999999999999999999765
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=92.78 E-value=0.24 Score=51.35 Aligned_cols=94 Identities=14% Similarity=0.073 Sum_probs=56.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++-||+.++++.|++.|+++.++|+-... ....-+.+|+.... ..++..... .+..-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~-----------------~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEV-----------------GAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeeccc-----------------CCCCCCHH
Confidence 57799999999999999999999975543 45666777773211 001100000 00011111
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCc-cCHHhhhcCCc
Q 041450 570 HKYEIVKKLQERKHICGMTGDGV-NDAPALKRADI 603 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdV 603 (949)
==..+.+.+.-....++||||.. +|+.+=++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 11122233322346799999997 89998888775
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=92.70 E-value=0.52 Score=51.21 Aligned_cols=86 Identities=15% Similarity=0.089 Sum_probs=57.5
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHH---HHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEE
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFA 564 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t---A~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 564 (949)
..++-|++.+.++.|++.|+++.++|+..... +...-++.|+..... . .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~--d-----------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE--E-----------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc--c-----------------------eEEe
Confidence 45578999999999999999999999976433 334455677753110 0 1222
Q ss_pred eeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhh
Q 041450 565 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAPAL 598 (949)
Q Consensus 565 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aL 598 (949)
|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 2222345555556655566799999999998654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.36 E-value=0.32 Score=55.03 Aligned_cols=96 Identities=11% Similarity=0.058 Sum_probs=57.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------ChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchH
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPV 553 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD---------------~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~ 553 (949)
-++.|++.++++.|++.|+++.++|+- ....+..+.+..|+.- ...+.+.... .
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f----d~i~i~~~~~----s--- 97 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF----DEVLICPHFP----E--- 97 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce----eeEEEeCCcC----c---
Confidence 357899999999999999999999982 1233445556666531 0000000000 0
Q ss_pred HHHhHhcceEEeeChhhHHHHHHHHhh----cCCEEEEEcCCccCHHhhhcCCce
Q 041450 554 EELIEKADGFAGVFPEHKYEIVKKLQE----RKHICGMTGDGVNDAPALKRADIG 604 (949)
Q Consensus 554 ~~~~~~~~v~ar~sP~qK~~iV~~lq~----~g~~V~miGDG~ND~~aLk~AdVG 604 (949)
.+..+| .|+ .+++..+.+ ....+.||||+.+|..+-+.|++-
T Consensus 98 ------d~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 98 ------DNCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred ------ccCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 000011 222 223333222 236799999999999999998885
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.10 E-value=0.25 Score=49.55 Aligned_cols=99 Identities=13% Similarity=0.105 Sum_probs=57.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC---------------hHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHH
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVE 554 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~---------------~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 554 (949)
++-||+.+++++|++.|+++.++|.-. ......+-+.+|+.-+ ..+.+.... .+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd----~ii~~~~~~----~~--- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD----DVLICPHFP----DD--- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee----EEEECCCCC----CC---
Confidence 366899999999999999999999742 3345556666676310 000000000 00
Q ss_pred HHhHhcceEEeeChhhHHHHHHHH-hh---cCCEEEEEcCCccCHHhhhcCCce-eEec
Q 041450 555 ELIEKADGFAGVFPEHKYEIVKKL-QE---RKHICGMTGDGVNDAPALKRADIG-IAVA 608 (949)
Q Consensus 555 ~~~~~~~v~ar~sP~qK~~iV~~l-q~---~g~~V~miGDG~ND~~aLk~AdVG-Iamg 608 (949)
+ +...-|. ..++..+ ++ ....+.||||+.+|+.+-++|++- |.+.
T Consensus 98 ------~-~~~~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~ 147 (161)
T TIGR01261 98 ------N-CDCRKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYD 147 (161)
T ss_pred ------C-CCCCCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEC
Confidence 0 0001122 2222222 22 234599999999999999999985 4443
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=91.86 E-value=0.22 Score=49.16 Aligned_cols=94 Identities=16% Similarity=0.004 Sum_probs=63.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
-++|||+.+.++.|+ .++++.+.|.=....+..+-+.+|+.... ...++.+.. +.+.-|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~-f~~i~~~~d-------------------~~~~KP 102 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF-GYRRLFRDE-------------------CVFVKG 102 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE-eeeEEECcc-------------------ccccCC
Confidence 357999999999999 57999999999999999999988874211 111111110 111112
Q ss_pred hhHHHHHHHHhh---cCCEEEEEcCCccCHHhhhcCCceeEe
Q 041450 569 EHKYEIVKKLQE---RKHICGMTGDGVNDAPALKRADIGIAV 607 (949)
Q Consensus 569 ~qK~~iV~~lq~---~g~~V~miGDG~ND~~aLk~AdVGIam 607 (949)
. +.+.++. ....|.|+||..+|..|-++|.|-|..
T Consensus 103 ~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 103 K----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred e----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 2 3333333 356799999999999988777665543
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=91.37 E-value=0.8 Score=49.15 Aligned_cols=48 Identities=15% Similarity=0.217 Sum_probs=38.1
Q ss_pred EEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHH--HHHHHhCCC
Q 041450 483 GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGK--ETGRRLGMG 530 (949)
Q Consensus 483 G~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~--~ia~~~Gi~ 530 (949)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 556667788999999999999999999999985554433 455777774
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=91.20 E-value=0.87 Score=57.66 Aligned_cols=68 Identities=10% Similarity=0.078 Sum_probs=45.5
Q ss_pred HHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCCCcchHHHHHHH-HhCCCeEEEEcCCChHHHHHHHH
Q 041450 447 QIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRA-LDLGVNVKMITGDQLAIGKETGR 525 (949)
Q Consensus 447 ~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l-~~aGI~v~mlTGD~~~tA~~ia~ 525 (949)
..+..|.....|.+++-|.. +++-.....-.+-+++.+++++| ++.|+.|.++||....+....-.
T Consensus 586 ~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred HHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 34455555566777665543 33311111235667899999997 77899999999999998887664
Q ss_pred Hh
Q 041450 526 RL 527 (949)
Q Consensus 526 ~~ 527 (949)
.+
T Consensus 653 ~~ 654 (854)
T PLN02205 653 PC 654 (854)
T ss_pred CC
Confidence 43
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.28 Score=52.83 Aligned_cols=65 Identities=20% Similarity=0.196 Sum_probs=46.0
Q ss_pred eChhhHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcC--------CceeEeccchHHHHhcccccccCCChhHHHHH
Q 041450 566 VFPEHKYEIVKKLQER----KHICGMTGDGVNDAPALKRA--------DIGIAVADATDAARSASDIVLTEPGLSVIVSA 633 (949)
Q Consensus 566 ~sP~qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~A--------dVGIamg~g~~~a~~aaDivl~~~~l~~i~~~ 633 (949)
-.+-+|...++.+.++ ...++|+||+.||.+|++.+ ..||+|+.|. .+..|++++. +...+...
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHH
Confidence 3456788877776553 34789999999999999999 4788885443 3457888884 44455444
Q ss_pred H
Q 041450 634 V 634 (949)
Q Consensus 634 i 634 (949)
+
T Consensus 239 L 239 (244)
T TIGR00685 239 L 239 (244)
T ss_pred H
Confidence 4
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=90.40 E-value=1.3 Score=47.03 Aligned_cols=87 Identities=22% Similarity=0.258 Sum_probs=54.0
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHH---HHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEE
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKET---GRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFA 564 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~i---a~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 564 (949)
.-|.-|++.+.++.|++.|++|+++||........+ =++.|+..- ....+.+ ..+ .
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~--~~LiLR~-~~d------------------~ 176 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW--KHLILRG-LED------------------S 176 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc--CeeeecC-CCC------------------C
Confidence 347889999999999999999999999987552222 234565421 0001100 000 0
Q ss_pred eeC-hhhHHHHHHHHhhcCC-EEEEEcCCccCH
Q 041450 565 GVF-PEHKYEIVKKLQERKH-ICGMTGDGVNDA 595 (949)
Q Consensus 565 r~s-P~qK~~iV~~lq~~g~-~V~miGDG~ND~ 595 (949)
+.+ -+-|.+.=+.+.+.|+ +++.+||-.+|.
T Consensus 177 ~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 177 NKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred CchHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 000 1126666667776765 667799999886
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=90.32 E-value=0.58 Score=49.48 Aligned_cols=98 Identities=11% Similarity=0.055 Sum_probs=62.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC---CCCCCCCCccccCCccccccCCchHHHHhHhcceEE
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLG---MGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFA 564 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~G---i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 564 (949)
+-++.||+.+++++|++.|+++.++|..+......+-+..+ +... + +... ...+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------f--------------~~~f-d~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------F--------------SGYF-DTTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh------c--------------ceEE-EeCccc
Confidence 34689999999999999999999999988776666554442 2110 0 0000 000111
Q ss_pred eeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeE
Q 041450 565 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIA 606 (949)
Q Consensus 565 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa 606 (949)
.-.|+-=..+.+.+.-....++|+||...|+.|-++|++-..
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 112222233444444344669999999999999999999643
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=90.18 E-value=0.94 Score=43.48 Aligned_cols=39 Identities=5% Similarity=0.031 Sum_probs=34.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHhC
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGD-QLAIGKETGRRLG 528 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD-~~~tA~~ia~~~G 528 (949)
++.+|+.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777666665
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=89.64 E-value=0.58 Score=48.88 Aligned_cols=103 Identities=15% Similarity=0.073 Sum_probs=57.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHH--HHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEee
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAI--GKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGV 566 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t--A~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~ 566 (949)
-++.|++.+.++.|++.|+++.++|...... ........++.... ..++..... ....-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f--d~v~~s~~~-----------------~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF--DAVVESCLE-----------------GLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC--CEEEEeeec-----------------CCCCC
Confidence 3578999999999999999999999865432 22222223331110 000000000 00011
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccc
Q 041450 567 FPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADA 610 (949)
Q Consensus 567 sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g 610 (949)
.|+-=..+.+.+.-....++|+||...|+.+=++|++- |.+..+
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 12211223333333345689999999999999999984 445443
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=89.45 E-value=1.4 Score=57.34 Aligned_cols=124 Identities=15% Similarity=0.172 Sum_probs=78.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhh
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEH 570 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 570 (949)
+-||+.+.++.|+++|+++.++|+-....+...-++.|+...... ..+.... +.+.-|+.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~-------------------~~~~KP~P 221 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADA-------------------FENLKPAP 221 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECcc-------------------cccCCCCH
Confidence 678999999999999999999999988888888888888421111 1111100 11112221
Q ss_pred --HHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc-eeEeccc---hHHHHhcccccccCCChhHHHHHH
Q 041450 571 --KYEIVKKLQERKHICGMTGDGVNDAPALKRADI-GIAVADA---TDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 571 --K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~g---~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
=.+..+.+.-....++|+||..+|+.|-+.|++ -|++..+ .+.....+|+++.+..--++..++
T Consensus 222 e~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~ 291 (1057)
T PLN02919 222 DIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDIL 291 (1057)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHH
Confidence 123344444445679999999999999999998 4555422 233445677777544332344443
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=88.86 E-value=63 Score=41.86 Aligned_cols=199 Identities=14% Similarity=0.077 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCe------EEE----EeCCeEEEEeccccCCCcEEEEcCCCeeccceeEE
Q 041450 102 VVLLFINSTISFIEENNAGNAAAALMAGLAPK------TKV----LRDEKWSEQEAEILVPGDIISIKLGDIVPADARLL 171 (949)
Q Consensus 102 i~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~------~~V----~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll 171 (949)
+++..+.....-+...++-+++.++....... ..+ +.-|....+...|.+|-|.+.++..+ .=+|=-.|
T Consensus 46 i~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~-l~VdeS~L 124 (917)
T TIGR01116 46 LVANAIVGVWQERNAEKAIEALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT-LRVDQSIL 124 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc-eEEEcccc
Confidence 33333334445555555666666665433221 112 23578899999999999999997652 33444455
Q ss_pred ecCCeEEEecC--CCCCCc-ee----ecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhh-ccCCCChHHHHHH
Q 041450 172 EGDPLKIDQAA--LTGESL-PV----TKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD-STNQVGHFQKVLT 243 (949)
Q Consensus 172 ~g~~~~Vdes~--LTGEs~-pv----~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~-~~~~~~~~~~~~~ 243 (949)
.|++.-|.-.. ..++.. +. .-..|..+.+|....--...|.=+..|.=... +...-. .+.-...+.+...
T Consensus 125 TGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~--~~~~~~~~t~lq~~l~~~~~ 202 (917)
T TIGR01116 125 TGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDE--MRAAEQEDTPLQKKLDEFGE 202 (917)
T ss_pred cCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHHHHHH--hhccCCCCCCHHHHHHHHHH
Confidence 55443332221 111111 11 12467777777644332333344444421111 111112 2222233444444
Q ss_pred HHHHHHHHHHHHHHHHHHHH--------HHH-hccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q 041450 244 AIGNFCICSIAVGMFIEIIV--------MWA-IQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 303 (949)
Q Consensus 244 ~i~~~~~~~i~~~~~~~~~~--------~~~-~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~ 303 (949)
.+..+.+++.++..++.... .|. .....+..++..+++....+.|..+++++..+...-+
T Consensus 203 ~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~ 271 (917)
T TIGR01116 203 LLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMA 271 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHH
Confidence 44443222211111111110 111 0112344556667788889999999999888876544
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.51 E-value=1.9 Score=44.63 Aligned_cols=112 Identities=16% Similarity=0.208 Sum_probs=67.3
Q ss_pred CCCcchHHHHHHHHhCCC-eEEEEcCCChHHHHHHHHHhCCCC---CCCC-CccccCCccccccCCchHHHHhHhcceEE
Q 041450 490 PPRHDSAETIRRALDLGV-NVKMITGDQLAIGKETGRRLGMGT---NMYP-SSSLLGQSKDESIASMPVEELIEKADGFA 564 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI-~v~mlTGD~~~tA~~ia~~~Gi~~---~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 564 (949)
|+-|+..++|+.+++.|- .++++|--|.---..+-+..|+.+ .++. ...+...... .-.+.. ...-|.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L---~v~pyH----~~hsC~ 156 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRL---LVRPYH----TQHSCN 156 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcE---EeecCC----CCCccC
Confidence 577899999999999996 999999888776667777777632 0000 0001000000 000000 012255
Q ss_pred eeChh-hHHHHHHHHhhc------CC-EEEEEcCCccC-HHhhhcCCceeEec
Q 041450 565 GVFPE-HKYEIVKKLQER------KH-ICGMTGDGVND-APALKRADIGIAVA 608 (949)
Q Consensus 565 r~sP~-qK~~iV~~lq~~------g~-~V~miGDG~ND-~~aLk~AdVGIamg 608 (949)
++-|. =|..++..++.. .+ .+.++|||.|| +|+++...--+||-
T Consensus 157 ~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 157 LCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred cCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 54333 366676666543 22 78899999999 48887777667773
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=88.33 E-value=1.3 Score=44.69 Aligned_cols=40 Identities=10% Similarity=0.015 Sum_probs=31.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChH------------HHHHHHHHhCCC
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLA------------IGKETGRRLGMG 530 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~------------tA~~ia~~~Gi~ 530 (949)
+-||+.+++++|++.|+++.++|.-... ....+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 3489999999999999999999965431 345566777763
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.11 E-value=2.7 Score=43.47 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=32.6
Q ss_pred chHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 041450 494 DSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMG 530 (949)
Q Consensus 494 ~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 530 (949)
.+.+.+.+|+++|+.|+.+|.-....-...-+++|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999998888778888888875
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.70 E-value=0.68 Score=48.74 Aligned_cols=96 Identities=10% Similarity=0.084 Sum_probs=59.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+|+.++++.| ++++.++|+.....+...=+..|+..... ...+.+.... ..+-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~-~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP-DKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc-ceEeeHHhcC-----------------CCCCChH
Confidence 4668999999988 49999999998887777777777753210 0111110000 0001111
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeE
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIA 606 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa 606 (949)
-=....+.+.-....|+|+||..+|+.+=++|++...
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 1122223332223459999999999999999998764
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.18 E-value=1.6 Score=45.17 Aligned_cols=99 Identities=13% Similarity=0.061 Sum_probs=57.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH-HHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia-~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
++.||+.++++.|++.|+++.++|.-+.......- +..++.... ...+.... +...-|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f--d~v~~s~~-------------------~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA--DHIYLSQD-------------------LGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc--CEEEEecc-------------------cCCCCC
Confidence 47899999999999999999999987655433221 112331100 00000000 001112
Q ss_pred h--hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEecc
Q 041450 569 E--HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVAD 609 (949)
Q Consensus 569 ~--qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~ 609 (949)
+ ==..+.+.+.-....+.|+||...|+.+-++|++- |.+.+
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~ 186 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTD 186 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecC
Confidence 1 11223333433445689999999999999999885 44444
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=86.79 E-value=0.89 Score=51.86 Aligned_cols=68 Identities=25% Similarity=0.208 Sum_probs=47.3
Q ss_pred EEeeChh---hHHHHHHHHhhc-C-----C-EEEEEcCCccCHHhhhc-----CCceeEeccchHHHHhcccccccCCCh
Q 041450 563 FAGVFPE---HKYEIVKKLQER-K-----H-ICGMTGDGVNDAPALKR-----ADIGIAVADATDAARSASDIVLTEPGL 627 (949)
Q Consensus 563 ~ar~sP~---qK~~iV~~lq~~-g-----~-~V~miGDG~ND~~aLk~-----AdVGIamg~g~~~a~~aaDivl~~~~l 627 (949)
+-.+.|. +|..-|+.+.+. | . .++++||+.||..|++. +++||+|++|... ..|++.|. +-
T Consensus 291 vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~--t~A~y~L~--dp 366 (384)
T PLN02580 291 VLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKE--SNAFYSLR--DP 366 (384)
T ss_pred EEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCC--ccceEEcC--CH
Confidence 3455563 899888887654 2 1 35899999999999996 6899999876532 25778774 34
Q ss_pred hHHHHHH
Q 041450 628 SVIVSAV 634 (949)
Q Consensus 628 ~~i~~~i 634 (949)
..+...+
T Consensus 367 ~eV~~~L 373 (384)
T PLN02580 367 SEVMEFL 373 (384)
T ss_pred HHHHHHH
Confidence 4444444
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=85.97 E-value=2.7 Score=42.38 Aligned_cols=105 Identities=18% Similarity=0.190 Sum_probs=73.6
Q ss_pred HHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCC--eEEEEcCC-------ChHHHHH
Q 041450 452 FAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGV--NVKMITGD-------QLAIGKE 522 (949)
Q Consensus 452 ~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI--~v~mlTGD-------~~~tA~~ 522 (949)
+.+.|.|.+.+-... ++ ...=++.+-|+..+.+++|++.+. +|.++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 567788888875433 11 113467788999999999999987 49999975 3788999
Q ss_pred HHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhc-----CCEEEEEcCCc-cCHH
Q 041450 523 TGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQER-----KHICGMTGDGV-NDAP 596 (949)
Q Consensus 523 ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~-----g~~V~miGDG~-ND~~ 596 (949)
+.+.+|+.- + .+..--|.-..++.+.++.+ -+.++||||-. .|+-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999741 0 02223576666788888765 56799999974 4655
Q ss_pred hhhc
Q 041450 597 ALKR 600 (949)
Q Consensus 597 aLk~ 600 (949)
+=..
T Consensus 152 ~gN~ 155 (168)
T PF09419_consen 152 MGNR 155 (168)
T ss_pred Hhhc
Confidence 5443
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=85.95 E-value=13 Score=42.26 Aligned_cols=34 Identities=9% Similarity=-0.017 Sum_probs=30.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETG 524 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia 524 (949)
.+-++..++|++|. .|+.+.++||..........
T Consensus 133 ~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 133 FMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 37789999999999 78999999999999888873
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=83.47 E-value=2.7 Score=47.22 Aligned_cols=91 Identities=13% Similarity=0.080 Sum_probs=66.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH----hCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRR----LGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG 565 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~----~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 565 (949)
++.+++.++++.|++.|+++.++|.-+...|..+-++ +|+.... + +..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f---------------------------~-~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF---------------------------D-ARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe---------------------------e-EEE
Confidence 4578999999999999999999999999999888877 6653211 0 111
Q ss_pred eChhhHHHHHHHHhh----cCCEEEEEcCCccCHHhhhcCCceeEec
Q 041450 566 VFPEHKYEIVKKLQE----RKHICGMTGDGVNDAPALKRADIGIAVA 608 (949)
Q Consensus 566 ~sP~qK~~iV~~lq~----~g~~V~miGDG~ND~~aLk~AdVGIamg 608 (949)
..++-|.+.++.+-+ .-..++|+||...|+.+.+.+..++.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 223445444444332 2467999999999999999998887554
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=82.97 E-value=3 Score=46.65 Aligned_cols=47 Identities=19% Similarity=0.256 Sum_probs=39.2
Q ss_pred EEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHhCC
Q 041450 483 GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETG---RRLGM 529 (949)
Q Consensus 483 G~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia---~~~Gi 529 (949)
|.+--.+.+=|++.++|++|++.|++++++|+....+...+. +++|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 566666777799999999999999999999999977777776 45665
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=82.88 E-value=1.5 Score=44.58 Aligned_cols=92 Identities=12% Similarity=0.070 Sum_probs=60.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe---e
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG---V 566 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar---~ 566 (949)
++.+++.+++++|+ .++.++|.-....+...-++.|+.... . ..+.... .-.+ .
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-d-~i~~~~~------------------~~~~~~~~ 140 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-D-GIFCFDT------------------ANPDYLLP 140 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-C-eEEEeec------------------ccCccCCC
Confidence 37789999999997 479999998888888888999884311 0 1110000 0000 1
Q ss_pred Chhh--HHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce
Q 041450 567 FPEH--KYEIVKKLQERKHICGMTGDGVNDAPALKRADIG 604 (949)
Q Consensus 567 sP~q--K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 604 (949)
.|+. =..+++.+......++|+||...|+.+=++|++-
T Consensus 141 KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 141 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred CCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 2322 1334444444556789999999999998888774
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=82.81 E-value=2.2 Score=43.96 Aligned_cols=97 Identities=12% Similarity=0.080 Sum_probs=55.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCC--CCCccccCCccccccCCchHHHHhHhcceEEeeC
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNM--YPSSSLLGQSKDESIASMPVEELIEKADGFAGVF 567 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~s 567 (949)
++.||+.+++++|++.+ +.+++|.-+..+....-+.+|+.... +-... +.++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i-----------------------~~~~~~ 129 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEV-----------------------LMCGHD 129 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEE-----------------------EEeccC
Confidence 37899999999999875 56677764444443344555553110 00000 111111
Q ss_pred hhhHHHHHH-HHhhcC-CEEEEEcCCccCHHhhhcC--Cce-eEeccch
Q 041450 568 PEHKYEIVK-KLQERK-HICGMTGDGVNDAPALKRA--DIG-IAVADAT 611 (949)
Q Consensus 568 P~qK~~iV~-~lq~~g-~~V~miGDG~ND~~aLk~A--dVG-Iamg~g~ 611 (949)
+. |-+++. .+++.| ..++|+||..+|+.+-++| ++- |.+..|.
T Consensus 130 ~~-kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 130 ES-KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred cc-cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 11 223333 233333 4588999999999999999 985 4444443
|
2 hypothetical protein; Provisional |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=82.74 E-value=28 Score=46.03 Aligned_cols=115 Identities=7% Similarity=0.057 Sum_probs=76.5
Q ss_pred HHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHH-HHHHHcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 041450 42 KRLQIFGYNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIM-AIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAG 120 (949)
Q Consensus 42 ~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~ail-~~~l~~~~~~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~ 120 (949)
++.+..-+|.+.--..++|.+|-+ +.|.+.++..+..++ .+.... ++..+...++++++..+...++.+..++++
T Consensus 90 N~i~TsKYt~~tFlP~~L~eQF~r-~aN~YFL~I~ilq~ip~~s~~~---~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d 165 (1178)
T PLN03190 90 NSIRTAKYSVFSFLPRNLFEQFHR-VAYIYFLVIAVLNQLPQLAVFG---RGASILPLAFVLLVTAVKDAYEDWRRHRSD 165 (1178)
T ss_pred CeeeccccccHHHHHHHHHHHHHh-hhhHHHHHHHHHHhCCCcccCC---cchHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 455555666666666677777654 444444444444333 222221 234788889999999999999999999999
Q ss_pred HHHHHHhcCCC---CeEEE----EeCCeEEEEeccccCCCcEEEEcC
Q 041450 121 NAAAALMAGLA---PKTKV----LRDEKWSEQEAEILVPGDIISIKL 160 (949)
Q Consensus 121 ~~~~~l~~~~~---~~~~V----~rdg~~~~i~~~~Lv~GDiV~l~~ 160 (949)
+.........- ....+ ++-|....+...|.+|-|.+.+..
T Consensus 166 ~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~S 212 (1178)
T PLN03190 166 RIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLST 212 (1178)
T ss_pred HhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEec
Confidence 88866544321 11222 356888999999999999999973
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 949 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 0.0 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-123 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 2e-39 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 3e-39 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 2e-38 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 6e-37 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 4e-26 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 4e-26 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 4e-26 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 1e-25 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 5e-17 | ||
| 2o98_P | 52 | Structure Of The 14-3-3 H+-Atpase Plant Complex Len | 6e-17 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 2e-16 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 3e-16 | ||
| 3m50_P | 31 | Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY E | 4e-08 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 1e-07 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 2e-07 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 7e-07 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 3e-06 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 2e-04 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 2e-04 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|2O98|P Chain P, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 52 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3M50|P Chain P, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY EPIBESTAT Length = 31 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 949 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-141 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-141 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-131 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 7e-29 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 7e-29 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-27 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-25 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-20 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 6e-25 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-24 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 4e-19 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-24 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-19 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-17 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 5e-17 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 2e-14 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 8e-14 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-06 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 2e-06 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 4e-06 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 5e-06 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 6e-06 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 6e-06 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 1e-05 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 1e-05 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 1e-05 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 1e-05 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 1e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 3e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 4e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 5e-04 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 6e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 7e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 1231 bits (3186), Expect = 0.0
Identities = 728/881 (82%), Positives = 791/881 (89%)
Query: 5 SLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLKFL 64
SLE+IKNE VDLE+IP+ EVF+QLKC+ +GLTT EGE R+QIFG NKLEEKKESKLLKFL
Sbjct: 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 62
Query: 65 GFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAA 124
GFMWNPLSWVME AAIMAI LANG G+PPDW DFVGI+ LL INSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAA 122
Query: 125 ALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALT 184
ALMAGLAPKTKVLRD KWSEQEA ILVPGDI+SIKLGDI+PADARLLEGDPLK+DQ+ALT
Sbjct: 123 ALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALT 182
Query: 185 GESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 244
GESLPVTK+PG EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA
Sbjct: 183 GESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242
Query: 245 IGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 304
IGNFCICSIA+GM IEIIVM+ IQRR YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 305 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAA 364
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK+L+EVF KG + D +LL A
Sbjct: 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFA 362
Query: 365 ARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTS 424
A ASRVENQDAIDA++VGMLADPKEARAGI EVHFLPFNPVDKRTA+TYID +G+WHR S
Sbjct: 363 AMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVS 422
Query: 425 KGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGL 484
KGAPEQI++L ++ +K IID +AERGLR+L V RQ VPEKTKES G+PWEFVGL
Sbjct: 423 KGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482
Query: 485 LPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSK 544
LPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLG K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHK 542
Query: 545 DESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG 604
D ++AS+PVEELIEKADGFAGVFPEHKYEIVKKLQERKHI GMTGDGVNDAPALK+ADIG
Sbjct: 543 DANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIG 602
Query: 605 IAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 664
IAVADATDAAR ASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+L
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML 662
Query: 665 VALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMAL 724
+AL+W+FDF FM+LIIAILNDGTIMTISKDRVKPSP PDSWKLKEIF TGVVLG Y A+
Sbjct: 663 IALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722
Query: 725 VTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVER 784
+T FFW H T FF++TF ++ I + L A+YLQVSIISQALIFVTRSRSWSFVER
Sbjct: 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVER 782
Query: 785 PGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIR 844
PG +L+ AFL+AQL+AT+IAVYA WEFA+I GIGWGWAG IW++SI+TY PLD KF IR
Sbjct: 783 PGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIR 842
Query: 845 YAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMH 885
Y SGKAW NL +NKTAFT KKDYGK EREAQW H
Sbjct: 843 YILSGKAWLNLFENKTAFTMKKDYGKEEREAQWMRGSHHHH 883
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 1085 bits (2808), Expect = 0.0
Identities = 305/891 (34%), Positives = 481/891 (53%), Gaps = 45/891 (5%)
Query: 2 GDISLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLL 61
G + EE + R+ ++ + T GLT+ E +R + +G N+++E+KE+ L
Sbjct: 57 GHDAEEEEEEATPGGGRVVPEDMLQ--TDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFL 114
Query: 62 KFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGN 121
KFLGF P+ +VME AA++A L DW DF I LL +N+ + F++E AG+
Sbjct: 115 KFLGFFVGPIQFVMEGAAVLAAGL-------EDWVDFGVICGLLLLNAVVGFVQEFQAGS 167
Query: 122 AAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDP-LKIDQ 180
L LA K VLRD E EA +VPGDI+ ++ G I+PAD R++ D L++DQ
Sbjct: 168 IVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQ 227
Query: 181 AALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQ 239
+ALTGESL V K+ GD+VF+ S K+GE V+ ATG +TF G+AA LV++ GHF
Sbjct: 228 SALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFT 287
Query: 240 KVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTM 299
+VL IG + + + I + + + ++ L + I G+P+ +P V++ TM
Sbjct: 288 EVLNGIGTILLILVIFTLLIVWVSSF-YRSNPIVQILEFTLAITIIGVPVGLPAVVTTTM 346
Query: 300 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDG 359
A+G+ L+++ AI ++++AIE +AG+++LCSDKTGTLT NKLS+ V G D +
Sbjct: 347 AVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPED 403
Query: 360 LLLAAARASRVENQ--DAIDASIVGMLADPKEARAGITE---VHFLPFNPVDKRTAITYI 414
L+L A A+ + + DAID + + L A++ +++ + F PF+PV K+
Sbjct: 404 LMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVE 463
Query: 415 DSNGDWHRTSKGAPEQIIDLCG----LKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEK 470
G+ KGAP ++ + E+ + + FA RG R+LGV R
Sbjct: 464 SPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVAR------ 517
Query: 471 TKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMG 530
K EG WE +G++P DPPRHD+ +T+ A LG+++KM+TGD + I +ET R+LG+G
Sbjct: 518 -KRGEG-SWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLG 575
Query: 531 TNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGD 590
TN+Y + L + + V + +E ADGFA VFP+HKY +V+ LQ+R ++ MTGD
Sbjct: 576 TNIYNAERLGLGGGGD-MPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGD 634
Query: 591 GVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIY 650
GVNDAP+LK+AD GIAV ++DAARSA+DIV PGL I+ A+ TSR IF RM Y +Y
Sbjct: 635 GVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVY 694
Query: 651 AVSITIRIVLGFLLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKE 710
++++I + + L + +++ IAI D + I+ D S P W L +
Sbjct: 695 RIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPK 754
Query: 711 IFGTGVVLGTYMALVTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQAL 770
++G V+LG +A+ T ++ I + + L+LQ+S+ L
Sbjct: 755 LWGMSVLLGVVLAVGTWITVTTMY------AQGENGGIVQNFGNMDEVLFLQISLTENWL 808
Query: 771 IFVTRSRSWSFVERPGVMLVGAFLVAQLLATIIAVYAKWEFARIEGIGWGWAGAIWIFSI 830
IF+TR+ + P L GA + +LAT ++ + IWIFS
Sbjct: 809 IFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG---WFEHSDTSIVAVVRIWIFSF 865
Query: 831 ITYLPLDPLKFVIRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQ 881
+ + + ++++ + +DNL+ K+ +K +
Sbjct: 866 GIFCIMGGVYYILQDS---VGFDNLMHGKSPKGNQKQRSLEDFVVSLQRVS 913
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 447 bits (1152), Expect = e-141
Identities = 204/997 (20%), Positives = 371/997 (37%), Gaps = 175/997 (17%)
Query: 6 LEEIKNE-NVDLERIPVAEVFEQLKCTP-KGLTTAEGEKRLQIFGYNKLEE-KKESKLLK 62
LE +K E ++ ++ VAE+ ++ + + KGL+ + + L G N L + + +K
Sbjct: 42 LENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVK 101
Query: 63 FLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPD----FVGIVVLL--FINSTISFIEE 116
F + L +M AA + ++ D ++ + ++ + + +E
Sbjct: 102 FARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQE 161
Query: 117 NNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPL 176
+ N A+ + + V+RD + A+ LV GD++ +K GD VPAD R+L+
Sbjct: 162 FKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGR 221
Query: 177 KIDQAALTGESLPVTK-------NPGDE---VFSGSTCKQGEIEAVVIATGVHTFFGKAA 226
K+D ++LTGES P T+ +P + F + C +G + +V+ TG T G+ A
Sbjct: 222 KVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIA 281
Query: 227 HLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDN 278
L ++ HF ++ + FI + + +
Sbjct: 282 SLASGVENEKTPIAIEIEHFVDIIAGL----AILFGATFFIVAMCIG-------YTFLRA 330
Query: 279 LLV---LLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 335
++ +++ +P + ++V +++ + RL+ + + K + A+E + V+CSDKTGT
Sbjct: 331 MVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGT 390
Query: 336 LTLNKLSV-----DKSLIEVFVKGTDSDG-----------LLLAAA---RASRVENQDAI 376
LT N+++V D + S L RA+ QDA+
Sbjct: 391 LTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAV 450
Query: 377 DASIVGMLADPKEA-------RAGITE---------VHFLPFNPVDKR-TAITYIDSNGD 419
++ D E V +PFN +K +I ++ D
Sbjct: 451 PVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRD 510
Query: 420 WHRTS--KGAPEQIIDLCG----------LKGEMRRKAHQIIDNFAERGLRALGVGRQTV 467
KGAPE++++ C L + R + G R LG + +
Sbjct: 511 PRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYL 570
Query: 468 PEKTKESEGSPWE-----------FVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQ 516
EK + F GL+ + DPPR + + + G+ V M+TGD
Sbjct: 571 SEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDH 630
Query: 517 ----LAIGKETG---------RRLGMGTNMYPSSSLLGQSKDESI-----ASMPVEELIE 558
AI G + + ++ I M EL+E
Sbjct: 631 PITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVE 690
Query: 559 KADG-----FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADA-TD 612
FA P+ K IV+ Q I +TGDGVND+PALK+ADIG+A+ A +D
Sbjct: 691 ALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 750
Query: 613 AARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALLWKFD 672
AA++A+D++L + + IV+ V R IF +K Y ++ I + +L+ +
Sbjct: 751 AAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLI-YITVSVP 809
Query: 673 FP--PFMILIIAILNDGT-------------IMTISKDRVKPSPMPDSWKLKEIFGTGVV 717
P IL I + D IM + R + L +
Sbjct: 810 LPLGCITILFIELCTDIFPSVSLAYEKAESDIMH-LRPRNPKRDRLVNEPL--AAYSYFQ 866
Query: 718 LGTYMALVTAF-FFWLIHDTRFFTNTFNLKEIHEKPDMLSAA------------------ 758
+G + +F + +F + L
Sbjct: 867 IGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQY 926
Query: 759 ----LYLQVSIISQ-ALIFVTRSRSWSFVERPGVM----LVGAFLVAQLLATIIAVYAKW 809
++ + Q A + + ++R S ++ G LV A + + + Y
Sbjct: 927 TCYTVFFISIEMCQIADVLIRKTRRLSAFQQ-GFFRNRILVIAIVFQVCIGCFL-CYCPG 984
Query: 810 --EFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIR 844
I + W F ++ ++ + K +R
Sbjct: 985 MPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVR 1021
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 445 bits (1146), Expect = e-141
Identities = 207/996 (20%), Positives = 383/996 (38%), Gaps = 172/996 (17%)
Query: 5 SLEEIKNE-NVDLERIPVAEVFEQLKCTP-KGLTTAEGEKRLQIFGYNKLEE-KKESKLL 61
L+E+K E ++D ++ + E+ + +GLT A ++ L G N L + +
Sbjct: 36 DLDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWI 95
Query: 62 KFLGFMWNPLSWVMEAAAIMAIVL------ANGGGKPPDWPDFVGIVVLLFINSTISFIE 115
KF ++ S ++ AI+ + + V + ++ + S+ +
Sbjct: 96 KFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQ 155
Query: 116 ENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDP 175
E + + + + V+RD + S AE +V GD++ +K GD +PAD R++
Sbjct: 156 EAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG 215
Query: 176 LKIDQAALTGESLPVTK-------NPGDE---VFSGSTCKQGEIEAVVIATGVHTFFGKA 225
K+D ++LTGES P T+ NP + F + C +G VV+ TG T G+
Sbjct: 216 CKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRI 275
Query: 226 AHLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGID 277
A L ++ HF ++T + + V FI +++ ++
Sbjct: 276 ATLASGLEVGRTPIAIEIEHFIHIITGV----AVFLGVSFFILSLILG-------YSWLE 324
Query: 278 NLLV---LLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 334
++ +++ +P + ++V + + + R++++ + K + A+E + +CSDKTG
Sbjct: 325 AVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 384
Query: 335 TLTLNKLSV-----DKSLIEVFVKGTDSDG-----------LLLAAA---RASRVENQDA 375
TLT N+++V D + E S L AA RA QD
Sbjct: 385 TLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDN 444
Query: 376 IDASIVGMLADPKEA-------RAGITE---------VHFLPFNPVDKR-TAITYIDSNG 418
+ + D E+ + + +PFN +K +I + +
Sbjct: 445 VPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSS 504
Query: 419 DWHRTS--KGAPEQIIDLCG----------LKGEMRRKAHQIIDNFAERGLRALGVGRQT 466
+ KGAPE+I+D C LK +M+ G R LG
Sbjct: 505 ESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFA 564
Query: 467 VPEKTKESEGSPWE-----------FVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGD 515
+PE FVGL+ + DPPR + + + G+ V M+TGD
Sbjct: 565 LPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGD 624
Query: 516 Q----LAIGKETG-------RRLGMGTNMYPSSSLLGQSKDES-------IASMPVEELI 557
AI K G + + + ++ + + E L
Sbjct: 625 HPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLD 684
Query: 558 EKADG-----FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADA-T 611
+ FA P+ K IV+ Q + I +TGDGVND+PALK+ADIG+A+ + +
Sbjct: 685 DILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGS 744
Query: 612 DAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALLWKF 671
D ++ A+D++L + + IV+ V R IF +K Y ++ I + FL+ ++
Sbjct: 745 DVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLV-FIIGNV 803
Query: 672 DFP--PFMILIIAILNDGT-------------IMTISKDRVKPSPMPDSWKLKEIFGTGV 716
P IL I + D IM K + + + +
Sbjct: 804 PLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAY---G 860
Query: 717 VLGTYMALVTAFFFWLI-----------------HDTRFFTNTFNLKEIHEKPDMLSAAL 759
+G AL F +++I D R+ ++ + +
Sbjct: 861 QIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVE 920
Query: 760 ------YLQVSIISQ-ALIFVTRSRSWSFVERP--GVMLVGAFLVAQLLATIIAVYAKW- 809
+ ++ Q A + + ++R S ++ +L+ LA + Y
Sbjct: 921 FTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFL-SYCPGT 979
Query: 810 -EFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIR 844
R+ + W + +S+I +L + +F+IR
Sbjct: 980 DVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIR 1015
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 419 bits (1080), Expect = e-131
Identities = 235/1004 (23%), Positives = 392/1004 (39%), Gaps = 201/1004 (20%)
Query: 20 PVAEVFEQLKCTP-KGLTTAEGEKRLQIFGYNKL-EEKKESKLLKFLGFMWNPLSWVMEA 77
E + GLT + ++ L+ +G+N+L E+ +S + + L ++
Sbjct: 9 STEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLL 68
Query: 78 AAIMAIVLA---NGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKT 134
AA ++ VLA G + + I+++L N+ + +E NA NA AL
Sbjct: 69 AACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMG 128
Query: 135 KVLRDEKWSEQE--AEILVPGDIISIKLGDIVPADARLL--EGDPLKIDQAALTGESLPV 190
KV R ++ S Q A +VPGDI+ + +GD VPAD R+L + L++DQ+ LTGES+ V
Sbjct: 129 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 188
Query: 191 TKNP----------GDE---VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN---- 233
K+ D+ +FSG+ G+ +V TGV T GK + +T
Sbjct: 189 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKT 248
Query: 234 ----QVGHFQKVLT-AIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLV---LLIG 285
++ F + L+ I C+ + + R I + L +
Sbjct: 249 PLQQKLDEFGEQLSKVISLICVAVWLINIGHF--NDPVHGGSWIRGAIYYFKIAVALAVA 306
Query: 286 GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK 345
IP +P V++ +A+G+ R++++ AI + + ++E + V+CSDKTGTLT N++SV K
Sbjct: 307 AIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCK 366
Query: 346 ------------SLIEVFVKGT--DSDGLLLAAARASRVENQDAI-----------DASI 380
SL E + G+ +G +L + R D + D+S+
Sbjct: 367 MFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSL 426
Query: 381 V--------GMLADPKEA-------RAGITEVHF-------------------------L 400
+ + E + + L
Sbjct: 427 DFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTL 486
Query: 401 PFNPVDKRTAITYIDSNGDWHRTS-----KGAPEQIIDLCG----------LKGEMRRKA 445
F+ K ++ + KGAPE +ID C + G ++ K
Sbjct: 487 EFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKI 546
Query: 446 HQIIDNF--AERGLRALGVGRQTVPEKTKE------SEGSPWE----FVGLLPLFDPPRH 493
+I + LR L + + P K +E S +E FVG++ + DPPR
Sbjct: 547 LSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRK 606
Query: 494 DSAETIRRALDLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSSLLGQSKDESIA 549
+ +I+ D G+ V MITGD +AI + G + + G+
Sbjct: 607 EVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIG--IFGENEEVADRAYTGR----EFD 660
Query: 550 SMPVEELIEKADG---FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIA 606
+P+ E E FA V P HK +IV+ LQ I MTGDGVNDAPALK+A+IGIA
Sbjct: 661 DLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIA 720
Query: 607 VADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIY--------AVSITIRI 658
+ T A++AS++VL + S IV+AV RAI+ MK + Y V I +
Sbjct: 721 MGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTA 780
Query: 659 VLGFLLVALLWKFDFPPFMILIIAILNDGT-------------IMTISKDRVKPSPMPDS 705
LG AL+ P +L + ++ DG IM P +
Sbjct: 781 ALGLPE-ALI------PVQLLWVNLVTDGLPATALGFNPPDLDIM-----DRPPRSPKEP 828
Query: 706 WKLKEIFGTGVVLGTYMALVT--AFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQV 763
+F + +G Y+ T A +W ++ T++ +
Sbjct: 829 LISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLD 888
Query: 764 SIIS-----QALIFVT------------RSRSWSFVERP---GVMLVGAF---LVAQLLA 800
I + S + S + P + L+G+ + L
Sbjct: 889 CEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLI 948
Query: 801 TIIAVYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIR 844
+ F +++ + + S+ + LKF+ R
Sbjct: 949 LYVDPLPMI-F-KLKALDLTQWLMVLKISLPVIGLDEILKFIAR 990
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 7e-29
Identities = 51/166 (30%), Positives = 73/166 (43%), Gaps = 31/166 (18%)
Query: 480 EFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 539
E G++ L D R +S E I + +G+ M+TGD + K LG
Sbjct: 134 EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG----------- 182
Query: 540 LGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 599
++ FA V P K E VK++Q++ M GDGVNDAPAL
Sbjct: 183 -----------------LDDY--FAEVLPHEKAEKVKEVQQKYVT-AMVGDGVNDAPALA 222
Query: 600 RADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMK 645
+AD+GIA+ TD A +DIVL + + V SR + +
Sbjct: 223 QADVGIAIGAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 7e-29
Identities = 34/166 (20%), Positives = 72/166 (43%), Gaps = 30/166 (18%)
Query: 480 EFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 539
E + + D PR + + + + + G+ + +++GD+ KE + L +
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI---------- 175
Query: 540 LGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 599
E + + PE K I++KL++ + M GDGVNDA AL
Sbjct: 176 -----QEYY---------------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 600 RADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMK 645
AD+ +A+ + D +++ +DI+L + ++ + + + +
Sbjct: 216 LADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-27
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 39/170 (22%)
Query: 480 EFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYP 535
G++ + D + + ++ +G+ V MITGD AI +E
Sbjct: 153 RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN----------- 201
Query: 536 SSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDA 595
++ +I A V P K E VKKLQ K + GDG+NDA
Sbjct: 202 -----------------LDLVI------AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDA 237
Query: 596 PALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMK 645
PAL +AD+GIAV +D A + DIVL L +V+A+ SR ++K
Sbjct: 238 PALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 3e-25
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 31/160 (19%)
Query: 480 EFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 539
G++ + D + + ++ +G+ V MITGD + R L
Sbjct: 525 RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN----------- 573
Query: 540 LGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 599
++ +I A V P K E VKKLQ K + GDG+NDAPAL
Sbjct: 574 -------------LDLVI------AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALA 613
Query: 600 RADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRA 639
+AD+GIAV +D A + DIVL L +V+A+ SR
Sbjct: 614 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRK 653
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 96.0 bits (240), Expect = 2e-20
Identities = 67/282 (23%), Positives = 106/282 (37%), Gaps = 71/282 (25%)
Query: 118 NAGNAAAALMAGLAPKT-KVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPL 176
G A L+ GL KT V+RD K E + GDI+ ++ G+ +P D ++EG+
Sbjct: 197 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY 255
Query: 177 KIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFF------------GK 224
+D++ ++GE +PV K+ GDEVF + G ++ G T K
Sbjct: 256 -VDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 314
Query: 225 A--AHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLV 281
L D +V +F + T + +A+ FI W
Sbjct: 315 PPIQRLAD---KVVAYF--IPTVLL------VAISAFI----YW---------------- 343
Query: 282 LLIGGIPIAMPTVLSVT---------------MAI--GSHRLSQQGAITKRMTAIEEMAG 324
I P+ + A+ G + ++ G + K A+E
Sbjct: 344 YFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEK 403
Query: 325 MDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLL-LAAA 365
+ + DKTGTLT K V ++ D LL LAA
Sbjct: 404 VTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAAI 441
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} Length = 52 | Back alignment and structure |
|---|
Score = 97.1 bits (241), Expect = 6e-25
Identities = 41/52 (78%), Positives = 46/52 (88%)
Query: 898 NSNRELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949
+ ELN+LAE+AKRRAE+AR RELHTLKGHVESVVKLKGLDIETIQQ Y +
Sbjct: 1 TNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 1e-24
Identities = 52/167 (31%), Positives = 72/167 (43%), Gaps = 33/167 (19%)
Query: 480 EFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 539
+ V LL + DP + + ETI G+ + M+TGD + LG
Sbjct: 544 KTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG----------- 592
Query: 540 LGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 599
I+K A + PE K IV +L+++ I M GDGVNDAPAL
Sbjct: 593 -----------------IKKV--VAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALA 633
Query: 600 RADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKN 646
+ADIGIA+ TD A ++ + L L I A S + M N
Sbjct: 634 KADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSEST---MSN 677
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 91.8 bits (229), Expect = 4e-19
Identities = 69/272 (25%), Positives = 114/272 (41%), Gaps = 53/272 (19%)
Query: 120 GNAAAALMAGLAPKT--KVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLK 177
G+A AL+ L P++ ++ D E + + GD++ ++ G+ +P D + EG
Sbjct: 213 GSAIRALL-KLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF- 270
Query: 178 IDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFG------------KA 225
+D++ +TGE +PV K +V + + G + G T +A
Sbjct: 271 VDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRA 330
Query: 226 --AHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGMFIEIIVMWAI--QRRSYRDGIDNLL 280
L D V G F V I +AV FI +WA+ + + G+ +
Sbjct: 331 PIQRLAD---TVSGWF--VPAVIL------VAVLSFI----VWALLGPQPALSYGLIAAV 375
Query: 281 VLLIGGIPIAMP------TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 334
+LI IA P T +S+ + +G + +Q G + K A+E M ++ L DKTG
Sbjct: 376 SVLI----IACPCALGLATPMSIMVGVG--KGAQSGVLIKNAEALERMEKVNTLVVDKTG 429
Query: 335 TLTLNKLSVDKSLIEVFVKGTDSDGLL-LAAA 365
TLT + + D L LAAA
Sbjct: 430 TLTEGHPKL----TRIVTDDFVEDNALALAAA 457
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 1e-24
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 480 EFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 539
G++ + D + + ++ +G+ V MITGD + R L
Sbjct: 447 RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN----------- 495
Query: 540 LGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 599
++ +I A V P K E VKKLQ K + GDG+NDAPAL
Sbjct: 496 -------------LDLVI------AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALA 535
Query: 600 RADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMK 645
+AD+GIAV +D A + DIVL L +V+A+ SR ++K
Sbjct: 536 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 581
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 93.0 bits (232), Expect = 1e-19
Identities = 72/276 (26%), Positives = 112/276 (40%), Gaps = 59/276 (21%)
Query: 118 NAGNAAAALMAGLAPKT-KVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPL 176
G A L+ GL KT V+RD K E + GDI+ ++ G+ +P D ++EG+
Sbjct: 119 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES- 176
Query: 177 KIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFF------------GK 224
+D++ ++GE +PV K+ GDEVF + G ++ G T K
Sbjct: 177 YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 236
Query: 225 A--AHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLV 281
L D +V +F + T + +A+ FI W LL
Sbjct: 237 PPIQRLAD---KVVAYF--IPTVLL------VAISAFI----YWYFI------AHAPLLF 275
Query: 282 LLIGGI-------PIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 330
I P A PT ++T+ +G + ++ G + K A+E + +
Sbjct: 276 AFTTLIAVLVVACPCAFGLATPT--ALTVGMG--KGAELGILIKNADALEVAEKVTAVIF 331
Query: 331 DKTGTLTLNKLSVDKSLIEVFVKGTDSDGLL-LAAA 365
DKTGTLT K V ++ D LL LAA
Sbjct: 332 DKTGTLTKGKPEV----TDLVPLNGDERELLRLAAI 363
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 78.3 bits (194), Expect = 2e-17
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 122 AAAALMAGLAPKT-KVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQ 180
A L+ GL KT V+RD K E + GDI+ ++ G+ +P D ++EG+ +D+
Sbjct: 2 AIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDE 59
Query: 181 AALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGV 218
+ ++GE +PV K+ GDEVF + G + + AT V
Sbjct: 60 SMISGEPVPVLKSKGDEVFGATINNTGVL--KIRATRV 95
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 77.2 bits (191), Expect = 5e-17
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 118 NAGNAAAALMAGLAPKT-KVLRDEKWSEQEAEILVP------GDIISIKLGDIVPADARL 170
A A L+ L ++ + + +E V GDII + G P D R+
Sbjct: 4 TMSEALAKLI-SLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRV 62
Query: 171 LEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGV 218
+EG +D++ +TGE++PV K PG V +GS + G + ++ AT V
Sbjct: 63 IEGHS-MVDESLITGEAMPVAKKPGSTVIAGSINQNGSL--LICATHV 107
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* Length = 31 | Back alignment and structure |
|---|
Score = 66.9 bits (163), Expect = 2e-14
Identities = 26/30 (86%), Positives = 28/30 (93%)
Query: 920 RELHTLKGHVESVVKLKGLDIETIQQHYTV 949
RELHTLKGHVE+VVKLKGLDIETIQQ Y +
Sbjct: 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 8e-14
Identities = 28/160 (17%), Positives = 65/160 (40%), Gaps = 19/160 (11%)
Query: 352 VKGTDSDGLLLAAARASRVENQ--DAIDASIV--GMLADPKEARAGITEVHFLPFNPVDK 407
+ G S+ +L +A S + + +D +++ + + ++ +PF+ +
Sbjct: 10 ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERR 69
Query: 408 RTAITYIDSNGDWHRTSKGAPEQIIDLCG----------LKGEMRRKAHQIIDNFAERGL 457
R ++ ++ KGA ++I+++C L M RK ++ D +GL
Sbjct: 70 RMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGL 129
Query: 458 RALGVGRQTVPEKTKESEGSPWE----FVGLLPLFDPPRH 493
R + V + +P + + + + E G + D H
Sbjct: 130 RVVAVATKYLPAREGDYQRA-DESDLILEGYIAFLDHHHH 168
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 64.9 bits (157), Expect = 1e-10
Identities = 81/557 (14%), Positives = 167/557 (29%), Gaps = 156/557 (28%)
Query: 439 GEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKE---SE------GSPWEFVGLLPLFD 489
GE + + I+ F + + + V + K E S G L LF
Sbjct: 12 GEHQYQYKDILSVFEDAFVDNFDC--KDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69
Query: 490 PPRHDSAETIRRALD--LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDES 547
E +++ ++ L +N K + I E R+ M T MY + ++
Sbjct: 70 TLLSKQEEMVQKFVEEVLRINYKFLMS---PIKTEQ-RQPSMMTRMYIEQRDRLYNDNQV 125
Query: 548 IASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKH-----ICGMTGDGVNDAPALKRAD 602
A V + ++ + L E + I G+ G G K
Sbjct: 126 FAKYNVSR------------LQPYLKLRQALLELRPAKNVLIDGVLGSG-------K--- 163
Query: 603 IGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSI----TIRI 658
+ + V S + +M ++ I+ +++ +
Sbjct: 164 -------------------------TWVALDVCLSYKVQCKM-DFKIFWLNLKNCNSPET 197
Query: 659 VLGFLLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVK----PSPMPDS-------WK 707
VL +L LL++ D P + N + + ++ P +
Sbjct: 198 VLE-MLQKLLYQID-PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN 255
Query: 708 LKEI--FGTG--VVLGTYMALVTAFF-------FWLIHDTRFFT--NTFNL--KEIHEKP 752
K F ++L T VT F L H + T +L K + +P
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315
Query: 753 DML-SAALY---LQVSIISQALI-FVTRSRSWSFVERPGV-MLVGAFLVAQLLATIIAVY 806
L L ++SII++++ + +W V + ++ + L A ++
Sbjct: 316 QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375
Query: 807 AKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIRYAQSGKAWDNLLQNKTAFTTKK 866
+ +F ++P L + W +++++ K
Sbjct: 376 --DRLS--------------VFPPSAHIPTILLSLI---------WFDVIKSDVMVVVNK 410
Query: 867 DYGKGEREAQWAMAQRTMHGLQTSESTVNEKNSNRELNELAEQAKRRAEVARLRELHTLK 926
+ E Q + ++ + EL + ++ LH +
Sbjct: 411 LHKYSLVEKQPKESTISIPSIY------------LEL---------KVKLENEYALH--R 447
Query: 927 GHVESVVKLKGLDIETI 943
V+ K D + +
Sbjct: 448 SIVDHYNIPKTFDSDDL 464
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 5e-06
Identities = 75/561 (13%), Positives = 160/561 (28%), Gaps = 168/561 (29%)
Query: 441 MRRKAHQIIDNFAERGLRA----LGVGRQTVPEKTKESEGSPWEFVGLL-------PLFD 489
+ K +++ F E LR L + + ++ ++ +F
Sbjct: 71 LLSKQEEMVQKFVEEVLRINYKFL---MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA 127
Query: 490 P---PRHDSAETIRRAL-----DLGVNVK-MI-TGDQ-LAIG--KETGRRLGMGTNMYPS 536
R +R+AL V + ++ +G +A+ + M ++
Sbjct: 128 KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWL 187
Query: 537 SSLLGQ-SKDESIASMPVEELIEKADGFAGVFPEH-----------KYEIVKKLQERKH- 583
+ L + E++ M +++L+ + D +H + E+ + L+ + +
Sbjct: 188 N--LKNCNSPETVLEM-LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE 244
Query: 584 ICGMTGDGVNDAPALKRADIG---------IAVADATDAAR------------------- 615
C + V +A A ++ V D AA
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK 304
Query: 616 ---------SASD----IVLTEP-GLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLG 661
D ++ T P LS+I ++ A + K+ ++ I L
Sbjct: 305 SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
Query: 662 FL----LVALLWKFD-FP-----PFMILII--AILNDGTIMTISKDRVKPSPMPDSWKLK 709
L + + FP P ++L + + +M + K S + + K
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS-LVEKQP-K 422
Query: 710 EIFGTGVVLGTYMALVTAFFFWLIHD--TRFFTNTFNLKEIHEKPDMLSAALYLQVSIIS 767
E T I N +H I+
Sbjct: 423 E--------STIS----------IPSIYLELKVKLENEYALHRS-------------IVD 451
Query: 768 QALIFVTRSRSWSFVERPGVMLVGAFLV--------AQLLATIIAVYAKWEF--ARIEGI 817
I T S + + + + + V+ + F +I
Sbjct: 452 HYNIPKTFD-SDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHD 510
Query: 818 GWGWAGAIWIFSIITYLPL--------DP---------LKFVIRYAQS---GKAWDNLLQ 857
W + I + + L DP L F+ + ++ K D LL+
Sbjct: 511 STAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTD-LLR 569
Query: 858 NKTAFTTKKD--YGKGEREAQ 876
A + + + + ++ Q
Sbjct: 570 --IALMAEDEAIFEEAHKQVQ 588
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 48.2 bits (116), Expect = 2e-06
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 569 EHKYEIVKKLQERKHI----CGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTE 624
K V + ++ + G+ V+D LKR + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 625 PG 626
G
Sbjct: 142 SG 143
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 4e-06
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 569 EHKYEIVKKLQERKHI----CGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTE 624
+K L E+ I GD + D P +++ + +AVADA +D V
Sbjct: 100 SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRI 159
Query: 625 PG 626
G
Sbjct: 160 AG 161
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 5e-06
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 569 EHKYEIVKKLQERKHI----CGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTE 624
+ K +K+ E + I G+ VND P +AVA A D R A+ V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 625 PG 626
PG
Sbjct: 145 PG 146
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 6e-06
Identities = 19/62 (30%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 569 EHKYEIVKKLQERKHI----CGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTE 624
K ++L I GD +NDA LKR I A A R S I L +
Sbjct: 78 VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEK 137
Query: 625 PG 626
G
Sbjct: 138 RG 139
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 6e-06
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 569 EHKYEIVKKLQERKHI----CGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTE 624
K EI +K++E+ + G GD V D +K+ +AV +A + R + +
Sbjct: 83 YKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQR 142
Query: 625 PG 626
G
Sbjct: 143 NG 144
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 569 EHKYEIVKKLQERKHI----CGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTE 624
K + L++ + GD + D P +++ +G+AV++A +D
Sbjct: 93 VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTER 152
Query: 625 PG 626
G
Sbjct: 153 TG 154
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 569 EHKYEIVKKLQERKHI----CGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTE 624
K L ++ + GD D PA AVADA ++A D VL+
Sbjct: 82 LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLST 141
Query: 625 PG 626
G
Sbjct: 142 HG 143
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 13/62 (20%), Positives = 20/62 (32%), Gaps = 4/62 (6%)
Query: 569 EHKYEIVKKLQERKHI----CGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTE 624
K +L GD + D P + + + +AVADA + V
Sbjct: 123 SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRI 182
Query: 625 PG 626
G
Sbjct: 183 KG 184
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 569 EHKYEIVKKLQERKHI----CGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTE 624
E K ++ KL + GD + D P ++R +G+AVA+A R + +
Sbjct: 93 EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRA 152
Query: 625 PG 626
G
Sbjct: 153 QG 154
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 569 EHKYEIVKKLQERKHI----CGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTE 624
+ K + + ++ I G GD + D P +++ + + VAD ++ V
Sbjct: 99 DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHI 158
Query: 625 PG 626
G
Sbjct: 159 KG 160
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 3e-04
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 566 VFPEHKYEIVKKLQERKHI----CGMTGDGVNDAPALKRADIGIAVADATDAARSASDIV 621
+F K E++ LQ +I + GDG ND K A I IA +A + + +
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 622 LTEPGLSVI 630
+ EP L++I
Sbjct: 197 INEPDLALI 205
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 4e-04
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 566 VFPEHKYEIVKKLQERKHI----CGMTGDGVNDAPALKRADIGIAVADATDAARSASDIV 621
+ K EI++K+ + + I GDG ND K+A + IA A + +DI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 622 LTEPGLSVI 630
+ + L I
Sbjct: 198 IEKRDLREI 206
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Query: 566 VFPEHKYEIVKKLQERKHI----CGMTGDGVNDAPALKRADIGIAVADATDAARSASDIV 621
V + K +I+ L ++ + GDG ND + A +G+A A + +
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 622 LTEPGLSVI 630
+ GL +
Sbjct: 300 VRFAGLGGV 308
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 6e-04
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 571 KYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIA 606
K ++ +L E M GD V D A K +D+ A
Sbjct: 152 KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 187
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 7e-04
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
Query: 566 VFPEHKYEIVKKLQERKHI----CGMTGDGVNDAPALKRADIGIAVADATDAARSASDIV 621
+ +K + + L R +I GDG ND P L+ A GIA A R
Sbjct: 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQ 300
Query: 622 LTEPGLSVI 630
+ G ++
Sbjct: 301 INYHGFELL 309
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 949 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.95 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.95 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.94 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.93 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.93 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.86 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.76 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.35 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.2 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.13 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.1 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.08 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.07 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.05 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.02 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.01 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 98.95 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.95 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.88 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 98.83 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.8 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.76 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.75 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.73 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.65 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.65 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.63 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.62 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.59 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.59 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.57 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.54 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.53 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.52 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.49 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.48 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.48 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.4 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.37 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.35 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.33 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.33 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.32 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.2 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.2 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.18 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.16 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.15 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.14 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.06 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.04 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.04 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.03 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.03 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.99 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 97.98 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.93 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.91 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 97.87 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.87 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.86 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.86 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.85 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.83 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.82 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.81 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.81 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.79 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.78 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.77 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.77 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.74 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.73 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.72 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.71 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.68 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.66 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.63 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.61 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.61 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.57 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.57 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.57 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.55 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.52 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.48 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.47 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.46 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.45 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.44 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.43 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.4 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.4 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.37 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.37 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.35 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.35 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.35 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.34 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.33 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.32 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.3 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.17 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.16 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.13 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.11 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.06 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.97 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.79 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 96.7 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.7 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.57 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.56 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.52 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.43 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.4 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.38 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.33 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.11 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 95.9 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 95.73 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.68 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 95.59 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 95.36 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.28 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.08 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.04 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.98 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 94.97 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 94.84 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 94.71 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 94.67 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.37 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 94.33 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 93.27 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 92.97 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 92.69 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 92.63 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 91.37 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 90.86 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 90.83 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 89.93 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 87.13 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 86.25 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 85.45 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-146 Score=1354.75 Aligned_cols=877 Identities=83% Similarity=1.282 Sum_probs=746.9
Q ss_pred chhhhhccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHH
Q 041450 5 SLEEIKNENVDLERIPVAEVFEQLKCTPKGLTTAEGEKRLQIFGYNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIV 84 (949)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~ail~~~ 84 (949)
++++++++..|+|.+|.+|+++.|+++.+|||++|+++|+++||+|++++++++.|+.|+++|++|+.++|+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~ 82 (885)
T 3b8c_A 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIA 82 (885)
T ss_dssp ---------CCCSSSSTTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGG
T ss_pred chhhhhhcchhhHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58889999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCee
Q 041450 85 LANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIV 164 (949)
Q Consensus 85 l~~~~~~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~I 164 (949)
++..++.+.+|.++++|+++++++..+++++|+|+++++++|++..+++++|+|||++++|++++|+|||+|.|++||+|
T Consensus 83 l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~I 162 (885)
T 3b8c_A 83 LANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDII 162 (885)
T ss_dssp SSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCC
T ss_pred HHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEE
Confidence 86555566789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEecCCeEEEecCCCCCCceeecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhccCCCChHHHHHHH
Q 041450 165 PADARLLEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 244 (949)
Q Consensus 165 PaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~~~~~~~~~~~~~ 244 (949)
||||+|++|+.++||||+|||||.|+.|.+||.+|+||.|.+|.++++|++||.+|.+||+++++++..+++++|+.+++
T Consensus 163 PaDg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~ 242 (885)
T 3b8c_A 163 PADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242 (885)
T ss_dssp SSCCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHH
T ss_pred eeceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHH
Confidence 99999999987899999999999999999999999999999999999999999999999999999877788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhhhcC
Q 041450 245 IGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 324 (949)
Q Consensus 245 i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~ 324 (949)
++.+++..+++++++.+++.|.+.+.++.+++..++++++++|||+||+++++++++|+.+|+++|+++|+++++|+||+
T Consensus 243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~ 322 (885)
T 3b8c_A 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 322 (885)
T ss_dssp HHHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhC
Confidence 98875554444333333334444556788899999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeCCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccChhhhhcCceEEeeccCCC
Q 041450 325 MDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNP 404 (949)
Q Consensus 325 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s 404 (949)
+|+||||||||||+|+|+|.+..+..+..+.++++++.+++.|+...++||++.|++.++.++.+.+.+++.++.+||+|
T Consensus 323 v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s 402 (885)
T 3b8c_A 323 MDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNP 402 (885)
T ss_dssp CCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCT
T ss_pred CCEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCc
Confidence 99999999999999999998644333444667888899999998876779999999999887766667788899999999
Q ss_pred CCccEEEEEEcCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEE
Q 041450 405 VDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGL 484 (949)
Q Consensus 405 ~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~ 484 (949)
.+|||++++++.+|+.+.++|||||.++++|+.+++.++.+.+.+++++++|+|++++|++.+++.+.+..|++++|+|+
T Consensus 403 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGl 482 (885)
T 3b8c_A 403 VDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482 (885)
T ss_dssp TTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEE
T ss_pred ccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEE
Confidence 99999998887788888999999999999998665666678888999999999999999999988777788899999999
Q ss_pred EecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEE
Q 041450 485 LPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFA 564 (949)
Q Consensus 485 ~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 564 (949)
++++||||||++++|++|+++||+|+|+|||++.||.++|+++||..+..+...+.|.+.++.+++.++++++++.++||
T Consensus 483 i~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~a 562 (885)
T 3b8c_A 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFA 562 (885)
T ss_dssp EEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEE
T ss_pred EEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEE
Confidence 99999999999999999999999999999999999999999999987655566777777666688889999999999999
Q ss_pred eeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHH
Q 041450 565 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRM 644 (949)
Q Consensus 565 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i 644 (949)
|++|+||.++|+.+|++|+.|+|+|||+||+||||+|||||||++|+|+|+++||+++++++|++|+.++++||++|+||
T Consensus 563 rv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni 642 (885)
T 3b8c_A 563 GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRM 642 (885)
T ss_dssp CCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHH
T ss_pred EECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHhhhcchhccccCCCCCCCCCCchhhHHHHHHHHHHHHHHHH
Q 041450 645 KNYTIYAVSITIRIVLGFLLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMAL 724 (949)
Q Consensus 645 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~il~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 724 (949)
++|+.|++++|+..++.+++..++++++++|++++|+++++|++++++++|+++|+++|++|..++++..+++.|+++++
T Consensus 643 ~~~i~~~l~~n~~~~~~~~~~~~~~~~~l~p~~il~i~l~~d~~~l~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~ 722 (885)
T 3b8c_A 643 KNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722 (885)
T ss_dssp HHHHHHHHHHTTTTTSTTHHHHSSCSSCSCHHHHHHHHHHHHTTTCCCCCCCCCCSSCCCSTTTTTTTTTHHHHHSSTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcCcCHHHHHHHHHHHHHHHHhhcccccCcccCCcchhHHHHHHHHHHHHHHHHH
Confidence 99999999999976666666677888999999999999999999999999999999999999998888888999999999
Q ss_pred HHHHHHHHHHhhcccccccCcccccCchhHHHHHHHHHHHHHHHHHhhhhccCCCCcccChhHHHHHHHHHHHHHHHHHH
Q 041450 725 VTAFFFWLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVERPGVMLVGAFLVAQLLATIIA 804 (949)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 804 (949)
.++++|++.+..++++..+|.+...++..+.++.+|+..+++.++++|++|+++++++++|++++++++++.+++.++++
T Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (885)
T 3b8c_A 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQLIATLIA 802 (885)
T ss_dssp HHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGGGTTCSSSCTTTSTTSTTTTTSGGGSSTTTTTTSSS
T ss_pred HHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccCccHHHHHHHHHHHHHHHHHH
Confidence 99988877665555554455332211234566777777777777789999999998889988877777777766667777
Q ss_pred HhhcccccccCchhHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCchhhhhhhcccccccccccCCchhhHHhHHHhh
Q 041450 805 VYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQ 881 (949)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (949)
+|.++.|+.+.+++|.||+++|+++++++++.|+.|++.|+.+.+.+|+++++++.+++++++++.++|+.+|+.+.
T Consensus 803 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (885)
T 3b8c_A 803 VYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWMRGS 879 (885)
T ss_dssp SSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC-----------------------------------
T ss_pred HhccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHhhhhccccccccchhcccccccccccccc
Confidence 77767777788999999999999999999999999999999999999999999999999999999999999998764
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-130 Score=1212.86 Aligned_cols=827 Identities=36% Similarity=0.599 Sum_probs=708.7
Q ss_pred HHHcCCC-CCCCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCCCCchhHHHHHH
Q 041450 25 FEQLKCT-PKGLTTAEGEKRLQIFGYNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWPDFVGIVV 103 (949)
Q Consensus 25 ~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~ii~ 103 (949)
.+.|+++ .+|||++|+++|+++||+|++++++++.|..|+++|++|++++++++++++++++ +|.+++.|++
T Consensus 77 ~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g-------~~~~~~~i~~ 149 (920)
T 1mhs_A 77 EDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGLE-------DWVDFGVICG 149 (920)
T ss_dssp STTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTCS-------CSSHHHHHHH
T ss_pred HHHhCCCcCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hHHHHHHHHH
Confidence 3457776 6899999999999999999999989999999999999999999999999998864 8999998999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCeeccceeEEecCC-eEEEecC
Q 041450 104 LLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDP-LKIDQAA 182 (949)
Q Consensus 104 ~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~-~~Vdes~ 182 (949)
+++++..+++++|+++++++++|++..+++++|+|||++++|++++|||||+|.|++||+|||||+|++|+. +.||||+
T Consensus 150 vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~ 229 (920)
T 1mhs_A 150 LLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSA 229 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeeccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999985 8999999
Q ss_pred CCCCCceeecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 041450 183 LTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGMFIEI 261 (949)
Q Consensus 183 LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~ 261 (949)
|||||.|+.|.+||.+|+||.+.+|.+.++|++||.+|.+||++++++++ .+++++|+.+++++.++++++++.+++.
T Consensus 230 LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~- 308 (920)
T 1mhs_A 230 LTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIV- 308 (920)
T ss_dssp TSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred cCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 99999999999999999999999999999999999999999999999876 4789999999999987665544433322
Q ss_pred HHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceEEEeCCCCCccCCce
Q 041450 262 IVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL 341 (949)
Q Consensus 262 ~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m 341 (949)
++.+++.+.++...+..++++++++|||+||++++++++.|+.+|+++|+++|+++++|+||++++||||||||||+|+|
T Consensus 309 ~~~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m 388 (920)
T 1mhs_A 309 WVSSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKL 388 (920)
T ss_dssp HHTTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCS
T ss_pred HHHHHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccce
Confidence 22233345678889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEeeccCCCChHHHHHHHHHhccccCC--ChhHHHHHHhccC---hhhhhcCceEEeeccCCCCCccEEEEEEcC
Q 041450 342 SVDKSLIEVFVKGTDSDGLLLAAARASRVENQ--DAIDASIVGMLAD---PKEARAGITEVHFLPFNPVDKRTAITYIDS 416 (949)
Q Consensus 342 ~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~--~~~~~ai~~~~~~---~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~ 416 (949)
+|.+++. ..+.++++++..++.|+...+. ||++.|++.++.. .......++.++++||+|.+|+|+++++.+
T Consensus 389 ~v~~~~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~ 465 (920)
T 1mhs_A 389 SLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESP 465 (920)
T ss_dssp CCCCCBC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCS
T ss_pred eEEEEee---cCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeC
Confidence 9988653 2355666777777777665555 9999999986532 122345688999999999999999998877
Q ss_pred CCcEEEEecCchHHHHHhhcC----chHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCCC
Q 041450 417 NGDWHRTSKGAPEQIIDLCGL----KGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPR 492 (949)
Q Consensus 417 ~g~~~~~~KGa~e~il~~~~~----~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~lr 492 (949)
+|+.+.++||||+.++++|.. +++.++.+.+.+++++++|+|++++|++. .|++|+|+|+++++||||
T Consensus 466 ~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~--------~e~~l~~lGli~i~Dp~R 537 (920)
T 1mhs_A 466 QGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR--------GEGSWEILGIMPCMDPPR 537 (920)
T ss_dssp SSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS--------SSCSCCCCBBCCCCCCCC
T ss_pred CCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec--------cccccEEEEEEEEecccc
Confidence 888889999999999999974 34556778888999999999999999984 256899999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC--ccccCCccccccCCchHHHHhHhcceEEeeChhh
Q 041450 493 HDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS--SSLLGQSKDESIASMPVEELIEKADGFAGVFPEH 570 (949)
Q Consensus 493 ~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 570 (949)
||++++|++|+++||+|+|+|||++.||.++|+++||..+.++. ..+.|. +.++++++.+.+++.++|||++|+|
T Consensus 538 ~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~---~~~~~~el~~~~~~~~V~arv~P~~ 614 (920)
T 1mhs_A 538 HDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG---GDMPGSEVYDFVEAADGFAEVFPQH 614 (920)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC---CCGGGGGGGTTTTTTSCEESCCSTH
T ss_pred ccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc---ccCCHHHHHHHHhhCeEEEEeCHHH
Confidence 99999999999999999999999999999999999997543221 123333 4567778888899999999999999
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHH
Q 041450 571 KYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIY 650 (949)
Q Consensus 571 K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~ 650 (949)
|.++|+.+|++|++|+|+|||+||+||||+|||||||++|+|+|+++||+++++++|++|+.++++||++|+||++++.|
T Consensus 615 K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~ 694 (920)
T 1mhs_A 615 KYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVY 694 (920)
T ss_dssp HHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHhhhcchhccccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 041450 651 AVSITIRIVLGFLLVALLWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALVTAFFF 730 (949)
Q Consensus 651 ~l~~~i~~~~~~~~~~~~~~~~~~~~~il~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 730 (949)
.++.|+.....+......++++++|.+++|+++++|++++++++++++++++|.+|+.++++..+++.|+++++.+++.|
T Consensus 695 ~l~~n~~~~~~~~~~~~~~~~~l~~~~il~~~l~~d~~~lal~~e~~~~~~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~ 774 (920)
T 1mhs_A 695 RIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMSVLLGVVLAVGTWITV 774 (920)
T ss_dssp HHHHHHHHHHHHHHHHHSCSCCCCHHHHHHHHHHHTTHHHHCCCCCSGGGGSCCCCCSSSCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhhhhcccCcccccCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999876444444445567779999999999999999999999998888889999888888778888999998887766
Q ss_pred HHHHhhcccccccCcccccCchhHHHHHHHHHHHHHHHHHhhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHHhhccc
Q 041450 731 WLIHDTRFFTNTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTRSRSWSFVERPGVMLVGAFLVAQLLATIIAVYAKWE 810 (949)
Q Consensus 731 ~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 810 (949)
++.+..+ ...+ ...++.+.+|++|+++++++.+++|++|+.+++|.+.+++++++++++.+++.++++++.
T Consensus 775 ~~~~~~~---~~~~---~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 845 (920)
T 1mhs_A 775 TTMYAQG---ENGG---IVQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG--- 845 (920)
T ss_dssp HHHTTTT---TTCC---SSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSSS---
T ss_pred HHHHHhc---cccc---ccchhhHHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHHHHHHHHHHHHHhh---
Confidence 6544210 0011 011234578999999999999999999998887777788899999998888877775543
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCchhhhhhhcccccccccccCCchhhHHhHHHhhcccccccc
Q 041450 811 FARIEGIGWGWAGAIWIFSIITYLPLDPLKFVIRYAQSGKAWDNLLQNKTAFTTKKDYGKGEREAQWAMAQRTMHGLQT 889 (949)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (949)
++...+++|.+|+.+|+++++++++.++.|++.++. ..|++++++|..++++++...|+ +..+.++++.+|+
T Consensus 846 ~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~---~~fd~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 917 (920)
T 1mhs_A 846 WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDS---VGFDNLMHGKSPKGNQKQRSLED----FVVSLQRVSTQHE 917 (920)
T ss_dssp STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCC---CTTHHHHHHHSTTTHHHHHHHHH----HHHHHGGGHHHHH
T ss_pred hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh---HHHHHHhccCccccccccccchH----HHHHHHHHHhhhc
Confidence 566788999999999999999999999999775543 46778888877655555332232 4555555554443
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-121 Score=1156.05 Aligned_cols=839 Identities=22% Similarity=0.345 Sum_probs=682.9
Q ss_pred chhhhhcc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHH
Q 041450 5 SLEEIKNE-NVDLERIPVAEVFEQLKCT-PKGLTTAEGEKRLQIFGYNKLEEKK-ESKLLKFLGFMWNPLSWVMEAAAIM 81 (949)
Q Consensus 5 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~ail 81 (949)
++++.++| ..+||.++.+|+++.|+++ .+|||++|+++|+++||+|++++++ .+.|++|++||++|+++++++++++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~ 120 (1034)
T 3ixz_A 41 KLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAI 120 (1034)
T ss_pred hHHHHhhhcCcchhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHH
Confidence 46667777 7789999999999999999 5899999999999999999998766 5789999999999999999999999
Q ss_pred HHHHHc---CCC---CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcE
Q 041450 82 AIVLAN---GGG---KPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDI 155 (949)
Q Consensus 82 ~~~l~~---~~~---~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDi 155 (949)
+++... ..+ ....|.++++|+++++++++++++||+|+++++++|++..+++++|+|||++++|++++|||||+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDi 200 (1034)
T 3ixz_A 121 CLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDL 200 (1034)
T ss_pred HHHHHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcE
Confidence 887541 111 12357788888899999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCeeccceeEEecCCeEEEecCCCCCCceeecCCC----------CceeeceeEeeccEEEEEEEeCchhhHHhH
Q 041450 156 ISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPG----------DEVFSGSTCKQGEIEAVVIATGVHTFFGKA 225 (949)
Q Consensus 156 V~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g----------~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki 225 (949)
|.|++||+|||||+|++|+++.||||+|||||.|+.|.++ |++|+||.+.+|++.++|++||.+|.+||+
T Consensus 201 V~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI 280 (1034)
T 3ixz_A 201 VEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRI 280 (1034)
T ss_pred EEEcCCceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHH
Confidence 9999999999999999998899999999999999999875 568999999999999999999999999999
Q ss_pred HHhhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHH
Q 041450 226 AHLVDST-NQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 304 (949)
Q Consensus 226 ~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~ 304 (949)
++++... .+++++|+.+++++.++..+++++.++ +++.+...+.++.+++..++++++++|||+||++++++++++++
T Consensus 281 ~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~ 359 (1034)
T 3ixz_A 281 ASLASGVENEKTPIAIEIEHFVDIIAGLAILFGAT-FFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAK 359 (1034)
T ss_pred HHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHHH
Confidence 9998876 578999999999988755444332222 23334455678889999999999999999999999999999999
Q ss_pred HHhhCCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCC----------------ChHHHHHHHHHhc
Q 041450 305 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGT----------------DSDGLLLAAARAS 368 (949)
Q Consensus 305 ~l~~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~----------------~~~~~l~~~a~~~ 368 (949)
+|+++|+++|+++++|+||++++||||||||||+|+|+|.++++....... ....++..++.|+
T Consensus 360 rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~ 439 (1034)
T 3ixz_A 360 RLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCN 439 (1034)
T ss_pred HHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999998753211100 0124566667775
Q ss_pred ccc---------------CCChhHHHHHHhcc----ChhhhhcCceEEeeccCCCCCccEEEEEEcC---CCcEEEEecC
Q 041450 369 RVE---------------NQDAIDASIVGMLA----DPKEARAGITEVHFLPFNPVDKRTAITYIDS---NGDWHRTSKG 426 (949)
Q Consensus 369 ~~~---------------~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~---~g~~~~~~KG 426 (949)
+.. .+||.+.|++.++. +....+..++.++.+||+|.+|+|++++... +|++.+++||
T Consensus 440 ~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KG 519 (1034)
T 3ixz_A 440 RAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKG 519 (1034)
T ss_pred cceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeC
Confidence 431 23788888887653 3344567788999999999999998877643 3778999999
Q ss_pred chHHHHHhhcC----------chHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccc-----------cCCCCCceEEEEE
Q 041450 427 APEQIIDLCGL----------KGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTK-----------ESEGSPWEFVGLL 485 (949)
Q Consensus 427 a~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~-----------~~~e~~l~llG~~ 485 (949)
|||.|+++|.. +++.++.+.+.+++++.+|+|||++|++.++++++ +..|++++|+|++
T Consensus 520 Ape~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv 599 (1034)
T 3ixz_A 520 APERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLV 599 (1034)
T ss_pred ChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEE
Confidence 99999999963 34567788899999999999999999999875431 2347899999999
Q ss_pred ecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC----------------------CccccCCc
Q 041450 486 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSLLGQS 543 (949)
Q Consensus 486 ~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~----------------------~~~l~~~~ 543 (949)
+++||||++++++|++|+++||+|+|+|||++.||.++|+++||..+... ...+.|..
T Consensus 600 ~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 679 (1034)
T 3ixz_A 600 SMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQ 679 (1034)
T ss_pred eccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHh
Confidence 99999999999999999999999999999999999999999999643110 01112221
Q ss_pred cccccCCchHHHHhHhcc--eEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEec-cchHHHHhcccc
Q 041450 544 KDESIASMPVEELIEKAD--GFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVA-DATDAARSASDI 620 (949)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~--v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDi 620 (949)
...++++++.+.+.+.. +|||++|+||.++|+.+|+.|++|+|+|||+||+||||+||+||||| +|+|+||++||+
T Consensus 680 -l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~ 758 (1034)
T 3ixz_A 680 -LKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADM 758 (1034)
T ss_pred -hhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCE
Confidence 12344556666666553 99999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhccCCCChHHHHHHHHhhhcc-hhccccCCCC
Q 041450 621 VLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVA-LLWKFDFPPFMILIIAILNDGT-IMTISKDRVK 698 (949)
Q Consensus 621 vl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~~-~~~~~~~~~~~il~i~i~~~~~-~~~~~~~~~~ 698 (949)
|+.++++++|+.++++||++|+|+++++.|.+++|+..++.++++. +..+.|++|+|++|+++++|++ ++++++|+++
T Consensus 759 Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~ 838 (1034)
T 3ixz_A 759 ILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAE 838 (1034)
T ss_pred EeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999999999999999999999998766555444 4567899999999999999985 8999999986
Q ss_pred CC---CCCCc-----hhhHHHHHH-HHHHHHHHHHHHHHHHHHHHh-hcccccc-cCcc---------cccC--------
Q 041450 699 PS---PMPDS-----WKLKEIFGT-GVVLGTYMALVTAFFFWLIHD-TRFFTNT-FNLK---------EIHE-------- 750 (949)
Q Consensus 699 ~~---~~~~~-----~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~-~~~~~~~-~g~~---------~~~~-------- 750 (949)
+. ++|.+ ...++++.. .+..|+++++.+++.|++.+. .++.+.. +|.. ...+
T Consensus 839 ~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (1034)
T 3ixz_A 839 SDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTF 918 (1034)
T ss_pred hhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccch
Confidence 54 12222 223344444 345589998888876665442 2222110 1110 0000
Q ss_pred -----chhHHHHHHHHHHHHHHHHHhhhhccCCCCccc---ChhHHHHHHHHHHHHHHHHHHHhhc--ccccccCchhHH
Q 041450 751 -----KPDMLSAALYLQVSIISQALIFVTRSRSWSFVE---RPGVMLVGAFLVAQLLATIIAVYAK--WEFARIEGIGWG 820 (949)
Q Consensus 751 -----~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 820 (949)
.....+|++|.++++++.++.|++|+++.+.+. ..|+++++++++..++..++ .|.+ -..++..+.+|.
T Consensus 919 ~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~ 997 (1034)
T 3ixz_A 919 GQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFL-CYCPGMPNIFNFMPIRFQ 997 (1034)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHH-HHhhhHHHHhcCCCCCHH
Confidence 012367999999999999999999997644322 23456677766666655444 3433 234567788999
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhh
Q 041450 821 WAGAIWIFSIITYLPLDPLKFVIRYA 846 (949)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~k~~~r~~ 846 (949)
+|++++++++++++++++.|++.|++
T Consensus 998 ~w~~~~~~~~~~~~~~e~~K~~~r~~ 1023 (1034)
T 3ixz_A 998 WWLVPMPFGLLIFVYDEIRKLGVRCC 1023 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999998765
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-121 Score=1161.10 Aligned_cols=839 Identities=23% Similarity=0.358 Sum_probs=683.9
Q ss_pred hhhhhcc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccccc-ccchHHHHHHHHHhHHHHHHHHHHHHH
Q 041450 6 LEEIKNE-NVDLERIPVAEVFEQLKCT-PKGLTTAEGEKRLQIFGYNKLEEK-KESKLLKFLGFMWNPLSWVMEAAAIMA 82 (949)
Q Consensus 6 ~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~-~~~~~~~~~~~~~~~~~~~l~~~ail~ 82 (949)
+++.+++ .++||.++.+|+++.|+++ .+|||++|+++|+++||+|+++++ +.+.|..|+++|++|++++++++++++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls 116 (1028)
T 2zxe_A 37 LDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILC 116 (1028)
T ss_dssp CCTTTTSCCCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHH
T ss_pred HHHHhhhcCcchhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4455443 6799999999999999998 689999999999999999999986 478899999999999999999999999
Q ss_pred HHHHc-----CCC-CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEE
Q 041450 83 IVLAN-----GGG-KPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDII 156 (949)
Q Consensus 83 ~~l~~-----~~~-~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV 156 (949)
++++. +.. ...+|+++++|+++++++++++++||+|+++++++|++..+++++|+|||++++|++++|||||+|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV 196 (1028)
T 2zxe_A 117 FLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLV 196 (1028)
T ss_dssp HHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEE
T ss_pred HHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEE
Confidence 87641 110 112577888888999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCeeccceeEEecCCeEEEecCCCCCCceeecCCCC----------ceeeceeEeeccEEEEEEEeCchhhHHhHH
Q 041450 157 SIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPGD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKAA 226 (949)
Q Consensus 157 ~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~----------~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~ 226 (949)
.|++||+|||||+|++|+.|+||||+|||||.|+.|.+++ ++|+||.|.+|.+.++|++||.+|.+||++
T Consensus 197 ~l~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~ 276 (1028)
T 2zxe_A 197 EVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIA 276 (1028)
T ss_dssp EEETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHH
T ss_pred EECCCCEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHH
Confidence 9999999999999999977999999999999999999886 599999999999999999999999999999
Q ss_pred Hhhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHH
Q 041450 227 HLVDST-NQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 305 (949)
Q Consensus 227 ~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~ 305 (949)
+++..+ .+++++|+.+++++.++..++++..++.++ .+.+.+.+|..++..++++++++|||+||+++++++++++.+
T Consensus 277 ~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~ 355 (1028)
T 2zxe_A 277 TLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFI-LSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 355 (1028)
T ss_dssp HHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHH
T ss_pred HhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHH
Confidence 999876 578999999999988765544443333222 233345678888999999999999999999999999999999
Q ss_pred HhhCCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeec---cCC-----------CCh--HHHHHHHHHhcc
Q 041450 306 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVF---VKG-----------TDS--DGLLLAAARASR 369 (949)
Q Consensus 306 l~~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~---~~~-----------~~~--~~~l~~~a~~~~ 369 (949)
|+++|+++|+++++|+||++++||||||||||+|+|+|.++.+... ..+ .+. +.++..++.|++
T Consensus 356 mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~ 435 (1028)
T 2zxe_A 356 MARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNR 435 (1028)
T ss_dssp HHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCC
T ss_pred HhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999865211 000 011 256677777753
Q ss_pred cc---------------CCChhHHHHHHhcc----ChhhhhcCceEEeeccCCCCCccEEEEEEcC---CCcEEEEecCc
Q 041450 370 VE---------------NQDAIDASIVGMLA----DPKEARAGITEVHFLPFNPVDKRTAITYIDS---NGDWHRTSKGA 427 (949)
Q Consensus 370 ~~---------------~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~---~g~~~~~~KGa 427 (949)
.. .+||.|.|++.++. +....+..++.++.+||+|.+|||+++++.+ +|++++++|||
T Consensus 436 ~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA 515 (1028)
T 2zxe_A 436 AVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGA 515 (1028)
T ss_dssp CEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEEC
T ss_pred CeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCC
Confidence 21 24788889988764 3333456688999999999999999999864 57889999999
Q ss_pred hHHHHHhhcC----------chHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccc-----------cCCCCCceEEEEEe
Q 041450 428 PEQIIDLCGL----------KGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTK-----------ESEGSPWEFVGLLP 486 (949)
Q Consensus 428 ~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~-----------~~~e~~l~llG~~~ 486 (949)
||.|+++|.. +++.++.+.+.+++|+++|+|||++|++.+++.++ +..|.+++|+|+++
T Consensus 516 ~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~ 595 (1028)
T 2zxe_A 516 PERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMA 595 (1028)
T ss_dssp HHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEE
T ss_pred cHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeec
Confidence 9999999963 34556778889999999999999999999865421 23468999999999
Q ss_pred cCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC----------------------CccccCCcc
Q 041450 487 LFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSLLGQSK 544 (949)
Q Consensus 487 i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~----------------------~~~l~~~~~ 544 (949)
++||||+|++++|++|+++||+++|+|||++.||.++|++|||..+... ...+.|...
T Consensus 596 i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l 675 (1028)
T 2zxe_A 596 MIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDL 675 (1028)
T ss_dssp EECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHH
T ss_pred cCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHh
Confidence 9999999999999999999999999999999999999999999743110 011122111
Q ss_pred ccccCCchHHHHhHhcc--eEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEec-cchHHHHhccccc
Q 041450 545 DESIASMPVEELIEKAD--GFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVA-DATDAARSASDIV 621 (949)
Q Consensus 545 ~~~~~~~~~~~~~~~~~--v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDiv 621 (949)
..++++++++++.+.+ +|||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+|+++||++
T Consensus 676 -~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~V 754 (1028)
T 2zxe_A 676 -KDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMI 754 (1028)
T ss_dssp -TTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEE
T ss_pred -hhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEE
Confidence 1234556777777775 99999999999999999999999999999999999999999999999 7999999999999
Q ss_pred ccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhccCCCChHHHHHHHHhhhcc-hhccccCCCCC
Q 041450 622 LTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVA-LLWKFDFPPFMILIIAILNDGT-IMTISKDRVKP 699 (949)
Q Consensus 622 l~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~~-~~~~~~~~~~~il~i~i~~~~~-~~~~~~~~~~~ 699 (949)
+.+++|++|+.++++||++|+|+++++.|.+++|+..++.+++.. +..+.+++|+|++|+++++|++ +++++++++++
T Consensus 755 l~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~ 834 (1028)
T 2zxe_A 755 LLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAES 834 (1028)
T ss_dssp ETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSS
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccch
Confidence 999999999999999999999999999999999997766655544 4467899999999999999975 78899988765
Q ss_pred C---CCCCch-----hhHHHHHH-HHHHHHHHHHHHHHHHHHHHh-hccccc--------ccC--cccc----cC-----
Q 041450 700 S---PMPDSW-----KLKEIFGT-GVVLGTYMALVTAFFFWLIHD-TRFFTN--------TFN--LKEI----HE----- 750 (949)
Q Consensus 700 ~---~~~~~~-----~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~-~~~~~~--------~~g--~~~~----~~----- 750 (949)
. .+|..+ ..++.+.. ++..|+++++++++.|++.+. .++.+. ++. .+.. ..
T Consensus 835 ~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (1028)
T 2zxe_A 835 DIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYE 914 (1028)
T ss_dssp CGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHH
T ss_pred hhhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchh
Confidence 3 223322 22344444 456799999988877665432 222100 000 0000 00
Q ss_pred ----chhHHHHHHHHHHHHHHHHHhhhhccCCCCcc--cChhHHHHHHHHHHHHHHHHHHHhhc-ccccccCchhHHHHH
Q 041450 751 ----KPDMLSAALYLQVSIISQALIFVTRSRSWSFV--ERPGVMLVGAFLVAQLLATIIAVYAK-WEFARIEGIGWGWAG 823 (949)
Q Consensus 751 ----~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 823 (949)
...+.+|++|+.+++++.+++|++|+++.+++ ..+|+++++++++..++..++.+.+. -.++.+.+.+|.+|+
T Consensus 915 ~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~ 994 (1028)
T 2zxe_A 915 QRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWF 994 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCCCCCGGGGG
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHHhhhcCCCCCHHHHH
Confidence 01257899999999999999999999765422 24566777777777766655543322 234567778888888
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhh
Q 041450 824 AIWIFSIITYLPLDPLKFVIRYA 846 (949)
Q Consensus 824 ~~~~~~~~~~~~~~~~k~~~r~~ 846 (949)
+++.++++.++..++.|++.|++
T Consensus 995 ~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 995 CAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcc
Confidence 88999999999999999887754
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-118 Score=1131.17 Aligned_cols=831 Identities=26% Similarity=0.340 Sum_probs=668.0
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHHcCC---
Q 041450 15 DLERIPVAEVFEQLKCT-PKGLTTAEGEKRLQIFGYNKLEEKK-ESKLLKFLGFMWNPLSWVMEAAAIMAIVLANGG--- 89 (949)
Q Consensus 15 ~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~ail~~~l~~~~--- 89 (949)
+||..+.+|+++.|+++ .+|||++|+++|+++||+|++++++ +++|+.|++||++|++++++++++++++++...
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~ 83 (995)
T 3ar4_A 4 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 83 (995)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred hhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 68999999999999998 6799999999999999999999865 688999999999999999999999999975321
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCe--EEEEeccccCCCcEEEEcCCCeeccc
Q 041450 90 GKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEK--WSEQEAEILVPGDIISIKLGDIVPAD 167 (949)
Q Consensus 90 ~~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~--~~~i~~~~Lv~GDiV~l~~Gd~IPaD 167 (949)
+....|.+++.|+++++++..+++++|+|+++++++|++..+++++|+|||+ .++|+++||+|||+|.|++||+||||
T Consensus 84 ~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD 163 (995)
T 3ar4_A 84 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPAD 163 (995)
T ss_dssp GGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSE
T ss_pred cchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCccccc
Confidence 1123788888899999999999999999999999999999999999999987 69999999999999999999999999
Q ss_pred eeEEe--cCCeEEEecCCCCCCceeecCCC-------------CceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhcc
Q 041450 168 ARLLE--GDPLKIDQAALTGESLPVTKNPG-------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 232 (949)
Q Consensus 168 ~~ll~--g~~~~Vdes~LTGEs~pv~K~~g-------------~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~ 232 (949)
|+|++ ++.|+||||+|||||.|+.|+++ |.+|+||.+.+|.++++|++||.+|.+||++++++++
T Consensus 164 ~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 243 (995)
T 3ar4_A 164 IRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAAT 243 (995)
T ss_dssp EEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTC
T ss_pred EEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcC
Confidence 99964 45689999999999999999987 6899999999999999999999999999999999876
Q ss_pred -CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h----ccCcHH----HHHHHHHHHHHhhcCCchhHHHHHHHHHH
Q 041450 233 -NQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMWA-I----QRRSYR----DGIDNLLVLLIGGIPIAMPTVLSVTMAIG 302 (949)
Q Consensus 233 -~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~-~----~~~~~~----~~i~~~l~ll~~~iP~aL~~~~~i~~~~~ 302 (949)
.+++++|+.+++++.++..++++.+++.+++.+. + .+.+|. ..+..++++++++|||+||++++++++++
T Consensus 244 ~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~ 323 (995)
T 3ar4_A 244 EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALG 323 (995)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHH
Confidence 5889999999999887665544433332222211 1 112232 34557788999999999999999999999
Q ss_pred HHHHhhCCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeec--------------cCCCC------------
Q 041450 303 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVF--------------VKGTD------------ 356 (949)
Q Consensus 303 ~~~l~~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~--------------~~~~~------------ 356 (949)
+.+|+++|+++|+++++|+||++++||||||||||+|+|+|.++.+... ...+.
T Consensus 324 ~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 403 (995)
T 3ar4_A 324 TRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPI 403 (995)
T ss_dssp HHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEEC
T ss_pred HHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccccccccc
Confidence 9999999999999999999999999999999999999999999865310 00000
Q ss_pred -------hHHHHHHHHHhcccc------------CCChhHHHHHHhccCh-------h-------------hhhcCceEE
Q 041450 357 -------SDGLLLAAARASRVE------------NQDAIDASIVGMLADP-------K-------------EARAGITEV 397 (949)
Q Consensus 357 -------~~~~l~~~a~~~~~~------------~~~~~~~ai~~~~~~~-------~-------------~~~~~~~~l 397 (949)
...++.+++.|++.. .+||.+.|++.++.+. . ..+..++.+
T Consensus 404 ~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 483 (995)
T 3ar4_A 404 RSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKE 483 (995)
T ss_dssp CGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEE
T ss_pred cccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceE
Confidence 123445566665432 1589999988654211 0 123467899
Q ss_pred eeccCCCCCccEEEEEEcCCC-----cEEEEecCchHHHHHhhcC----------chHHHHHHHHHHHHH--HHhcCeEE
Q 041450 398 HFLPFNPVDKRTAITYIDSNG-----DWHRTSKGAPEQIIDLCGL----------KGEMRRKAHQIIDNF--AERGLRAL 460 (949)
Q Consensus 398 ~~~pF~s~~kr~sv~~~~~~g-----~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~--a~~GlR~l 460 (949)
+.+||+|.+|||+++++.++| +..+++|||||.|+++|.. +++.++.+.+.+++| +++|+|||
T Consensus 484 ~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvL 563 (995)
T 3ar4_A 484 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 563 (995)
T ss_dssp EEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred EEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEE
Confidence 999999999999999987666 6789999999999999963 245567788899999 99999999
Q ss_pred EEEEeecCCcc----------ccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 041450 461 GVGRQTVPEKT----------KESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMG 530 (949)
Q Consensus 461 ~~a~~~~~~~~----------~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 530 (949)
++|||.++..+ ++..|++++|+|+++++||+|+|++++|+.|+++||+++|+|||+..||.++|+++||.
T Consensus 564 a~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~ 643 (995)
T 3ar4_A 564 ALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF 643 (995)
T ss_dssp EEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSS
T ss_pred EEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcC
Confidence 99999886432 23457899999999999999999999999999999999999999999999999999996
Q ss_pred CCCC--CCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEec
Q 041450 531 TNMY--PSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVA 608 (949)
Q Consensus 531 ~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg 608 (949)
.... ....+.|.+. +.++++++.+++.+..+|||++|+||.++|+.+|++|+.|+|+|||+||+||||+||||||||
T Consensus 644 ~~~~~i~~~~~~g~~~-~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg 722 (995)
T 3ar4_A 644 GENEEVADRAYTGREF-DDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG 722 (995)
T ss_dssp CTTCCCTTTEEEHHHH-HTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET
T ss_pred CCCCcccceEEEchhh-hhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC
Confidence 5321 1223333322 245556788888899999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhccCCCChHHHHHHHHhhhc
Q 041450 609 DATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLV-ALLWKFDFPPFMILIIAILNDG 687 (949)
Q Consensus 609 ~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~l~~~i~~~~~~~~~-~~~~~~~~~~~~il~i~i~~~~ 687 (949)
+|+++|+++||+++.+++|+.++.++++||++|+||++++.|.+++|+..++..+++ .+.++.+++|+|++|+|+++|.
T Consensus 723 ~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~ 802 (995)
T 3ar4_A 723 SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDG 802 (995)
T ss_dssp TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTH
T ss_pred CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999776555444 3456678999999999999997
Q ss_pred c-hhccccCCCCCC-------CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcc-----ccc-ccCcc-----
Q 041450 688 T-IMTISKDRVKPS-------PMPDSWKLKEIFGTGVVLGTYMALVTAFFFWLIHD--TRF-----FTN-TFNLK----- 746 (949)
Q Consensus 688 ~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~-----~~~-~~g~~----- 746 (949)
+ +++++++++++. +++++...+..+..+++.|+++++++++.|++.+. .+. ... .++..
T Consensus 803 ~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (995)
T 3ar4_A 803 LPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHP 882 (995)
T ss_dssp HHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCS
T ss_pred HHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhccccccccccc
Confidence 4 788998876543 12223333445556667799998888755443221 100 000 00000
Q ss_pred ccc----C--chhHHHHHHHHHHHHHHHHHhhhhccCCCCcc--c-ChhHHHHHHHHHHHHHHHHHHHhhc--ccccccC
Q 041450 747 EIH----E--KPDMLSAALYLQVSIISQALIFVTRSRSWSFV--E-RPGVMLVGAFLVAQLLATIIAVYAK--WEFARIE 815 (949)
Q Consensus 747 ~~~----~--~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~--~-~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~ 815 (949)
... . .....+|++|..+++++.+..+++|+...+++ . ..|+++++++++..++..++ .|.+ -.++.+.
T Consensus 883 ~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~ 961 (995)
T 3ar4_A 883 HFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLI-LYVDPLPMIFKLK 961 (995)
T ss_dssp CCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHH-HHSTHHHHHTTCC
T ss_pred cccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHH-HHHHHHHHhhccC
Confidence 000 0 01346899999999999999999988653221 1 23567777776665554444 3433 2345667
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q 041450 816 GIGWGWAGAIWIFSIITYLPLDPLKFVIRYAQ 847 (949)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~ 847 (949)
+.+|..|+++++++++.+++.++.|++.|.+.
T Consensus 962 ~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~ 993 (995)
T 3ar4_A 962 ALDLTQWLMVLKISLPVIGLDEILKFIARNYL 993 (995)
T ss_dssp CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 78888888889999999999999999877653
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-83 Score=783.42 Aligned_cols=522 Identities=22% Similarity=0.353 Sum_probs=451.4
Q ss_pred CCchhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEe-CCeEEEEeccccCCCcEEEEcCCCeeccceeE
Q 041450 93 PDWPDFV-GIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLR-DEKWSEQEAEILVPGDIISIKLGDIVPADARL 170 (949)
Q Consensus 93 ~~~~~~~-~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~r-dg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~l 170 (949)
..|++.+ +|+++++++..++.+.++|+.+++++|++..+++++++| ||++++|++++|+|||+|.|++||+|||||+|
T Consensus 185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~v 264 (736)
T 3rfu_A 185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEV 264 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEE
Confidence 4566554 666888999999999999999999999999999999888 99999999999999999999999999999999
Q ss_pred EecCCeEEEecCCCCCCceeecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhcc-CCCChHHHHHHHHHHHH
Q 041450 171 LEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFC 249 (949)
Q Consensus 171 l~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~ 249 (949)
++| .+.||||+|||||.|+.|++|+.+|+||.+.+|.++++|++||.+|.+||+.++++++ .+++++|+..++++.++
T Consensus 265 l~G-~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~ 343 (736)
T 3rfu_A 265 QEG-RSFVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWF 343 (736)
T ss_dssp CSS-CEEEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHH
T ss_pred EEC-ceEeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHH
Confidence 999 5789999999999999999999999999999999999999999999999999999876 57889999999999887
Q ss_pred HHHHHHHHHHHHHHHHHhccC--cHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceE
Q 041450 250 ICSIAVGMFIEIIVMWAIQRR--SYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDV 327 (949)
Q Consensus 250 ~~~i~~~~~~~~~~~~~~~~~--~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~ 327 (949)
+..++++.++. ++.|++.+. .+..++..++++++++|||+|++++++++..+..+++++|+++|+++++|+||++|+
T Consensus 344 v~~vl~ia~~~-~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~ 422 (736)
T 3rfu_A 344 VPAVILVAVLS-FIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNT 422 (736)
T ss_dssp HHHHHHHHHHH-HHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCE
T ss_pred HHHHHHHHHHH-HHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCE
Confidence 76655544443 344544433 377889999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccChhhhhcCceEEeeccCCCCCc
Q 041450 328 LCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDK 407 (949)
Q Consensus 328 i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~k 407 (949)
||||||||||+|+|+|.++. ..+.+.++++.+++..+... +||++.|++.++.+. ++......+|++..+
T Consensus 423 i~fDKTGTLT~g~~~v~~i~----~~~~~~~~~l~~aa~le~~s-~hPla~Aiv~~a~~~-----~~~~~~~~~f~~~~g 492 (736)
T 3rfu_A 423 LVVDKTGTLTEGHPKLTRIV----TDDFVEDNALALAAALEHQS-EHPLANAIVHAAKEK-----GLSLGSVEAFEAPTG 492 (736)
T ss_dssp EEECCBTTTBCSSCEEEEEE----ESSSCHHHHHHHHHHHHHSS-CCHHHHHHHHHHHTT-----CCCCCCCSCCCCCTT
T ss_pred EEEeCCCCCcCCceEEEEEE----ecCCCHHHHHHHHHHHhhcC-CChHHHHHHHHHHhc-----CCCccCcccccccCC
Confidence 99999999999999999986 24567888888877666554 499999999887532 233334457888777
Q ss_pred cEEEEEEcCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEec
Q 041450 408 RTAITYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPL 487 (949)
Q Consensus 408 r~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i 487 (949)
+.... ..+|+ .+.+|+++.+.+..... ....+..++++.+|+|++++|++. +++|++++
T Consensus 493 ~gv~~--~~~g~--~~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~i~i 551 (736)
T 3rfu_A 493 KGVVG--QVDGH--HVAIGNARLMQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KTVALLVV 551 (736)
T ss_dssp TEEEE--CSSSS--CEEEESHHHHHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred ceEEE--EECCE--EEEEcCHHHHHHcCCCh----hHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEe
Confidence 65332 23454 35679999876644322 234566788999999999999853 89999999
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeC
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVF 567 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~s 567 (949)
+|++|++++++|++|+++|++++|+|||+..+|..+|+++|+. +++++++
T Consensus 552 ~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~------------------------------~v~a~~~ 601 (736)
T 3rfu_A 552 EDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK------------------------------KVVAEIM 601 (736)
T ss_dssp ECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC------------------------------CEECSCC
T ss_pred eccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC------------------------------EEEEecC
Confidence 9999999999999999999999999999999999999999984 3699999
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHH
Q 041450 568 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNY 647 (949)
Q Consensus 568 P~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~ 647 (949)
|+||.++|+.+|++|+.|+|+|||.||+|||++||||||||+|+|.++++||+++++++++.++.++++||++++||+++
T Consensus 602 P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qn 681 (736)
T 3rfu_A 602 PEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQN 681 (736)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-ccCCCChHH
Q 041450 648 TIYAVSITIRIVLGFLLVALL-WKFDFPPFM 677 (949)
Q Consensus 648 ~~~~l~~~i~~~~~~~~~~~~-~~~~~~~~~ 677 (949)
+.|++.+|+..+....+..+. +++.++|+.
T Consensus 682 l~~a~~yN~~~iplAag~l~p~~G~~l~P~~ 712 (736)
T 3rfu_A 682 LFFAFIYNVLGVPLAAGVLYPLTGLLLSPMI 712 (736)
T ss_dssp HHHHHHHHHHHHHHHHTSSTTTSSCCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhhHHH
Confidence 999999998655443322222 355567764
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-82 Score=764.39 Aligned_cols=524 Identities=24% Similarity=0.346 Sum_probs=440.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCeeccceeEEec
Q 041450 94 DWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEG 173 (949)
Q Consensus 94 ~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 173 (949)
+|..++.++++++++..++.+.++|+.+++++|++..+++++|+|||++++|+++||+|||+|.|++||+|||||+|++|
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 174 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 174 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 34456667777788888888888888888999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCCCCceeecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHH
Q 041450 174 DPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 252 (949)
Q Consensus 174 ~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~ 252 (949)
.+.||||+|||||.|+.|++||.+|+||.+.+|.++++|++||.+|.+||+.++++++ .+++++|+..+++..+++..
T Consensus 175 -~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 253 (645)
T 3j08_A 175 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 253 (645)
T ss_dssp -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHH
T ss_pred -cEEEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999887 47899999999999887665
Q ss_pred HHHHHHHHHHHHHHhc-cCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceEEEeC
Q 041450 253 IAVGMFIEIIVMWAIQ-RRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 331 (949)
Q Consensus 253 i~~~~~~~~~~~~~~~-~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~D 331 (949)
+++..++ .++.|++. +.++..++..++++++++|||+|++++++++..+..+++++|+++|+++++|+||++|++|||
T Consensus 254 vl~~a~~-~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fD 332 (645)
T 3j08_A 254 VLLVAIS-AFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFD 332 (645)
T ss_dssp HHHHHHH-HHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEE
T ss_pred HHHHHHH-HHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEc
Confidence 5543333 23334333 455667788899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccChhhhhcCceEEeeccCCCCCccEEE
Q 041450 332 KTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAI 411 (949)
Q Consensus 332 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv 411 (949)
||||||+|+|+|.++.. .+.++++++.+++.++...+ ||++.|++..+.+.. ++..+..+|.+..++...
T Consensus 333 KTGTLT~~~~~v~~~~~----~~~~~~~~l~~aa~~e~~s~-hPla~Aiv~~a~~~g-----~~~~~~~~~~~~~g~g~~ 402 (645)
T 3j08_A 333 KTGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRSE-HPIAEAIVKKALEHG-----IELGEPEKVEVIAGEGVV 402 (645)
T ss_dssp GGGTSSSSCCEEEEEEE----SSSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTT-----CCCCSCCCCEEETTTEEE
T ss_pred CcccccCCCeEEEEEEe----CCCCHHHHHHHHHHHhhcCC-ChhHHHHHHHHHhcC-----CCcCCccceEEecCCceE
Confidence 99999999999999874 25678888888887766554 999999998764321 111111122222221111
Q ss_pred EEEcCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCC
Q 041450 412 TYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPP 491 (949)
Q Consensus 412 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~l 491 (949)
. ..+.+|+++.+.+... ..++...+..++++.+|+|+++++++ .+++|+++++|++
T Consensus 403 ~--------~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~l~va~~-------------~~~~G~i~~~D~l 458 (645)
T 3j08_A 403 A--------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARN-------------GRVEGIIAVSDTL 458 (645)
T ss_dssp E--------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCCCEEEEET-------------TEEEEEEEEECCC
T ss_pred E--------EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEEC-------------CEEEEEEEecCCc
Confidence 0 2356788887654322 22345667788999999999999984 3899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhH
Q 041450 492 RHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHK 571 (949)
Q Consensus 492 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK 571 (949)
||+++++|++|+++|++++|+|||+..+|.++|+++|+. .+|++++|+||
T Consensus 459 ~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K 508 (645)
T 3j08_A 459 KESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQK 508 (645)
T ss_dssp TTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCH
T ss_pred hhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC------------------------------EEEEeCCHHhH
Confidence 999999999999999999999999999999999999984 46999999999
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHH
Q 041450 572 YEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYA 651 (949)
Q Consensus 572 ~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~ 651 (949)
.++|+.+|++ +.|+|+|||.||+|||+.||+|||||+|+|.++++||+++.+++++.++.++++||++|+|+++++.|+
T Consensus 509 ~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a 587 (645)
T 3j08_A 509 SEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWA 587 (645)
T ss_dssp HHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HhhccCCCChHHHHHHHHh
Q 041450 652 VSITIRIVLGFLLV-ALLWKFDFPPFMILIIAIL 684 (949)
Q Consensus 652 l~~~i~~~~~~~~~-~~~~~~~~~~~~il~i~i~ 684 (949)
+++|+..+...++. ..++++.++|+.-.+...+
T Consensus 588 ~~~N~~~i~la~~~~~~~~g~~l~p~~a~~~m~~ 621 (645)
T 3j08_A 588 LIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAM 621 (645)
T ss_dssp HHHHHHHHHHHTTTTTTTCCCSCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhHhhhcccccCHHHHHHHHhc
Confidence 99998644332221 2234557788754433333
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-81 Score=770.34 Aligned_cols=525 Identities=24% Similarity=0.347 Sum_probs=442.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCeeccceeEEec
Q 041450 94 DWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEG 173 (949)
Q Consensus 94 ~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 173 (949)
+|..++.++++++++..++.+.++|+++++++|++..+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 252 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 252 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 34455667777788888888888888888999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCCCCceeecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHH
Q 041450 174 DPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 252 (949)
Q Consensus 174 ~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~ 252 (949)
.+.||||+|||||.|+.|++||.+|+||.+.+|.+.++|++||.+|.+||+.++++++ .+++++|+..+++..+++..
T Consensus 253 -~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 331 (723)
T 3j09_A 253 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 331 (723)
T ss_dssp -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHH
T ss_pred -CeEEecccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999887 58899999999999887665
Q ss_pred HHHHHHHHHHHHHHhc-cCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceEEEeC
Q 041450 253 IAVGMFIEIIVMWAIQ-RRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 331 (949)
Q Consensus 253 i~~~~~~~~~~~~~~~-~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~D 331 (949)
+++..++. ++.|++. +.++..++..++++++++|||+|++++++++..+..+++++|+++|+++++|+||++|++|||
T Consensus 332 vl~~a~~~-~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fD 410 (723)
T 3j09_A 332 VLLVAISA-FIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFD 410 (723)
T ss_dssp HHHHHHHH-HTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEE
T ss_pred HHHHHHHH-HHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEc
Confidence 55433332 3334333 456677889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccChhhhhcCceEEeeccCCCCCccEEE
Q 041450 332 KTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAI 411 (949)
Q Consensus 332 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv 411 (949)
||||||+|+|+|.++.. .+.++++++.+++.++...+ ||++.+++..+.+.. +......+|.+...+...
T Consensus 411 KTGTLT~g~~~v~~~~~----~~~~~~~~l~~aa~~e~~s~-hP~~~Ai~~~a~~~~-----~~~~~~~~~~~~~g~g~~ 480 (723)
T 3j09_A 411 KTGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRSE-HPIAEAIVKKALEHG-----IELGEPEKVEVIAGEGVV 480 (723)
T ss_dssp HHHHTSCSCCEEEEEEE----SSSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTT-----CCCCSCCCCEEETTTEEE
T ss_pred CCCccccCceEEEEEEe----CCCCHHHHHHHHHHHhccCC-CchhHHHHHHHHhcC-----CCcCCccceEEecCCceE
Confidence 99999999999999874 24677888888887766554 999999998764221 111111122222221110
Q ss_pred EEEcCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCC
Q 041450 412 TYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPP 491 (949)
Q Consensus 412 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~l 491 (949)
. ..+.+|+++.+.+... ..++...+.+++++.+|+|+++++++ .+++|+++++|++
T Consensus 481 ~--------~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~va~~-------------~~~~G~i~i~D~~ 536 (723)
T 3j09_A 481 A--------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARN-------------GRVEGIIAVSDTL 536 (723)
T ss_dssp E--------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCEEEEEEET-------------TEEEEEEEEECCS
T ss_pred E--------EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEEC-------------CEEEEEEeecCCc
Confidence 0 2356788887654322 22345677788999999999999984 4899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhH
Q 041450 492 RHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHK 571 (949)
Q Consensus 492 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK 571 (949)
||+++++|++|+++|++++|+|||+..+|..+|+++|+. .+|++++|+||
T Consensus 537 ~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K 586 (723)
T 3j09_A 537 KESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQK 586 (723)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCH
T ss_pred chhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc------------------------------EEEccCCHHHH
Confidence 999999999999999999999999999999999999984 46999999999
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHHHH
Q 041450 572 YEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYA 651 (949)
Q Consensus 572 ~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~ 651 (949)
.++|+.+|++ +.|+|+|||.||+|||+.||||||||+|+|+++++||+++.+++++.++.++++||++|+|+++++.|+
T Consensus 587 ~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a 665 (723)
T 3j09_A 587 SEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWA 665 (723)
T ss_dssp HHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HhhccCCCChHHHHHHHHhh
Q 041450 652 VSITIRIVLGFLLV-ALLWKFDFPPFMILIIAILN 685 (949)
Q Consensus 652 l~~~i~~~~~~~~~-~~~~~~~~~~~~il~i~i~~ 685 (949)
+++|+..+...++. ..++++.++|+.-.+...+.
T Consensus 666 ~~~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~s 700 (723)
T 3j09_A 666 LIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMS 700 (723)
T ss_dssp HHHHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHhhhhccccccCHHHHHHHHhcc
Confidence 99998654433222 22355678887644433333
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-33 Score=303.47 Aligned_cols=259 Identities=21% Similarity=0.303 Sum_probs=199.7
Q ss_pred HHHHHhhCCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHH
Q 041450 302 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIV 381 (949)
Q Consensus 302 ~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~ 381 (949)
++.+++++|+++|+++++|.|+++++||||||||||+|+|.+.++. ++++++.+++..... +.||++.++.
T Consensus 5 a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~~-s~hp~a~ai~ 75 (263)
T 2yj3_A 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEAL-SSHPIAKAIV 75 (263)
Confidence 4578899999999999999999999999999999999999998753 345566666655544 4499999988
Q ss_pred HhccChhhhhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEE
Q 041450 382 GMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALG 461 (949)
Q Consensus 382 ~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~ 461 (949)
.++.+...........+.++-.+.+. .+ ++ ..+..|.++ +|.+ +.
T Consensus 76 ~~~~~~g~~~~~~~~~~~~~G~g~~~----~~---~~--~~~~~G~~~-------------------------~~~~-~~ 120 (263)
T 2yj3_A 76 KYAKEQGVKILEVKDFKEISGIGVRG----KI---SD--KIIEVKKAE-------------------------NNND-IA 120 (263)
Confidence 77642210000000000000000000 00 00 001111111 2333 44
Q ss_pred EEEeecCCccccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccC
Q 041450 462 VGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 541 (949)
Q Consensus 462 ~a~~~~~~~~~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~ 541 (949)
+++.. .+.|.+.+.|+++||+.++|+.|++.|+++.|+|||+..++..+++++|+.
T Consensus 121 ~~~~~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~----------- 176 (263)
T 2yj3_A 121 VYING-------------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ----------- 176 (263)
Confidence 44433 689999999999999999999999999999999999999999999999984
Q ss_pred CccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhccccc
Q 041450 542 QSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIV 621 (949)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDiv 621 (949)
+.|+.+.|++|..+++.++..++.|+|+|||.||++|++.|++||+++++++.+++.||++
T Consensus 177 -------------------~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v 237 (263)
T 2yj3_A 177 -------------------EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADII 237 (263)
Confidence 2477778999999999999999999999999999999999999999998889999999999
Q ss_pred ccCCChhHHHHHHHHhHHHHHHHHHH
Q 041450 622 LTEPGLSVIVSAVLTSRAIFQRMKNY 647 (949)
Q Consensus 622 l~~~~l~~i~~~i~~gR~~~~~i~~~ 647 (949)
++.+++..++.++..||+++++|++|
T Consensus 238 ~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 238 LVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 99999999999999999999999875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-27 Score=257.77 Aligned_cols=279 Identities=29% Similarity=0.407 Sum_probs=207.5
Q ss_pred HHHHHhhCCcccccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHH
Q 041450 302 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIV 381 (949)
Q Consensus 302 ~~~~l~~~~i~vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~ 381 (949)
|+++++++|+++|+++++|++++++++|||||||||.+.+.+.++.. . .+ +.++++.+++..+.. +.||++.++.
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~--~-~~-~~~~~l~~~~~~e~~-s~hp~~~a~~ 83 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVP--L-NG-DERELLRLAAIAERR-SEHPIAEAIV 83 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEE--S-SS-CHHHHHHHHHHHTTT-CCSHHHHHHH
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEe--C-CC-CHHHHHHHHHHHhhc-CCCHHHHHHH
Confidence 67889999999999999999999999999999999999999988764 2 24 777888877766544 4599999998
Q ss_pred HhccChhhhhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEE
Q 041450 382 GMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALG 461 (949)
Q Consensus 382 ~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~ 461 (949)
..+... ++.....-++.....+ .+ .. ..+.+|.++.+.+.... .++.+.+..+.+..+|.++++
T Consensus 84 ~~~~~~-----g~~~~~~~~~~~~~G~-~~--~~-----~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~i~ 147 (287)
T 3a1c_A 84 KKALEH-----GIELGEPEKVEVIAGE-GV--VA-----DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAVI 147 (287)
T ss_dssp HHHHHT-----TCCCCCCSCEEEETTT-EE--EE-----TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhc-----CCCccccccceeecCC-Ce--EE-----EEEEECCHHHHHhcCCC---ccHHHHHHHHHHHhCCCeEEE
Confidence 876421 1110000001000000 00 00 12345665544322111 112344556778889999999
Q ss_pred EEEeecCCccccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccC
Q 041450 462 VGRQTVPEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 541 (949)
Q Consensus 462 ~a~~~~~~~~~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~ 541 (949)
+++.. .+.+.+...++++|++.++++.|++.|+++.++||++...+..+.+.+|+.
T Consensus 148 ~~~d~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~----------- 203 (287)
T 3a1c_A 148 VARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------- 203 (287)
T ss_dssp EEETT-------------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------
T ss_pred EEECC-------------EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc-----------
Confidence 99854 789999999999999999999999999999999999999999999999984
Q ss_pred CccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhccccc
Q 041450 542 QSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIV 621 (949)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDiv 621 (949)
..|..+.|+.|...++.++.. ..|+|+||+.||++|.+.|++||+++++.+..+..||++
T Consensus 204 -------------------~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v 263 (287)
T 3a1c_A 204 -------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIV 263 (287)
T ss_dssp -------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEE
T ss_pred -------------------eeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEE
Confidence 246677799999999999888 889999999999999999999999987766667789999
Q ss_pred ccCCChhHHHHHHHHhHHHHHHHH
Q 041450 622 LTEPGLSVIVSAVLTSRAIFQRMK 645 (949)
Q Consensus 622 l~~~~l~~i~~~i~~gR~~~~~i~ 645 (949)
+.++++..+..++..+|+++++|+
T Consensus 264 ~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 264 LIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp ESSSCTHHHHHHHHTTC-------
T ss_pred EeCCCHHHHHHHHHHHHHHHHhhC
Confidence 988999999999999999999885
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-27 Score=221.37 Aligned_cols=110 Identities=29% Similarity=0.487 Sum_probs=104.9
Q ss_pred HHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCeeccceeEEecCCeEEEecCCCCCCceeecCCCCceeec
Q 041450 122 AAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPGDEVFSG 201 (949)
Q Consensus 122 ~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aG 201 (949)
++++|+++.+++++|+|||+++++++++|+|||+|.+++||+|||||+|++|+ +.||||+|||||.|+.|.+||.+|+|
T Consensus 2 al~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-~~vdeS~LTGEs~pv~k~~g~~v~aG 80 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSKGDEVFGA 80 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECTTCEECTT
T ss_pred HHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-EEEEccccCCCCccEEECCCCEEEeC
Confidence 46778888899999999999999999999999999999999999999999994 89999999999999999999999999
Q ss_pred eeEeeccEEEEEEEeCchhhHHhHHHhhhcc
Q 041450 202 STCKQGEIEAVVIATGVHTFFGKAAHLVDST 232 (949)
Q Consensus 202 s~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~ 232 (949)
|.+.+|.+.++|++||.+|.+|++.++++++
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999998754
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.4e-27 Score=220.42 Aligned_cols=116 Identities=28% Similarity=0.484 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEeCCe------EEEEeccccCCCcEEEEcCCCeeccceeEEecCCeEEEecCCCCCCce
Q 041450 116 ENNAGNAAAALMAGLAPKTKVLRDEK------WSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLP 189 (949)
Q Consensus 116 e~~~~~~~~~l~~~~~~~~~V~rdg~------~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~p 189 (949)
++|+.+++++|+++.+++++|+|+|+ +++|++++|+|||+|.|++||+|||||+|++|+ ..||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~-~~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH-SMVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCC-CEEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEcc-EEEEeccccCCCcc
Confidence 56788899999999999999999764 789999999999999999999999999999995 58999999999999
Q ss_pred eecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhcc
Q 041450 190 VTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 232 (949)
Q Consensus 190 v~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~ 232 (949)
+.|.+|+.+|+||.+.+|.+.++|++||.+|.+|+++++++++
T Consensus 81 v~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999998764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4e-25 Score=239.69 Aligned_cols=276 Identities=29% Similarity=0.399 Sum_probs=202.4
Q ss_pred cccchhhhhhcCceEEEeCCCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccChhhhhc
Q 041450 313 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARA 392 (949)
Q Consensus 313 vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~~~ 392 (949)
+|+++++|.|++++.||||++||||.|+++|.++.. .. + +.++++.+++....... ++...++...+........
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~--~~-~-~~~~~~~~~~~~~~~s~-~~~~~a~~~~~~~~g~~~~ 75 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVG--FN-H-SEDELLQIAASLEARSE-HPIAAAIVEEAEKRGFGLT 75 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEE--SS-S-CHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTTCCCC
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEe--cC-C-CHHHHHHHHHHhhccCC-CHHHHHHHHHHHhcCCCCC
Confidence 588999999999999999999999999999998763 22 3 77777777776655443 7888887776542111111
Q ss_pred CceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccc
Q 041450 393 GITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTK 472 (949)
Q Consensus 393 ~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~ 472 (949)
....+...+.. .....+ ++. .+..|.++.+.+...... ....++..++.+.+.+++..
T Consensus 76 ~~~~~~~~~g~----~~~~~~---~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------ 133 (280)
T 3skx_A 76 EVEEFRAIPGK----GVEGIV---NGR--RYMVVSPGYIRELGIKTD-------ESVEKLKQQGKTVVFILKNG------ 133 (280)
T ss_dssp CCEEEEEETTT----EEEEEE---TTE--EEEEECHHHHHHTTCCCC-------TTHHHHHTTTCEEEEEEETT------
T ss_pred CccceeecCCC----EEEEEE---CCE--EEEEecHHHHHHcCCCch-------HHHHHHHhCCCeEEEEEECC------
Confidence 11222222211 111111 232 233466666554432211 23456677888988887743
Q ss_pred cCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCch
Q 041450 473 ESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMP 552 (949)
Q Consensus 473 ~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~ 552 (949)
.++|.+.+.|+++|++.++++.|++.|+++.++||++...+..+.+.+|+.
T Consensus 134 -------~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~---------------------- 184 (280)
T 3skx_A 134 -------EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD---------------------- 184 (280)
T ss_dssp -------EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----------------------
T ss_pred -------EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh----------------------
Confidence 789999999999999999999999999999999999999999999999984
Q ss_pred HHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHH
Q 041450 553 VEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVS 632 (949)
Q Consensus 553 ~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~ 632 (949)
+.|..+.|.+|...++.+.+.. .++|+||+.||++|++.|++|++|+++++.+++.||+++..+++..+..
T Consensus 185 --------~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~ 255 (280)
T 3skx_A 185 --------DYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAA 255 (280)
T ss_dssp --------EEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHH
T ss_pred --------hHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHH
Confidence 2477888999999999998876 5689999999999999999999999988888999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHH
Q 041450 633 AVLTSRAIFQRMKNYTIYAVS 653 (949)
Q Consensus 633 ~i~~gR~~~~~i~~~~~~~l~ 653 (949)
+++.+|++++++++++.|++.
T Consensus 256 ~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 256 IVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHHHTCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988775
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-23 Score=228.68 Aligned_cols=144 Identities=13% Similarity=0.031 Sum_probs=114.5
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHh--HhcceEEe
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELI--EKADGFAG 565 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~v~ar 565 (949)
.+++||+++++++.|+++|++++|+|||...++.++++++|+..... .+..... ..++..+...+ ...+.+++
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~---~i~~n~l--~~~~~~~~~~~~~~~i~~~~k 213 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV---KVVSNFM--DFDENGVLKGFKGELIHVFNK 213 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTE---EEEEECE--EECTTSBEEEECSSCCCTTCH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccc---eEEeeeE--EEcccceeEeccccccchhhc
Confidence 57999999999999999999999999999999999999999864210 0100000 00000000000 01345788
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCccCHHhh---hcCCceeEec-------cchHHHHhcccccccCCChhHHHHHHH
Q 041450 566 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPAL---KRADIGIAVA-------DATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 566 ~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aL---k~AdVGIamg-------~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
..|.+|...+..+++.++.|+|+|||+||+||+ +.||+||+|| ++++.+++++||||++|++..++.+|.
T Consensus 214 ~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il 293 (297)
T 4fe3_A 214 HDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSIL 293 (297)
T ss_dssp HHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHH
T ss_pred ccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHH
Confidence 899999999999999999999999999999995 4999999998 799999999999999999999999885
Q ss_pred H
Q 041450 636 T 636 (949)
Q Consensus 636 ~ 636 (949)
.
T Consensus 294 ~ 294 (297)
T 4fe3_A 294 Q 294 (297)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.1e-18 Score=170.03 Aligned_cols=140 Identities=19% Similarity=0.382 Sum_probs=118.3
Q ss_pred cCCCChHHHHHHHHHhc--cccCCChhHHHHHHhccCh--hhhhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCc
Q 041450 352 VKGTDSDGLLLAAARAS--RVENQDAIDASIVGMLADP--KEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGA 427 (949)
Q Consensus 352 ~~~~~~~~~l~~~a~~~--~~~~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa 427 (949)
..|.+.++++.++++++ .....||+|.|++.++... ...+..|+.++.+||+|.+|||++++++++|+..+++|||
T Consensus 10 ~~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGA 89 (170)
T 3gwi_A 10 ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGA 89 (170)
T ss_dssp TTSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCC
Confidence 45788899999999998 4456799999999887532 2345678999999999999999999998888889999999
Q ss_pred hHHHHHhhcC----------chHHHHHHHHHHHHHHHhcCeEEEEEEeecCCcc---ccCCCCCceEEEEEecCCCC
Q 041450 428 PEQIIDLCGL----------KGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKT---KESEGSPWEFVGLLPLFDPP 491 (949)
Q Consensus 428 ~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~---~~~~e~~l~llG~~~i~D~l 491 (949)
||.|+++|+. +++.++.+.+.+++|+++|+|||++|||.++..+ ....|++|+|+|+++|-|.-
T Consensus 90 pE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~~ 166 (170)
T 3gwi_A 90 LQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHH 166 (170)
T ss_dssp HHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC--
T ss_pred cHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhcccccc
Confidence 9999999973 4566788999999999999999999999987643 23569999999999998853
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.35 E-value=6.3e-13 Score=135.80 Aligned_cols=126 Identities=22% Similarity=0.359 Sum_probs=106.7
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHH
Q 041450 498 TIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKK 577 (949)
Q Consensus 498 ~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~ 577 (949)
+|+.|++.|+++.++||+....+..+++++|+.. .|..+ .+|.+.++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~------------------------------~f~~~--~~K~~~~~~ 101 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH------------------------------LFQGR--EDKLVVLDK 101 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE------------------------------EECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH------------------------------HhcCc--CChHHHHHH
Confidence 9999999999999999999999999999999842 12222 667777777
Q ss_pred Hhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCC----hhHHHHHHHHhHHHHHHHHHHHH
Q 041450 578 LQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPG----LSVIVSAVLTSRAIFQRMKNYTI 649 (949)
Q Consensus 578 lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~----l~~i~~~i~~gR~~~~~i~~~~~ 649 (949)
+.++ ...|+|+||+.||++|++.|++|++++++.+.+++.||+++.+++ +..+.+.+..+|..++++++++.
T Consensus 102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~ 181 (189)
T 3mn1_A 102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYL 181 (189)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTS
T ss_pred HHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHh
Confidence 6654 467999999999999999999999999999999999999998764 67788888889999999999988
Q ss_pred HHHHHH
Q 041450 650 YAVSIT 655 (949)
Q Consensus 650 ~~l~~~ 655 (949)
|.+.+|
T Consensus 182 ~~~~~~ 187 (189)
T 3mn1_A 182 EGHHHH 187 (189)
T ss_dssp TTC---
T ss_pred cccccc
Confidence 877665
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.2e-11 Score=137.89 Aligned_cols=156 Identities=13% Similarity=0.128 Sum_probs=108.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
+++|++.+.++.|+++|+++.|+||+....+..+.+++|+.........+..........+ ...+++-.|+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~---------~~~~~kpk~~ 248 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLG---------EVVSAQTKAD 248 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEES---------CCCCHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecc---------cccChhhhHH
Confidence 6899999999999999999999999999999999999998521100000000000000000 0001112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHHHHHHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTI 649 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~ 649 (949)
...++.+.++-....|+|+|||.||++|++.|++|++| ++.+..++.||+++..+++..++.++.......+|++.|+.
T Consensus 249 ~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~~ 327 (335)
T 3n28_A 249 ILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKSK 327 (335)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC--
T ss_pred HHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccccc
Confidence 34444444444456799999999999999999999999 88899999999999999999999999888887888888888
Q ss_pred HHHHHH
Q 041450 650 YAVSIT 655 (949)
Q Consensus 650 ~~l~~~ 655 (949)
+.+.+|
T Consensus 328 ~~~~~~ 333 (335)
T 3n28_A 328 EGHHHH 333 (335)
T ss_dssp ------
T ss_pred cccccc
Confidence 877655
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=1.3e-10 Score=117.44 Aligned_cols=131 Identities=21% Similarity=0.233 Sum_probs=103.5
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhH
Q 041450 492 RHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHK 571 (949)
Q Consensus 492 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK 571 (949)
.+++.++|+.|++.|+++.++||++...+..+.+++|+... |.. ...|
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~------------------------------~~~--~k~k 84 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF------------------------------FLG--KLEK 84 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEE------------------------------EES--CSCH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCcee------------------------------ecC--CCCc
Confidence 34667999999999999999999999999999999998521 221 2456
Q ss_pred HHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHH----HHHHHhHHHHHH
Q 041450 572 YEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIV----SAVLTSRAIFQR 643 (949)
Q Consensus 572 ~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~----~~i~~gR~~~~~ 643 (949)
...++.+.++ | ..|+|+||+.||++|++.|+++++++++.+.+++.||+++.+++...++ +.+...|..+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~ 164 (180)
T 1k1e_A 85 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 164 (180)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhh
Confidence 6666655443 4 5799999999999999999999999988888999999999887655544 444456667888
Q ss_pred HHHHHHHHHHH
Q 041450 644 MKNYTIYAVSI 654 (949)
Q Consensus 644 i~~~~~~~l~~ 654 (949)
++..+.|+.+.
T Consensus 165 ~~~~~~~~~~~ 175 (180)
T 1k1e_A 165 FDTAQGFLKSV 175 (180)
T ss_dssp HHCHHHHHHHG
T ss_pred hhhccchhhhh
Confidence 88777776653
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.10 E-value=1.4e-10 Score=118.45 Aligned_cols=123 Identities=18% Similarity=0.245 Sum_probs=99.7
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEee--ChhhHHHHH
Q 041450 498 TIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGV--FPEHKYEIV 575 (949)
Q Consensus 498 ~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~--sP~qK~~iV 575 (949)
+|+.|++.|+++.++||+....+..+.+++|+.. .|..+ .|+-...+.
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------------------------------~~~~~kpk~~~~~~~~ 103 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------------------------------YYKGQVDKRSAYQHLK 103 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE------------------------------EECSCSSCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc------------------------------ceeCCCChHHHHHHHH
Confidence 4999999999999999999999999999999853 12222 344555556
Q ss_pred HHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCC----hhHHHHHHHHhHHHHHHHHHHHHH
Q 041450 576 KKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPG----LSVIVSAVLTSRAIFQRMKNYTIY 650 (949)
Q Consensus 576 ~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~----l~~i~~~i~~gR~~~~~i~~~~~~ 650 (949)
+.++-....|+|+||+.||++|++.|+++++++++.+.+++.||+++.+++ +..+.+.+...|..|+++.++..|
T Consensus 104 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~ 182 (191)
T 3n1u_A 104 KTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLK 182 (191)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHh
Confidence 655555567999999999999999999999999999999999999998877 555666677777788887776655
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.08 E-value=5e-11 Score=122.24 Aligned_cols=111 Identities=19% Similarity=0.346 Sum_probs=88.1
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHH
Q 041450 497 ETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVK 576 (949)
Q Consensus 497 ~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~ 576 (949)
.+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~------------------------------~~~~~--k~k~~~~~ 106 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL------------------------------IYQGQ--DDKVQAYY 106 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE------------------------------EECSC--SSHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE------------------------------EeeCC--CCcHHHHH
Confidence 45999999999999999999999999999999852 12222 45666666
Q ss_pred HHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhH----HHHHHHHhHH
Q 041450 577 KLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSV----IVSAVLTSRA 639 (949)
Q Consensus 577 ~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~----i~~~i~~gR~ 639 (949)
.+.++ ...|+|+||+.||++|++.|+++++|+++.+.+++.||+++.+++-.. +.+.+...|.
T Consensus 107 ~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~ 177 (195)
T 3n07_A 107 DICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAVREVCDLILQARN 177 (195)
T ss_dssp HHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTT
T ss_pred HHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcc
Confidence 55443 356999999999999999999999999999999999999998776444 4444444443
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.07 E-value=2.9e-10 Score=119.45 Aligned_cols=148 Identities=22% Similarity=0.127 Sum_probs=106.1
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCc-cc--cCCcc-cc-c-------------
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSS-SL--LGQSK-DE-S------------- 547 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~--~~~-~l--~~~~~-~~-~------------- 547 (949)
..++.+++.++|++|++.|+++.++||+....+..+++++|+..... +.. .. .+... .. .
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 34578899999999999999999999999999999999999853111 000 00 11111 00 0
Q ss_pred ----------------------cCCchHHHHhHh--cc-----eEEeeCh--hhHHHHHHHHhhc-C---CEEEEEcCCc
Q 041450 548 ----------------------IASMPVEELIEK--AD-----GFAGVFP--EHKYEIVKKLQER-K---HICGMTGDGV 592 (949)
Q Consensus 548 ----------------------~~~~~~~~~~~~--~~-----v~ar~sP--~qK~~iV~~lq~~-g---~~V~miGDG~ 592 (949)
.+.+.+.++.+. .. .+-.+.| .+|...++.+.++ | ..|+++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 001112222211 11 1234446 6899999888764 2 4689999999
Q ss_pred cCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 593 NDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 593 ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
||.+|++.|++|++|+++.+..++.||+++.+++-+++.++++
T Consensus 180 nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999999999999999999999888888888774
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.8e-10 Score=113.71 Aligned_cols=133 Identities=18% Similarity=0.140 Sum_probs=97.2
Q ss_pred hcCeEEEEEEeec-CCccccCCCCCceEEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHH--HhCCCC
Q 041450 455 RGLRALGVGRQTV-PEKTKESEGSPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGR--RLGMGT 531 (949)
Q Consensus 455 ~GlR~l~~a~~~~-~~~~~~~~e~~l~llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~--~~Gi~~ 531 (949)
++.+.+++-.... .... -....+-+.++.+.++|. .+|+.|++.|+++.++||+ ..+..+++ .+|+.
T Consensus 7 ~~ikliv~D~DGtL~d~~-~~~~~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~- 76 (168)
T 3ewi_A 7 KEIKLLVCNIDGCLTNGH-IYVSGDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK- 76 (168)
T ss_dssp CCCCEEEEECCCCCSCSC-CBCCSSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-
T ss_pred hcCcEEEEeCccceECCc-EEEcCCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-
Confidence 4566666655432 1111 111122256777777776 3899999999999999999 67777888 45542
Q ss_pred CCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEe
Q 041450 532 NMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAV 607 (949)
Q Consensus 532 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIam 607 (949)
+|. .+++|...++.+.++ ...|+|+||+.||++|++.|+++++|
T Consensus 77 ------------------------------~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~ 124 (168)
T 3ewi_A 77 ------------------------------TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVP 124 (168)
T ss_dssp ------------------------------EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEEC
T ss_pred ------------------------------EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEe
Confidence 121 135688888777654 35699999999999999999999999
Q ss_pred ccchHHHHhcccccccCCChhH
Q 041450 608 ADATDAARSASDIVLTEPGLSV 629 (949)
Q Consensus 608 g~g~~~a~~aaDivl~~~~l~~ 629 (949)
+++.+.+++.||+++..++-..
T Consensus 125 ~na~~~~k~~Ad~v~~~~~~~G 146 (168)
T 3ewi_A 125 ADACSGAQKAVGYICKCSGGRG 146 (168)
T ss_dssp TTCCHHHHTTCSEECSSCTTTT
T ss_pred CChhHHHHHhCCEEeCCCCCcc
Confidence 9999999999999998776555
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.7e-10 Score=117.27 Aligned_cols=98 Identities=22% Similarity=0.311 Sum_probs=85.0
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHH
Q 041450 498 TIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKK 577 (949)
Q Consensus 498 ~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~ 577 (949)
+++.|+++|+++.++||+....+..+++++|+.. +|..+ ..|.+.++.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~------------------------------~f~~~--k~K~~~l~~ 131 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH------------------------------LYQGQ--SDKLVAYHE 131 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch------------------------------hhccc--CChHHHHHH
Confidence 9999999999999999999999999999999842 23333 567777777
Q ss_pred Hhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCCh
Q 041450 578 LQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGL 627 (949)
Q Consensus 578 lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l 627 (949)
+.++ ...|+|+||+.||++|++.|+++++++++.+.+++.||+++.+++-
T Consensus 132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~ 185 (211)
T 3ij5_A 132 LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGG 185 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTT
T ss_pred HHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCC
Confidence 7654 5679999999999999999999999998888899999999987753
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.01 E-value=7.4e-10 Score=111.54 Aligned_cols=104 Identities=24% Similarity=0.314 Sum_probs=87.1
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHH
Q 041450 498 TIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKK 577 (949)
Q Consensus 498 ~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~ 577 (949)
+++.|++.|+++.++||+....+..+++++|+. +|+.. ..|.+.++.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-------------------------------~~~~~--~~k~~~l~~ 93 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-------------------------------VLHGI--DRKDLALKQ 93 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------------------------------EEESC--SCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------------------------------eEeCC--CChHHHHHH
Confidence 999999999999999999999999999999984 12222 567777776
Q ss_pred Hhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHH
Q 041450 578 LQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 578 lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
+.++ ...|+|+||+.||++|++.|++|++++++.+.+++.||+++.+++..+++..+
T Consensus 94 ~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 94 WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 6554 35699999999999999999999999989999999999999888855554433
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} | Back alignment and structure |
|---|
Probab=98.95 E-value=2e-10 Score=89.80 Aligned_cols=51 Identities=80% Similarity=1.077 Sum_probs=48.7
Q ss_pred cchhhhHHHHHHHhhhhHHHHHhhhhccccchhhhhhcCCChhhhhhcccC
Q 041450 899 SNRELNELAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 949 (949)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 949 (949)
++.+++++++++++|+|++||||+||+++|++|+++++|.|+++++++|||
T Consensus 2 s~~~~s~~ae~a~~raeiarL~~~~sl~~~~es~~kl~g~dl~~~~~~~tv 52 (52)
T 2o98_P 2 NFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52 (52)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCCCCCCCCCCCC
T ss_pred chhHHHHHHHHhcCcceeeccccchhHHHHHHhhHhhhhhhHhhcccccCC
Confidence 467889999999999999999999999999999999999999999999997
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.9e-09 Score=105.72 Aligned_cols=140 Identities=20% Similarity=0.262 Sum_probs=94.8
Q ss_pred CCCCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccCh-hhhhcCce--EEeeccCCCCCcc
Q 041450 332 KTGTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADP-KEARAGIT--EVHFLPFNPVDKR 408 (949)
Q Consensus 332 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~-~~~~~~~~--~l~~~pF~s~~kr 408 (949)
..||+|.|++.+.++.. ..+.++++++.+++.++.. ++||+++||+..+... ........ ..++.||++..++
T Consensus 13 ~~~tit~gnr~vt~v~~---~~g~~e~elL~lAAs~E~~-SeHPla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~ 88 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIP---AQGVDEKTLADAAQLASLA-DETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 88 (156)
T ss_dssp --------CEEEEEEEE---CTTSCHHHHHHHHHHTTSS-CCSHHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTE
T ss_pred CCCceecCCCeEEEEEe---cCCCCHHHHHHHHHHHhCc-CCCHHHHHHHHHHHHhcCCCcccccccccceeeccccCCC
Confidence 47999999999998763 3467899999998888754 4599999999887532 11010110 1235789888876
Q ss_pred EEEEEEcCCCcEEEEecCchHHHHHhhcCch-HHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEec
Q 041450 409 TAITYIDSNGDWHRTSKGAPEQIIDLCGLKG-EMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPL 487 (949)
Q Consensus 409 ~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i 487 (949)
..+.+ +| ..+.+|+++.|.+++.... ..+..+.+.+++++++|.+++++|... +++|++++
T Consensus 89 ~Gv~v---~G--~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-------------~l~GvIal 150 (156)
T 1svj_A 89 SGINI---DN--RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIAL 150 (156)
T ss_dssp EEEEE---TT--EEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CeEEE---CC--EEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-------------EEEEEEEE
Confidence 66643 66 4688999887766664211 223346777889999999999999743 89999999
Q ss_pred CCCCCc
Q 041450 488 FDPPRH 493 (949)
Q Consensus 488 ~D~lr~ 493 (949)
.|++||
T Consensus 151 aD~iK~ 156 (156)
T 1svj_A 151 KDIVKG 156 (156)
T ss_dssp EECCCC
T ss_pred ecCCCC
Confidence 999996
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=2.7e-09 Score=105.63 Aligned_cols=100 Identities=29% Similarity=0.324 Sum_probs=82.2
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHH
Q 041450 498 TIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKK 577 (949)
Q Consensus 498 ~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~ 577 (949)
+++.|++.|+++.++||+....+..+.+++|+... |... ..|.+.++.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~------------------------------~~~~--kpk~~~~~~ 86 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL------------------------------FQGV--VDKLSAAEE 86 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE------------------------------ECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe------------------------------eccc--CChHHHHHH
Confidence 89999999999999999999999999999998521 2222 345555544
Q ss_pred Hhh----cCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhH
Q 041450 578 LQE----RKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSV 629 (949)
Q Consensus 578 lq~----~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~ 629 (949)
+.+ ....|+|+||+.||++|++.|+++++++++.+.+++.||+++.+++...
T Consensus 87 ~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g 142 (164)
T 3e8m_A 87 LCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEG 142 (164)
T ss_dssp HHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTT
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCc
Confidence 433 2457999999999999999999999999999999999999999888444
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* 4dx0_P* | Back alignment and structure |
|---|
Probab=98.83 E-value=4.1e-10 Score=75.07 Aligned_cols=30 Identities=87% Similarity=1.236 Sum_probs=29.3
Q ss_pred HhhhhccccchhhhhhcCCChhhhhhcccC
Q 041450 920 RELHTLKGHVESVVKLKGLDIETIQQHYTV 949 (949)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 949 (949)
||+||++||+||++|+||+|+|+|||||||
T Consensus 2 rElhTLkghvESv~KLKglDi~~i~~~yTV 31 (31)
T 3m50_P 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31 (31)
T ss_dssp HHHHCHHHHHHHHHHHTTCCSCCCCCCCCC
T ss_pred chhhHHHHHHHHHHHHhcCChhhhhhcccC
Confidence 799999999999999999999999999997
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.80 E-value=8.2e-09 Score=118.51 Aligned_cols=137 Identities=20% Similarity=0.214 Sum_probs=107.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe----
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG---- 565 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar---- 565 (949)
++.||+.+.++.|++.|+++.++||.....+..+.+++|+.........+... .+.++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg------------------~~tg~~~~~ 317 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG------------------TLTGRVVGP 317 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT------------------EEEEEECSS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC------------------EEEeeEccC
Confidence 68999999999999999999999999999999999999985311000000000 01111
Q ss_pred -eChhhHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHhHHH
Q 041450 566 -VFPEHKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAI 640 (949)
Q Consensus 566 -~sP~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR~~ 640 (949)
..++.|.++++.+.++ | ..|.|+|||.||.+|++.|++|+++ ++.+..++.||+++..+++..++.++..+|.-
T Consensus 318 v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 318 IIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 1266787777766553 3 4699999999999999999999999 67788888999999999999999999888887
Q ss_pred HHHHH
Q 041450 641 FQRMK 645 (949)
Q Consensus 641 ~~~i~ 645 (949)
+...-
T Consensus 397 ~~~~~ 401 (415)
T 3p96_A 397 IEAAD 401 (415)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 66543
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.76 E-value=8.4e-10 Score=122.86 Aligned_cols=152 Identities=14% Similarity=0.154 Sum_probs=101.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCcc--------------ccccCC---ch
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSK--------------DESIAS---MP 552 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~--------------~~~~~~---~~ 552 (949)
++++++.+.++.|++ |+.+.++|||....+..+.+.+|+..... ...+..... +..+.. +.
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELH-GTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEE-EEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhc-ccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 478999999999999 99999999999777777777777732110 000000000 000000 01
Q ss_pred HHHHhHh----c--ceEE---e-eChhhHHHHHHHHhhcC--CEEEEEcCCccCHHhhhcC----CceeEeccchHHHHh
Q 041450 553 VEELIEK----A--DGFA---G-VFPEHKYEIVKKLQERK--HICGMTGDGVNDAPALKRA----DIGIAVADATDAARS 616 (949)
Q Consensus 553 ~~~~~~~----~--~v~a---r-~sP~qK~~iV~~lq~~g--~~V~miGDG~ND~~aLk~A----dVGIamg~g~~~a~~ 616 (949)
+ +.+.+ . ..+. - ..+.+|...++.++... +.|+++|||.||++|++.| ++|||| ++.+.+++
T Consensus 181 l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~ 258 (332)
T 1y8a_A 181 F-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALK 258 (332)
T ss_dssp H-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHT
T ss_pred H-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHh
Confidence 1 10000 0 1111 1 12567988888776543 5699999999999999999 999999 99999999
Q ss_pred cccccccCCChhHHHHHH----HHhHHHHHHHHH
Q 041450 617 ASDIVLTEPGLSVIVSAV----LTSRAIFQRMKN 646 (949)
Q Consensus 617 aaDivl~~~~l~~i~~~i----~~gR~~~~~i~~ 646 (949)
.||+++.+++.+.+..++ ..||..+ ++-+
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~ 291 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIELFMERKERAF-EVLS 291 (332)
T ss_dssp TCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGG
T ss_pred hCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHH
Confidence 999999988887776654 4577666 4444
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.75 E-value=2.6e-08 Score=107.35 Aligned_cols=72 Identities=24% Similarity=0.335 Sum_probs=60.7
Q ss_pred eeChh--hHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHH
Q 041450 565 GVFPE--HKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 565 r~sP~--qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~ 636 (949)
.+.|. .|...++.+.++ ...|+++||+.||.+|++.|++|+||+++.+.++++||+|+.+++-+++..+|+.
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 44554 677777776653 2359999999999999999999999999999999999999998888888887743
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.73 E-value=1.4e-08 Score=104.59 Aligned_cols=129 Identities=22% Similarity=0.262 Sum_probs=95.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcce---EEe
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADG---FAG 565 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v---~ar 565 (949)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..+... + ..+ ++.
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~--~~~~~~--~--------------~~~~~~~~~ 135 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFS--NTLIVE--N--------------DALNGLVTG 135 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE--EEEEEE--T--------------TEEEEEEEE
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhcc--ceeEEe--C--------------CEEEeeecc
Confidence 4589999999999999999999999999999999999999853110 000000 0 000 010
Q ss_pred --eChhhHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHH
Q 041450 566 --VFPEHKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 566 --~sP~qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~ 636 (949)
..+..|.+.++.+.++ ...|+|+||+.||++|++.|+++++| ++.+..++.||+++.++++..+..++++
T Consensus 136 ~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 136 HMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp SCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred CCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 1245666666665443 35689999999999999999999999 7778888999999999999998877744
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.65 E-value=1.3e-07 Score=102.60 Aligned_cols=68 Identities=15% Similarity=0.148 Sum_probs=58.7
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHH
Q 041450 569 EHKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 569 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~ 636 (949)
..|...++.+.++ | ..|+++||+.||.+|++.|++|+||+++.+..++.||+++.+++-+++..+|+.
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 4588777777654 2 358999999999999999999999999999999999999988888888888853
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.65 E-value=2.6e-08 Score=109.99 Aligned_cols=132 Identities=17% Similarity=0.191 Sum_probs=94.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.+.++.|++.|+++.++||.....+..+.+++|+...........+........ ..-..++
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~-------------~~~~~~k 245 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNIT-------------LPIMNAA 245 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEEEC-------------SSCCCHH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEe-------------cccCCCC
Confidence 488999999999999999999999999999999999999853211000000000000000 0001345
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
.|.++++.+.++ ...|+|+||+.||++|++.|++|+++ ++.+..++.||.++..+++..++.+++
T Consensus 246 pkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 246 NKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 666666555432 35699999999999999999999999 567777889999998889988877653
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=5e-08 Score=99.11 Aligned_cols=105 Identities=26% Similarity=0.345 Sum_probs=83.0
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHHH
Q 041450 498 TIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKK 577 (949)
Q Consensus 498 ~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~ 577 (949)
+++.|++.|+++.++||+....+..+.+++|+... |.. ...|...++.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~------------------------------~~~--~kpk~~~~~~ 108 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL------------------------------YQG--QSNKLIAFSD 108 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE------------------------------ECS--CSCSHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee------------------------------ecC--CCCCHHHHHH
Confidence 89999999999999999999999999999998521 211 1334555555
Q ss_pred Hhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHH-HHH
Q 041450 578 LQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIV-SAV 634 (949)
Q Consensus 578 lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~-~~i 634 (949)
+.++ | ..|+|+||+.||++|++.|+++++++++.+.+++.||+++.+++-..++ +++
T Consensus 109 ~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l 170 (188)
T 2r8e_A 109 LLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 170 (188)
T ss_dssp HHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHH
Confidence 4432 3 5699999999999999999999999877777788999999887655555 444
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.62 E-value=5.5e-08 Score=104.81 Aligned_cols=66 Identities=23% Similarity=0.269 Sum_probs=47.1
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
.|..-++.+.++ | ..|+++||+.||.+|++.|++|+||++|.+..+++||+|+.+++-+++..+|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHH
Confidence 488877776654 2 45999999999999999999999999999999999999998888888887763
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.59 E-value=1.5e-08 Score=102.54 Aligned_cols=119 Identities=22% Similarity=0.248 Sum_probs=89.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
+++|++.+.++.|++.|+++.++|++....+..+ +.+|+... .......... ..-....|.
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~-----------------~~~~~~~~~ 139 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFEDGK-----------------FQGIRLRFR 139 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEETTE-----------------EEEEECCSS
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeCCc-----------------eECCcCCcc
Confidence 7899999999999999999999999988887777 77776321 0000000000 000345678
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
+|...++.+ ....|.|+||+.||.+|++.|++|++|+++.+ .||+++ +++..+...++
T Consensus 140 ~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~--~~~~el~~~l~ 197 (201)
T 4ap9_A 140 DKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLV--KDLKELVDFIK 197 (201)
T ss_dssp CHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEE--SSHHHHHHHHH
T ss_pred CHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEE--ccHHHHHHHHH
Confidence 899999988 45678899999999999999999999997665 789988 45666666553
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=6.2e-08 Score=98.83 Aligned_cols=128 Identities=23% Similarity=0.318 Sum_probs=88.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe-eCh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG-VFP 568 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar-~sP 568 (949)
++.+++.++++.|++.|+++.++||+....+..+.+.+|+.... ....... +...+ ..+... +.+
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~----------~~~~~~~~~~ 141 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAF-ANRLIVK---DGKLT----------GDVEGEVLKE 141 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEE-EEEEEEE---TTEEE----------EEEECSSCST
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEE-EeeeEEE---CCEEc----------CCcccCccCC
Confidence 46789999999999999999999999988888888888874210 0000000 00000 000000 224
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHH
Q 041450 569 EHKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVS 632 (949)
Q Consensus 569 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~ 632 (949)
..|.+.++.+.++ | ..|+++||+.||.+|++.|+++++|+ +.+..+..||+++.++++..+..
T Consensus 142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 5777666655442 3 45999999999999999999999998 55666788999998766776643
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.7e-07 Score=92.35 Aligned_cols=111 Identities=20% Similarity=0.259 Sum_probs=85.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh--
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP-- 568 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP-- 568 (949)
..+++.++++.|++.|+++.++||.....+..+.+++|+... |....|
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~------------------------------~~~~kp~~ 86 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEI------------------------------YTGSYKKL 86 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEE------------------------------EECC--CH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhh------------------------------ccCCCCCH
Confidence 346789999999999999999999999999999999998421 211112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHH
Q 041450 569 EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIV 631 (949)
Q Consensus 569 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~ 631 (949)
+--..+.+.+.-....++|+||+.||.+|.+.|++++++.++.+..++.||+++.+.+-..++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 87 EIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 222233343333345699999999999999999999999877787888999999887766665
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.54 E-value=2.1e-07 Score=100.82 Aligned_cols=147 Identities=16% Similarity=0.166 Sum_probs=100.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC----------CCccc-------------cC---C
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMY----------PSSSL-------------LG---Q 542 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~----------~~~~l-------------~~---~ 542 (949)
..+-+.+.++|+++++.|+++.+.||.....+..+.+.+|+..... ....+ .. .
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~ 116 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRN 116 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhh
Confidence 3477899999999999999999999999999999999999852100 00000 00 0
Q ss_pred ccc------------------------------------cc-------------cCCchHHH---HhH-h----cc----
Q 041450 543 SKD------------------------------------ES-------------IASMPVEE---LIE-K----AD---- 561 (949)
Q Consensus 543 ~~~------------------------------------~~-------------~~~~~~~~---~~~-~----~~---- 561 (949)
... .. .+.+...+ .+. . ..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 196 (285)
T 3pgv_A 117 DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFS 196 (285)
T ss_dssp CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEES
T ss_pred cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 000 00 00011111 111 1 11
Q ss_pred --eEEeeCh--hhHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccc--cccCCChhHHH
Q 041450 562 --GFAGVFP--EHKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDI--VLTEPGLSVIV 631 (949)
Q Consensus 562 --v~ar~sP--~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDi--vl~~~~l~~i~ 631 (949)
.+..+.| ..|..-++.+.+. | ..|+++||+.||.+|++.|++||||++|.+..|++||+ ++.+++-+++.
T Consensus 197 ~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva 276 (285)
T 3pgv_A 197 TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVP 276 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHH
T ss_pred CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHH
Confidence 1233444 4588888877654 3 35899999999999999999999999999999999995 66677778888
Q ss_pred HHHH
Q 041450 632 SAVL 635 (949)
Q Consensus 632 ~~i~ 635 (949)
.+|+
T Consensus 277 ~~i~ 280 (285)
T 3pgv_A 277 RYLR 280 (285)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7774
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.53 E-value=3.6e-07 Score=97.33 Aligned_cols=66 Identities=24% Similarity=0.287 Sum_probs=56.1
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
.|..-++.+.++ ...|+++||+.||.+|++.|++|+||+++.+..++.||+|+.+++-+++..+++
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 466656666542 345899999999999999999999999999999999999998888889888875
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.52 E-value=2e-07 Score=100.89 Aligned_cols=71 Identities=21% Similarity=0.214 Sum_probs=60.5
Q ss_pred eeChh--hHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 565 GVFPE--HKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 565 r~sP~--qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
.+.|. .|..-++.+.++ | ..|+++||+.||.+|++.|++||||++|.+..++.||+|+.+++-+++..+++
T Consensus 204 ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 204 DCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred EEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 34443 588888877664 3 35999999999999999999999999999999999999999888888888775
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.49 E-value=1.7e-07 Score=100.49 Aligned_cols=67 Identities=24% Similarity=0.288 Sum_probs=58.2
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHH
Q 041450 570 HKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 570 qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~ 636 (949)
.|..-++.+.++ ...|+++||+.||.+|++.|++||+|+++.+..+++||+++.+++-+++..+++.
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 587777766553 3469999999999999999999999999999999999999998888898888753
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.48 E-value=3.7e-07 Score=95.78 Aligned_cols=147 Identities=21% Similarity=0.234 Sum_probs=101.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC-Cc--ccc-CCc------------------c--
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-SS--SLL-GQS------------------K-- 544 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~-~~--~l~-~~~------------------~-- 544 (949)
..+.+.+.++++++++.|+++.++||.....+..+.+.+|+...... .. ... +.. .
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 34678899999999999999999999999999999999997531110 00 000 000 0
Q ss_pred ccc--------------c----CCchHHHHhHh----cceE-----EeeCh--hhHHHHHHHHhhc----CCEEEEEcCC
Q 041450 545 DES--------------I----ASMPVEELIEK----ADGF-----AGVFP--EHKYEIVKKLQER----KHICGMTGDG 591 (949)
Q Consensus 545 ~~~--------------~----~~~~~~~~~~~----~~v~-----ar~sP--~qK~~iV~~lq~~----g~~V~miGDG 591 (949)
... . +.+.+.++.+. .++. ..+.| ..|...++.+.++ ...|+++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 000 0 11122233322 1122 23334 3688888777653 2458999999
Q ss_pred ccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 592 VNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 592 ~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
.||.+|++.|++|++|+++.+..++.||+++.+++-.++.++++
T Consensus 179 ~nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 99999999999999999888888889999998877777777764
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.48 E-value=9.1e-08 Score=102.44 Aligned_cols=68 Identities=28% Similarity=0.335 Sum_probs=59.0
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHH
Q 041450 569 EHKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 569 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~ 636 (949)
..|..-++.+.++ | ..|+++||+.||.+|++.|++|+||+++.+.++++||+|+.+++-+++..++++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 3677777776653 2 358999999999999999999999999999999999999999999999888854
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.40 E-value=3.2e-07 Score=93.75 Aligned_cols=130 Identities=12% Similarity=0.082 Sum_probs=88.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCC-CCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTN-MYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
+++++.+.++.|++.|+++.++|+.....+..+.+.+|+... .+........... .. .......+|.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~ 150 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGS-------FK-----ELDNSNGACD 150 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB-------EE-----EEECTTSTTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCc-------ee-----ccCCCCCCcc
Confidence 789999999999999999999999999999999999998531 1110000000000 00 0011233566
Q ss_pred hHHHHHHHH-hhcCCEEEEEcCCccCHHhhhc--CCceeEe--ccchHHHHhcccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKL-QERKHICGMTGDGVNDAPALKR--ADIGIAV--ADATDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~l-q~~g~~V~miGDG~ND~~aLk~--AdVGIam--g~g~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
.|.+.+... .-....+.|+||+.||.+|++. +.+|+++ +++.+..+..||+++ +++..+..++
T Consensus 151 ~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~--~~~~el~~~l 218 (219)
T 3kd3_A 151 SKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVA--RNVAELASLI 218 (219)
T ss_dssp CHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEE--SSHHHHHHHH
T ss_pred cHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceee--CCHHHHHHhh
Confidence 777777655 4456789999999999999965 2244444 566677788899998 5666665543
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.37 E-value=1.5e-06 Score=88.73 Aligned_cols=128 Identities=16% Similarity=0.151 Sum_probs=93.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+..... .....+.... ....-.-.|+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~-~~~~~~~~~~--------------~~~~~~p~p~ 132 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLC-HKLEIDDSDR--------------VVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEE-EEEEECTTSC--------------EEEEECCSSS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceec-ceeEEcCCce--------------EEeeecCCCc
Confidence 5789999999999999 9999999999999999999999853210 0011100000 0000124688
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
.|...++.+......|+|+||+.||++|.+.|++++++....+....+++++ .-+++..+..++
T Consensus 133 ~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l 196 (206)
T 1rku_A 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFP-AVHTYEDLKREF 196 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSC-EECSHHHHHHHH
T ss_pred hHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECCcHHHHHHHhhhc-cccchHHHHHHH
Confidence 9999999998888899999999999999999999999864444443344543 236787777665
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.35 E-value=1.3e-06 Score=94.43 Aligned_cols=71 Identities=21% Similarity=0.228 Sum_probs=59.3
Q ss_pred eeChh--hHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 565 GVFPE--HKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 565 r~sP~--qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
.+.|. .|...++.+.++ ...|+++||+.||.+|++.|++||+|+++.+..++.||+++.+++-.++..+++
T Consensus 191 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 191 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 34444 788888887653 245899999999999999999999999988888889999998888888887774
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.33 E-value=6.1e-07 Score=98.16 Aligned_cols=67 Identities=25% Similarity=0.237 Sum_probs=58.5
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 569 EHKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 569 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
..|..-++.+.++ | ..|+++||+.||.+|++.|++||||++|.+..+++||+|+.+++-+++..+|+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4688888777654 2 35999999999999999999999999999999999999998888888888875
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.33 E-value=7.8e-07 Score=92.63 Aligned_cols=128 Identities=20% Similarity=0.259 Sum_probs=90.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+.... ...-.|+
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 164 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL--TVIAGDDSVE-----------------RGKPHPD 164 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC--SEEECTTTSS-----------------SCTTSSH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe--eeEEeCCCCC-----------------CCCCCHH
Confidence 46789999999999999999999999999999999999975321 1111110000 0111223
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc---eeEeccc-hHHHHh-cccccccCCChhHHHHHHHHhH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADI---GIAVADA-TDAARS-ASDIVLTEPGLSVIVSAVLTSR 638 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV---GIamg~g-~~~a~~-aaDivl~~~~l~~i~~~i~~gR 638 (949)
--..+.+.+.-....|+|+||+.||+.|++.|++ +|+++.+ .+..++ .||+++ +++..+...++.++
T Consensus 165 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~~ 236 (237)
T 4ex6_A 165 MALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC-
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHccC
Confidence 3334455554445669999999999999999999 8888843 344444 799988 67888888886654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=3.7e-07 Score=93.25 Aligned_cols=129 Identities=13% Similarity=0.122 Sum_probs=91.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.........+ +.... ...-.|+
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~-~~~~~-----------------~~kp~~~ 131 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVL-GRDEA-----------------PPKPHPG 131 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEE-CTTTS-----------------CCTTSSH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEE-eCCCC-----------------CCCCCHH
Confidence 35689999999999999999999999999999999999985321001111 11000 1111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc-eeEeccchHHHHhcccccccCCChhHHHHHHHHhH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADI-GIAVADATDAARSASDIVLTEPGLSVIVSAVLTSR 638 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~gR 638 (949)
--..+.+.+.-....|+|+||+.||..|.+.|++ +|+|+++.+..++.||+++ +++..++..+...+
T Consensus 132 ~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~~ 199 (205)
T 3m9l_A 132 GLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAEG 199 (205)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhcc
Confidence 2233444443334569999999999999999999 9999977766677899988 67888888775543
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.20 E-value=5.3e-06 Score=86.20 Aligned_cols=109 Identities=17% Similarity=0.131 Sum_probs=76.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceE-EeeCh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGF-AGVFP 568 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~-ar~sP 568 (949)
++.|++.+.++.|++.|+++.++||.....+..+.+.+|+..-............. .... ....+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--------------g~~~~~~~~~ 157 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYT--------------GRIEGTPSFR 157 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEE--------------EEEESSCSST
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEe--------------eeecCCCCcc
Confidence 47999999999999999999999999999999999999985211000000000000 0000 11234
Q ss_pred hhHHHHHHHHhh-cC------CEEEEEcCCccCHHhhhcCCceeEeccchH
Q 041450 569 EHKYEIVKKLQE-RK------HICGMTGDGVNDAPALKRADIGIAVADATD 612 (949)
Q Consensus 569 ~qK~~iV~~lq~-~g------~~V~miGDG~ND~~aLk~AdVGIamg~g~~ 612 (949)
..|.+.++.+.+ .| ..|.|+||+.||.+|++.|++++++.....
T Consensus 158 ~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~ 208 (232)
T 3fvv_A 158 EGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPG 208 (232)
T ss_dssp HHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCHH
T ss_pred hHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCHH
Confidence 678777765543 34 579999999999999999999999964443
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.20 E-value=1.8e-06 Score=89.41 Aligned_cols=126 Identities=17% Similarity=0.188 Sum_probs=85.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC-CCCCCccccCCccccccCCchHHHHhHhcceEEe---
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQSKDESIASMPVEELIEKADGFAG--- 565 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar--- 565 (949)
++.||+.++++.|++.|+++.++|+.....+..+.+++|+.. +......... . ...+.+.
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~--~--------------~~~~~~~~~~ 149 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFY--F--------------NGEYAGFDET 149 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEEC--T--------------TSCEEEECTT
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEc--C--------------CCcEecCCCC
Confidence 688999999999999999999999999999999999999853 1110000000 0 0000111
Q ss_pred ---eChhhHHHHHHHHhhc-C-CEEEEEcCCccCHHhhhcCCceeEeccc--hHHHHhcccccccCCChhHHHHH
Q 041450 566 ---VFPEHKYEIVKKLQER-K-HICGMTGDGVNDAPALKRADIGIAVADA--TDAARSASDIVLTEPGLSVIVSA 633 (949)
Q Consensus 566 ---~sP~qK~~iV~~lq~~-g-~~V~miGDG~ND~~aLk~AdVGIamg~g--~~~a~~aaDivl~~~~l~~i~~~ 633 (949)
+.+..|-++++.+.++ | ..++|+||+.||++|.+.|+++|+++.+ .+.....+|+++ +++..+...
T Consensus 150 ~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~ 222 (225)
T 1nnl_A 150 QPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVELLGE 222 (225)
T ss_dssp SGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGGGCC-
T ss_pred CcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeee--cCHHHHHHH
Confidence 1134676666665443 4 5699999999999999999998888732 233445688887 445554433
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.18 E-value=4.8e-07 Score=102.20 Aligned_cols=114 Identities=13% Similarity=0.090 Sum_probs=77.9
Q ss_pred EEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcce
Q 041450 483 GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADG 562 (949)
Q Consensus 483 G~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v 562 (949)
+...-..+++|++.+.|+.|+++|++|+|+||.....+..+|+++|+..++- ...+.|......-++ ..
T Consensus 214 ~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip-~~~Vig~~l~~~~dG----------~~ 282 (385)
T 4gxt_A 214 IKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMK-EEKVLGLRLMKDDEG----------KI 282 (385)
T ss_dssp EEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCC-GGGEEEECEEECTTC----------CE
T ss_pred EeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCC-cceEEEeEEEEecCC----------ce
Confidence 3333345688999999999999999999999999999999999999754322 222222211100000 01
Q ss_pred EEe-------eChhhHHHHHHHHhhc---CCEEEEEcCCccCHHhhhc-CCceeEe
Q 041450 563 FAG-------VFPEHKYEIVKKLQER---KHICGMTGDGVNDAPALKR-ADIGIAV 607 (949)
Q Consensus 563 ~ar-------~sP~qK~~iV~~lq~~---g~~V~miGDG~ND~~aLk~-AdVGIam 607 (949)
-.+ +..+.|...++.+-+. ...++++|||.||.+||++ +|.++++
T Consensus 283 tg~~~~~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 283 LPKFDKDFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp EEEECTTSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred eeeecCccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 111 3457899999876432 1347788999999999986 6776665
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.16 E-value=1.3e-05 Score=87.69 Aligned_cols=66 Identities=27% Similarity=0.310 Sum_probs=56.7
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhccccccc-CCChhHHHHHHH
Q 041450 570 HKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLT-EPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~-~~~l~~i~~~i~ 635 (949)
.|...++.+.+. | ..|+++||+.||.+|++.|++||+|+++.+..++.||+++. +++-+++..+++
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 688777777653 2 35899999999999999999999999998888999999998 888888888774
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.15 E-value=2.3e-06 Score=88.17 Aligned_cols=128 Identities=9% Similarity=0.076 Sum_probs=87.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
-++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..+.+.... ...-.|
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~-----------------~~kp~~ 145 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD--AIVGSSLDG-----------------KLSTKE 145 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEECTTS-----------------SSCSHH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee--eeeccCCCC-----------------CCCCCH
Confidence 3578999999999999999999999999999999999999753210 011000000 000012
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc---eeEeccchH--HHHhcccccccCCChhHHHHHHHHh
Q 041450 569 EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADI---GIAVADATD--AARSASDIVLTEPGLSVIVSAVLTS 637 (949)
Q Consensus 569 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV---GIamg~g~~--~a~~aaDivl~~~~l~~i~~~i~~g 637 (949)
+--..+.+.+.-....|+++||+.||+.|.+.|++ +|++|.+.. ..+..||+++ +++..+..++...
T Consensus 146 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~s~~el~~~~~~~ 217 (226)
T 3mc1_A 146 DVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIV--NSVDELHKKILEL 217 (226)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEE--SSHHHHHHHHHTC
T ss_pred HHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEE--CCHHHHHHHHHHH
Confidence 22223334443334579999999999999999999 888875433 3357899998 5788888777543
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.06 E-value=6.8e-06 Score=87.26 Aligned_cols=126 Identities=13% Similarity=0.128 Sum_probs=83.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.|++.|+++.++|++....+..+.+.+|+..... ...+.+.... ...-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~-----------------~~kp~~~ 164 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP-DFLVTPDDVP-----------------AGRPYPW 164 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC-SCCBCGGGSS-----------------CCTTSSH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccCh-HheecCCccC-----------------CCCCCHH
Confidence 467899999999999999999999999888888888887643210 1111110000 0011233
Q ss_pred hHHHHHHHHhhcC-CEEEEEcCCccCHHhhhcCC---ceeEeccc------------------------hHHHHhc-ccc
Q 041450 570 HKYEIVKKLQERK-HICGMTGDGVNDAPALKRAD---IGIAVADA------------------------TDAARSA-SDI 620 (949)
Q Consensus 570 qK~~iV~~lq~~g-~~V~miGDG~ND~~aLk~Ad---VGIamg~g------------------------~~~a~~a-aDi 620 (949)
--..+.+.+.-.. ..|+++||+.||..|++.|+ ++++++++ .+..++. ||+
T Consensus 165 ~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 244 (267)
T 1swv_A 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 244 (267)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCce
Confidence 3344555554444 57999999999999999999 56666654 2333344 999
Q ss_pred cccCCChhHHHHHHH
Q 041450 621 VLTEPGLSVIVSAVL 635 (949)
Q Consensus 621 vl~~~~l~~i~~~i~ 635 (949)
++ +++..+...+.
T Consensus 245 v~--~~~~el~~~l~ 257 (267)
T 1swv_A 245 TI--ETMQELESVME 257 (267)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred ec--cCHHHHHHHHH
Confidence 88 56777776663
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=7.1e-06 Score=87.38 Aligned_cols=64 Identities=22% Similarity=0.281 Sum_probs=53.6
Q ss_pred hhHHHHHHHHhhc-C-----CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 569 EHKYEIVKKLQER-K-----HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 569 ~qK~~iV~~lq~~-g-----~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
..|...++.+.++ | ..|+++||+.||.+|++.|++|++|+++.+ . +++++..+++-.++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5788888887664 3 679999999999999999999999998887 3 7889888888777777664
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.04 E-value=4.8e-06 Score=85.34 Aligned_cols=121 Identities=16% Similarity=0.179 Sum_probs=81.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.|++.|+++.++|+..........+.+|+.... ...+...... ...-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~-----------------~~kp~~~ 154 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKLP-----------------YSKPHPQ 154 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTSS-----------------CCTTSTH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC--cEEEeccccC-----------------CCCCChH
Confidence 45789999999999999999999999988888888888874311 1111100000 0001123
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEe----ccchHHHHhcccccccCCChhHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAV----ADATDAARSASDIVLTEPGLSVIV 631 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam----g~g~~~a~~aaDivl~~~~l~~i~ 631 (949)
--..+.+.+.-....|+++||+.||.+|++.|++++++ +++.+..+..||+++. ++..+.
T Consensus 155 ~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~--~~~el~ 218 (226)
T 1te2_A 155 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTELT 218 (226)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGGCC
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEEC--CHHHHh
Confidence 33344444443445689999999999999999999998 4444445678999884 444443
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.03 E-value=8e-06 Score=84.63 Aligned_cols=115 Identities=10% Similarity=0.078 Sum_probs=73.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.|++.|+++.++|+... +..+.+.+|+..... ..+.+. .. ....-.|+
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~--~i~~~~---------~~--------~~~Kp~~~ 150 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFH--AIVDPT---------TL--------AKGKPDPD 150 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCS--EECCC--------------------------CC
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcC--EEeeHh---------hC--------CCCCCChH
Confidence 3789999999999999999999999755 677788888753211 111110 00 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCC
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPG 626 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~ 626 (949)
-=..+.+.+.-....|+|+||+.||+.|.+.|++++++.++.+..+ .||+++.+.+
T Consensus 151 ~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s~~ 206 (233)
T 3nas_A 151 IFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQTS 206 (233)
T ss_dssp HHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSSGG
T ss_pred HHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCChH
Confidence 2234555554445679999999999999999999999986666555 8999986443
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.03 E-value=4.6e-06 Score=90.31 Aligned_cols=131 Identities=17% Similarity=0.183 Sum_probs=89.1
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCC---------------------ChHHHHHHHHHhCCCCCCCCCccccCCccccc
Q 041450 490 PPRHDSAETIRRALDL-GVNVKMITGD---------------------QLAIGKETGRRLGMGTNMYPSSSLLGQSKDES 547 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~a-GI~v~mlTGD---------------------~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~ 547 (949)
.+++++.+.++.+++. |+++.+.|.. ....+..+.+..|+...........+..
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---- 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDP---- 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCC----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCC----
Confidence 4678999999999988 9998888876 2333444444445421100000000000
Q ss_pred cCCchHHHHhHhcceEEeeCh--hhHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhccccc
Q 041450 548 IASMPVEELIEKADGFAGVFP--EHKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIV 621 (949)
Q Consensus 548 ~~~~~~~~~~~~~~v~ar~sP--~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDiv 621 (949)
....+....| ..|...++.+.++ | ..|+|+||+.||.+|++.|++|++|+++.+..++.||++
T Consensus 198 -----------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v 266 (289)
T 3gyg_A 198 -----------EDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLI 266 (289)
T ss_dssp -----------TTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCB
T ss_pred -----------CCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEE
Confidence 0012344444 3577777666553 2 458999999999999999999999999999899999999
Q ss_pred ccCCChhHHHHHHH
Q 041450 622 LTEPGLSVIVSAVL 635 (949)
Q Consensus 622 l~~~~l~~i~~~i~ 635 (949)
+.+++-.++.++++
T Consensus 267 ~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 267 TDSEYSKGITNTLK 280 (289)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHH
Confidence 98888888887774
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.99 E-value=4.5e-06 Score=85.45 Aligned_cols=115 Identities=5% Similarity=-0.043 Sum_probs=77.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.|++.|+++.++|++ ..+..+.+.+|+.... ...+.+.... ...-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 149 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF--DAIADPAEVA-----------------ASKPAPD 149 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC--SEECCTTTSS-----------------SCTTSSH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc--ceEeccccCC-----------------CCCCChH
Confidence 46789999999999999999999998 3455667777874211 1111110000 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCC
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPG 626 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~ 626 (949)
--..+.+.+.-....|+++||+.||.+|++.|+++++|.++.+..+ .||+++.+.+
T Consensus 150 ~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~~ 205 (221)
T 2wf7_A 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDTS 205 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSGG
T ss_pred HHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCHH
Confidence 2233444444334569999999999999999999999987777677 8999886543
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.98 E-value=7.1e-06 Score=84.71 Aligned_cols=127 Identities=13% Similarity=0.079 Sum_probs=85.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+.... ...+.+.... ...-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 151 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK--INIVTRDDVS-----------------YGKPDPD 151 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS--SCEECGGGSS-----------------CCTTSTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh--heeeccccCC-----------------CCCCChH
Confidence 46789999999999999999999999999999999999885421 1111110000 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc---eeEec-cchHHHHhc-ccccccCCChhHHHHHHHHh
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADI---GIAVA-DATDAARSA-SDIVLTEPGLSVIVSAVLTS 637 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV---GIamg-~g~~~a~~a-aDivl~~~~l~~i~~~i~~g 637 (949)
--..+.+.+.-....|+++||+.||..|.+.|++ +|++| ++.+..++. ||+++ +++..+...++..
T Consensus 152 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~~ 222 (233)
T 3s6j_A 152 LFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDEI 222 (233)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGGT
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHHH
Confidence 2223333333233569999999999999999999 55555 444444544 89988 6788888777553
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.93 E-value=1.2e-05 Score=84.32 Aligned_cols=138 Identities=14% Similarity=0.054 Sum_probs=89.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHh--cceEEeeC
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEK--ADGFAGVF 567 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~v~ar~s 567 (949)
++.||+.+.++.|+++|+++.++|+.....+..+.+ |+... ..++ +..... .+..+.....+ ...+-+-.
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~---~~v~-~~~~~~--~~~~~~~~~~kp~p~~~~~~~ 148 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK---DRIY-CNHASF--DNDYIHIDWPHSCKGTCSNQC 148 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG---GGEE-EEEEEC--SSSBCEEECTTCCCTTCCSCC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC---CeEE-eeeeEE--cCCceEEecCCCCcccccccc
Confidence 588999999999999999999999999888888777 66321 1111 111000 00000000000 00011112
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhc--ccccccCCChhHHHHHHHHh
Q 041450 568 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSA--SDIVLTEPGLSVIVSAVLTS 637 (949)
Q Consensus 568 P~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~a--aDivl~~~~l~~i~~~i~~g 637 (949)
+.+|..+++.+.-....++|+||+.||++|.+.|++.++.....+..... +|+++ +++..+...+...
T Consensus 149 ~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~~ 218 (236)
T 2fea_A 149 GCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIENV 218 (236)
T ss_dssp SSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHTS
T ss_pred CCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHHh
Confidence 55788999998877789999999999999999999988753222333333 77776 6788888777543
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.91 E-value=2.9e-05 Score=83.59 Aligned_cols=66 Identities=18% Similarity=0.107 Sum_probs=33.6
Q ss_pred hHHHHHHHHhhc-C----CE--EEEEcCCccCHHhhhcCCceeEeccch---HHHHhc--cc-ccccCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQER-K----HI--CGMTGDGVNDAPALKRADIGIAVADAT---DAARSA--SD-IVLTEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~~-g----~~--V~miGDG~ND~~aLk~AdVGIamg~g~---~~a~~a--aD-ivl~~~~l~~i~~~i~ 635 (949)
.|...++.+.+. | .. |+++||+.||.+|++.|++||+|+++. +..++. || +++.+++-+++..+++
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 566666655432 2 34 899999999999999999999999886 555543 78 8888788778777664
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=4.7e-05 Score=76.68 Aligned_cols=136 Identities=12% Similarity=0.123 Sum_probs=82.5
Q ss_pred CCccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccCh-hhh-hcCceEEeeccCCCCCccEEE
Q 041450 334 GTLTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADP-KEA-RAGITEVHFLPFNPVDKRTAI 411 (949)
Q Consensus 334 GTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~-~~~-~~~~~~l~~~pF~s~~kr~sv 411 (949)
||||+|++.|.++.......+.+.++++.+++.++..+. ||++.||+.++... ... .......+..|- +-+..
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~Se-HPlA~AIv~~a~~~~~~~~~~~~~~f~~i~G----~Gv~~ 75 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSE-HPLGTAITKYCKQELDTETLGTCIDFQVVPG----CGISC 75 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSS-CHHHHHHHHHHHHHHTCSCCCCCBCCEEETT----TEEEE
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCC-CHHHHHHHHHHHhhcCCCCCCCccceEEecc----ceEEE
Confidence 899999999998753111124577888888887766655 99999999887421 000 011111122221 11222
Q ss_pred EEEcCCC-----------------------------------------------cEEEEecCchHHHHHhhcCchHHHHH
Q 041450 412 TYIDSNG-----------------------------------------------DWHRTSKGAPEQIIDLCGLKGEMRRK 444 (949)
Q Consensus 412 ~~~~~~g-----------------------------------------------~~~~~~KGa~e~il~~~~~~~~~~~~ 444 (949)
.+...++ +.+.+..|+++.+.+..- .+.+.
T Consensus 76 ~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~i~~~ 152 (185)
T 2kmv_A 76 KVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGL---VINND 152 (185)
T ss_dssp EECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTC---CCCHH
T ss_pred EECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCC---CCCHH
Confidence 2221000 115678899998755221 11223
Q ss_pred HHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCC
Q 041450 445 AHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDP 490 (949)
Q Consensus 445 ~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~ 490 (949)
..+.+.++..+|..++.+|... +++|++++.|+
T Consensus 153 ~~~~~~~~~~~G~T~V~vaidg-------------~l~g~iavaD~ 185 (185)
T 2kmv_A 153 VNDFMTEHERKGRTAVLVAVDD-------------ELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred HHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEEEcC
Confidence 4455667788899999999754 79999999995
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.87 E-value=6.3e-06 Score=84.41 Aligned_cols=123 Identities=14% Similarity=0.071 Sum_probs=77.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhh
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEH 570 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 570 (949)
+.+++.+.++.|++.|+++.++|+..........+.+|+.... ...+...... ...-.|+-
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-----------------~~k~~~~~ 150 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF--DIIIGGEDVT-----------------HHKPDPEG 150 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC--SEEECGGGCS-----------------SCTTSTHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe--eeeeehhhcC-----------------CCCCChHH
Confidence 4689999999999999999999999988888888888874321 1111000000 00001121
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEe----ccchHHHHhc-ccccccCCChhHHHHHH
Q 041450 571 KYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAV----ADATDAARSA-SDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 571 K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam----g~g~~~a~~a-aDivl~~~~l~~i~~~i 634 (949)
-..+.+.+.-....|+++||+.||.+|++.|++++++ +++.+..+.. ||+++. ++..+...+
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 217 (225)
T 3d6j_A 151 LLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIS--TLGQLISVP 217 (225)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEES--SGGGGC---
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEEC--CHHHHHHhh
Confidence 2233344333344688999999999999999998877 3333333444 898874 445554444
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.86 E-value=1.1e-05 Score=84.08 Aligned_cols=124 Identities=12% Similarity=0.059 Sum_probs=82.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..+.+.... ...-.|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~-----------------~~kp~~~ 170 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFK--YIAGSNLDG-----------------TRVNKNE 170 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEECTTS-----------------CCCCHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEE--EEEeccccC-----------------CCCCCHH
Confidence 478999999999999999999999999999999999999853210 011000000 0000111
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCccCHHhhhcCCc---eeEeccch--HHHHhcccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQER-KHICGMTGDGVNDAPALKRADI---GIAVADAT--DAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~-g~~V~miGDG~ND~~aLk~AdV---GIamg~g~--~~a~~aaDivl~~~~l~~i~~~i 634 (949)
--..+.+.+.-. ...|+++||+.||+.|.+.|++ ++++|.+. +..+..+|+++. ++..++..+
T Consensus 171 ~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l 239 (240)
T 3sd7_A 171 VIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE--NVESIKDIL 239 (240)
T ss_dssp HHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred HHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence 112333444334 5568999999999999999999 66666443 333578999884 566665544
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.86 E-value=6.6e-06 Score=86.54 Aligned_cols=121 Identities=19% Similarity=0.145 Sum_probs=81.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+.... ...-.|+
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~Kp~~~ 174 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSLP-----------------EIKPHPA 174 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTSS-----------------SCTTSSH
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE--EEEEecccCC-----------------CCCcCHH
Confidence 57799999999999999999999999999999999999985321 1111111000 0011133
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCcee-Eecc----chHHHHhcccccccCCChhHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGI-AVAD----ATDAARSASDIVLTEPGLSVIV 631 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGI-amg~----g~~~a~~aaDivl~~~~l~~i~ 631 (949)
--..+.+.+.-....|+|+||+.||++|.+.|+++. .+.. +.+..+..+|+++. ++..+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~--~~~el~ 239 (243)
T 2hsz_A 175 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADIL 239 (243)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGG
T ss_pred HHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC--CHHHHH
Confidence 334455555444556999999999999999999984 4432 23334567898873 454443
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.85 E-value=8.5e-06 Score=82.00 Aligned_cols=119 Identities=18% Similarity=0.101 Sum_probs=79.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
.+.+++.+.++.|++.|+++.++|++...... ..+.+|+.... ...+...... ...-.|+
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f--~~~~~~~~~~-----------------~~Kp~~~ 144 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF--TEILTSQSGF-----------------VRKPSPE 144 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE--EEEECGGGCC-----------------CCTTSSH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe--eeEEecCcCC-----------------CCCCCcH
Confidence 36799999999999999999999999988877 77888874211 0001000000 0001122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccchHHHHhcccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADATDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
--..+.+.+.-....|+++||+.||.+|++.|+++ |+|++|. . .||+++ +++..+...+
T Consensus 145 ~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~--~~~~el~~~l 204 (207)
T 2go7_A 145 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRI--QALADISRIF 204 (207)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEEC--SSTTHHHHHT
T ss_pred HHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEe--CCHHHHHHHH
Confidence 22344555544445689999999999999999997 8888665 2 689887 3555555543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.83 E-value=8.6e-06 Score=84.28 Aligned_cols=126 Identities=9% Similarity=0.013 Sum_probs=88.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..+..... ....-.|+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~-----------------~~~kp~~~ 159 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFD--HVLSVDAV-----------------RLYKTAPA 159 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCS--EEEEGGGT-----------------TCCTTSHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcC--EEEEeccc-----------------CCCCcCHH
Confidence 467899999999999999999999999998888888898853211 11110000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEe----ccchHHHHhcccccccCCChhHHHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAV----ADATDAARSASDIVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam----g~g~~~a~~aaDivl~~~~l~~i~~~i~~ 636 (949)
--..+.+.+.-....|+|+||+.||+.|.+.|++++++ +++.+..+..+|+++ +++..+...+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~ 228 (233)
T 3umb_A 160 AYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQA 228 (233)
T ss_dssp HHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHH
Confidence 23344445544445699999999999999999999998 444444456789888 678888877754
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.82 E-value=3.2e-05 Score=82.17 Aligned_cols=126 Identities=13% Similarity=0.110 Sum_probs=83.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ...+.+.... ...-.|+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~-----------------~~kp~~~ 172 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP-ASTVFATDVV-----------------RGRPFPD 172 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC-SEEECGGGSS-----------------SCTTSSH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC-ceEecHHhcC-----------------CCCCCHH
Confidence 477899999999999999999999999988888888888643211 1111100000 0001122
Q ss_pred hHHHHHHHHhhcC-CEEEEEcCCccCHHhhhcCCc---eeEecc------------------------chHHHH-hcccc
Q 041450 570 HKYEIVKKLQERK-HICGMTGDGVNDAPALKRADI---GIAVAD------------------------ATDAAR-SASDI 620 (949)
Q Consensus 570 qK~~iV~~lq~~g-~~V~miGDG~ND~~aLk~AdV---GIamg~------------------------g~~~a~-~aaDi 620 (949)
--..+.+.+.-.. ..|+|+||+.||+.|.+.|++ +|++|. +.+..+ ..+|+
T Consensus 173 ~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~ 252 (277)
T 3iru_A 173 MALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHY 252 (277)
T ss_dssp HHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCE
Confidence 2233444554445 679999999999999999995 566662 223333 34899
Q ss_pred cccCCChhHHHHHHH
Q 041450 621 VLTEPGLSVIVSAVL 635 (949)
Q Consensus 621 vl~~~~l~~i~~~i~ 635 (949)
++ +++..+..++.
T Consensus 253 v~--~~~~el~~~l~ 265 (277)
T 3iru_A 253 VI--DSVADLETVIT 265 (277)
T ss_dssp EE--SSGGGTHHHHH
T ss_pred Ee--cCHHHHHHHHH
Confidence 88 56777777664
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.81 E-value=3.9e-05 Score=79.25 Aligned_cols=120 Identities=13% Similarity=0.089 Sum_probs=75.9
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 491 PRHDSAETIRRALDL-GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 491 lr~~~~~~I~~l~~a-GI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
+.|++.+.++.|++. |+++.++|+.....+....+.+|+.... . ..+.+.. +. ..|.
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~------------------~~--~~~k 151 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADD------------------AL--DRNE 151 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTT------------------CS--SGGG
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc-C-cceecCC------------------Cc--Cccc
Confidence 678999999999999 9999999999998888888888885321 1 1111110 00 0011
Q ss_pred hHHH----HHHHHh--hcCCEEEEEcCCccCHHhhhcCCce---eEeccchHH-HHh-cccccccCCChhHHHHHH
Q 041450 570 HKYE----IVKKLQ--ERKHICGMTGDGVNDAPALKRADIG---IAVADATDA-ARS-ASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~----iV~~lq--~~g~~V~miGDG~ND~~aLk~AdVG---Iamg~g~~~-a~~-aaDivl~~~~l~~i~~~i 634 (949)
-+.. +.+.+. -....|+|+||+.||.+|.+.|+++ ++.+.+... .+. .+|+++.+ +..+...+
T Consensus 152 ~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~--~~el~~~l 225 (234)
T 2hcf_A 152 LPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKN--FAETDEVL 225 (234)
T ss_dssp HHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESC--SCCHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCC--HHhHHHHH
Confidence 1222 233333 2234689999999999999999955 444533332 222 38988743 34444433
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.81 E-value=1.7e-05 Score=82.17 Aligned_cols=124 Identities=17% Similarity=0.114 Sum_probs=84.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+... ....-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~~ 143 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF--DLIVGGDTF-----------------GEKKPSPT 143 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTSS-----------------CTTCCTTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh--eEEEecCcC-----------------CCCCCChH
Confidence 47899999999999999999999999998899999999974311 111111000 00111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccc--hHHHHhcccccccCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADA--TDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g--~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
--..+.+.+.-....|+|+||+.||++|.+.|++. |++..| .... ..+|+++ +++..+...+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~--~~~~el~~~l~ 209 (222)
T 2nyv_A 144 PVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL--SRPSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE--CCHHHHHHHHH
Confidence 34455555544455689999999999999999988 666432 2111 4678877 46777766653
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.79 E-value=2.2e-05 Score=82.03 Aligned_cols=126 Identities=13% Similarity=0.072 Sum_probs=80.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.|++.|+++.++|+.....+...-+. |+.........+.+.... ...-.|+
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~-----------------~~kp~~~ 170 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK-----------------YGKPNPE 170 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS-----------------SCTTSSH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC-----------------CCCCChH
Confidence 5789999999999999999999999887777776666 775321001111111100 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccc----hHHHHhcccccccCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADA----TDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g----~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
--..+.+.+.-....|+++||+.||+.|.+.|+++ |.+..| .+..+..||+++ +++..+...+.
T Consensus 171 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~s~~el~~~l~ 239 (243)
T 3qxg_A 171 PYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLF--PSMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 22334444433345699999999999999999994 555433 222334699988 57777776653
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.78 E-value=2.5e-05 Score=82.58 Aligned_cols=128 Identities=16% Similarity=0.055 Sum_probs=84.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ....+.+.... ....-.|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-~~~i~~~~~~~----------------~~~Kp~~~ 172 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELA-GEHIYDPSWVG----------------GRGKPHPD 172 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHH-CSCEECGGGGT----------------TCCTTSSH
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhc-cceEEeHhhcC----------------cCCCCChH
Confidence 46789999999999999999999999999999999999874210 00011000000 00011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccc-------h-HHHHhcccccccCCChhHHHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADA-------T-DAARSASDIVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g-------~-~~a~~aaDivl~~~~l~~i~~~i~~ 636 (949)
--..+.+.+.-....|+++||+.||+.|.+.|+++ |.+..| . +.....+|+++ +++..+...+..
T Consensus 173 ~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~ 246 (259)
T 4eek_A 173 LYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE 246 (259)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence 22233444433345699999999999999999998 555433 2 33344589988 678888877754
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.77 E-value=1.2e-05 Score=82.93 Aligned_cols=125 Identities=11% Similarity=0.058 Sum_probs=84.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
-++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..+.+... ....-.|
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~-----------------~~~kp~~ 155 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFD--HLISVDEV-----------------RLFKPHQ 155 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCS--EEEEGGGT-----------------TCCTTCH
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcc--eeEehhhc-----------------ccCCCCh
Confidence 3578999999999999999999999999998999999999853210 01100000 0001112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEe----ccchHHHHhcccccccCCChhHHHHHH
Q 041450 569 EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAV----ADATDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 569 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam----g~g~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
+--..+.+.+.-....|.++||+.||+.|.+.|++++++ +++.+..+..+|+++ +++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (230)
T 3um9_A 156 KVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVV--SDVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEE--SSHHHHHHTC
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEe--CCHHHHHHHH
Confidence 222334444443445699999999999999999999998 333333445788887 4666665544
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.77 E-value=2.8e-05 Score=81.11 Aligned_cols=127 Identities=11% Similarity=0.011 Sum_probs=78.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
.++.+++.+.++.|++.|+++.++|+.....+....+. |+.....+...+.+.... ...-.|
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~-----------------~~kp~~ 168 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVK-----------------YGKPNP 168 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCS-----------------SCTTSS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCC-----------------CCCCCC
Confidence 35789999999999999999999999887777776666 775321001111111000 011112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccc--h--HHHHhcccccccCCChhHHHHHHH
Q 041450 569 EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADA--T--DAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 569 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g--~--~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
+--..+.+.+.-....|+|+||+.||+.|.+.|+++ |++..| . +..+..||+++ +++..+..++.
T Consensus 169 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 238 (247)
T 3dv9_A 169 EPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLF--HSMPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 222344444444445699999999999999999975 444432 2 22334799988 56777766653
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.74 E-value=3.6e-05 Score=79.60 Aligned_cols=121 Identities=8% Similarity=0.033 Sum_probs=80.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+.... ...+.+.... ...-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~~~ 163 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF--DSIIGSGDTG-----------------TIKPSPE 163 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEETSSS-----------------CCTTSSH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe--eeEEcccccC-----------------CCCCChH
Confidence 46899999999999999999999999999999999999985321 0011000000 0011122
Q ss_pred hHHHHHHHHhhcCC-EEEEEcCCccCHHhhhcCCc-eeEeccchHHHHhcccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQERKH-ICGMTGDGVNDAPALKRADI-GIAVADATDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~g~-~V~miGDG~ND~~aLk~AdV-GIamg~g~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
--..+.+.+.-... .|+++||+.||+.|.+.|++ +|.++++.+ ..+|+++ +++..+...+
T Consensus 164 ~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l 225 (231)
T 3kzx_A 164 PVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFI 225 (231)
T ss_dssp HHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHH
T ss_pred HHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHH
Confidence 22344455544444 68999999999999999997 677776554 3567666 5677776655
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.73 E-value=5.2e-05 Score=75.47 Aligned_cols=126 Identities=13% Similarity=0.094 Sum_probs=79.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhC--CCCCCCCCccccCCccccccCCch
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQL---------------AIGKETGRRLG--MGTNMYPSSSLLGQSKDESIASMP 552 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~---------------~tA~~ia~~~G--i~~~~~~~~~l~~~~~~~~~~~~~ 552 (949)
++.|++.+++++|++.|+++.++|+... ..+....+++| +..-... ...+.. + .
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--~~~~~~-~-~----- 97 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMC--PHGPDD-G-C----- 97 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEE--CCCTTS-C-C-----
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEc--CCCCCC-C-C-----
Confidence 5789999999999999999999999875 45566667777 3210000 000000 0 0
Q ss_pred HHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc---eeEeccchHHHH----hcccccccCC
Q 041450 553 VEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADI---GIAVADATDAAR----SASDIVLTEP 625 (949)
Q Consensus 553 ~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV---GIamg~g~~~a~----~aaDivl~~~ 625 (949)
.+..-.|+-=..+.+.+.-....++|+||+.||+.|.++|++ +|+.|.+..... ..+|+++ +
T Consensus 98 ---------~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~--~ 166 (179)
T 3l8h_A 98 ---------ACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVC--E 166 (179)
T ss_dssp ---------SSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEE--S
T ss_pred ---------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEe--c
Confidence 000011222223444444445669999999999999999995 555565554443 3578888 5
Q ss_pred ChhHHHHHHH
Q 041450 626 GLSVIVSAVL 635 (949)
Q Consensus 626 ~l~~i~~~i~ 635 (949)
++..+...+.
T Consensus 167 ~l~el~~~l~ 176 (179)
T 3l8h_A 167 DLAAVAEQLL 176 (179)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6777776663
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.72 E-value=4.3e-05 Score=78.92 Aligned_cols=124 Identities=19% Similarity=0.133 Sum_probs=85.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|++. +++.++|+.....+....+.+|+..... ..+.+ ++. ....-.|+
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~--~~~~~------------~~~-----~~~kp~~~ 159 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFD--SITTS------------EEA-----GFFKPHPR 159 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEH------------HHH-----TBCTTSHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcc--eeEec------------ccc-----CCCCcCHH
Confidence 4679999999999999 9999999999998888889988743210 00000 000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCc-cCHHhhhcCC---ceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGV-NDAPALKRAD---IGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~-ND~~aLk~Ad---VGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
--..+.+.+.-....|+++||+. ||+.|.+.|+ ++++++++.+..++.+|+++ +++..+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~--~~~~el~~~l~ 227 (234)
T 3u26_A 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEE--SSTHHHHHHHH
T ss_pred HHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEee--CCHHHHHHHHH
Confidence 23344444443445699999997 9999999999 56777766666666899988 56777776663
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=1.5e-05 Score=85.54 Aligned_cols=128 Identities=9% Similarity=0.005 Sum_probs=81.8
Q ss_pred CCCCcchHHHHHHHHhCCC--eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEee
Q 041450 489 DPPRHDSAETIRRALDLGV--NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGV 566 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI--~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~ 566 (949)
-++.|++.+.++.|++.|+ ++.++|+.....+....+.+|+.... ...+.+...... ...+.-
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~v~~~~~~~~~-------------~~~~Kp 205 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF--DGLTYCDYSRTD-------------TLVCKP 205 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC--SEEECCCCSSCS-------------SCCCTT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc--ceEEEeccCCCc-------------ccCCCc
Confidence 3578999999999999999 99999999999999999999986421 111111000000 000111
Q ss_pred ChhhHHHHHHHHhhcC-CEEEEEcCCccCHHhhhcCCceeEeccchHHH------HhcccccccCCChhHHHHH
Q 041450 567 FPEHKYEIVKKLQERK-HICGMTGDGVNDAPALKRADIGIAVADATDAA------RSASDIVLTEPGLSVIVSA 633 (949)
Q Consensus 567 sP~qK~~iV~~lq~~g-~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a------~~aaDivl~~~~l~~i~~~ 633 (949)
.|+-=..+.+.+.-.. ..|+|+||+.||+.|.+.|++|.+|+.+.... ...||+++ +++..+..+
T Consensus 206 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi--~sl~el~~~ 277 (282)
T 3nuq_A 206 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVI--SDILELPHV 277 (282)
T ss_dssp SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEE--SSGGGGGGT
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEe--CCHHHHHHH
Confidence 1222223333343344 67999999999999999999998886322211 23678877 455555443
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.68 E-value=2.9e-05 Score=80.05 Aligned_cols=123 Identities=9% Similarity=0.095 Sum_probs=79.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC---hHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeC
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQ---LAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVF 567 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~---~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~s 567 (949)
+.+++.+.++.|++.|+++.++|+.. ........+.+|+.... ...+.+ ++. . ...-.
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f--~~~~~~------------~~~-~----~~kp~ 160 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI--DKTFFA------------DEV-L----SYKPR 160 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC--SEEEEH------------HHH-T----CCTTC
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh--hhheec------------ccc-C----CCCCC
Confidence 57999999999999999999999998 88888888888874321 001100 000 0 00011
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCc-cCHHhhhcCCceeEe---ccchHHHHhcccccccCCChhHHHHHH
Q 041450 568 PEHKYEIVKKLQERKHICGMTGDGV-NDAPALKRADIGIAV---ADATDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 568 P~qK~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdVGIam---g~g~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
|+--..+.+.+.-....|+++||+. ||..|++.|++++++ +++.+..+..+|+++ +++..+...+
T Consensus 161 ~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 229 (235)
T 2om6_A 161 KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVI 229 (235)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHH
T ss_pred HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHH
Confidence 2222233333332345699999999 999999999999998 322222233578776 5666666655
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.66 E-value=1.4e-05 Score=80.88 Aligned_cols=120 Identities=14% Similarity=0.049 Sum_probs=80.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+.... ...+.+.... ...-.|+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 149 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF--DIVLSGEEFK-----------------ESKPNPE 149 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGCS-----------------SCTTSSH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe--eeEeeccccc-----------------CCCCChH
Confidence 46889999999999999999999999999999999999985321 0111100000 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEecc-c-hHHHHhcccccccCCChhHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVAD-A-TDAARSASDIVLTEPGLSVI 630 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~-g-~~~a~~aaDivl~~~~l~~i 630 (949)
--..+.+.+.-....|+++||+.||+.|.+.|++++.+.+ + ....+..+|+++. ++..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el 210 (214)
T 3e58_A 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDV 210 (214)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGG
T ss_pred HHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHH
Confidence 2334445554444569999999999999999999888742 2 3333357888873 44443
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.63 E-value=3e-05 Score=83.13 Aligned_cols=67 Identities=21% Similarity=0.243 Sum_probs=57.4
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 569 EHKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 569 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
..|...++.+.++ | ..|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-.++..+++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 4788888877654 3 45899999999999999999999999998888999999998887788887774
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.61 E-value=2.4e-05 Score=82.36 Aligned_cols=68 Identities=12% Similarity=0.232 Sum_probs=55.3
Q ss_pred EEeeChh--hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcC--CceeEeccchHHHHhcccccccC-CChhHHHHHHH
Q 041450 563 FAGVFPE--HKYEIVKKLQERKHICGMTGDGVNDAPALKRA--DIGIAVADATDAARSASDIVLTE-PGLSVIVSAVL 635 (949)
Q Consensus 563 ~ar~sP~--qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~A--dVGIamg~g~~~a~~aaDivl~~-~~l~~i~~~i~ 635 (949)
+-.+.|. .|..-++.+.+.-. |+++||+.||.+||+.| +.||||+++ ++.||+++.+ ++-..+..+++
T Consensus 151 ~lei~~~~~~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 151 IIELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp EEEEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred EEEEEcCCCCHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHH
Confidence 3445554 79999999887633 99999999999999999 999999987 6789998877 66667766663
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=4.8e-05 Score=79.31 Aligned_cols=124 Identities=11% Similarity=0.044 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+.... ...-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 165 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL--DSCLSADDLK-----------------IYKPDPR 165 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGTT-----------------CCTTSHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc--CEEEEccccC-----------------CCCCCHH
Confidence 47899999999999999999999999999888999999985321 0111100000 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEe---ccchHHHHhcc-cccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAV---ADATDAARSAS-DIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam---g~g~~~a~~aa-Divl~~~~l~~i~~~i 634 (949)
--..+.+.+.-....|+++||+.||+.|.+.|++.... +.+.+..+..+ |+++ +++..+...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 232 (240)
T 2no4_A 166 IYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQV--NSLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceee--CCHHHHHHHH
Confidence 33334444443445689999999999999999966443 33222223346 8877 4666666554
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00021 Score=74.43 Aligned_cols=124 Identities=15% Similarity=0.172 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+.... ...+.+.... ...-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 154 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF--EHVIISDFEG-----------------VKKPHPK 154 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTCHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc--cEEEEeCCCC-----------------CCCCCHH
Confidence 36789999999999999999999999988888888899875321 0111100000 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCc-cCHHhhhcCCceeEe---ccchHHHHh---cccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGV-NDAPALKRADIGIAV---ADATDAARS---ASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdVGIam---g~g~~~a~~---aaDivl~~~~l~~i~~~i 634 (949)
-=..+.+.+.-....|+|+||+. ||+.|.+.|+++... +.+...... .+|+++ +++..+...+
T Consensus 155 ~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~l 224 (241)
T 2hoq_A 155 IFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI--DNLESLLEVL 224 (241)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEE--SSTTHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEE--CCHHHHHHHH
Confidence 22233344433345689999998 999999999997554 333333332 688887 4566666655
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.57 E-value=2.7e-05 Score=80.62 Aligned_cols=124 Identities=9% Similarity=0.042 Sum_probs=82.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+... ....-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 155 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPV-----------------QVYKPDNR 155 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGG-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh--heEEEeccc-----------------CCCCCCHH
Confidence 47799999999999999999999999988888888899874321 111111000 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEec----cchHHHHhcccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVA----DATDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg----~g~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
--..+.+.+.-....|+|+||+.||+.|.+.|+++.++- +..+..+..+|+++ +++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 222 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTTC
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 333444555434456899999999999999999998872 22222334678877 4566665444
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.57 E-value=3.9e-05 Score=82.97 Aligned_cols=66 Identities=23% Similarity=0.305 Sum_probs=57.4
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
+|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-+++..+++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 688888777664 246899999999999999999999999988888999999998888888888775
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.55 E-value=3.6e-05 Score=82.36 Aligned_cols=72 Identities=26% Similarity=0.305 Sum_probs=60.0
Q ss_pred EeeChh--hHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 564 AGVFPE--HKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 564 ar~sP~--qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
..+.|. .|...++.+.++ ...|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-.++..+++
T Consensus 182 ~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred EEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 344554 788888877653 245899999999999999999999999988888889999998888888888774
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=5e-05 Score=80.12 Aligned_cols=66 Identities=18% Similarity=0.158 Sum_probs=56.0
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhc-------ccccccCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSA-------SDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~a-------aDivl~~~~l~~i~~~i~ 635 (949)
.|...++.+.+. | ..|+++||+.||.+|++.|++||+|+++.+..++. ||+++.+++-.++..+++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 688877777654 2 35899999999999999999999999998888875 889998888888888774
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00011 Score=78.67 Aligned_cols=113 Identities=14% Similarity=0.003 Sum_probs=75.4
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 491 PRHDSAETIRRALDL-GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 491 lr~~~~~~I~~l~~a-GI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+.. . ...+.+..... ..-.|+
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f-~~i~~~~~~~~-----------------~kp~~~ 174 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--P-EYFITANDVKQ-----------------GKPHPE 174 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--C-SSEECGGGCSS-----------------CTTSSH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--c-CEEEEcccCCC-----------------CCCChH
Confidence 578999999999999 99999999999988888888888752 1 11111111000 001122
Q ss_pred hHHHHHHHHhh-------cCCEEEEEcCCccCHHhhhcCCceeEe---ccchHHHH-hccccccc
Q 041450 570 HKYEIVKKLQE-------RKHICGMTGDGVNDAPALKRADIGIAV---ADATDAAR-SASDIVLT 623 (949)
Q Consensus 570 qK~~iV~~lq~-------~g~~V~miGDG~ND~~aLk~AdVGIam---g~g~~~a~-~aaDivl~ 623 (949)
--..+.+.+.- ....|+++||+.||..|++.|++++++ +.+.+..+ ..||+++.
T Consensus 175 ~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~ 239 (275)
T 2qlt_A 175 PYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVK 239 (275)
T ss_dssp HHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEES
T ss_pred HHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC
Confidence 22334444443 445699999999999999999977665 43333333 35888874
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.47 E-value=8.3e-05 Score=76.28 Aligned_cols=114 Identities=11% Similarity=-0.032 Sum_probs=77.9
Q ss_pred CCCcchHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 490 PPRHDSAETIRRALDLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aG-I~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
++.+++.+.++.|++.| +++.++|+..........+.+|+..... .+++.-.|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~--------------------------~~~~~~kp 158 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD--------------------------HIEVMSDK 158 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS--------------------------EEEEESCC
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh--------------------------eeeecCCC
Confidence 46789999999999999 9999999998888888888888743110 11222222
Q ss_pred hhHHHHHHHHhh----cCCEEEEEcCCc-cCHHhhhcCCceeEe-------ccchHHHHhcc-cccccCCChhHHHHH
Q 041450 569 EHKYEIVKKLQE----RKHICGMTGDGV-NDAPALKRADIGIAV-------ADATDAARSAS-DIVLTEPGLSVIVSA 633 (949)
Q Consensus 569 ~qK~~iV~~lq~----~g~~V~miGDG~-ND~~aLk~AdVGIam-------g~g~~~a~~aa-Divl~~~~l~~i~~~ 633 (949)
|...++.+.+ ....|+++||+. ||+.|.+.|+++.++ +.+.......+ |+++ +++..++.+
T Consensus 159 --k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~ 232 (234)
T 3ddh_A 159 --TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSL 232 (234)
T ss_dssp --SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHH
T ss_pred --CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHh
Confidence 4444443332 345699999996 999999999998876 22332223334 8877 566666654
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00013 Score=75.05 Aligned_cols=122 Identities=9% Similarity=0.055 Sum_probs=76.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEE--eeC
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFA--GVF 567 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a--r~s 567 (949)
++.+++.+.++.++. ++.++|+........+.+++|+.... +...+.+ +.. . .. .-.
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~-~~~~~~~------------~~~-~----~~~~kpk 145 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYF-APHIYSA------------KDL-G----ADRVKPK 145 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGT-TTCEEEH------------HHH-C----TTCCTTS
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhc-cceEEec------------ccc-c----cCCCCcC
Confidence 456788888888774 99999999998888888888874211 0011100 000 0 00 001
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccchH-------HHHhc-ccccccCCChhHHHHHH
Q 041450 568 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADATD-------AARSA-SDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 568 P~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~~-------~a~~a-aDivl~~~~l~~i~~~i 634 (949)
|+--..+.+.+.-....|+++||+.||.+|++.|+++ |+++.+.+ ..++. ||+++ +++..+...+
T Consensus 146 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l 219 (229)
T 2fdr_A 146 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVI 219 (229)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHH
T ss_pred HHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceee--cCHHHHHHHH
Confidence 1222233444433345689999999999999999998 77764432 35555 99988 4566666554
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00018 Score=71.59 Aligned_cols=105 Identities=13% Similarity=0.019 Sum_probs=68.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeC--h
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVF--P 568 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~s--P 568 (949)
+.+++.+.++.|++.|+++.++|++.. .+....+.+|+.... ...+.+.. +.... |
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f--~~~~~~~~-------------------~~~~kp~~ 140 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF--TEVVTSSS-------------------GFKRKPNP 140 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE--EEEECGGG-------------------CCCCTTSC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe--eeeeeccc-------------------cCCCCCCH
Confidence 678999999999999999999998864 566777778874211 00000000 01111 2
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhccc
Q 041450 569 EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASD 619 (949)
Q Consensus 569 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaD 619 (949)
+--..+.+.+.-. .|+++||+.||.+|++.|++++++.+.....++..+
T Consensus 141 ~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 141 ESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 2222333333322 689999999999999999999888655444554444
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00024 Score=71.44 Aligned_cols=90 Identities=12% Similarity=0.119 Sum_probs=66.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC-hHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe--e
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG--V 566 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~-~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar--~ 566 (949)
++.|++.+++++|++.|+++.++||.. ...+..+.+.+|+... |.. +
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~------------------------------f~~~~~ 117 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRY------------------------------FVHREI 117 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTT------------------------------EEEEEE
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhh------------------------------cceeEE
Confidence 578999999999999999999999998 6889999999998532 111 1
Q ss_pred ChhhHHHHH----HHHhhcCCEEEEEcCCccCHHhhhcCCce-eEecc
Q 041450 567 FPEHKYEIV----KKLQERKHICGMTGDGVNDAPALKRADIG-IAVAD 609 (949)
Q Consensus 567 sP~qK~~iV----~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~ 609 (949)
.+..|.+.. +.+.-....++|+||+.||+.+.++|++. |.+..
T Consensus 118 ~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~ 165 (187)
T 2wm8_A 118 YPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQN 165 (187)
T ss_dssp SSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSS
T ss_pred EeCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECC
Confidence 222333333 33322334689999999999999999985 34443
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00022 Score=74.50 Aligned_cols=122 Identities=16% Similarity=0.176 Sum_probs=77.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhh
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEH 570 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 570 (949)
+.|++.+.++.|++.|+++.++|+.....+..+-+++|+. .. . ..+.+.... ...-.|+-
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f-~-~~~~~~~~~-----------------~~Kp~p~~ 170 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SF-D-FALGEKSGI-----------------RRKPAPDM 170 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TC-S-EEEEECTTS-----------------CCTTSSHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ce-e-EEEecCCCC-----------------CCCCCHHH
Confidence 5689999999999999999999999888888888888874 21 1 111111000 00001111
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEe--ccch-H-HHHhcccccccCCChhHHHHHH
Q 041450 571 KYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAV--ADAT-D-AARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 571 K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iam--g~g~-~-~a~~aaDivl~~~~l~~i~~~i 634 (949)
=..+.+.+.-....|+|+||+.||+.|.+.|++. |++ +.+. + .....+|+++ +++..+...+
T Consensus 171 ~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~--~~~~el~~~l 237 (240)
T 2hi0_A 171 TSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIV--DTAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEE--CSHHHHHHHH
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEE--CCHHHHHHHh
Confidence 1223333333345699999999999999999994 344 4322 3 3333688887 4566665544
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.40 E-value=2.2e-05 Score=79.91 Aligned_cols=118 Identities=10% Similarity=0.039 Sum_probs=76.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.... ...+.+... ....-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~KP~~~ 142 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDT-----------------PKRKPDPL 142 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGS-----------------SCCTTSSH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc--cEEEecCcC-----------------CCCCCCcH
Confidence 4689999999999999 999999999988888888888764211 000000000 00000122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEecc----chHHHHhcccccccCCChhHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVAD----ATDAARSASDIVLTEPGLSVI 630 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~----g~~~a~~aaDivl~~~~l~~i 630 (949)
--..+.+.+.-....|+++||+.||.+|.+.|++++++.+ +.+..++ +|+++. ++..+
T Consensus 143 ~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el 204 (209)
T 2hdo_A 143 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDI 204 (209)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGG
T ss_pred HHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHH
Confidence 2234444444344569999999999999999999988742 2333333 888874 44444
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00032 Score=72.05 Aligned_cols=135 Identities=16% Similarity=0.121 Sum_probs=80.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC---------------hHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHH
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVE 554 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~---------------~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 554 (949)
++.|++.+++++|++.|+++.++|+.. ...+..+.+++|+.- ..........+. ....
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---~~~~~~~~~~~~-~~~~--- 122 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL---DGIYYCPHHPQG-SVEE--- 122 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC---SEEEEECCBTTC-SSGG---
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCce---EEEEECCcCCCC-cccc---
Confidence 678999999999999999999999998 466777888888741 100000000000 0000
Q ss_pred HHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce--eEeccc---hHHHHhcccccccCCChhH
Q 041450 555 ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG--IAVADA---TDAARSASDIVLTEPGLSV 629 (949)
Q Consensus 555 ~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG--Iamg~g---~~~a~~aaDivl~~~~l~~ 629 (949)
. .....+..-.|+--..+.+.+.-....++|+||+.||+.+.+.|++. |.+..| .+.....+|+++ +++..
T Consensus 123 -~-~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~e 198 (211)
T 2gmw_A 123 -F-RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLAD 198 (211)
T ss_dssp -G-BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGG
T ss_pred -c-CccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHHH
Confidence 0 00000111122222334444443345689999999999999999974 444322 233334689887 56777
Q ss_pred HHHHHH
Q 041450 630 IVSAVL 635 (949)
Q Consensus 630 i~~~i~ 635 (949)
+..++.
T Consensus 199 l~~~l~ 204 (211)
T 2gmw_A 199 LPQAIK 204 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776653
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00016 Score=74.69 Aligned_cols=123 Identities=12% Similarity=0.073 Sum_probs=80.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|+ .|+++.++|+.....+...-+.+|+.... ...+.+.... ...-.|+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 166 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF--KKIILSEDLG-----------------VLKPRPE 166 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGTT-----------------CCTTSHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc--eeEEEeccCC-----------------CCCCCHH
Confidence 46789999999999 99999999999988888888888875321 0111000000 0001112
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCc-cCHHhhhcCCceeEeccchH--HHHhcccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGV-NDAPALKRADIGIAVADATD--AARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdVGIamg~g~~--~a~~aaDivl~~~~l~~i~~~i 634 (949)
--..+.+.+.-....|+++||+. ||+.|.+.|++++++.+... .....+|+++ +++..+..+.
T Consensus 167 ~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi--~sl~e~~~~~ 232 (240)
T 3qnm_A 167 IFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHI--HSLKELMNLL 232 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEE--SSTHHHHHHT
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEE--CCHHHHHHHH
Confidence 22223333332345699999995 99999999999999963222 3445788888 4566655543
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00019 Score=74.71 Aligned_cols=121 Identities=9% Similarity=0.036 Sum_probs=81.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.|++. +++.++|+........+.+.+|+.-+ ..+.+ +. +....|.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~----~~~~~------------~~-------~~~~kp~ 171 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD----VIIGS------------DI-------NRKYKPD 171 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS----CCCCH------------HH-------HTCCTTS
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee----EEEEc------------Cc-------CCCCCCC
Confidence 5678999999999997 99999999999999999999998411 01100 00 0011121
Q ss_pred --hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchH---------H-HHhcccccccCCChhHHHHHHHH
Q 041450 570 --HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATD---------A-ARSASDIVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 570 --qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~---------~-a~~aaDivl~~~~l~~i~~~i~~ 636 (949)
-=..+.+.+.-....|+++||+.||+.|.+.|++++++.+... . .+..+|+++ +++..+..++..
T Consensus 172 ~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 172 PQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 1112222222233569999999999999999999999863111 1 245688888 678888877754
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00013 Score=76.29 Aligned_cols=121 Identities=12% Similarity=0.084 Sum_probs=81.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.|++. +++.++|+........+.+.+|+.-+ ..+.. +... ...-.|+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f~----~~~~~-------------~~~~----~~kp~~~ 177 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPWD----MLLCA-------------DLFG----HYKPDPQ 177 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCCS----EECCH-------------HHHT----CCTTSHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCcc----eEEee-------------cccc----cCCCCHH
Confidence 4678999999999985 99999999999888888899987411 01100 0000 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEecc-----ch---HH--HHhcccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVAD-----AT---DA--ARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~-----g~---~~--a~~aaDivl~~~~l~~i~~~i 634 (949)
--..+.+.+.-....|+++||+.||+.|.+.|+++++|.+ |. +. .+..+|+++ +++..+..++
T Consensus 178 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l 250 (254)
T 3umc_A 178 VYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQL 250 (254)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHh
Confidence 2223344443334569999999999999999999999964 22 11 245788888 6777777766
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00014 Score=76.48 Aligned_cols=100 Identities=10% Similarity=0.069 Sum_probs=68.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|+ |+++.++|+.....+..+.+.+|+.... ...+.+.... ...-.|+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~Kp~~~ 151 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAKR-----------------VFKPHPD 151 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc--cEEEEccccC-----------------CCCCCHH
Confidence 57899999999999 9999999999999899999999874321 1111100000 1111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccc
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADA 610 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g 610 (949)
--..+.+.+.-....|+|+||+.||+.|.+.|+++.++.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~ 192 (253)
T 1qq5_A 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVAR 192 (253)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECC
Confidence 33344444443345689999999999999999999887643
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00015 Score=73.41 Aligned_cols=120 Identities=10% Similarity=0.086 Sum_probs=79.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+ ++.|++. +++.++|+.....+..+.+.+|+.... ...+.+... ....-.|+
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 132 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF--KGIFSAESV-----------------KEYKPSPK 132 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTCHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC--cEEEehhhc-----------------CCCCCCHH
Confidence 46789999 9999999 999999999988888888999974321 011111000 00111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEe-c---cchHHHHhcccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAV-A---DATDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam-g---~g~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
--..+.+.+. ...++|+||+.||+.|.+.|+++..+ . ++.+.....+|+++ +++..+...+
T Consensus 133 ~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 197 (201)
T 2w43_A 133 VYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIV--NDFKELYEWI 197 (201)
T ss_dssp HHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 3344555555 45688999999999999999999776 2 22222233578776 4566666554
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00014 Score=74.28 Aligned_cols=115 Identities=10% Similarity=0.083 Sum_probs=76.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.+.++.|++ |+++.++|+.....+...-+++|+.... ...+ .+.-.+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f--~~i~-----------------------~~~~~~K 137 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF--DGIY-----------------------GSSPEAP 137 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC--SEEE-----------------------EECSSCC
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe--eeee-----------------------cCCCCCC
Confidence 467899999999999 9999999999888888888888885321 0011 1111112
Q ss_pred hHHHHHHH-Hhhc---CCEEEEEcCCccCHHhhhcCCc---eeEeccc-hHHHH-hcccccccCCChhHHHH
Q 041450 570 HKYEIVKK-LQER---KHICGMTGDGVNDAPALKRADI---GIAVADA-TDAAR-SASDIVLTEPGLSVIVS 632 (949)
Q Consensus 570 qK~~iV~~-lq~~---g~~V~miGDG~ND~~aLk~AdV---GIamg~g-~~~a~-~aaDivl~~~~l~~i~~ 632 (949)
-|.++.+. +++. ...|+|+||+.||+.|.++|++ +++++.+ .+..+ ..+|+++. ++..+..
T Consensus 138 p~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~--~~~el~~ 207 (210)
T 2ah5_A 138 HKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLA 207 (210)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHH
T ss_pred CChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHH
Confidence 23333333 2332 3459999999999999999999 6666644 33333 35898874 4555543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00012 Score=77.67 Aligned_cols=67 Identities=25% Similarity=0.306 Sum_probs=54.8
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 569 EHKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 569 ~qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
..|...++.+.++ ...|+++||+.||.+|++.|++|++|+++.+..+..||+++.+++-+++..+++
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 3677777666543 346899999999999999999999999888888899999997776667877764
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00022 Score=73.55 Aligned_cols=124 Identities=9% Similarity=0.054 Sum_probs=80.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|++. +++.++|+.....+...-+.+|+.... ...+.+.... ...-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 162 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF--KDIFVSEDTG-----------------FQKPMKE 162 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGTT-----------------SCTTCHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh--heEEEecccC-----------------CCCCChH
Confidence 5778999999999999 999999999998888888888875321 0011000000 0001111
Q ss_pred hHHHHHHHHh-hcCCEEEEEcCCc-cCHHhhhcCCce-eEeccc--hHHHHhcccccccCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQ-ERKHICGMTGDGV-NDAPALKRADIG-IAVADA--TDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq-~~g~~V~miGDG~-ND~~aLk~AdVG-Iamg~g--~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
--..+.+.+. -....|+++||+. ||+.|.+.|+++ |.+..| .+..+..+|+++ +++..+..++.
T Consensus 163 ~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~ 231 (238)
T 3ed5_A 163 YFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEI--RKLEELYHILN 231 (238)
T ss_dssp HHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEE--SSGGGHHHHHT
T ss_pred HHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEE--CCHHHHHHHHH
Confidence 1122233332 2234699999998 999999999995 444433 444556789988 56777777664
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.30 E-value=6.7e-05 Score=78.70 Aligned_cols=120 Identities=15% Similarity=0.118 Sum_probs=72.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH-HHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia-~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
++.+++.+.++.|++.|+++.++|+.........- +..|+.... ...+.+... ......|
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f--~~~~~~~~~-----------------~~~~~Kp 172 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLF--SHIVLGDDP-----------------EVQHGKP 172 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTS--SCEECTTCT-----------------TCCSCTT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhhe--eeEEecchh-----------------hccCCCC
Confidence 47899999999999999999999999866544322 222332110 011111000 0001111
Q ss_pred --hhHHHHHHHHhhcC--CEEEEEcCCccCHHhhhcCC---ceeEeccchHHHHhcccccccCCChhHH
Q 041450 569 --EHKYEIVKKLQERK--HICGMTGDGVNDAPALKRAD---IGIAVADATDAARSASDIVLTEPGLSVI 630 (949)
Q Consensus 569 --~qK~~iV~~lq~~g--~~V~miGDG~ND~~aLk~Ad---VGIamg~g~~~a~~aaDivl~~~~l~~i 630 (949)
+-=..+.+.+.-.. ..|+++||+.||+.|.+.|+ ++|+++++.+..+..||+++. ++..+
T Consensus 173 ~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~--sl~el 239 (250)
T 3l5k_A 173 DPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLN--SLQDF 239 (250)
T ss_dssp STHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECS--CGGGC
T ss_pred ChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeec--CHHHh
Confidence 11122222222222 67999999999999999999 556666655557778999883 45444
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00023 Score=71.76 Aligned_cols=137 Identities=17% Similarity=0.108 Sum_probs=88.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCh---HHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQL---AIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG 565 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~---~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 565 (949)
-++.||+.++++.|++.|+++.++|+-.. ..+..+-+.+|+.... ...+....... ...+..
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~-------------~~~~~K 97 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF--DFIYASNSELQ-------------PGKMEK 97 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE--EEEEECCTTSS-------------TTCCCT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe--EEEEEcccccc-------------ccCCCC
Confidence 35889999999999999999999998776 8888899999985311 01110000000 000111
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCC-ccCHHhhhcCCcee-EeccchH-----HH-HhcccccccCCChhHHHHHHHHh
Q 041450 566 VFPEHKYEIVKKLQERKHICGMTGDG-VNDAPALKRADIGI-AVADATD-----AA-RSASDIVLTEPGLSVIVSAVLTS 637 (949)
Q Consensus 566 ~sP~qK~~iV~~lq~~g~~V~miGDG-~ND~~aLk~AdVGI-amg~g~~-----~a-~~aaDivl~~~~l~~i~~~i~~g 637 (949)
-.|+--..+.+.+.-....++||||+ .+|+.+-++|++.. .+..+.. .. ...+|+++...++..+..++...
T Consensus 98 P~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~ 177 (189)
T 3ib6_A 98 PDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLL 177 (189)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHH
Confidence 22333344555554445679999999 79999999999964 4433221 11 12678888666888888888765
Q ss_pred HHH
Q 041450 638 RAI 640 (949)
Q Consensus 638 R~~ 640 (949)
+.-
T Consensus 178 ~~~ 180 (189)
T 3ib6_A 178 KKI 180 (189)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00019 Score=74.03 Aligned_cols=122 Identities=13% Similarity=0.124 Sum_probs=78.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.|++ |+++.++|+.........-+.++- .. ...+.+ ++. ....-.|+
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~---~f-d~i~~~------------~~~-----~~~KP~~~ 156 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV---EF-DHIITA------------QDV-----GSYKPNPN 156 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS---CC-SEEEEH------------HHH-----TSCTTSHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC---cc-CEEEEc------------ccc-----CCCCCCHH
Confidence 678999999999999 899999999888776666554331 11 011100 000 01122344
Q ss_pred hHHHHHHHHhh---cCCEEEEEcCCc-cCHHhhhcCCceeEeccch-----------HHHHhcccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQE---RKHICGMTGDGV-NDAPALKRADIGIAVADAT-----------DAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~---~g~~V~miGDG~-ND~~aLk~AdVGIamg~g~-----------~~a~~aaDivl~~~~l~~i~~~i 634 (949)
-....++.+++ ....|+|+||+. ||+.|.+.|++++++.+.. +..+..+|+++ +++..+...+
T Consensus 157 ~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~~~l 234 (240)
T 3smv_A 157 NFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMAEAH 234 (240)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHHHHH
Confidence 33445333333 345699999996 9999999999999984321 22346789888 5677777665
Q ss_pred H
Q 041450 635 L 635 (949)
Q Consensus 635 ~ 635 (949)
.
T Consensus 235 ~ 235 (240)
T 3smv_A 235 K 235 (240)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00023 Score=75.54 Aligned_cols=123 Identities=15% Similarity=0.156 Sum_probs=81.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhh
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEH 570 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 570 (949)
+.|++.++++.|++.|+++.++|+.... ...+-+.+|+..... ..+.+ ++. ....-.|+-
T Consensus 107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~--~~~~~------------~~~-----~~~Kp~~~~ 166 (263)
T 3k1z_A 107 VLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFD--FVLTS------------EAA-----GWPKPDPRI 166 (263)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCS--CEEEH------------HHH-----SSCTTSHHH
T ss_pred ECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhh--EEEee------------ccc-----CCCCCCHHH
Confidence 6799999999999999999999987664 577788888743210 00000 000 011122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCc-cCHHhhhcCCceeEecc-c--h-H--HHHhcccccccCCChhHHHHHHH
Q 041450 571 KYEIVKKLQERKHICGMTGDGV-NDAPALKRADIGIAVAD-A--T-D--AARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 571 K~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdVGIamg~-g--~-~--~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
-..+.+.+.-....|+|+||+. ||+.|.+.|+++.++.+ + . + .....+|+++ +++..+..++.
T Consensus 167 ~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~ 236 (263)
T 3k1z_A 167 FQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHH
Confidence 4445555544456799999997 99999999999998852 2 1 1 1223689888 56777776653
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00011 Score=77.79 Aligned_cols=55 Identities=24% Similarity=0.207 Sum_probs=45.2
Q ss_pred hhHHHHHHHHhhc-----CCEEEEEcCCccCHHhhhcCCceeEeccch-HHHHhccccccc
Q 041450 569 EHKYEIVKKLQER-----KHICGMTGDGVNDAPALKRADIGIAVADAT-DAARSASDIVLT 623 (949)
Q Consensus 569 ~qK~~iV~~lq~~-----g~~V~miGDG~ND~~aLk~AdVGIamg~g~-~~a~~aaDivl~ 623 (949)
-.|..-++.+.+. ...|+++||+.||.+||+.|++||+|+++. +..++.||+++.
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~ 238 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDV 238 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEec
Confidence 4587777776543 357999999999999999999999999887 667778888764
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00097 Score=69.82 Aligned_cols=116 Identities=15% Similarity=0.066 Sum_probs=78.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeC--
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVF-- 567 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~s-- 567 (949)
++.+++.+.++.|+ .|+++.++|+.....+....+.+|+.... . .+++.-.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-------------------------~i~~~~kp~ 164 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF-P-------------------------RIEVVSEKD 164 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC-C-------------------------CEEEESCCS
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC-c-------------------------eeeeeCCCC
Confidence 46799999999999 99999999999988888888888874321 0 1122212
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCc-cCHHhhhcCCceeEec-cchH--------HHHhcccc-cccCCChhHHHHHH
Q 041450 568 PEHKYEIVKKLQERKHICGMTGDGV-NDAPALKRADIGIAVA-DATD--------AARSASDI-VLTEPGLSVIVSAV 634 (949)
Q Consensus 568 P~qK~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdVGIamg-~g~~--------~a~~aaDi-vl~~~~l~~i~~~i 634 (949)
|+--..+.+.+.-....|+++||+. ||+.|.+.|++++++- .|.. .....+|+ ++ +++..+..++
T Consensus 165 ~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 240 (251)
T 2pke_A 165 PQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAV 240 (251)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHH
T ss_pred HHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHH
Confidence 2322334444443445699999999 9999999999997762 3221 11235776 66 5677776655
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00078 Score=67.73 Aligned_cols=99 Identities=14% Similarity=0.116 Sum_probs=68.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|++.| ++.++|+........+.+.+|+.... ...+.+. +. ....-.|+
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f--~~~~~~~------------~~-----~~~Kp~~~ 145 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL--LAFFTSS------------AL-----GVMKPNPA 145 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC--SCEEEHH------------HH-----SCCTTCHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc--ceEEeec------------cc-----CCCCCCHH
Confidence 37799999999999999 99999999998888888888874321 0011000 00 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEec
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVA 608 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg 608 (949)
--..+.+.+.-....|+|+||+.||+.|.+.|++...+-
T Consensus 146 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 146 MYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 333444554434456999999999999999999987764
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.00025 Score=71.96 Aligned_cols=101 Identities=7% Similarity=0.002 Sum_probs=65.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH------hCCCCCCCCCccccCCccccccCCchHHHHhHhcceE
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRR------LGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGF 563 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~------~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ 563 (949)
++.|++.+.++.|++ |+++.++|+........+.+. .|+.... ...+.+ ++. ..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f--~~~~~~------------~~~-----~~ 148 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF--DKVYAS------------CQM-----GK 148 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS--SEEEEH------------HHH-----TC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc--CeEEee------------ccc-----CC
Confidence 467899999999999 999999999887777666655 4542110 000000 000 01
Q ss_pred EeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccc
Q 041450 564 AGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADA 610 (949)
Q Consensus 564 ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g 610 (949)
..-.|+--..+.+.+.-....|+++||+.||+.|.+.|+++..+.++
T Consensus 149 ~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~ 195 (211)
T 2i6x_A 149 YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDN 195 (211)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECC
Confidence 11122233344444443445699999999999999999999888643
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.01 Score=58.43 Aligned_cols=133 Identities=11% Similarity=0.026 Sum_probs=79.0
Q ss_pred ccCCceEEEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccChhhh--hcCceEEeeccCCCCCccEEEEE
Q 041450 336 LTLNKLSVDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEA--RAGITEVHFLPFNPVDKRTAITY 413 (949)
Q Consensus 336 LT~n~m~v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~--~~~~~~l~~~pF~s~~kr~sv~~ 413 (949)
||+|+|.|.++.......+.+.++++.+++..+..++ ||++.||+.++...... .......+.+|- +-+...+
T Consensus 1 LT~G~p~V~~v~~~~~~~~~~~~~lL~laaslE~~Se-HPlA~AIv~~a~~~~~~~~~~~~~~f~~i~G----~Gv~a~v 75 (165)
T 2arf_A 1 AGHMVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSE-HPLGVAVTKYCKEELGTETLGYCTDFQAVPG----CGIGCKV 75 (165)
T ss_dssp CCCCCCCEEEEEECCCTTTSCHHHHHHHHHHHHTTSC-STTHHHHHHHHHHHHTCCCCCCEEEEEEETT----TEEEEEE
T ss_pred CCCceeEEEEEEeeCCcCCCCHHHHHHHHHHHHccCC-ChHHHHHHHHHHHhcCCCCCCCcCceEEecC----ccEEEEE
Confidence 8999999998653110012467788888887766665 99999999876422000 011222333332 2222223
Q ss_pred EcC------------------------------CCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEEEEE
Q 041450 414 IDS------------------------------NGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVG 463 (949)
Q Consensus 414 ~~~------------------------------~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a 463 (949)
... ..+-+.+.-|+++.+.+..- .+.......+..+..+|..++.+|
T Consensus 76 ~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~~~~~~~~~~~~~~~~G~T~v~va 152 (165)
T 2arf_A 76 SNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGL---TISSDVSDAMTDHEMKGQTAILVA 152 (165)
T ss_dssp ECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHC---SSCHHHHHHHHHHHTTTSEEEEEE
T ss_pred cCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCC---CCCHHHHHHHHHHHhCCCeEEEEE
Confidence 211 11234677799988754211 111223445566777899999998
Q ss_pred EeecCCccccCCCCCceEEEEEecCC
Q 041450 464 RQTVPEKTKESEGSPWEFVGLLPLFD 489 (949)
Q Consensus 464 ~~~~~~~~~~~~e~~l~llG~~~i~D 489 (949)
... +++|++++.|
T Consensus 153 ~dg-------------~~~g~i~l~D 165 (165)
T 2arf_A 153 IDG-------------VLCGMIAIAD 165 (165)
T ss_dssp ETT-------------EEEEEEEECC
T ss_pred ECC-------------EEEEEEEEEC
Confidence 754 7999999987
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.00088 Score=71.24 Aligned_cols=57 Identities=19% Similarity=0.303 Sum_probs=47.8
Q ss_pred hHHHHHHHHhh-cCCEEEEEcC----CccCHHhhhcCC-ceeEeccchHHHHhcccccccCCC
Q 041450 570 HKYEIVKKLQE-RKHICGMTGD----GVNDAPALKRAD-IGIAVADATDAARSASDIVLTEPG 626 (949)
Q Consensus 570 qK~~iV~~lq~-~g~~V~miGD----G~ND~~aLk~Ad-VGIamg~g~~~a~~aaDivl~~~~ 626 (949)
.|..-++.+.. ....|+++|| |.||.+||+.|+ +|++|+++.+..++.||+++..++
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETA 259 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC-
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCc
Confidence 68888888811 2457999999 999999999999 599999999999999999986554
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0052 Score=62.47 Aligned_cols=124 Identities=18% Similarity=0.186 Sum_probs=77.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.++++.|++.|+++.++|+.....+...-+.+|+.... ...+...... ...-.|+
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f--d~~~~~~~~~-----------------~~KP~p~ 144 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF--DVMVFGDQVK-----------------NGKPDPE 144 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECGGGSS-----------------SCTTSTH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc--cccccccccC-----------------CCcccHH
Confidence 35789999999999999999999999999999999999985321 0111110000 1111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-e-Ee--c-cchHHHHhcccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-I-AV--A-DATDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-I-am--g-~g~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
-=....+.+.-....|+||||..+|+.+-++|++. | ++ | +..+..+++.+.++.++ ..++..+
T Consensus 145 ~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~~--~eli~~l 212 (216)
T 3kbb_A 145 IYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKP--EEILNVL 212 (216)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEECG--GGHHHHH
T ss_pred HHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECCH--HHHHHHH
Confidence 22334444444445699999999999999999985 3 33 3 22344444444444433 3444444
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.00083 Score=62.98 Aligned_cols=104 Identities=14% Similarity=0.136 Sum_probs=66.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ...+... +. ....-.|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~------------~~-----~~~Kp~~~ 78 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV--DKVLLSG------------EL-----GVEKPEEA 78 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS--SEEEEHH------------HH-----SCCTTSHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc--cEEEEec------------cC-----CCCCCCHH
Confidence 46789999999999999999999999888877877888774321 0001000 00 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccchH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADATD 612 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~~ 612 (949)
--..+.+.+.-....++|+||+.+|+.+.++|++- |.+..+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~~~~ 122 (137)
T 2pr7_A 79 AFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFDR 122 (137)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECSCHHH
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCChHH
Confidence 22334444433344689999999999999999974 33344443
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0013 Score=67.62 Aligned_cols=134 Identities=19% Similarity=0.050 Sum_probs=74.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhCCCCCCCCCccccCCccccccCCchH
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPV 553 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~---------------~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~ 553 (949)
.++.|++.+++++|++.|+++.++|+... ..+....+++|+.-+. ........+..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~---~~~~~~~~~g~~~---- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDM---VLACAYHEAGVGP---- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSE---EEEECCCTTCCST----
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceee---EEEeecCCCCcee----
Confidence 46889999999999999999999999887 5777788888873110 0000000000000
Q ss_pred HHHhHhcce-EEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCcee--Eeccc--h-HHHHhcccccccCCCh
Q 041450 554 EELIEKADG-FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGI--AVADA--T-DAARSASDIVLTEPGL 627 (949)
Q Consensus 554 ~~~~~~~~v-~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGI--amg~g--~-~~a~~aaDivl~~~~l 627 (949)
+. ...+ +..-.|+-=..+.+.+.-....++||||+.||+.+.+.|++.. .+..| . +.....+|+++ +++
T Consensus 128 -~~--~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i--~~l 202 (218)
T 2o2x_A 128 -LA--IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDS--SEL 202 (218)
T ss_dssp -TC--CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSH--HHH
T ss_pred -ec--ccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEec--ccH
Confidence 00 0000 0000111111223333323346899999999999999999864 33322 1 11122466665 345
Q ss_pred hHHHHHH
Q 041450 628 SVIVSAV 634 (949)
Q Consensus 628 ~~i~~~i 634 (949)
..+..++
T Consensus 203 ~el~~~l 209 (218)
T 2o2x_A 203 GDLLAAI 209 (218)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0071 Score=61.27 Aligned_cols=95 Identities=11% Similarity=0.030 Sum_probs=59.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.++++.|++.|+++.++||.....+..+.. . +....+.+.... ...-.|+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~----~~d~v~~~~~~~-----------------~~KP~p~ 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---P----VNDWMIAAPRPT-----------------AGWPQPD 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---T----TTTTCEECCCCS-----------------SCTTSTH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---c----cCCEEEECCcCC-----------------CCCCChH
Confidence 577999999999999999999999998877644432 1 011111111000 0111122
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCccCHHhhhcCCc-eeEec
Q 041450 570 HKYEIVKKLQER-KHICGMTGDGVNDAPALKRADI-GIAVA 608 (949)
Q Consensus 570 qK~~iV~~lq~~-g~~V~miGDG~ND~~aLk~AdV-GIamg 608 (949)
-=....+.+.-. ...+.||||..+|+.+-++|++ .|++.
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 212233333322 2468999999999999999998 46664
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0012 Score=69.32 Aligned_cols=52 Identities=19% Similarity=0.257 Sum_probs=42.4
Q ss_pred hHHHHHHHH-hhcCCEEEEEcC----CccCHHhhhcCCc-eeEeccchHHHHhccccc
Q 041450 570 HKYEIVKKL-QERKHICGMTGD----GVNDAPALKRADI-GIAVADATDAARSASDIV 621 (949)
Q Consensus 570 qK~~iV~~l-q~~g~~V~miGD----G~ND~~aLk~AdV-GIamg~g~~~a~~aaDiv 621 (949)
.|..-++.+ .-....|+++|| |.||.+||+.|+. |++|+++.+..|+.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 577777776 112457999999 9999999999988 999999999999999987
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.00043 Score=69.83 Aligned_cols=94 Identities=5% Similarity=-0.011 Sum_probs=60.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH-hCCCCCCCCCccccCCccccccCCchHHHHhHhcceEE----
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFA---- 564 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~-~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a---- 564 (949)
++.|++.+.++.|++.|+++.++|+........+... .|+ ...+. .+++
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l------------------------~~~f~--~~~~~~~~ 144 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEI------------------------RDAAD--HIYLSQDL 144 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHH------------------------HHHCS--EEEEHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccCh------------------------hhhee--eEEEeccc
Confidence 4679999999999999999999998654332211111 121 11110 0111
Q ss_pred ---eeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEecc
Q 041450 565 ---GVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVAD 609 (949)
Q Consensus 565 ---r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~ 609 (949)
.-.|+--..+.+.+.-....++++||+.||+.|.+.|++...+.+
T Consensus 145 ~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~ 192 (206)
T 2b0c_A 145 GMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVK 192 (206)
T ss_dssp TCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEec
Confidence 112333344555554445578999999999999999999877753
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0041 Score=65.89 Aligned_cols=123 Identities=11% Similarity=0.118 Sum_probs=78.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.++++.|++ |+++.++|+.....+..+-+.+|+.... ...+.+.... ...-.|+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~KP~p~ 180 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQK-----------------EEKPAPS 180 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGSS-----------------SCTTCHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh--heEEecCCCC-----------------CCCCCHH
Confidence 578999999999998 6999999999998888888999985321 1111110000 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcC-CccCHHhhhcCCc--eeEeccchH---HHHhcccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGD-GVNDAPALKRADI--GIAVADATD---AARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGD-G~ND~~aLk~AdV--GIamg~g~~---~a~~aaDivl~~~~l~~i~~~i 634 (949)
--..+.+.+.-....++|+|| ..||+.+-+.|++ .|.+..+.. .....+|+++ +++..+...+
T Consensus 181 ~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el~~~l 249 (260)
T 2gfh_A 181 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALL 249 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEE--CCHHHHHHHH
Confidence 223344444434456999999 4999999999999 577753311 1223577776 4566665554
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.11 E-value=0.0028 Score=71.23 Aligned_cols=137 Identities=13% Similarity=0.094 Sum_probs=79.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.++++.|+++|+++.++|+.....+..+-+.+|+.........+.+..... ..+......-...-.|+
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~------~~~~~~~~kp~~KP~P~ 288 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLE------AENMYPQARPLGKPNPF 288 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHH------HHHHSTTSCCCCTTSTH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccc------cccccccccCCCCCCHH
Confidence 578999999999999999999999999999988889999853211001111110000 00000000000011111
Q ss_pred hHHHHHHHHh--------------hcCCEEEEEcCCccCHHhhhcCCce-eEeccch-------HHHHhcccccccCCCh
Q 041450 570 HKYEIVKKLQ--------------ERKHICGMTGDGVNDAPALKRADIG-IAVADAT-------DAARSASDIVLTEPGL 627 (949)
Q Consensus 570 qK~~iV~~lq--------------~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~-------~~a~~aaDivl~~~~l 627 (949)
-=....+.+. -....|+|+||+.+|+.|-++|++. |++..|. +.....+|+++ +++
T Consensus 289 ~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi--~sl 366 (384)
T 1qyi_A 289 SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHL 366 (384)
T ss_dssp HHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSG
T ss_pred HHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEE--CCH
Confidence 1111112111 1235689999999999999999985 5554321 22233688888 467
Q ss_pred hHHHHHH
Q 041450 628 SVIVSAV 634 (949)
Q Consensus 628 ~~i~~~i 634 (949)
..+...+
T Consensus 367 ~eL~~~l 373 (384)
T 1qyi_A 367 GELRGVL 373 (384)
T ss_dssp GGHHHHH
T ss_pred HHHHHHH
Confidence 7776655
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.90 E-value=0.0041 Score=63.60 Aligned_cols=117 Identities=20% Similarity=0.218 Sum_probs=71.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|++. +++.++|+.... -+.+|+.... ...+.. ++. ....-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f--~~~~~~------------~~~-----~~~kp~~~ 159 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYF--AFALCA------------EDL-----GIGKPDPA 159 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGC--SEEEEH------------HHH-----TCCTTSHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHe--eeeEEc------------ccc-----CCCCcCHH
Confidence 4678999999999998 999999987654 2334442110 000000 000 00111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCc-cCHHhhhcCCceeEe---c-cchHHHHhcccccccCCChhHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGV-NDAPALKRADIGIAV---A-DATDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdVGIam---g-~g~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
--..+.+.+.-....|+|+||+. ||+.|.+.|+++.++ + ...+. ...+|+++ +++..+..++
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l 226 (230)
T 3vay_A 160 PFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVL 226 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHH
Confidence 22334444443445699999998 999999999998776 2 21122 55788888 5677777665
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=95.73 E-value=0.0045 Score=63.72 Aligned_cols=102 Identities=10% Similarity=-0.003 Sum_probs=65.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH------hCCCCCCCCCccccCCccccccCCchHHHHhHhcceE
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRR------LGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGF 563 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~------~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ 563 (949)
++.|++.+.++.|++. +++.++|+.....+..+.+. .|+.... ...+.. ++. ..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~f--d~i~~~------------~~~-----~~ 171 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYF--EKTYLS------------YEM-----KM 171 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHC--SEEEEH------------HHH-----TC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhC--CEEEee------------ccc-----CC
Confidence 3679999999999999 99999999988877766543 3331100 000000 000 01
Q ss_pred EeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccch
Q 041450 564 AGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADAT 611 (949)
Q Consensus 564 ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~ 611 (949)
..-.|+-=..+.+.+.-....|+|+||+.||+.|.+.|+++..+.++.
T Consensus 172 ~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~ 219 (229)
T 4dcc_A 172 AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAG 219 (229)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCH
Confidence 112233334455555444567999999999999999999998886443
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.013 Score=61.93 Aligned_cols=85 Identities=15% Similarity=0.067 Sum_probs=63.6
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCCh----HHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceE
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGF 563 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~----~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ 563 (949)
..++.|++.+.++.|++.|+++.++||... +.+..--+++|+.... .. .++
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~--~~-----------------------~Li 153 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVN--DK-----------------------TLL 153 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCS--TT-----------------------TEE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccc--cc-----------------------eeE
Confidence 356889999999999999999999999864 4677777888985310 00 123
Q ss_pred EeeChhhHHHHHHHHhhcC-CEEEEEcCCccCHHh
Q 041450 564 AGVFPEHKYEIVKKLQERK-HICGMTGDGVNDAPA 597 (949)
Q Consensus 564 ar~sP~qK~~iV~~lq~~g-~~V~miGDG~ND~~a 597 (949)
-|-....|....+.+++.| .+|+++||-.+|.++
T Consensus 154 lr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 154 LKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp EESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred ecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 3323467888888888754 578899999999987
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.59 E-value=0.0067 Score=64.15 Aligned_cols=43 Identities=19% Similarity=0.297 Sum_probs=34.9
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcC---CChHHHHHHHHHhCCC
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITG---DQLAIGKETGRRLGMG 530 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTG---D~~~tA~~ia~~~Gi~ 530 (949)
.+.+-+++.++|++|++.|+++.++|| ..........+++|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 445567899999999999999999999 5666666666777874
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.36 E-value=0.025 Score=59.70 Aligned_cols=40 Identities=15% Similarity=0.119 Sum_probs=33.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcC---CChHHHHHHHHHhCCC
Q 041450 491 PRHDSAETIRRALDLGVNVKMITG---DQLAIGKETGRRLGMG 530 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTG---D~~~tA~~ia~~~Gi~ 530 (949)
+-+++.++|++|+++|++++++|| ..........+++|+.
T Consensus 23 ~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 23 KIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 446899999999999999999998 5666666777788874
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.28 E-value=0.013 Score=61.83 Aligned_cols=85 Identities=14% Similarity=0.044 Sum_probs=62.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCCh----HHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceE
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGF 563 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~----~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ 563 (949)
.+++.|++.+.++.|++.|+++.++||... +.+..--+++|+.... .. .++
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~--~~-----------------------~Li 153 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVE--ES-----------------------AFY 153 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCS--GG-----------------------GEE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccc--cc-----------------------cee
Confidence 456889999999999999999999998854 4666777788985310 00 122
Q ss_pred EeeChhhHHHHHHHHhhcC-CEEEEEcCCccCHHh
Q 041450 564 AGVFPEHKYEIVKKLQERK-HICGMTGDGVNDAPA 597 (949)
Q Consensus 564 ar~sP~qK~~iV~~lq~~g-~~V~miGDG~ND~~a 597 (949)
-|-.-..|....+.+++.| .+|+++||-.+|.++
T Consensus 154 lr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 154 LKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp EESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred ccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 2322356777777777774 478899999999886
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.08 E-value=0.029 Score=57.73 Aligned_cols=112 Identities=12% Similarity=0.100 Sum_probs=71.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.+.++.|++.| ++.++|+-....+..+.+.+|+..... . .+... .
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~------------------------~-~~~~~---~ 146 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVE------------------------G-RVLIY---I 146 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTT------------------------T-CEEEE---S
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcC------------------------e-eEEec---C
Confidence 58899999999999999 999999999888888888888742110 0 00111 1
Q ss_pred hHHHHHHHHhh--cCCEEEEEcCCcc---CHHhhhcCCce-eEeccc-----hHHHHhc--ccccccCCChhHHHH
Q 041450 570 HKYEIVKKLQE--RKHICGMTGDGVN---DAPALKRADIG-IAVADA-----TDAARSA--SDIVLTEPGLSVIVS 632 (949)
Q Consensus 570 qK~~iV~~lq~--~g~~V~miGDG~N---D~~aLk~AdVG-Iamg~g-----~~~a~~a--aDivl~~~~l~~i~~ 632 (949)
.|..+.+.+.+ ....++|+||+.| |..+-+.|++- |.+..| .+..++. +|+++ +++..+..
T Consensus 147 ~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i--~~~~el~~ 220 (231)
T 2p11_A 147 HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTV--ERIGDLVE 220 (231)
T ss_dssp SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEE--SSGGGGGG
T ss_pred ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceee--cCHHHHHH
Confidence 22223333332 3467999999999 65565677753 344322 2233333 78887 34555443
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.04 E-value=0.023 Score=59.42 Aligned_cols=116 Identities=10% Similarity=0.093 Sum_probs=73.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|++.|+++.+.|+-. .+..+-+.+|+.... ...+.+.... ...-.|+
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~F--d~i~~~~~~~-----------------~~KP~p~ 174 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKF--DFIADAGKCK-----------------NNKPHPE 174 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGC--SEECCGGGCC-----------------SCTTSSH
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccc--ceeecccccC-----------------CCCCcHH
Confidence 578999999999999999998877654 355667888985321 1111111000 1111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc-eeEeccchHHHHhcccccccCCChhHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADI-GIAVADATDAARSASDIVLTEPGLSVI 630 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~g~~~a~~aaDivl~~~~l~~i 630 (949)
-=..+.+.+.-....|+||||..+|+.|-++|++ .|++++..+. ..||+++- ++..+
T Consensus 175 ~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~--~~ad~vi~--~l~eL 232 (250)
T 4gib_A 175 IFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENL--KKANLVVD--STNQL 232 (250)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTT--TTSSEEES--SGGGC
T ss_pred HHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHh--ccCCEEEC--ChHhC
Confidence 3334445554444569999999999999999998 5777644332 35899884 44443
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.98 E-value=0.0075 Score=59.86 Aligned_cols=100 Identities=11% Similarity=0.035 Sum_probs=61.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC---------------ChHHHHHHHHHhCCCCCCCCCccccC----Ccc-ccccC
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSSLLG----QSK-DESIA 549 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD---------------~~~tA~~ia~~~Gi~~~~~~~~~l~~----~~~-~~~~~ 549 (949)
++.|++.++++.|++.|+++.++|+- ....+..+.+.+|+.- ......+ ... ....+
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d~v~~s~~~~~~~~~~~KP~ 118 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF---DEVLICPHLPADECDCRKPK 118 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE---EEEEEECCCGGGCCSSSTTS
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe---eEEEEcCCCCcccccccCCC
Confidence 57899999999999999999999997 4567777888888741 0000000 000 00000
Q ss_pred CchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccc
Q 041450 550 SMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADA 610 (949)
Q Consensus 550 ~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g 610 (949)
...+.. +.+.+.-....++||||..+|+.+-+.|++- |.+..+
T Consensus 119 p~~~~~------------------~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 119 VKLVER------------------YLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp CGGGGG------------------GC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred HHHHHH------------------HHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 111111 1122222234588999999999999999985 555443
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=94.84 E-value=0.079 Score=55.78 Aligned_cols=42 Identities=14% Similarity=0.014 Sum_probs=36.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHhCCC
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMIT---GDQLAIGKETGRRLGMG 530 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlT---GD~~~tA~~ia~~~Gi~ 530 (949)
+++-+++.++|++|++.|+++.++| |..........+++|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5566889999999999999999999 88888877778888874
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.71 E-value=0.028 Score=57.29 Aligned_cols=95 Identities=13% Similarity=0.027 Sum_probs=59.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|++.|+++.++|+... .+..+.+.+|+.... ...+.+.. . ....-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f--~~~~~~~~---------~--------~~~Kp~~~ 154 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYF--DALALSYE---------I--------KAVKPNPK 154 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGC--SEEC----------------------------CC
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHe--eEEEeccc---------c--------CCCCCCHH
Confidence 3679999999999999999999998866 467788888874321 01110000 0 01111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcc-CHHhhhcCCceeEe
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVN-DAPALKRADIGIAV 607 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~N-D~~aLk~AdVGIam 607 (949)
--..+.+.+.-. . +|+||+.+ |+.+-+.|++....
T Consensus 155 ~~~~~~~~~~~~--~-~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 155 IFGFALAKVGYP--A-VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HHHHHHHHHCSS--E-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHHHHHHcCCC--e-EEEcCCchHhHHHHHHCCCeEEE
Confidence 222333333322 2 89999999 99999999987543
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=94.67 E-value=0.0091 Score=62.79 Aligned_cols=58 Identities=24% Similarity=0.290 Sum_probs=46.3
Q ss_pred EeeChh--hHHHHHHHHhhcCCEEEEEcC----CccCHHhhhcCC-ceeEeccchHHHHhccccc
Q 041450 564 AGVFPE--HKYEIVKKLQERKHICGMTGD----GVNDAPALKRAD-IGIAVADATDAARSASDIV 621 (949)
Q Consensus 564 ar~sP~--qK~~iV~~lq~~g~~V~miGD----G~ND~~aLk~Ad-VGIamg~g~~~a~~aaDiv 621 (949)
-.+.|. .|..-++.|.+....|+++|| |.||.+||+.|+ +|++|+++.+..+..+++.
T Consensus 179 leI~~~gv~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~~~ 243 (246)
T 3f9r_A 179 FDVFPVGWDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEKII 243 (246)
T ss_dssp EEEEETTCSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHHHh
Confidence 344443 788888877766678999999 799999999996 8999999988888665543
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.37 E-value=0.04 Score=59.36 Aligned_cols=100 Identities=14% Similarity=-0.001 Sum_probs=67.5
Q ss_pred cCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHH---HHHHHH--------hCCCCCCCCCccccCCccccccCCchHHH
Q 041450 487 LFDPPRHDSAETIRRALDLGVNVKMITGDQLAIG---KETGRR--------LGMGTNMYPSSSLLGQSKDESIASMPVEE 555 (949)
Q Consensus 487 i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA---~~ia~~--------~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~ 555 (949)
.++++.|++.++++.|++.|+++.++||-....+ ...-+. .|+. + ...+.+...
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~---~-~~~~~~~~~----------- 249 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP---L-VMQCQREQG----------- 249 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC---C-SEEEECCTT-----------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC---c-hheeeccCC-----------
Confidence 4678899999999999999999999999875432 222233 5762 1 111111100
Q ss_pred HhHhcceEEeeChhhHHHHHHHHhhcC-CEEEEEcCCccCHHhhhcCCce-eEec
Q 041450 556 LIEKADGFAGVFPEHKYEIVKKLQERK-HICGMTGDGVNDAPALKRADIG-IAVA 608 (949)
Q Consensus 556 ~~~~~~v~ar~sP~qK~~iV~~lq~~g-~~V~miGDG~ND~~aLk~AdVG-Iamg 608 (949)
-.+-.|+-|..+.+.+.... ..++|+||..+|+.|-++|++- |++.
T Consensus 250 -------~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~ 297 (301)
T 1ltq_A 250 -------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVA 297 (301)
T ss_dssp -------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECS
T ss_pred -------CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEec
Confidence 01223677788888775444 3468999999999999999985 4444
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.33 E-value=0.16 Score=52.78 Aligned_cols=40 Identities=23% Similarity=0.177 Sum_probs=34.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHhCCC
Q 041450 491 PRHDSAETIRRALDLGVNVKMIT---GDQLAIGKETGRRLGMG 530 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlT---GD~~~tA~~ia~~~Gi~ 530 (949)
+-+++.++++.+++.|+++..+| |..........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 55788999999999999999999 98888888777788874
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=93.27 E-value=0.078 Score=56.05 Aligned_cols=42 Identities=14% Similarity=0.169 Sum_probs=33.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCh---HHHHHHHHHhCCC
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQL---AIGKETGRRLGMG 530 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~---~tA~~ia~~~Gi~ 530 (949)
.++-|++.++|+.|++.|+++.++||... ......-+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 35778999999999999999999999873 3444445677875
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=92.97 E-value=0.0099 Score=61.21 Aligned_cols=53 Identities=13% Similarity=0.082 Sum_probs=35.0
Q ss_pred HHHHHHHHhh----cCCEEEEEcCC-ccCHHhhhcCCceeEe---ccch-HHHH---hccccccc
Q 041450 571 KYEIVKKLQE----RKHICGMTGDG-VNDAPALKRADIGIAV---ADAT-DAAR---SASDIVLT 623 (949)
Q Consensus 571 K~~iV~~lq~----~g~~V~miGDG-~ND~~aLk~AdVGIam---g~g~-~~a~---~aaDivl~ 623 (949)
|...++.+.+ ....|+|+||+ .||+.|++.|++++++ |.+. +..+ ..+|+++.
T Consensus 178 k~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 178 SPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp STHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred CHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEEC
Confidence 4455544433 23569999999 7999999999999554 4332 2222 35788773
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=92.69 E-value=0.096 Score=57.33 Aligned_cols=121 Identities=14% Similarity=0.133 Sum_probs=73.3
Q ss_pred ecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCcccccc---CCc-h-HHHHhH--
Q 041450 486 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESI---ASM-P-VEELIE-- 558 (949)
Q Consensus 486 ~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~---~~~-~-~~~~~~-- 558 (949)
.....+.++..+.++.|+++|++|+++||-.......+|..++..-++ +.+.+.|....... ... . ..+...
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygI-p~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~ 217 (327)
T 4as2_A 139 VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNA-KPENVIGVTTLLKNRKTGELTTARKQIAEGK 217 (327)
T ss_dssp ECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCC-CGGGEEEECEEEECTTTCCEECHHHHHHTTC
T ss_pred ccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCC-CHHHeEeeeeeeecccccccccccccccccc
Confidence 344567899999999999999999999999999999999986432222 22223222111000 000 0 001100
Q ss_pred -------hcceEEe-----eChhhHHHHHHHHhhc-CCEEEEEcCCc-cCHHhhhc--CCceeEe
Q 041450 559 -------KADGFAG-----VFPEHKYEIVKKLQER-KHICGMTGDGV-NDAPALKR--ADIGIAV 607 (949)
Q Consensus 559 -------~~~v~ar-----~sP~qK~~iV~~lq~~-g~~V~miGDG~-ND~~aLk~--AdVGIam 607 (949)
+...-.+ +.-+-|..-++..-+. ...+++.||+. .|.+||.. ++.|+++
T Consensus 218 y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 218 YDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp CCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred ccccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 0001111 1235687777766533 45689999995 79999965 5666665
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=92.63 E-value=0.065 Score=56.62 Aligned_cols=97 Identities=14% Similarity=0.030 Sum_probs=63.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh---CCCCCCCCCccccCCccccccCCchHHHHhHhcceEEee
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRL---GMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGV 566 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~---Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~ 566 (949)
++.||+.++++.|++.|+++.++|.-....+..+-+.+ |+.... ...+.. . +...-
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~f--d~i~~~-~------------------~~~KP 188 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV--DGHFDT-K------------------IGHKV 188 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC--SEEECG-G------------------GCCTT
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhc--cEEEec-C------------------CCCCC
Confidence 58899999999999999999999998887777665543 343211 001100 0 00111
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEe
Q 041450 567 FPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAV 607 (949)
Q Consensus 567 sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iam 607 (949)
.|+-=..+.+.+.-....|+||||..+|+.+-++|++- |.+
T Consensus 189 ~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v 230 (261)
T 1yns_A 189 ESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVV 230 (261)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEE
Confidence 12222334444444445699999999999999999984 455
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=91.37 E-value=0.15 Score=53.53 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=34.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHhCCC
Q 041450 490 PPRHDSAETIRRALDLGVNVKMIT---GDQLAIGKETGRRLGMG 530 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlT---GD~~~tA~~ia~~~Gi~ 530 (949)
++ +++.++|++++++|++++++| |..........+++|+.
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 35 899999999999999999999 77777777788888874
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=90.86 E-value=0.1 Score=53.27 Aligned_cols=90 Identities=19% Similarity=0.197 Sum_probs=55.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHH----HHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe-
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKE----TGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG- 565 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~----ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar- 565 (949)
+.+++.+.++.|++.|+++.++|+-....+.. +....+... .+... ..+.+
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~--------~~~~~----------------~~~~~~ 144 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA--------TNMNP----------------VIFAGD 144 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT--------TTBCC----------------CEECCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc--------cccch----------------hhhcCC
Confidence 57799999999999999999999986443222 222222210 00000 00111
Q ss_pred -eChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEec
Q 041450 566 -VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVA 608 (949)
Q Consensus 566 -~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg 608 (949)
-.|+-..++ +++.|. ++|+||..+|+.+-+.|++- |.+.
T Consensus 145 KP~p~~~~~~---~~~~g~-~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 145 KPGQNTKSQW---LQDKNI-RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp CTTCCCSHHH---HHHTTE-EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred CCCHHHHHHH---HHHCCC-EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 123333333 334444 99999999999999999985 5554
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=90.83 E-value=0.22 Score=51.54 Aligned_cols=100 Identities=8% Similarity=-0.015 Sum_probs=63.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++.+.++.|++.|+++.++|+... +..+-+.+|+.... ...+.+.... ...-.|+
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~f--d~i~~~~~~~-----------------~~KP~p~ 153 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFF--TFCADASQLK-----------------NSKPDPE 153 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGC--SEECCGGGCS-----------------SCTTSTH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccc--cccccccccc-----------------CCCCcHH
Confidence 4689999999999999999999997654 44556778875321 1111111100 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc-eeEeccc
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADI-GIAVADA 610 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~g 610 (949)
-=....+.+.-....|+||||..+|+.|-++|++ .|++..|
T Consensus 154 ~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g 195 (243)
T 4g9b_A 154 IFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAG 195 (243)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence 2223344444344569999999999999999998 4666644
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=89.93 E-value=17 Score=45.71 Aligned_cols=168 Identities=12% Similarity=0.062 Sum_probs=78.3
Q ss_pred hccCCCChHHHHHHHHhhhcchhccccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH-HH------H-h-h--
Q 041450 668 LWKFDFPPFMILIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALVTAFFFW-LI------H-D-T-- 736 (949)
Q Consensus 668 ~~~~~~~~~~il~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~------~-~-~-- 736 (949)
++++.+..+..+.+.+.....-+.--.++.+..+.-..+.+.+++..++++++....+.+++++ .. + . .
T Consensus 795 ~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (995)
T 3ar4_A 795 WVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHF 874 (995)
T ss_dssp HHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGC
T ss_pred HHHHHHHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhccc
Confidence 4455556555554443321111111223334455666777778888888877665433333222 10 0 0 0
Q ss_pred -------cccc----cccCcccccCchhHHHHHHHHHHHHHHHHHhhhhc-c--CCCCcccChhHHHHHHHHHHHHHHHH
Q 041450 737 -------RFFT----NTFNLKEIHEKPDMLSAALYLQVSIISQALIFVTR-S--RSWSFVERPGVMLVGAFLVAQLLATI 802 (949)
Q Consensus 737 -------~~~~----~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r-~--~~~~~~~~~~~~l~~~~~~~~~~~~~ 802 (949)
..|. ..|. ..........++++.++. ..+..-..+ + ....|.+.+-++.+++.++.+++..+
T Consensus 875 ~~~~~~~~~~~~~~~~~~~--~~~~~t~~f~~lv~~~~~--~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~ 950 (995)
T 3ar4_A 875 MQCTEDHPHFEGLDCEIFE--APEPMTMALSVLVTIEMC--NALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILY 950 (995)
T ss_dssp SSCSSCCSCCSCSCCCGGG--CHHHHHHHHHHHHHHHHH--HHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccc--chhhhhHHHHHHHHHHHH--HHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHH
Confidence 0110 1111 000122333455555443 333332211 1 12345555555555555444444433
Q ss_pred HH-HhhcccccccCchhHHHHHHHHHHHHHHHHHhHHH
Q 041450 803 IA-VYAKWEFARIEGIGWGWAGAIWIFSIITYLPLDPL 839 (949)
Q Consensus 803 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (949)
+. ....+++..++...|.+.+.+.+..+++.-+..++
T Consensus 951 ~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~ 988 (995)
T 3ar4_A 951 VDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 988 (995)
T ss_dssp STHHHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 33446677778888988777666666665555544
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=87.13 E-value=0.46 Score=54.70 Aligned_cols=99 Identities=7% Similarity=-0.021 Sum_probs=57.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC---ChHHHHHHHHH-hCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGD---QLAIGKETGRR-LGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG 565 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD---~~~tA~~ia~~-~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 565 (949)
++.+|+.++++.|++.|+++.++|+- .......+... .|+.... ..++.+... ....
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~f--d~i~~~~~~-----------------~~~K 160 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHF--DFLIESCQV-----------------GMVK 160 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTS--SEEEEHHHH-----------------TCCT
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhhe--eEEEecccc-----------------CCCC
Confidence 57899999999999999999999985 11111111111 1332110 011110000 0111
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEe
Q 041450 566 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAV 607 (949)
Q Consensus 566 ~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam 607 (949)
-.|+-=..+.+.+.-....|+|+||..||+.+-+.|++....
T Consensus 161 P~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 161 PEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTIL 202 (555)
T ss_dssp TCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEE
Confidence 123333344444444455689999999999999999997554
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=86.25 E-value=0.19 Score=52.16 Aligned_cols=118 Identities=15% Similarity=0.151 Sum_probs=63.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHH--HHhHhcceEEeeCh
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVE--ELIEKADGFAGVFP 568 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~v~ar~sP 568 (949)
+.+++.+.++.|+ .|+++ ++|+.....+.......|+. .-++ +.+...+....-.|
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~Kp 180 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPG--------------------PFVTALEYATDTKAMVVGKP 180 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSH--------------------HHHHHHHHHHTCCCEECSTT
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCc--------------------HHHHHHHHHhCCCceEecCC
Confidence 6689999999999 89999 88876532111100111110 0011 01111111111122
Q ss_pred hhHHHHHHHHh-hcC---CEEEEEcCCc-cCHHhhhcCCce-eEeccc---h-HHH--HhcccccccCCChhHHHHHH
Q 041450 569 EHKYEIVKKLQ-ERK---HICGMTGDGV-NDAPALKRADIG-IAVADA---T-DAA--RSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 569 ~qK~~iV~~lq-~~g---~~V~miGDG~-ND~~aLk~AdVG-Iamg~g---~-~~a--~~aaDivl~~~~l~~i~~~i 634 (949)
|..+.+.+. +.| ..|+|+||+. ||+.|.+.|++- |.+..| . +.. ...+|+++ +++..+...+
T Consensus 181 --~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~--~~l~~l~~~l 254 (259)
T 2ho4_A 181 --EKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTC--ESFPHAVDHI 254 (259)
T ss_dssp --SHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEE--SCHHHHHHHH
T ss_pred --CHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEE--CCHHHHHHHH
Confidence 334444433 323 4689999998 999999999985 444433 1 111 23467776 5677766554
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=85.45 E-value=0.025 Score=56.61 Aligned_cols=41 Identities=20% Similarity=0.212 Sum_probs=34.0
Q ss_pred CCCCcchHHHHHHHHhC-CCeEEEEcCCChHHHHHHHHHhCC
Q 041450 489 DPPRHDSAETIRRALDL-GVNVKMITGDQLAIGKETGRRLGM 529 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~a-GI~v~mlTGD~~~tA~~ia~~~Gi 529 (949)
-++.||+.++++.|++. |+++.++|+-....+..+.+.+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 35789999999999999 999999999877666666666654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 949 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 4e-30 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 3e-28 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 5e-28 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-04 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 8e-21 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 4e-19 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 4e-12 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 9e-10 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 1e-09 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-07 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 2e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 9e-07 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 5e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-05 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 2e-05 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 1e-04 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 1e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 2e-04 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 5e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 7e-04 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 114 bits (287), Expect = 4e-30
Identities = 60/156 (38%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Query: 480 EFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGM-GTNMYPSSS 538
DPPR + +I+ D G+ V MITGD RR+G+ G N +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 539 LLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPAL 598
+ + + E +A FA V P HK +IV+ LQ I MTGDGVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 599 KRADIGIAVADATDAARSASDIVLTEPGLSVIVSAV 634
K+A+IGIA+ T A++AS++VL + S IV+AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 115 bits (288), Expect = 3e-28
Identities = 30/346 (8%), Positives = 79/346 (22%), Gaps = 37/346 (10%)
Query: 312 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSV-----DKSLIEVFVKGTDSDG------- 359
+ + + + + + + + DK L ++ G +S+
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVF 85
Query: 360 LLLAAARASRVENQD--AIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSN 417
+ ++ + + A + + + + L + + N
Sbjct: 86 SIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN 145
Query: 418 GDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGS 477
+ + A + + + A+ + +G + + K+
Sbjct: 146 NIYAALEEFATTE----LHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKK-IAR 200
Query: 478 PWEFVGLLPLFDP--PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYP 535
G + P + + G + + TG LG+
Sbjct: 201 TTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA 260
Query: 536 SSSLLG--------QSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGM 587
P A Y + K +
Sbjct: 261 DFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320
Query: 588 TGDGVNDAPALKRADI-GIAVA-------DATDAARSASDIVLTEP 625
GD + D + ++ I A + +D V+
Sbjct: 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 116 bits (292), Expect = 5e-28
Identities = 48/327 (14%), Positives = 102/327 (31%), Gaps = 93/327 (28%)
Query: 19 IPVAEVFEQLKCTP-KGLTTAEGEKRLQIFGYNKL-EEKKESKLLKFLGFMWNPLSWVME 76
E + GLT + ++ L+ +G+N+L E+ +S + + L ++
Sbjct: 7 KSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 66
Query: 77 AAAIMAIVL---ANGGGKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPK 133
AA ++ VL G + + I+++L N+ + +E NA NA AL
Sbjct: 67 LAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA 126
Query: 134 TKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKN 193
T+ D P +L E GE L
Sbjct: 127 TE-------------------------QDKTPLQQKLDE-----------FGEQL----- 145
Query: 194 PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSI 253
++ +++ G V + +
Sbjct: 146 -------------SKVISLICVAVWLINIGHFNDPVHGGSWIRGA--------------- 177
Query: 254 AVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 313
+ F + L + IP +P V++ +A+G+ R++++ AI
Sbjct: 178 -IYYFKIAV------------------ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIV 218
Query: 314 KRMTAIEEMAGMDVLCSDKTGTLTLNK 340
+ + ++E + + ++
Sbjct: 219 RSLPSVETLGRAIYNNMKQFIRYLISS 245
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 42.7 bits (100), Expect = 2e-04
Identities = 45/252 (17%), Positives = 82/252 (32%), Gaps = 38/252 (15%)
Query: 628 SVIVSAVLTSRAIFQRMKNYTIYAVSITI-RIVLGFLLVALLWKFDFPPFMILIIAILND 686
+ S RAI+ MK + Y +S + +V FL AL P +L + ++ D
Sbjct: 219 RSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTD 278
Query: 687 GT-------------IMTISKDRVKPSPMPDSWKLKEIFGTGVVLGTYMALVTAFFFWLI 733
G IM R P+ W G +G A++F
Sbjct: 279 GLPATALGFNPPDLDIMDR-PPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYA 337
Query: 734 HDTRFFT--------------NTFNLKEIHEKPDMLSAALYLQVSIISQAL-IFVTRSRS 778
D T F + + L V + + + S +
Sbjct: 338 EDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSEN 397
Query: 779 WSFVERPG---VMLVGAFLVAQLLATIIAVYAKW--EFARIEGIGWGWAGAIWIFSIITY 833
S + P + L+G+ ++ L +I +Y +++ + + S+
Sbjct: 398 QSLMRMPPWVNIWLLGSICLSMSLHFLI-LYVDPLPMIFKLKALDLTQWLMVLKISLP-V 455
Query: 834 LPLDPL-KFVIR 844
+ LD + KF+ R
Sbjct: 456 IGLDEILKFIAR 467
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 87.1 bits (215), Expect = 8e-21
Identities = 43/155 (27%), Positives = 61/155 (39%), Gaps = 31/155 (20%)
Query: 480 EFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 539
D + + ++ +G+ V MITGD + R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 540 LGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 599
P K E VKKLQ K + GDG+NDAPAL
Sbjct: 69 ----------------------------PHQKSEEVKKLQ-AKEVVAFVGDGINDAPALA 99
Query: 600 RADIGIAVADATDAARSASDIVLTEPGLSVIVSAV 634
+AD+GIAV +D A + DIVL L +V+A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 81.7 bits (201), Expect = 4e-19
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 17/112 (15%)
Query: 135 KVLRDEKWSEQE--AEILVPGDIISIKLGDIVPADARLLEGDP--LKIDQAALTGESLPV 190
KV R ++ S Q A +VPGDI+ + +GD VPAD R+L L++DQ+ LTGES+ V
Sbjct: 4 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 63
Query: 191 TKNPGDE-------------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 229
K+ +FSG+ G+ +V TGV T GK +
Sbjct: 64 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 64.5 bits (156), Expect = 4e-12
Identities = 29/148 (19%), Positives = 49/148 (33%), Gaps = 27/148 (18%)
Query: 374 DAIDASIVGMLA----DPKEARAGITEVHFLPFNPVDKRTAITYID--SNGDWHRTSKGA 427
DA +++++ + ++ R +V + FN +K + + KGA
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 428 PEQIIDLCG----------LKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGS 477
PE+I+D C L EM+ G R LG + +P
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 478 P-----------WEFVGLLPLFDPPRHD 494
FVGL+ + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 57.7 bits (138), Expect = 9e-10
Identities = 21/157 (13%), Positives = 45/157 (28%), Gaps = 6/157 (3%)
Query: 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIA 549
R E + + + +I+G + +Y + +
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 134
Query: 550 SMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVAD 609
+ + K ++ +L E M GD V D A K +D+ A
Sbjct: 135 PHSCKGT------CSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY 188
Query: 610 ATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKN 646
+ R + L I + + + + ++N
Sbjct: 189 LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 57.6 bits (138), Expect = 1e-09
Identities = 33/210 (15%), Positives = 64/210 (30%), Gaps = 33/210 (15%)
Query: 302 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFVKGTDSDGLL 361
G + + + + + E+A + LC+D + + + V L
Sbjct: 33 GEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFN------ETKGVYEKVGEATETALT 86
Query: 362 LAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWH 421
+ + + + + A R + + L F+ K ++ +
Sbjct: 87 TLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRA 146
Query: 422 R-----TSKGAPEQIIDLCG----------LKGEMRRKAHQIID--NFAERGLRALGVGR 464
KGAPE +ID C + G ++ K +I LR L +
Sbjct: 147 AVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALAT 206
Query: 465 QTVPEKTKESEGSPWE----------FVGL 484
+ P K +E FVG+
Sbjct: 207 RDTPPKREEMVLDDSSRFMEYETDLTFVGV 236
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.1 bits (121), Expect = 1e-07
Identities = 28/181 (15%), Positives = 56/181 (30%), Gaps = 14/181 (7%)
Query: 449 IDNFAERGLRALGVGRQTVPEKTKESEGSPWEFV-GLLPLFDPPRHDSAETIRRALDLGV 507
+ R + + + E+ + S + + E + R + V
Sbjct: 40 VSEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNV 99
Query: 508 NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVF 567
V +I+G +I + +L + ++ L E +
Sbjct: 100 QVFLISGGFRSIVEHVASKLNIPATNVFANRLKF---------YFNGEYAGFDETQPTAE 150
Query: 568 PEHKYEIVKKLQERKHI--CGMTGDGVNDAPALKRADIGIAVA--DATDAARSASDIVLT 623
K +++K L+E+ H M GDG D A AD I + + +T
Sbjct: 151 SGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT 210
Query: 624 E 624
+
Sbjct: 211 D 211
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 49.7 bits (118), Expect = 2e-07
Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 543 SKDESIASMPVEELIEKADGFAGVFPEHK--YEIVKKLQERKHICGMTGDGVNDAPALKR 600
S +S + F G + ++++K+ GD D PA
Sbjct: 55 SGRDSPILRRRIADLGIKLFFLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAA 114
Query: 601 ADIGIAVADATDAARSASDIVLTEPG 626
AVADA ++A D VL+ G
Sbjct: 115 CGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 48.9 bits (115), Expect = 9e-07
Identities = 15/68 (22%), Positives = 23/68 (33%)
Query: 567 FPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPG 626
+ + L + GDG ND A K +AVA A + +D V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 627 LSVIVSAV 634
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.0 bits (108), Expect = 5e-06
Identities = 11/58 (18%), Positives = 16/58 (27%)
Query: 567 FPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTE 624
+ K + V + + GD ND L A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 45.4 bits (106), Expect = 1e-05
Identities = 13/50 (26%), Positives = 18/50 (36%)
Query: 585 CGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAV 634
+ GD ND P + A+ATD ++ SD V I
Sbjct: 170 ILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIF 219
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 45.2 bits (105), Expect = 1e-05
Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 563 FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVL 622
E +I K GDG ND K+A + IA A + +DI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 623 TEPGLSVIVSAV 634
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 45.4 bits (106), Expect = 2e-05
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 568 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGL 627
++K + GD ND L AVA+ATD+A+S + VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHR 268
Query: 628 SVIVSAVL 635
V+ +L
Sbjct: 269 EGAVAYLL 276
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 42.6 bits (99), Expect = 1e-04
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 544 KDESIASMPVEELIEKADGFAGVFPE--HKYEIVKKLQERKHI----CGMTGDGVNDAPA 597
+ E + S+P E+ FA V + K + + ++ I GDG ND
Sbjct: 158 EKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISM 217
Query: 598 LKRADIGIAVADATDAARSASDIV 621
L+ A IG+A+ A + ++A+D V
Sbjct: 218 LRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 42.6 bits (99), Expect = 1e-04
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 569 EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIV 621
+ L + GD ND ++ A +G+AV +A + + ++ V
Sbjct: 200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.8 bits (97), Expect = 2e-04
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 589 GDGVNDAPALKRADIGIAVADATDAARSASDIV 621
GD +ND L+ A G+A+ +A + +S +D V
Sbjct: 236 GDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 40.7 bits (94), Expect = 5e-04
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 589 GDGVNDAPALKRADIGIAVADATDAARSASDIVLT---EPGLSVIVSAVLTSRAIF 641
GD NDA LK A A+ +A + + + G ++ AVL + F
Sbjct: 213 GDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTYPF 268
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 40.3 bits (93), Expect = 7e-04
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 569 EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIV 621
+ + +++ +K + GD ND + A + +A+ +A + + ASDIV
Sbjct: 193 KALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIV 245
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 949 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.96 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.91 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.91 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.79 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.51 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.17 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.11 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.01 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.95 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.93 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.91 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.81 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.79 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.73 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.68 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.67 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.61 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.6 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.35 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.3 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.16 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.09 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.43 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.42 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.3 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.27 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.18 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.12 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 96.98 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.5 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 95.91 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 95.88 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.66 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 95.65 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.29 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 95.25 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.11 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 94.89 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.85 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.5 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.39 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.32 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 92.75 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 91.52 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 91.28 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 91.15 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 90.89 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 90.63 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 89.9 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 89.82 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 86.34 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 85.17 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 82.74 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=4.6e-36 Score=348.36 Aligned_cols=231 Identities=20% Similarity=0.242 Sum_probs=177.6
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHHcC---C
Q 041450 15 DLERIPVAEVFEQLKCT-PKGLTTAEGEKRLQIFGYNKLEEKK-ESKLLKFLGFMWNPLSWVMEAAAIMAIVLANG---G 89 (949)
Q Consensus 15 ~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~ail~~~l~~~---~ 89 (949)
|+|+.+.||+++.|+++ ++|||++|+++|+++||+|++++++ .++|+.|+++|++|+.++++++++++++++.. .
T Consensus 3 ~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 82 (472)
T d1wpga4 3 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 82 (472)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred ChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhccc
Confidence 78999999999999999 6899999999999999999998765 77889999999999999999999999998742 2
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCeEEEEeccccCCCcEEEEcCCCeecccee
Q 041450 90 GKPPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDEKWSEQEAEILVPGDIISIKLGDIVPADAR 169 (949)
Q Consensus 90 ~~~~~~~~~~~ii~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ 169 (949)
....+|.++++|++++++|+.++++||+|++++++++++..++. ..||++|+|.+
T Consensus 83 ~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-------------------------~~~~~~P~d~~ 137 (472)
T d1wpga4 83 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA-------------------------TEQDKTPLQQK 137 (472)
T ss_dssp STTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------CCCCCCHHHHH
T ss_pred ccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc-------------------------ccccCchHHHH
Confidence 23458999999999999999999999999999999998876554 35788899887
Q ss_pred EEecCCeEEEecCCCCCCceeecCCCCceeeceeEeeccEEEEEEEeCchhhHHhHHHhhhccCCCChHHHHHHHHHHHH
Q 041450 170 LLEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFC 249 (949)
Q Consensus 170 ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~ 249 (949)
+.+ +||+. |.+.++|..+|..|.+|++...+....
T Consensus 138 l~~-----------~g~~i------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 172 (472)
T d1wpga4 138 LDE-----------FGEQL------------------SKVISLICVAVWLINIGHFNDPVHGGS---------------- 172 (472)
T ss_dssp HHH-----------HHHHH------------------HHHHHHHHHHHHHHCCTTSSSCCSSSC----------------
T ss_pred HHH-----------HHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHhhhh----------------
Confidence 643 12221 001111122222222222221111110
Q ss_pred HHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhCCcccccchhhhhhcCceEEE
Q 041450 250 ICSIAVGMFIEIIVMWAIQRRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 329 (949)
Q Consensus 250 ~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~i~ 329 (949)
....+.+.+..++++.++++|++||+++++++++|++||+|+|++||++.++|++|+..+.|
T Consensus 173 ------------------~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~ 234 (472)
T d1wpga4 173 ------------------WIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNN 234 (472)
T ss_dssp ------------------SSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHH
T ss_pred ------------------hHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHH
Confidence 01234455667788889999999999999999999999999999999999888877766666
Q ss_pred eCCC
Q 041450 330 SDKT 333 (949)
Q Consensus 330 ~DKT 333 (949)
+|||
T Consensus 235 ~~k~ 238 (472)
T d1wpga4 235 MKQF 238 (472)
T ss_dssp HHHH
T ss_pred hHHh
Confidence 6665
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.3e-33 Score=280.07 Aligned_cols=148 Identities=40% Similarity=0.561 Sum_probs=132.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC--CccccCCccccccCCchHHHHhHhcceEEee
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSSLLGQSKDESIASMPVEELIEKADGFAGV 566 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~ 566 (949)
||||+|++++|+.|+++||+|||+|||++.||+++|+++||..+... ...+.+.+. +..+..+..+..++..+|||+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREF-DDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHH-HHSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCcccccccccccccc-chhhHHHHhhhhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999754321 111222222 345666788889999999999
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHh
Q 041450 567 FPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTS 637 (949)
Q Consensus 567 sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~g 637 (949)
+|+||..+|+.+|++|++|+|+|||+||+|||++|||||+|++|+++|+++||++|++++|+.++.+|++|
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.96 E-value=1.5e-29 Score=240.85 Aligned_cols=124 Identities=35% Similarity=0.498 Sum_probs=108.9
Q ss_pred EEEEEecCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhc
Q 041450 481 FVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKA 560 (949)
Q Consensus 481 llG~~~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 560 (949)
..+.++++|++|+|++++|+.|+++||+++|+|||+..+|.++|++|||.
T Consensus 12 ~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~------------------------------ 61 (135)
T d2b8ea1 12 GTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------ 61 (135)
T ss_dssp CCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------
T ss_pred eEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh------------------------------
Confidence 34568899999999999999999999999999999999999999999984
Q ss_pred ceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 561 DGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 561 ~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
.+|++++|++|..+|+.+|+. ++|+|+|||.||+|||++|||||+|++++++++++||++|++++|+.|+.+|+
T Consensus 62 ~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 469999999999999999875 68999999999999999999999999999999999999999999999998873
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.91 E-value=3.9e-29 Score=281.75 Aligned_cols=313 Identities=10% Similarity=-0.026 Sum_probs=209.0
Q ss_pred cchhhhhhcCceEEEeCCCCCccCCceEEEEEEEe-----eccCCCChH-HHHHHHHHhcc----ccCCChhHHHHHHhc
Q 041450 315 RMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIE-----VFVKGTDSD-GLLLAAARASR----VENQDAIDASIVGML 384 (949)
Q Consensus 315 ~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~-----~~~~~~~~~-~~l~~~a~~~~----~~~~~~~~~ai~~~~ 384 (949)
-..+.|.||...++|+|||||+|.|+|.+..+..+ ....+.+.+ ++....+.|.. ....++...+++...
T Consensus 29 ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (380)
T d1qyia_ 29 LLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQD 108 (380)
T ss_dssp HHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHCS
T ss_pred HhhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 34566999999999999999999999986432110 001122222 22222222211 122344455555443
Q ss_pred cChh----hhhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHHhhcCchHHHHHHHHHHHHHHHhcCeEE
Q 041450 385 ADPK----EARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIIDLCGLKGEMRRKAHQIIDNFAERGLRAL 460 (949)
Q Consensus 385 ~~~~----~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l 460 (949)
...+ +.+..+.....+||++.+|+|++.....++.+..+.+|+++.+. ..+.....+.+.+.+++++|+|++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~~~~~~~~~~~a~~~~r~l 184 (380)
T d1qyia_ 109 EPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH----VSDATLFSLKGALWTLAQEVYQEW 184 (380)
T ss_dssp SCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----CSCCGGGSTTCHHHHHHHHHHHHH
T ss_pred hhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----CcHHHHHHHHhHHHHHHHHHHHHH
Confidence 3221 23445666678899999999986544333334444566665432 222234455677889999999999
Q ss_pred EEEEeecCCccccCCCCCceEEEEEecCCCCC--cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcc
Q 041450 461 GVGRQTVPEKTKESEGSPWEFVGLLPLFDPPR--HDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSS 538 (949)
Q Consensus 461 ~~a~~~~~~~~~~~~e~~l~llG~~~i~D~lr--~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~ 538 (949)
++|++..++.+.+ ...++...|++..+|++| +|++++++.|+++|++++|+|||+..+|..+++++||.........
T Consensus 185 ~~~~~~~~~~~~~-~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i 263 (380)
T d1qyia_ 185 YLGSKLYEDVEKK-IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFI 263 (380)
T ss_dssp HHHHHHHHHHHCS-CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGE
T ss_pred HHhhhcccccccc-cchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceE
Confidence 9999866433222 222334568888999855 5999999999999999999999999999999999999643222222
Q ss_pred ccCCcc--------ccccCCchHHHHhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCC---ceeEe
Q 041450 539 LLGQSK--------DESIASMPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRAD---IGIAV 607 (949)
Q Consensus 539 l~~~~~--------~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~Ad---VGIam 607 (949)
+.+.+. .......+-.+.+..+..++|++|+||..+|+.++..++.|+|||||+||+||+|+|| |||+|
T Consensus 264 ~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~ 343 (380)
T d1qyia_ 264 ATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLT 343 (380)
T ss_dssp ECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred EecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEec
Confidence 211110 0001111122334445568999999999999999999999999999999999999999 99999
Q ss_pred c-cchHHHHh----cccccccCCChhHHHHHH
Q 041450 608 A-DATDAARS----ASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 608 g-~g~~~a~~----aaDivl~~~~l~~i~~~i 634 (949)
| .|++++++ .||+++ +++..+..++
T Consensus 344 G~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 344 GLKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp BTTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CCCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 8 66665544 799999 6666666554
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.91 E-value=8.2e-25 Score=200.96 Aligned_cols=97 Identities=39% Similarity=0.617 Sum_probs=88.8
Q ss_pred eEEEEeCCeE--EEEeccccCCCcEEEEcCCCeeccceeEEe--cCCeEEEecCCCCCCceeecCC-------------C
Q 041450 133 KTKVLRDEKW--SEQEAEILVPGDIISIKLGDIVPADARLLE--GDPLKIDQAALTGESLPVTKNP-------------G 195 (949)
Q Consensus 133 ~~~V~rdg~~--~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~--g~~~~Vdes~LTGEs~pv~K~~-------------g 195 (949)
.++|+|+|++ ++|+++||+|||+|.|++||+|||||+|++ +..+.||||+|||||.|+.|.+ .
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5799999985 789999999999999999999999999986 4358999999999999999975 3
Q ss_pred CceeeceeEeeccEEEEEEEeCchhhHHhHHHhh
Q 041450 196 DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 229 (949)
Q Consensus 196 ~~v~aGs~v~~G~~~~~Vi~tG~~T~~gki~~l~ 229 (949)
|.+|+||.|.+|+++++|++||.+|.+||+++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 5699999999999999999999999999998753
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.79 E-value=3.8e-19 Score=183.26 Aligned_cols=136 Identities=23% Similarity=0.305 Sum_probs=107.5
Q ss_pred HHHHHHHHhcccc---------------CCChhHHHHHHhc----cChhhhhcCceEEeeccCCCCCccEEEEEEcC--C
Q 041450 359 GLLLAAARASRVE---------------NQDAIDASIVGML----ADPKEARAGITEVHFLPFNPVDKRTAITYIDS--N 417 (949)
Q Consensus 359 ~~l~~~a~~~~~~---------------~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~--~ 417 (949)
.++..+++|+... .++|.+.|++.++ .+....+..++.++.+||+|.+|||+++++.+ +
T Consensus 36 ~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~ 115 (214)
T d1q3ia_ 36 ALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNP 115 (214)
T ss_dssp HHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCT
T ss_pred HHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCC
Confidence 4566677776432 3589999998765 35566788899999999999999999999865 4
Q ss_pred CcEEEEecCchHHHHHhhcC----------chHHHHHHHHHHHHHHHhcCeEEEEEEeecCCcc-----------ccCCC
Q 041450 418 GDWHRTSKGAPEQIIDLCGL----------KGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKT-----------KESEG 476 (949)
Q Consensus 418 g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~-----------~~~~e 476 (949)
+++.+|+|||||.|+++|+. +++.++.+.+.+++|+.+|+|||++|||.++.++ .+..+
T Consensus 116 ~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e 195 (214)
T d1q3ia_ 116 QSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPT 195 (214)
T ss_dssp TSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCC
T ss_pred CceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhc
Confidence 67889999999999999973 5677889999999999999999999999997653 23457
Q ss_pred CCceEEEEEecCCCCCcc
Q 041450 477 SPWEFVGLLPLFDPPRHD 494 (949)
Q Consensus 477 ~~l~llG~~~i~D~lr~~ 494 (949)
++|+|+|+++++||||++
T Consensus 196 ~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 196 EKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp SSEEEEEEEEEESCCSCC
T ss_pred CCCEEEEEEEEEeCCCCC
Confidence 899999999999999985
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.51 E-value=3.2e-15 Score=156.24 Aligned_cols=97 Identities=24% Similarity=0.398 Sum_probs=81.0
Q ss_pred hcCceEEeeccCCCCCccEEEEEEcCCC-----cEEEEecCchHHHHHhhcC----------chHHHHHHHHHHHHH--H
Q 041450 391 RAGITEVHFLPFNPVDKRTAITYIDSNG-----DWHRTSKGAPEQIIDLCGL----------KGEMRRKAHQIIDNF--A 453 (949)
Q Consensus 391 ~~~~~~l~~~pF~s~~kr~sv~~~~~~g-----~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~--a 453 (949)
+..++.++.+||+|.||||+++++.+++ .+.+|+|||||.|+++|+. +++.++.+.+.++++ +
T Consensus 116 ~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 195 (239)
T d1wpga3 116 RQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTG 195 (239)
T ss_dssp HHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTS
T ss_pred hhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHh
Confidence 4678899999999999999999997654 3679999999999999963 456677788888876 6
Q ss_pred HhcCeEEEEEEeecCCccc----------cCCCCCceEEEEEec
Q 041450 454 ERGLRALGVGRQTVPEKTK----------ESEGSPWEFVGLLPL 487 (949)
Q Consensus 454 ~~GlR~l~~a~~~~~~~~~----------~~~e~~l~llG~~~i 487 (949)
++|+|||++|||.++..+. +.+|++|+|+|+++|
T Consensus 196 ~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 196 RDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp SCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred hCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 7999999999999976432 346889999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.17 E-value=4.6e-11 Score=122.09 Aligned_cols=148 Identities=22% Similarity=0.228 Sum_probs=105.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC--ccc-c-------------------------C
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS--SSL-L-------------------------G 541 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~--~~l-~-------------------------~ 541 (949)
.+.+.+.++|++|+++|++++++||+....+...++.+++....... ..+ . +
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 46788999999999999999999999999999999999985421100 000 0 0
Q ss_pred Cc----cc----------cccCCchHHHHhHhcc---------eEEeeC--hhhHHHHHHHHhhc----CCEEEEEcCCc
Q 041450 542 QS----KD----------ESIASMPVEELIEKAD---------GFAGVF--PEHKYEIVKKLQER----KHICGMTGDGV 592 (949)
Q Consensus 542 ~~----~~----------~~~~~~~~~~~~~~~~---------v~ar~s--P~qK~~iV~~lq~~----g~~V~miGDG~ 592 (949)
.. .. .....+.+.++..+.. .+..+. ...|...++.+.++ .+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 00 00 0001112333333221 122233 35788877776553 45699999999
Q ss_pred cCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHHh
Q 041450 593 NDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTS 637 (949)
Q Consensus 593 ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~g 637 (949)
||.+||+.|++||||+++.+.++++||+|+..++...+.+++++-
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999988887553
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.11 E-value=2.3e-10 Score=117.23 Aligned_cols=149 Identities=21% Similarity=0.152 Sum_probs=105.5
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC--ccc-cCC-cccc-----------------
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS--SSL-LGQ-SKDE----------------- 546 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~--~~l-~~~-~~~~----------------- 546 (949)
+.++.+++.+++++|++.|++++++||.+...+..++..+|+....... ..+ ... ....
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 3457789999999999999999999999999999999999985432110 000 000 0000
Q ss_pred ------------------ccCCchHHHHhH---hc--ce-----EEeeCh--hhHHHHHHHHhhc----CCEEEEEcCCc
Q 041450 547 ------------------SIASMPVEELIE---KA--DG-----FAGVFP--EHKYEIVKKLQER----KHICGMTGDGV 592 (949)
Q Consensus 547 ------------------~~~~~~~~~~~~---~~--~v-----~ar~sP--~qK~~iV~~lq~~----g~~V~miGDG~ 592 (949)
....+..+.+.. .. .+ +..+.| ..|...++.+.++ ...|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 011111222111 11 11 233444 4898888877653 23588999999
Q ss_pred cCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHH
Q 041450 593 NDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 593 ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~ 636 (949)
||.+|++.|++||||+++.+.+++.||+++..++..++.+++++
T Consensus 178 nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999888754
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.01 E-value=3.2e-10 Score=111.56 Aligned_cols=100 Identities=25% Similarity=0.246 Sum_probs=83.0
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhhHHHHHH
Q 041450 497 ETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEHKYEIVK 576 (949)
Q Consensus 497 ~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~ 576 (949)
.+|+.|+..|+.+.++||++...+...++++++.. ++. ...+|...++
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------------------------------~~~--~~~~K~~~l~ 86 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFL--GKLEKETACF 86 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEE--SCSCHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------------------------------ccc--ccccHHHHHH
Confidence 47999999999999999999999999999999742 122 2345655555
Q ss_pred HHhh-c---CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChh
Q 041450 577 KLQE-R---KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLS 628 (949)
Q Consensus 577 ~lq~-~---g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~ 628 (949)
.+.+ . ...|+++|||.||.|||+.|++|+||++|.+.+++.||+|+..++=.
T Consensus 87 ~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~ 142 (177)
T d1k1ea_ 87 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGK 142 (177)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTT
T ss_pred HHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCC
Confidence 5443 2 36799999999999999999999999999999999999999887633
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.95 E-value=2.9e-10 Score=116.09 Aligned_cols=122 Identities=20% Similarity=0.174 Sum_probs=89.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc----cCCccccccCCchHHHHhHhcceEEe
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL----LGQSKDESIASMPVEELIEKADGFAG 565 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~v~ar 565 (949)
+++|++.+.|+.|++.|++++++||.....+..+++.+|+.........+ .|.... .. ....-
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g-~~------------~~~p~ 148 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAG-FD------------ETQPT 148 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEE-EC------------TTSGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhcccc-ce------------eeeee
Confidence 37899999999999999999999999999999999999996321100000 010000 00 00011
Q ss_pred eChhhHHHHHHHHhhc--CCEEEEEcCCccCHHhhhcCCceeEec--cchHHHHhcccccccC
Q 041450 566 VFPEHKYEIVKKLQER--KHICGMTGDGVNDAPALKRADIGIAVA--DATDAARSASDIVLTE 624 (949)
Q Consensus 566 ~sP~qK~~iV~~lq~~--g~~V~miGDG~ND~~aLk~AdVGIamg--~g~~~a~~aaDivl~~ 624 (949)
..+..|.++++.++++ -..|.|+|||.||++|++.|++|||++ ......++.||+++.+
T Consensus 149 ~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 149 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp GSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred eccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC
Confidence 3467899999999864 246899999999999999999999997 3445666789988843
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.93 E-value=3.2e-10 Score=115.86 Aligned_cols=148 Identities=13% Similarity=0.059 Sum_probs=106.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+....+............ ..........+++..|+
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~------~~~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIH------IDWPHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCE------EECTTCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcce------eccccccccccccCCHH
Confidence 478999999999999999999999999999999999998754322111111100000 00000011235677899
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhc-ccccccCCChhHHHHHHHHhHHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSA-SDIVLTEPGLSVIVSAVLTSRAIFQRM 644 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~a-aDivl~~~~l~~i~~~i~~gR~~~~~i 644 (949)
.|..+++.++..++.|.|+||+.||.+|+++||+++|++...+.+++. .+++- -++|+.|...+..-..+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998665555443 33332 368888888887666555444
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.91 E-value=1.9e-09 Score=113.20 Aligned_cols=71 Identities=21% Similarity=0.228 Sum_probs=60.6
Q ss_pred eeChh--hHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 565 GVFPE--HKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 565 r~sP~--qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
..+|. .|...|+.+.+. ...++++|||.||.+||+.|+.|+||+++.+..++.||+++..++-.++.++++
T Consensus 190 ~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 190 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 35565 699999888764 235899999999999999999999999999999999999998877778887774
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.81 E-value=1.3e-09 Score=114.29 Aligned_cols=72 Identities=19% Similarity=0.235 Sum_probs=61.8
Q ss_pred EeeChh--hHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 564 AGVFPE--HKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 564 ar~sP~--qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
-.++|. .|..-++.++++ | ..|.++|||.||.|||+.|+.|+||++|.+.+|+.||+|+..++-.++...|+
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 456665 599999888764 3 35899999999999999999999999999999999999998888888877774
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.79 E-value=3.7e-09 Score=111.66 Aligned_cols=71 Identities=21% Similarity=0.279 Sum_probs=61.2
Q ss_pred eeChh--hHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 565 GVFPE--HKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 565 r~sP~--qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
.++|. .|..-++.+.+. ...|+++|||.||.+||+.|+.||||++|++.+++.||+++..++-+++.++++
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 35554 799988888764 235999999999999999999999999999999999999998888888888774
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.73 E-value=2.3e-08 Score=99.48 Aligned_cols=130 Identities=15% Similarity=0.148 Sum_probs=93.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
+..++....++.+ +.+.++..+|+.............++.............. .........+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~~~~~~~~ 132 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---------------RVVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS---------------CEEEEECCSSS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc---------------ccccccccchh
Confidence 3556666666665 5789999999999999999999988753211100000000 01123444566
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~ 636 (949)
.+...++.++.....|+|+|||.||.+||+.|++||||+...++.++++|++.. .++..++.++..
T Consensus 133 ~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred hHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 677788888888999999999999999999999999997667777788888775 567777766543
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.68 E-value=8.5e-09 Score=107.65 Aligned_cols=73 Identities=26% Similarity=0.291 Sum_probs=62.0
Q ss_pred EeeChh--hHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHHH
Q 041450 564 AGVFPE--HKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 564 ar~sP~--qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~~ 636 (949)
..+.|. .|..-++.+.++ ...++++|||.||.+||+.|+.||||++|++.+|+.||+|...++-.++.+++++
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 445554 698888888653 3468899999999999999999999999999999999999888888888888854
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.67 E-value=1.1e-08 Score=102.10 Aligned_cols=130 Identities=22% Similarity=0.260 Sum_probs=91.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe--e
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG--V 566 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar--~ 566 (949)
.++.+++.+.++.++..|..+.++||.....+....++.+....... .+...... ....... .
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------------~~~~~~~~~~ 138 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVKDGK-------------LTGDVEGEVL 138 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEETTE-------------EEEEEECSSC
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhh--hhcccccc-------------cccccccccc
Confidence 46788999999999999999999999999999999999887532110 00000000 0000000 1
Q ss_pred ChhhHHH----HHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHH
Q 041450 567 FPEHKYE----IVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 567 sP~qK~~----iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
.+..|.. +.+.++-..+.|.++|||.||.+|++.|++|||| ++.+..++.||+++-.+++..++..|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp STTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred ccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 1222333 3333333455689999999999999999999999 78888999999999888888877654
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.61 E-value=2.4e-08 Score=104.77 Aligned_cols=65 Identities=28% Similarity=0.320 Sum_probs=51.9
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCC-hhHHHHHH
Q 041450 570 HKYEIVKKLQER----KHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPG-LSVIVSAV 634 (949)
Q Consensus 570 qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~-l~~i~~~i 634 (949)
.|..-++.+.+. ...|+++|||.||.+||+.|+.|++|++|.+.+++.||+++..++ -..+..++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l 276 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLL 276 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHH
Confidence 566666666543 346999999999999999999999999999999999999997554 33454444
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.60 E-value=6.2e-08 Score=101.32 Aligned_cols=72 Identities=25% Similarity=0.294 Sum_probs=61.0
Q ss_pred EeeChh--hHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccCCChhHHHHHHH
Q 041450 564 AGVFPE--HKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 564 ar~sP~--qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
..++|. .|..-|+.+.++ | ..|+++|||.||.|||+.|++||||++|.+.+|+.||+++.+++-.++.++|+
T Consensus 182 ~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred eeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 345664 688888877653 2 34888999999999999999999999999999999999999888888888774
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.35 E-value=4.5e-07 Score=92.41 Aligned_cols=44 Identities=14% Similarity=0.090 Sum_probs=39.6
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGT 531 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~ 531 (949)
.+...+.+.++|++|+++|+++++.||.+...+..+.+++|+..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 44556789999999999999999999999999999999999854
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.30 E-value=7.1e-07 Score=91.54 Aligned_cols=69 Identities=19% Similarity=0.159 Sum_probs=56.2
Q ss_pred hhhHHHHHHHHhhc-C---CEEEEEcCCccCHHhhhcCCceeEeccchHHHHhccc-------ccccCCChhHHHHHHHH
Q 041450 568 PEHKYEIVKKLQER-K---HICGMTGDGVNDAPALKRADIGIAVADATDAARSASD-------IVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 568 P~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaD-------ivl~~~~l~~i~~~i~~ 636 (949)
...|...++.+.++ | ..|.++|||.||.+||+.|+.|++|+++.+..++.|| ++-..++..++.+++++
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 35799999988775 2 3488999999999999999999999999999999888 45555566677777654
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.16 E-value=6.5e-06 Score=82.65 Aligned_cols=41 Identities=17% Similarity=0.085 Sum_probs=38.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMG 530 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 530 (949)
.+.+.+.++|++|+++|+.+++.||.+...+..+.+++|+.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 36688999999999999999999999999999999999985
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.09 E-value=5.4e-06 Score=77.11 Aligned_cols=128 Identities=21% Similarity=0.266 Sum_probs=90.6
Q ss_pred EEEEEEeeccCCCChHHHHHHHHHhccccCCChhHHHHHHhccChhh---hhcCceEEeeccCCCCCccEEEEEEcCCCc
Q 041450 343 VDKSLIEVFVKGTDSDGLLLAAARASRVENQDAIDASIVGMLADPKE---ARAGITEVHFLPFNPVDKRTAITYIDSNGD 419 (949)
Q Consensus 343 v~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~---~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~ 419 (949)
++++++ ..|.++++++.+||.++..+. ||+.+||+.++..... ...........||....+...+. .+|
T Consensus 4 ~td~ip---~~G~~~~ell~~AA~aE~~Se-HPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~g- 75 (136)
T d2a29a1 4 ASEFIP---AQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGIN---IDN- 75 (136)
T ss_dssp EEEEEE---CTTCCHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEE---ETT-
T ss_pred cceEEe---CCCCCHHHHHHHHHHHhCCCC-chHHHHHHHHHHHhcCCCccccccccccccccccccceEEEE---ECC-
Confidence 455543 468999999999999887665 9999999998753211 11223333456666665544332 256
Q ss_pred EEEEecCchHHHHHhhcCc-hHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEecCCCCC
Q 041450 420 WHRTSKGAPEQIIDLCGLK-GEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPLFDPPR 492 (949)
Q Consensus 420 ~~~~~KGa~e~il~~~~~~-~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i~D~lr 492 (949)
..+..|++..+.+.+... ..++..+.+.+++++.+|..++.+|... +++|++++.|++|
T Consensus 76 -~~v~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 76 -RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp -EEEEEECHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred -EEEEecHHHHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-------------EEEEEEEEEeecC
Confidence 467789998876654321 2345677788899999999999999855 8999999999986
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.43 E-value=0.00011 Score=73.56 Aligned_cols=122 Identities=14% Similarity=0.199 Sum_probs=79.6
Q ss_pred CCcchHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe-eCh
Q 041450 491 PRHDSAETIRRALDLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG-VFP 568 (949)
Q Consensus 491 lr~~~~~~I~~l~~aG-I~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar-~sP 568 (949)
+-||+.++++.|++.| +++.++||.....+...-+..|+.... . ..+.+... ..+ -.|
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f-d-~i~~~~~~------------------~~~k~~p 151 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADDA------------------LDRNELP 151 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTTC------------------SSGGGHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccc-c-cccccccc------------------ccccchh
Confidence 4689999999999987 899999999999999999999986421 1 11111000 000 011
Q ss_pred hhHHHHHHHHhh---cCCEEEEEcCCccCHHhhhcCCce---eEecc--chHHHHhcccccccCCChhHHHHHH
Q 041450 569 EHKYEIVKKLQE---RKHICGMTGDGVNDAPALKRADIG---IAVAD--ATDAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 569 ~qK~~iV~~lq~---~g~~V~miGDG~ND~~aLk~AdVG---Iamg~--g~~~a~~aaDivl~~~~l~~i~~~i 634 (949)
+--...++.+.. ....++||||+.+|..|-+.|++. |+-|. ..+..+..+|+++ ++++.+...+
T Consensus 152 ~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l 223 (228)
T d2hcfa1 152 HIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVL 223 (228)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHH
T ss_pred HHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHH
Confidence 212223333332 235699999999999999999964 33342 2333445689998 5666666655
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.42 E-value=2.6e-05 Score=78.30 Aligned_cols=53 Identities=19% Similarity=0.298 Sum_probs=46.5
Q ss_pred hHHHHHHHHhhc-CCEEEEEcC----CccCHHhhhcCC-ceeEeccchHHHHhcccccc
Q 041450 570 HKYEIVKKLQER-KHICGMTGD----GVNDAPALKRAD-IGIAVADATDAARSASDIVL 622 (949)
Q Consensus 570 qK~~iV~~lq~~-g~~V~miGD----G~ND~~aLk~Ad-VGIamg~g~~~a~~aaDivl 622 (949)
.|..-++.|.+. ...|.++|| |.||.+||+.|+ .|+||+++.|.++..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 688888888764 457999999 569999999997 69999999999999999986
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.30 E-value=8.9e-05 Score=73.76 Aligned_cols=59 Identities=10% Similarity=0.222 Sum_probs=44.0
Q ss_pred EEeeChh--hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccccccC
Q 041450 563 FAGVFPE--HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTE 624 (949)
Q Consensus 563 ~ar~sP~--qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~ 624 (949)
+-.+.|. .|..-++.+.++.. +.++||+.||.+|++.|+-|+||+.|. ++.+|++.+.+
T Consensus 150 ~idi~p~g~~Kg~al~~l~~~~~-~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~~ 210 (229)
T d1u02a_ 150 IIELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVAD 210 (229)
T ss_dssp EEEEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEESS
T ss_pred EEEEecCCCCHHHHHHHHhcccc-ceeecCCCChHHHHhccCCeEEEEeCC--CCccCeEEcCC
Confidence 3345553 79999999987754 668899999999999998777765332 24578888753
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.27 E-value=0.00013 Score=76.20 Aligned_cols=132 Identities=11% Similarity=0.054 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCC---CCCc-cccCCccccccCCchHHHHhHhcceEEe
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNM---YPSS-SLLGQSKDESIASMPVEELIEKADGFAG 565 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~---~~~~-~l~~~~~~~~~~~~~~~~~~~~~~v~ar 565 (949)
++|+|+++.++.|++.|+++.++||--......+.+++|+.... +.+. ...+........+. -
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~-------------~ 201 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGE-------------L 201 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSS-------------C
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCC-------------c
Confidence 48999999999999999999999999999999999999986421 1000 00010000000000 0
Q ss_pred eChhhHHHHH----HHHh--hcCCEEEEEcCCccCHHhhhc---CCceeEec--c-----chHHHHhcccccccCCChhH
Q 041450 566 VFPEHKYEIV----KKLQ--ERKHICGMTGDGVNDAPALKR---ADIGIAVA--D-----ATDAARSASDIVLTEPGLSV 629 (949)
Q Consensus 566 ~sP~qK~~iV----~~lq--~~g~~V~miGDG~ND~~aLk~---AdVGIamg--~-----g~~~a~~aaDivl~~~~l~~ 629 (949)
.....|...+ ..++ .....|.++|||+||..|.+. ++.++++| + .-+.=+++-|||+.+|.--.
T Consensus 202 i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~ 281 (291)
T d2bdua1 202 IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLE 281 (291)
T ss_dssp CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCH
T ss_pred cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChh
Confidence 1122232222 1112 234578899999999999874 34555553 1 12233467899988776555
Q ss_pred HHHHH
Q 041450 630 IVSAV 634 (949)
Q Consensus 630 i~~~i 634 (949)
++..+
T Consensus 282 v~~~i 286 (291)
T d2bdua1 282 VVNSI 286 (291)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.18 E-value=0.0004 Score=70.76 Aligned_cols=101 Identities=15% Similarity=0.106 Sum_probs=70.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.++++.|++.|+++.++||.+...+..+-++.|+..... ...+.+.... ...-.|+
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~-d~~~~~d~~~-----------------~~KP~p~ 160 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP-DFLVTPDDVP-----------------AGRPYPW 160 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC-SCCBCGGGSS-----------------CCTTSSH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccc-cccccccccc-----------------ccccChH
Confidence 578999999999999999999999999999999999999853211 1111111000 1112344
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCccCHHhhhcCCce-eEec
Q 041450 570 HKYEIVKKLQER-KHICGMTGDGVNDAPALKRADIG-IAVA 608 (949)
Q Consensus 570 qK~~iV~~lq~~-g~~V~miGDG~ND~~aLk~AdVG-Iamg 608 (949)
.=....+.+.-. ...|+||||..+|+.+=+.|++- |++.
T Consensus 161 ~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~ 201 (257)
T d1swva_ 161 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVI 201 (257)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEc
Confidence 444555555532 35699999999999999999973 5553
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.12 E-value=9.8e-05 Score=73.34 Aligned_cols=123 Identities=18% Similarity=0.117 Sum_probs=83.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.|++++.++.|++.|+++.++||.....+..+.+++|+..... ..+...... ...-.|+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~-----------------~~kp~p~ 155 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS--EMLGGQSLP-----------------EIKPHPA 155 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECTTTSS-----------------SCTTSSH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcc--ccccccccc-----------------cccccch
Confidence 467999999999999999999999999999999999999853211 111111000 1111234
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc-eeEecc----chHHHHhcccccccCCChhHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADI-GIAVAD----ATDAARSASDIVLTEPGLSVIVSA 633 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~----g~~~a~~aaDivl~~~~l~~i~~~ 633 (949)
--..+.+.++-....++|+||..+|..+-+.|++ .|.+.. ..+.....+|+++ ++++.++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~i 222 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKI 222 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGG
T ss_pred hhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHh
Confidence 3444555555566779999999999999999997 455532 1223444588887 466655543
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=96.98 E-value=0.00039 Score=68.79 Aligned_cols=115 Identities=17% Similarity=0.197 Sum_probs=77.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.++++.|++.|+++.++|+.....+..+.+..|+.... ...+.+.... .+.-.|+
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F--~~i~~~~~~~-----------------~~Kp~~~ 148 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKLP-----------------YSKPHPQ 148 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTSS-----------------CCTTSTH
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccc--cccccccccc-----------------cchhhHH
Confidence 35699999999999999999999999999999999999995321 1111111100 1112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEecc--c-hHHHHhccccccc
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVAD--A-TDAARSASDIVLT 623 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~--g-~~~a~~aaDivl~ 623 (949)
-=..+.+.+.-....++|+||..+|+.|-+.|++. |++.. . .+.....||+++.
T Consensus 149 ~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~ 206 (218)
T d1te2a_ 149 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS 206 (218)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS
T ss_pred HHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEEC
Confidence 33445555554566799999999999999999974 44432 1 2222346787773
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.50 E-value=0.00066 Score=66.58 Aligned_cols=119 Identities=9% Similarity=0.028 Sum_probs=79.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.+++.+.++.++..| ++.++|+.....+..+.+.+|+.... ..++.+. -.....|+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f--d~v~~~~-------------------~~~~~~p~ 141 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF--DGIYGSS-------------------PEAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEEC-------------------SSCCSHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc--ccccccc-------------------cccccccc
Confidence 46789999999999775 89999999999999999999986321 0111000 01122344
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc-eeEe--c--cchHHHHhcccccccCCChhHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADI-GIAV--A--DATDAARSASDIVLTEPGLSVIVS 632 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIam--g--~g~~~a~~aaDivl~~~~l~~i~~ 632 (949)
.-..+.+.++-....++||||+.||..|-+.|++ .|++ | ...+.....+|+++ +++..+..
T Consensus 142 ~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~ 207 (210)
T d2ah5a1 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLA 207 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHH
T ss_pred ccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHH
Confidence 3344444444445679999999999999999998 5555 3 22333444589987 45655554
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=95.91 E-value=0.012 Score=56.24 Aligned_cols=134 Identities=18% Similarity=0.137 Sum_probs=75.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHH---------------HHHHHHHhCCCCCCCCCccccCCccccccCCchHHH
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAI---------------GKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEE 555 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~t---------------A~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~ 555 (949)
+-||+.++++.|+++|+++.++|...... ........|+.... ..+.....+ .....
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~cp~~p~-----~~~~~ 99 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDG---IYYCPHHPQ-----GSVEE 99 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSE---EEEECCBTT-----CSSGG
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccc---eeecccccc-----ccccc
Confidence 44899999999999999999999865210 01111112221100 000000000 00000
Q ss_pred HhHhcceEEeeChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce--eEecc---chHHHHhcccccccCCChhHH
Q 041450 556 LIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG--IAVAD---ATDAARSASDIVLTEPGLSVI 630 (949)
Q Consensus 556 ~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG--Iamg~---g~~~a~~aaDivl~~~~l~~i 630 (949)
......+..=.|.-=..+.+.+.-....+.||||..+|..|=+.|+++ +.+.. -.+.....||+++ +++..+
T Consensus 100 -~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl 176 (182)
T d2gmwa1 100 -FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 176 (182)
T ss_dssp -GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred -ccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHH
Confidence 000001112233333455566655555689999999999999999995 44432 2345566799998 678888
Q ss_pred HHHHH
Q 041450 631 VSAVL 635 (949)
Q Consensus 631 ~~~i~ 635 (949)
++.|+
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 87764
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.88 E-value=0.0032 Score=61.16 Aligned_cols=101 Identities=16% Similarity=0.102 Sum_probs=67.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.++++.|++.|+++.++|+... .+..+-++.|+.... ..+.+.... ....-.|+
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f---~~i~~s~~~----------------~~~Kp~~~ 141 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF---TEILTSQSG----------------FVRKPSPE 141 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE---EEEECGGGC----------------CCCTTSSH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccc---ccccccccc----------------cccchhHH
Confidence 3679999999999999999999998554 556778889985321 011111000 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccc
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADA 610 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g 610 (949)
-=..+.+.+.-....|+||||+.+|..+-+.|++. |++..+
T Consensus 142 ~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~ 183 (204)
T d2go7a1 142 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLES 183 (204)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCC
T ss_pred HHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence 33445555554456799999999999999999984 455544
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.66 E-value=0.0038 Score=58.84 Aligned_cols=94 Identities=14% Similarity=0.048 Sum_probs=64.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC-hHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeC-
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVF- 567 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~-~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~s- 567 (949)
++.||+.++++.|++.|+++.++|+-+ ...+...-+..++..... .+++.-.
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~--------------------------~~~~~~kp 99 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI--------------------------QREIYPGS 99 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS--------------------------EEEESSSC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce--------------------------eeecccCC
Confidence 478999999999999999999999654 456666666666532110 0122222
Q ss_pred -hhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc-eeEecc
Q 041450 568 -PEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADI-GIAVAD 609 (949)
Q Consensus 568 -P~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~ 609 (949)
|+.-..+.+.+.-....++|+||..+|+.+-++|++ .|.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~ 143 (164)
T d1u7pa_ 100 KVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRD 143 (164)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSS
T ss_pred ChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 233334455554455679999999999999999988 344543
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.65 E-value=0.0069 Score=59.96 Aligned_cols=124 Identities=18% Similarity=0.134 Sum_probs=78.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+.++++.|+ .|+++.++|+..........+.+|+.... . .++... +. ..+.-.|+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~f-d-~i~~s~------------~~-----~~~KP~~~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLF-D-SITTSE------------EA-----GFFKPHPR 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGC-S-EEEEHH------------HH-----TBCTTSHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccc-c-cccccc------------cc-----cccchhhH
Confidence 46899999999996 58999999999888899999999985321 1 011000 00 01111121
Q ss_pred hHHHHHHHHhhcCCEEEEEcCC-ccCHHhhhcCCcee-Eec--cchHHHHhcccccccCCChhHHHHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDG-VNDAPALKRADIGI-AVA--DATDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG-~ND~~aLk~AdVGI-amg--~g~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
-=..+.+.+.-....++|+||. .||+.+-++|++-. .+. .........+|+++ .+++.++.+++
T Consensus 160 ~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred HHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE--CCHHHHHHHHH
Confidence 1123334443344569999997 69999999998853 332 22222344679887 56777777764
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.29 E-value=0.0014 Score=64.13 Aligned_cols=118 Identities=10% Similarity=0.053 Sum_probs=75.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhh
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEH 570 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 570 (949)
+.||+.+.++.|++ ++++.++|+-....+..+.++.|+.... ...+ +.... ....-.|+-
T Consensus 83 ~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f--~~i~-~~~~~----------------~~~KP~p~~ 142 (207)
T d2hdoa1 83 LYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM--AVTI-SADDT----------------PKRKPDPLP 142 (207)
T ss_dssp ECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGE--EEEE-CGGGS----------------SCCTTSSHH
T ss_pred cccchhhhhhhhcc-cccccccccccccccccccccccccccc--cccc-ccccc----------------ccchhhhhh
Confidence 66899999999975 7999999999999999999998875321 0011 00000 011112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEe---ccchHHHHhcccccccCCChhHH
Q 041450 571 KYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAV---ADATDAARSASDIVLTEPGLSVI 630 (949)
Q Consensus 571 K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam---g~g~~~a~~aaDivl~~~~l~~i 630 (949)
-..+++.++-....|+||||..+|+.+-++|++.... |..+....+.+|+++ .++..|
T Consensus 143 ~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dl 203 (207)
T d2hdoa1 143 LLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDI 203 (207)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGG
T ss_pred hcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEe--CCHHHH
Confidence 3445555543445699999999999999999987543 322333344677776 344443
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.25 E-value=0.02 Score=50.30 Aligned_cols=104 Identities=17% Similarity=0.178 Sum_probs=68.3
Q ss_pred CCChHHHHHHHHHhccccCCChhHHHHHHhccChhhhhcCceEEeeccCCCCCccEEEEEEcCCCcEEEEecCchHHHHH
Q 041450 354 GTDSDGLLLAAARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRTSKGAPEQIID 433 (949)
Q Consensus 354 ~~~~~~~l~~~a~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~ 433 (949)
+.++++++.+++.....++ ||+++|++.++.+..-........+..|-.. + .|+ .+.-|+++.+.+
T Consensus 9 ~~~e~elL~~aaslE~~S~-HPlA~AIv~~a~~~~~~~~~~~~~~~~~G~G------i-----~g~--~v~vG~~~~~~~ 74 (113)
T d2b8ea2 9 NGDERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPEKVEVIAGEG------V-----VAD--GILVGNKRLMED 74 (113)
T ss_dssp SSCHHHHHHHHHHHTTTCC-SHHHHHHHHHHHTTTCCCCCCSCEEEETTTE------E-----EET--TEEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHCcCC-CchHHHHHHHHHHhcCCCCccccceeeccce------E-----EeE--EEEECcHHHHHh
Confidence 3578899998888777666 9999999998865332112222222222111 1 011 144599988765
Q ss_pred hhcCchHHHHHHHHHHHHHHHhcCeEEEEEEeecCCccccCCCCCceEEEEEec
Q 041450 434 LCGLKGEMRRKAHQIIDNFAERGLRALGVGRQTVPEKTKESEGSPWEFVGLLPL 487 (949)
Q Consensus 434 ~~~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~llG~~~i 487 (949)
..- .+++.+.+.++.+..+|..++.++... +++|++++
T Consensus 75 ~~~---~~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 75 FGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred cCC---CCCHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEE
Confidence 321 234566778889999999999999865 78999876
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.11 E-value=0.027 Score=53.65 Aligned_cols=109 Identities=14% Similarity=0.037 Sum_probs=67.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
++.||+++.++.|++.|+++.++|+-+..+. +.-+.+|+.... ...+.+.... ...-.|+
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~ 138 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYF--TEVVTSSSGF-----------------KRKPNPE 138 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGE--EEEECGGGCC-----------------CCTTSCH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccccc--cccccccccc-----------------ccCCCHH
Confidence 4679999999999999999999998766554 567788875321 1111110000 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeEeccchHHHHhcccc
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDI 620 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDi 620 (949)
--..+.+.+. -..++|+||..+|..+-++|++=...-++..-.++.-||
T Consensus 139 ~~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 139 SMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHHcC--CCCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 2223334333 234899999999999999998864333445556666554
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=94.89 E-value=0.015 Score=57.41 Aligned_cols=100 Identities=16% Similarity=0.028 Sum_probs=67.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
-.+.||+.+++++|++.|+++.++|+..........+.+|+..-.. ...... +. ....+-.|
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~-~~~~~~---d~--------------~~~~KP~p 187 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILE-LVDGHF---DT--------------KIGHKVES 187 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGG-GCSEEE---CG--------------GGCCTTCH
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhh-hcceee---cc--------------ccccCCCc
Confidence 3478999999999999999999999999999888888888753211 000000 00 00111122
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeE
Q 041450 569 EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIA 606 (949)
Q Consensus 569 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa 606 (949)
+-=....+.+.-....|+|+||..+|+.+-++|++-..
T Consensus 188 ~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti 225 (253)
T d1zs9a1 188 ESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVA 225 (253)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEE
Confidence 22233444454445679999999999999999999543
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.85 E-value=0.0081 Score=55.15 Aligned_cols=95 Identities=14% Similarity=0.006 Sum_probs=59.8
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChH----HHHHHHHH-------hCCCCCCCCCccccCCccccccCCchHHHH
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQLA----IGKETGRR-------LGMGTNMYPSSSLLGQSKDESIASMPVEEL 556 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~----tA~~ia~~-------~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~ 556 (949)
+|++.|++.+.++.|++.|+++.++||-... |...+... .+... ......
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~-----~~~~~~-------------- 94 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL-----VMQCQR-------------- 94 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC-----SEEEEC--------------
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcE-----EEeecc--------------
Confidence 5789999999999999999999999997632 11111110 00000 000000
Q ss_pred hHhcceEEeeChhhHHHHHHHHhhcC-CEEEEEcCCccCHHhhhcCCce
Q 041450 557 IEKADGFAGVFPEHKYEIVKKLQERK-HICGMTGDGVNDAPALKRADIG 604 (949)
Q Consensus 557 ~~~~~v~ar~sP~qK~~iV~~lq~~g-~~V~miGDG~ND~~aLk~AdVG 604 (949)
..--.|-.+.-|..+.+.+...+ .+++|+||-..|+.|.+++++=
T Consensus 95 ---~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 95 ---EQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp ---CTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ---cccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 00001122456777877776654 4568899999999999999883
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.50 E-value=0.015 Score=56.79 Aligned_cols=142 Identities=15% Similarity=0.188 Sum_probs=91.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCc-cccCCc----ccc----------ccC------
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS-SLLGQS----KDE----------SIA------ 549 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~-~l~~~~----~~~----------~~~------ 549 (949)
+-||+.++++.+++. ...+++|---.+-..++|+.+|+..+.+... .+.... .++ ..+
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e 160 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFR 160 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHH
Confidence 458999999999877 5677777777888999999999963311110 000000 000 000
Q ss_pred -------CchHHHHhHhcceEEeeChhhHHHHHHHHhhc-C-CEEEEEcCCccCHHhhhcCCc--eeEec-cchHHHHhc
Q 041450 550 -------SMPVEELIEKADGFAGVFPEHKYEIVKKLQER-K-HICGMTGDGVNDAPALKRADI--GIAVA-DATDAARSA 617 (949)
Q Consensus 550 -------~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~-g-~~V~miGDG~ND~~aLk~AdV--GIamg-~g~~~a~~a 617 (949)
..+..++++++... --..|..+++..-+. + ..-+.+||.+.|+.||+.|.= |+|++ +|.+-|...
T Consensus 161 ~~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~e 237 (308)
T d1y8aa1 161 KLDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKH 237 (308)
T ss_dssp HHHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTT
T ss_pred HHHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccccc
Confidence 11111222222222 125667766654332 2 123789999999999999865 89998 999988889
Q ss_pred ccccccCCChhHHHHHHHH
Q 041450 618 SDIVLTEPGLSVIVSAVLT 636 (949)
Q Consensus 618 aDivl~~~~l~~i~~~i~~ 636 (949)
||+++.+++...+...+..
T Consensus 238 A~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 238 ADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp CSEEEECSSTHHHHHHHHH
T ss_pred cceEEeccchhHHHHHHHH
Confidence 9999999988777666643
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.39 E-value=0.023 Score=56.47 Aligned_cols=123 Identities=11% Similarity=0.114 Sum_probs=77.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChhh
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPEH 570 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 570 (949)
+.||+.++++.|++ |+++.++|+.........-+++|+.... ...+...... .+.-.|+=
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~i~~s~~~~-----------------~~KP~p~~ 169 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQK-----------------EEKPAPSI 169 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGSS-----------------SCTTCHHH
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccc--cccccccccc-----------------cchhhhhh
Confidence 67999999999985 8999999999999999999999985321 1111110000 01111111
Q ss_pred HHHHHHHHhhcCCEEEEEcCCc-cCHHhhhcCCce-eEec--cc--hHHHHhcccccccCCChhHHHHHHH
Q 041450 571 KYEIVKKLQERKHICGMTGDGV-NDAPALKRADIG-IAVA--DA--TDAARSASDIVLTEPGLSVIVSAVL 635 (949)
Q Consensus 571 K~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdVG-Iamg--~g--~~~a~~aaDivl~~~~l~~i~~~i~ 635 (949)
=..+.+.+.-....++||||.. +|+.+-+.|++. +..- .+ .......+|+++ +++..+..+++
T Consensus 170 ~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~ 238 (247)
T d2gfha1 170 FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHH
T ss_pred HHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEE--CCHHHHHHHHH
Confidence 1233344433345699999996 899999999996 5431 11 111223478877 46777776664
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.32 E-value=0.028 Score=54.65 Aligned_cols=91 Identities=19% Similarity=0.249 Sum_probs=64.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC----hHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEee
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGV 566 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~----~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~ 566 (949)
+-+++.+.++.+++.|++|+.+||.. ..|+++.-+.+|+.........+.+.. -
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~----------------------~ 144 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK----------------------P 144 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC----------------------T
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC----------------------C
Confidence 56799999999999999999999975 357788878889864322211121111 0
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc-eeEe
Q 041450 567 FPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADI-GIAV 607 (949)
Q Consensus 567 sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIam 607 (949)
..+.|.+.|+. -.+++++||..+|..+-.+|++ +|-+
T Consensus 145 ~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 145 GQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp TCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 11345566553 3589999999999999999986 5655
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=92.75 E-value=0.054 Score=52.56 Aligned_cols=101 Identities=8% Similarity=-0.015 Sum_probs=64.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
.++-||+.+.++.|++.|+++.++|+... +...-+..|+.... + ..+.+.... ...-.|
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f-~-~i~~~~~~~-----------------~~KP~~ 148 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYF-D-AIADPAEVA-----------------ASKPAP 148 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGC-S-EECCTTTSS-----------------SCTTST
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccc-c-ccccccccc-----------------ccccCh
Confidence 45778999999999999999999999765 46677788875321 1 111111000 111112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc-eeEeccc
Q 041450 569 EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADI-GIAVADA 610 (949)
Q Consensus 569 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~g 610 (949)
+-=....+.+.-..+.|+||||..+|+.|-+.|++ .|+++.+
T Consensus 149 ~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~ 191 (221)
T d1o08a_ 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRP 191 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCH
T ss_pred HHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECCh
Confidence 21122333343345569999999999999999997 5666644
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=91.52 E-value=0.11 Score=50.21 Aligned_cols=122 Identities=9% Similarity=0.056 Sum_probs=75.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
.+.+++.+.+++|+ .+..++|+-....+..+-+++|+...... ....+.... ..+..|+
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~-----------------~~~~KP~ 143 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAP-HIYSAKDLG-----------------ADRVKPK 143 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTT-CEEEHHHHC-----------------TTCCTTS
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccce-eeccccccc-----------------ccccccC
Confidence 36788888887765 45678999999999999999998643211 111000000 0111222
Q ss_pred --hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEeccch--------HHHHhcccccccCCChhHHHHHH
Q 041450 570 --HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAVADAT--------DAARSASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 570 --qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~--------~~a~~aaDivl~~~~l~~i~~~i 634 (949)
.=....+.+.-....++||||..+|+.+=+.|++- |++..+. +....-||+++ +++..+..++
T Consensus 144 ~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll 217 (222)
T d2fdra1 144 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVI 217 (222)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHH
T ss_pred HHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 22333444443456799999999999999999973 5554321 22333589998 5666666555
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=91.28 E-value=0.12 Score=50.23 Aligned_cols=24 Identities=25% Similarity=0.264 Sum_probs=22.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcC
Q 041450 491 PRHDSAETIRRALDLGVNVKMITG 514 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTG 514 (949)
+-|++.+++++|+++|+++.++|.
T Consensus 49 l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 49 LRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp BCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred ecccHHHHHHHHHhhCCeEEEecc
Confidence 569999999999999999999995
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=91.15 E-value=0.23 Score=49.50 Aligned_cols=61 Identities=28% Similarity=0.312 Sum_probs=40.5
Q ss_pred HHHHHHHhhcCCEEEEEcCCc-cCHHhhhcCCc-eeEeccc---hHHHHh---cccccccCCChhHHHHHH
Q 041450 572 YEIVKKLQERKHICGMTGDGV-NDAPALKRADI-GIAVADA---TDAARS---ASDIVLTEPGLSVIVSAV 634 (949)
Q Consensus 572 ~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdV-GIamg~g---~~~a~~---aaDivl~~~~l~~i~~~i 634 (949)
....+.+.-....++||||.. ||+.+-+.|++ +|.+..| .+.... .+|+++ +++..+..+|
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHh
Confidence 334444443456799999996 69999999998 6766422 221222 248888 5788877765
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=90.89 E-value=0.054 Score=54.21 Aligned_cols=35 Identities=11% Similarity=0.176 Sum_probs=29.5
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh
Q 041450 493 HDSAETIRRALDLGVNVKMITGDQLAIGKETGRRL 527 (949)
Q Consensus 493 ~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~ 527 (949)
+++.++|++|+++|++++.+|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 78999999999999999999987766666666554
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.63 E-value=0.098 Score=50.45 Aligned_cols=108 Identities=10% Similarity=0.045 Sum_probs=68.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcC----CChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEe
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITG----DQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAG 565 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTG----D~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 565 (949)
.+++++.+.+++|++.|+++.++|+ .............|+..-. . ..+.. . + .....
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f-d-~i~~s-~-----------~-----~~~~K 157 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF-D-FLIES-C-----------Q-----VGMIK 157 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC-S-EEEEH-H-----------H-----HSCCT
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhh-c-eeeeh-h-----------h-----ccCCC
Confidence 3679999999999999999999996 2333444455555553210 0 00000 0 0 00112
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc-eeEeccchHHHHh
Q 041450 566 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADI-GIAVADATDAARS 616 (949)
Q Consensus 566 ~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~g~~~a~~ 616 (949)
-.|+--....+.++-....++||||..+|+.+-+.|++ +|.+..+.+...+
T Consensus 158 P~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~e 209 (222)
T d1cr6a1 158 PEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRE 209 (222)
T ss_dssp TCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHH
T ss_pred CChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHH
Confidence 23444455666666556679999999999999999998 6666655554443
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.90 E-value=0.047 Score=53.39 Aligned_cols=49 Identities=20% Similarity=0.316 Sum_probs=33.5
Q ss_pred hHHHHHHHHhh-cCCEEEEEcC----CccCHHhhhcCC-ceeEeccchHHHHhccc
Q 041450 570 HKYEIVKKLQE-RKHICGMTGD----GVNDAPALKRAD-IGIAVADATDAARSASD 619 (949)
Q Consensus 570 qK~~iV~~lq~-~g~~V~miGD----G~ND~~aLk~Ad-VGIamg~g~~~a~~aaD 619 (949)
+|..-++.|.+ ....|+++|| |.||.+||+.|+ .|+++++..+..+ .+|
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~~-~~~ 239 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRR-ICE 239 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHH-HHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHHHHH-HHH
Confidence 45555555543 3467999999 889999999997 6888887655443 443
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=89.82 E-value=0.092 Score=50.63 Aligned_cols=122 Identities=9% Similarity=0.068 Sum_probs=77.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeChh
Q 041450 490 PPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFPE 569 (949)
Q Consensus 490 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 569 (949)
.+.+++.++++.+++.|+++.++|+-........-+..|+.... ...+...... ...-.|+
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f--d~~~~s~~~~-----------------~~KP~p~ 153 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPVQ-----------------VYKPDNR 153 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGGT-----------------CCTTSHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc--cceeeeeeee-----------------ccccHHH
Confidence 35689999999999999999999999999988888888875321 0111110000 1111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCceeE-ec---cchHHHHhcccccccCCChhHHHH
Q 041450 570 HKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIA-VA---DATDAARSASDIVLTEPGLSVIVS 632 (949)
Q Consensus 570 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa-mg---~g~~~a~~aaDivl~~~~l~~i~~ 632 (949)
-=..+.+.+.-....|+||||..+|+-+=++|++--. +. ...+-....+|+++ +++..+++
T Consensus 154 ~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~ 218 (220)
T d1zrna_ 154 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVE 218 (220)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHT
T ss_pred HHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHh
Confidence 2233444554445569999999999999999998633 42 11111223578877 46666654
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=86.34 E-value=0.84 Score=44.09 Aligned_cols=98 Identities=10% Similarity=0.054 Sum_probs=62.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEeeCh
Q 041450 489 DPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGVFP 568 (949)
Q Consensus 489 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 568 (949)
.++-+++.+++++|+ |+++.++|..+...+...-+..|+.... ...+.+.... ++.-.|
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f--d~v~~s~~~~-----------------~~KP~p 150 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAKR-----------------VFKPHP 150 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTSH
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccc--cccccccccc-----------------ccCccH
Confidence 356789999999886 6888999999998888888888875321 1111111100 111112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCce-eEe
Q 041450 569 EHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIG-IAV 607 (949)
Q Consensus 569 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iam 607 (949)
+-=...++.+.-+...|+||||..+|+.+=++|++- |.+
T Consensus 151 ~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v 190 (245)
T d1qq5a_ 151 DSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARV 190 (245)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEE
Confidence 211233444443445699999999999999999873 444
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.17 E-value=0.26 Score=46.86 Aligned_cols=103 Identities=10% Similarity=-0.001 Sum_probs=59.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHH----HHHHHHhCCCCCCCCCccccCCccccccCCchHHHHhHhcceEEee
Q 041450 491 PRHDSAETIRRALDLGVNVKMITGDQLAIG----KETGRRLGMGTNMYPSSSLLGQSKDESIASMPVEELIEKADGFAGV 566 (949)
Q Consensus 491 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA----~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar~ 566 (949)
+.+++.+.++.|++.|+++.++|+...... .......++.... ..++..... ....-
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~f--d~i~~s~~~-----------------~~~KP 160 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHF--DFLIESCQV-----------------GMVKP 160 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTS--SEEEEHHHH-----------------TCCTT
T ss_pred CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhc--cEEEecccc-----------------ccchh
Confidence 678999999999999999999997543222 2222222221100 000000000 00111
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCccCHHhhhcCCc-eeEeccchH
Q 041450 567 FPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADI-GIAVADATD 612 (949)
Q Consensus 567 sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~g~~ 612 (949)
.|+-=..+.+.+.-....++||||...|+.+-++|++ +|.+.++.+
T Consensus 161 ~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~ 207 (225)
T d1zd3a1 161 EPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDT 207 (225)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHHH
T ss_pred HHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCcch
Confidence 1222233444444344568899999999999999999 677765544
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=82.74 E-value=0.33 Score=48.01 Aligned_cols=43 Identities=14% Similarity=0.055 Sum_probs=30.4
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCC---hHHHHHHHHHhCCC
Q 041450 488 FDPPRHDSAETIRRALDLGVNVKMITGDQ---LAIGKETGRRLGMG 530 (949)
Q Consensus 488 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~---~~tA~~ia~~~Gi~ 530 (949)
.+.+=+++.++|+.|+++|++++.+|+.. +....+.=+++|+.
T Consensus 17 ~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 17 DNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 33444789999999999999999999544 33333334456764
|