Citrus Sinensis ID: 041658

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
Protein Sequence
ATWSDSNSNDAASATATIRTRESHAPRSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFPRFVTDTNIEDVSVTDNNEKHPSPEPSSSSSSASSTSSESLKIKRRRLINEAA
Secondary Structure (PSIPRED)
cccccccccccccHHHHHcccccccccccccccccccccEEEEEcccccccccEEEEcccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccEEEEEEcccccEEEEEEccccccccEEEEcccccHHHHHHHHHHHHHHHHcccEEEcccccccccccccccccccccccccccccHcccccccccccccccccEEEEcccc
Coil and Loop (DISEMBL)
atwsdsnsndaaSATATIrtreshaprsfrgvrrrpwgkfgaeirdgkdnngervwlgtfytpedaaLAYDRAAFRLhgkkaklnfprfvtdtniedvsvtdnnekhpspepssssssasstssesLKIKRRRLINEAA
Flexible Loop (DISEMBL)
atwsdsnsndaasatatirtreshaprsfrgvrrrpwgkfgaeirdgkdnngerVWLGTFYTPEDAALAYDRAAFRLHGKkaklnfprfvtdtniedvsvtdnnekhpspepssssssasstsseslkikrRRLINEAA
Low Complexity Region (SEG)
ATWsdsnsndaasatatIRTRESHAPRSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFPRFVTDTNIEDVSVTDNNEKHpspepssssssasstssesLKIKRRRLINEAA
Disordered region (IsUnstruct)
************************************WGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFPRFVTDTNIE*******************************************
Disordered Region (DISOPRED)
*******************************VRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFPRF**************************************************
Disordered Region (DISEMBL)
*****************************RGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFPRFVTDTNIEDVSVT***************************IKRRRLINEAA
Disordered Region (DISPRO)
*************************PRSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFPRF**************************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
ATWSDSNSNDAASATATIRTRESHAPRSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFPRFVTDTNIEDVSVTDNNEKHPSPEPSSSSSSASSTSSESLKIKRRRLINEAA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	139	2.2.26 [Sep-21-2011]
Q8L9K1	226	Ethylene-responsive trans	yes	no	0.719	0.442	0.583	6e-26
Q40476	236	Ethylene-responsive trans	N/A	no	0.654	0.385	0.574	4e-22
Q40479	233	Ethylene-responsive trans	N/A	no	0.719	0.429	0.551	5e-22
O04681	161	Pathogenesis-related gene	N/A	no	0.546	0.472	0.569	8e-20
O80337	268	Ethylene-responsive trans	no	no	0.431	0.223	0.721	2e-19
Q9LW50	237	Ethylene-responsive trans	N/A	no	0.532	0.312	0.6	2e-19
P93007	218	Ethylene-responsive trans	no	no	0.582	0.371	0.554	2e-19
O80338	243	Ethylene-responsive trans	no	no	0.726	0.415	0.570	4e-19
Q8LDC8	218	Ethylene-responsive trans	no	no	0.575	0.366	0.564	9e-19
Q84XB3	244	Ethylene-responsive trans	N/A	no	0.532	0.303	0.6	1e-18

>sp|Q8L9K1|ERF99_ARATH Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2

 Score =  115 bits (289), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 63/108 (58%), Positives = 70/108 (64%), Gaps = 8/108 (7%)

Query: 23  SHAPRS----FRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLH 78
           SHAPR     +RGVRRRPWGKF AEIRD K  NG RVWLGT+ TPEDAA+AYDRAAF+L 
Sbjct: 82  SHAPRQKGMQYRGVRRRPWGKFAAEIRDPK-KNGARVWLGTYETPEDAAVAYDRAAFQLR 140

Query: 79  GKKAKLNFPRFVTDTNIEDVSVTDNNEKHPSPEPSSSSSSASSTSSES 126
           G KAKLNFP  +     E V +     +  SPEPS S    S    ES
Sbjct: 141 GSKAKLNFPHLIGSCKYEPVRI---RPRRRSPEPSVSDQLTSEQKRES 185

Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.
Arabidopsis thaliana (taxid: 3702)

>sp|Q40476|ERF1_TOBAC Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1

 Score =  103 bits (256), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 54/94 (57%), Positives = 67/94 (71%), Gaps = 3/94 (3%)

Query: 27  RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNF 86
           R +RGVRRRPWGKF AEIRD    NG RVWLGT+ T E+AA+AYD+AA+R+ G KA LNF
Sbjct: 103 RHYRGVRRRPWGKFAAEIRD-PAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNF 161

Query: 87  PRFVTDTNIEDVSVTDNNEKHPSPEPSSSSSSAS 120
           P  +     E V VT   ++  SPEP+SSS ++S
Sbjct: 162 PHRIGLNEPEPVRVT--AKRRASPEPASSSENSS 193

Probably acts as a transcriptional activator and may be involved in disease resistance pathways (By similarity). Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade and to be influenced by methyl-jasmonate.

Nicotiana tabacum (taxid: 4097)

>sp|Q40479|ERF2_TOBAC Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1

 Score =  103 bits (256), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 7/107 (6%)

Query: 27  RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNF 86
           R +RGVR+RPWGKF AEIRD    NG RVWLGT+ T E+AALAYD+AA+R+ G KA LNF
Sbjct: 97  RHYRGVRQRPWGKFAAEIRD-PAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNF 155

Query: 87  PRFVTDTNIEDVSVTDNNEKHPSPEPSSSSSSASSTSSESLKIKRRR 133
           P  +     E V +T    K  SPEP+SSS    S++ E+   KRRR
Sbjct: 156 PHRIGLNEPEPVRLT---AKRRSPEPASSS---ISSALENGSPKRRR 196

Acts as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate.

Nicotiana tabacum (taxid: 4097)

>sp|O04681|PTI5_SOLLC Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1

 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 45/79 (56%), Positives = 58/79 (73%), Gaps = 3/79 (3%)

Query: 27  RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNF 86
           + +RGVRRRPWGK+ AEIRD    +G RVWLGTF T E+AALAYDRAAFR+ G KA LNF
Sbjct: 57  KKYRGVRRRPWGKYAAEIRDSA-RHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNF 115

Query: 87  PRFVTD--TNIEDVSVTDN 103
           P  + +   +++ +S+  N
Sbjct: 116 PSEIVNASVSVDKLSLCSN 134

Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Activates plants defense genes. Can confer resistance to Pseudomonas syringae tomato by potentiating the transcription of a set of pathogenesis related genes, downstream to a defense signaling pathway involving PTO and PRF, but probably independent of ethylene, jasmonate and salicylic acid.

Solanum lycopersicum (taxid: 4081)

>sp|O80337|EF100_ARATH Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/61 (72%), Positives = 49/61 (80%), Gaps = 1/61 (1%)

Query: 27  RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNF 86
           + +RGVR+RPWGKF AEIRD    NG RVWLGTF T EDAALAYDRAAFR+ G +A LNF
Sbjct: 146 KHYRGVRQRPWGKFAAEIRD-PAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNF 204

Query: 87  P 87
           P
Sbjct: 205 P 205

Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LW50|ERF2_NICSY Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 54/75 (72%), Gaps = 1/75 (1%)

Query: 27  RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNF 86
           R +RGVR+RPWGKF AEIRD    NG RVWLGT+ T E+AALAYD+AA+R+ G KA LNF
Sbjct: 101 RHYRGVRQRPWGKFAAEIRD-PAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNF 159

Query: 87  PRFVTDTNIEDVSVT 101
           P  +     E V +T
Sbjct: 160 PHRIGLNEPEPVRLT 174

Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional activator.

Nicotiana sylvestris (taxid: 4096)

>sp|P93007|EF112_ARATH Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 2/83 (2%)

Query: 8   SNDAASATATIRTRESHAPRSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAA 67
           S D  S++ T++ + +   R++RGVR+RPWGK+ AEIRD   N   RVWLGTF T E+AA
Sbjct: 49  SIDDQSSSLTLQEKSNSRQRNYRGVRQRPWGKWAAEIRD--PNKAARVWLGTFDTAEEAA 106

Query: 68  LAYDRAAFRLHGKKAKLNFPRFV 90
           LAYD+AAF   G KAKLNFP  +
Sbjct: 107 LAYDKAAFEFRGHKAKLNFPEHI 129

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|O80338|EF101_ARATH Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/107 (57%), Positives = 73/107 (68%), Gaps = 6/107 (5%)

Query: 27  RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNF 86
           + +RGVR+RPWGKF AEIRD    NG RVWLGTF T EDAALAYD AAFR+ G +A LNF
Sbjct: 115 KHYRGVRQRPWGKFAAEIRD-PAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNF 173

Query: 87  PRFVTDTNIEDVSVTDNNEKHPSPEPSSSSSSASSTSSESLKIKRRR 133
           P  V     + V +T           SSSSSS+S++SSE+ K+KRRR
Sbjct: 174 PLRVNSGEPDPVRITSKRSSS-----SSSSSSSSTSSSENGKLKRRR 215

Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Involved in disease resistance pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LDC8|ERF92_ARATH Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=1 SV=2

 Score = 92.0 bits (227), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 48/85 (56%), Positives = 58/85 (68%), Gaps = 5/85 (5%)

Query: 2   TWSDSNSNDAASATATIRTRESHAPRSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFY 61
           T+ DS+S D    + + R  E    +S+RGVRRRPWGKF AEIRD    NG RVWLGTF 
Sbjct: 59  TYIDSDSQDLPIKSVSSRKSE----KSYRGVRRRPWGKFAAEIRDST-RNGIRVWLGTFE 113

Query: 62  TPEDAALAYDRAAFRLHGKKAKLNF 86
           + E+AALAYD+AAF + G  A LNF
Sbjct: 114 SAEEAALAYDQAAFSMRGSSAILNF 138

Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression during the plant development, and/or mediated by stress factors and by components of stress signal transduction pathways. Seems to be a key integrator of ethylene and jasmonate signals in the regulation of ethylene/jasmonate-dependent defenses. Can mediate resistance to necrotizing fungi (Botrytis cinerea and Plectosphaerella cucumerina) and to soil borne fungi (Fusarium oxysporum conglutinans and Fusiarium oxysporum lycopersici), but probably not to necrotizing bacteria (Pseudomonas syringae tomato).

Arabidopsis thaliana (taxid: 3702)

>sp|Q84XB3|ERF1_SOLLC Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 53/75 (70%), Gaps = 1/75 (1%)

Query: 27  RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNF 86
           R +RGVR+RPWGKF AEIRD    NG RVWLGT+ + E+AALAY +AAFR+ G KA LNF
Sbjct: 105 RHYRGVRQRPWGKFAAEIRD-PAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKALLNF 163

Query: 87  PRFVTDTNIEDVSVT 101
           P  +     E V VT
Sbjct: 164 PHRIGLNEPEPVRVT 178

Involved in the regulation of gene expression during fruit ripening, by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Probably acts as a transcriptional activator and may be involved in disease resistance pathways.

Solanum lycopersicum (taxid: 4081)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
21594007	226	putative ethylene response element bindi	0.719	0.442	0.583	3e-24
15225361	226	ethylene-responsive transcription factor	0.719	0.442	0.583	4e-24
297824519	240	hypothetical protein ARALYDRAFT_903921 [	0.719	0.416	0.583	5e-24
297810185	162	hypothetical protein ARALYDRAFT_912253 [	0.712	0.611	0.491	2e-22
224137170	227	AP2/ERF domain-containing transcription	0.755	0.462	0.566	4e-22
356503258	197	PREDICTED: ethylene-responsive transcrip	0.913	0.644	0.482	1e-21
356531816	203	PREDICTED: ethylene-responsive transcrip	0.618	0.423	0.608	1e-21
255541050	225	Ethylene-responsive transcription factor	0.597	0.368	0.583	1e-21
292668939	278	AP2 domain class transcription factor [M	0.604	0.302	0.602	2e-21
356503262	187	PREDICTED: ethylene-responsive transcrip	0.690	0.513	0.539	2e-21

>gi|21594007|gb|AAM65925.1| putative ethylene response element binding protein (EREBP) [Arabidopsis thaliana]

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/108 (58%), Positives = 70/108 (64%), Gaps = 8/108 (7%)

Query: 23  SHAPRS----FRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLH 78
           SHAPR     +RGVRRRPWGKF AEIRD K  NG RVWLGT+ TPEDAA+AYDRAAF+L 
Sbjct: 82  SHAPRQKGMQYRGVRRRPWGKFAAEIRDPK-KNGARVWLGTYETPEDAAVAYDRAAFQLR 140

Query: 79  GKKAKLNFPRFVTDTNIEDVSVTDNNEKHPSPEPSSSSSSASSTSSES 126
           G KAKLNFP  +     E V +     +  SPEPS S    S    ES
Sbjct: 141 GSKAKLNFPHLIGSCKYEPVRI---RPRRRSPEPSVSDQLTSEQKRES 185

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15225361|ref|NP_182011.1| ethylene-responsive transcription factor 13 [Arabidopsis thaliana] gi|57012834|sp|Q8L9K1.2|ERF99_ARATH RecName: Full=Ethylene-responsive transcription factor 13; Short=AtERF13; AltName: Full=Ethylene-responsive element-binding factor 13; Short=EREBP-13 gi|13272437|gb|AAK17157.1|AF325089_1 putative ethylene response element binding protein (EREBP) [Arabidopsis thaliana] gi|13899091|gb|AAK48967.1|AF370540_1 putative ethylene response element binding protein; EREBP [Arabidopsis thaliana] gi|2344900|gb|AAC31840.1| putative ethylene response element binding protein (EREBP) [Arabidopsis thaliana] gi|18377440|gb|AAL66886.1| putative ethylene response element binding protein (EREBP) [Arabidopsis thaliana] gi|330255379|gb|AEC10473.1| ethylene-responsive transcription factor 13 [Arabidopsis thaliana]

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/108 (58%), Positives = 70/108 (64%), Gaps = 8/108 (7%)

Query: 23  SHAPRS----FRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLH 78
           SHAPR     +RGVRRRPWGKF AEIRD K  NG RVWLGT+ TPEDAA+AYDRAAF+L 
Sbjct: 82  SHAPRQKGMQYRGVRRRPWGKFAAEIRDPK-KNGARVWLGTYETPEDAAVAYDRAAFQLR 140

Query: 79  GKKAKLNFPRFVTDTNIEDVSVTDNNEKHPSPEPSSSSSSASSTSSES 126
           G KAKLNFP  +     E V +     +  SPEPS S    S    ES
Sbjct: 141 GSKAKLNFPHLIGSCKYEPVRI---RPRRRSPEPSVSDQLTSEQKRES 185

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824519|ref|XP_002880142.1| hypothetical protein ARALYDRAFT_903921 [Arabidopsis lyrata subsp. lyrata] gi|297325981|gb|EFH56401.1| hypothetical protein ARALYDRAFT_903921 [Arabidopsis lyrata subsp. lyrata]

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/108 (58%), Positives = 70/108 (64%), Gaps = 8/108 (7%)

Query: 23  SHAPRS----FRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLH 78
           SHAPR     +RGVRRRPWGKF AEIRD K  NG RVWLGT+ TPEDAA+AYDRAAF+L 
Sbjct: 96  SHAPRQKGMQYRGVRRRPWGKFAAEIRDPK-KNGARVWLGTYETPEDAAVAYDRAAFQLR 154

Query: 79  GKKAKLNFPRFVTDTNIEDVSVTDNNEKHPSPEPSSSSSSASSTSSES 126
           G KAKLNFP  +     E V +     +  SPEPS S    S    ES
Sbjct: 155 GSKAKLNFPHLIGSCKYEPVRI---RPRRRSPEPSVSDQLTSEQKRES 199

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810185|ref|XP_002872976.1| hypothetical protein ARALYDRAFT_912253 [Arabidopsis lyrata subsp. lyrata] gi|297318813|gb|EFH49235.1| hypothetical protein ARALYDRAFT_912253 [Arabidopsis lyrata subsp. lyrata]

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/112 (49%), Positives = 75/112 (66%), Gaps = 13/112 (11%)

Query: 28  SFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFP 87
           +++GVRRRPWGK+ AEIRD  + NG R+WLGT+ TPE+AA+AYD+AAF++ G KAKLNFP
Sbjct: 44  NYKGVRRRPWGKYAAEIRD-PNKNGARIWLGTYETPEEAAVAYDQAAFKMRGSKAKLNFP 102

Query: 88  RFVTDTNIEDVSVTDNNEKHPSPEPSSSSSSASSTSSESLKIKRRRLINEAA 139
             +     E V VT+ N++  S EP+S ++            KRR +IN  A
Sbjct: 103 HLIGIDQAEPVRVTNGNKRQRSMEPNSQAA------------KRRSIINLTA 142

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137170|ref|XP_002327053.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa] gi|222835368|gb|EEE73803.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 60/106 (56%), Positives = 71/106 (66%), Gaps = 1/106 (0%)

Query: 27  RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNF 86
           R+++GVRRRPWGK+ AEIRD K  NG R WLGT+ TPEDAA+AYDRAAF++ G KAKLNF
Sbjct: 117 RNYKGVRRRPWGKYAAEIRDPK-KNGARQWLGTYETPEDAAMAYDRAAFKMRGAKAKLNF 175

Query: 87  PRFVTDTNIEDVSVTDNNEKHPSPEPSSSSSSASSTSSESLKIKRR 132
           P  +  +N E V VT+          SS  SS S    ES K KRR
Sbjct: 176 PHLIGSSNYEPVRVTNKRYSPEPSSLSSPVSSLSEVDDESPKSKRR 221

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503258|ref|XP_003520428.1| PREDICTED: ethylene-responsive transcription factor 2-like [Glycine max]

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/139 (48%), Positives = 82/139 (58%), Gaps = 12/139 (8%)

Query: 11  AASATATIRTRESHAPRS---FRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAA 67
           A    A +  RE +APR    FRGVRRRPWGKF AEI D K  NG RVWLGT+ T E+A 
Sbjct: 46  ACDTEAPLAAREVYAPRKWKRFRGVRRRPWGKFAAEIWDPKKKNG-RVWLGTYETEEEAG 104

Query: 68  LAYDRAAFRLHGKKAKLNFPRFV-TDTNIEDVSVTDNNEKHPSPEPS--SSSSSASSTSS 124
           LAYDRA F++ G KAKLNFP  + +    E VSV    + + SPEP    S    +  SS
Sbjct: 105 LAYDRACFKMRGSKAKLNFPHLIGSHAPPERVSVVAARKPN-SPEPCFLPSPPPVTEDSS 163

Query: 125 ESLKIKRRR----LINEAA 139
           +   +K+RR    L+N  A
Sbjct: 164 QPQGLKKRRNLADLLNRLA 182

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531816|ref|XP_003534472.1| PREDICTED: ethylene-responsive transcription factor 2-like [Glycine max]

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/92 (60%), Positives = 68/92 (73%), Gaps = 6/92 (6%)

Query: 14  ATATIRTRESHAP---RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAY 70
           ATA +  R+ HAP   + +RGVRRRPWGKF AEIRD K  NG RVWLGT+ T E AALAY
Sbjct: 61  ATAVV-ARDVHAPPTWKHYRGVRRRPWGKFAAEIRDPK-KNGARVWLGTYDTEEKAALAY 118

Query: 71  DRAAFRLHGKKAKLNFPRFV-TDTNIEDVSVT 101
           D+AAF++ G+KAKLNFP  + +D   E+V VT
Sbjct: 119 DKAAFKMRGRKAKLNFPHLIDSDMLSEEVMVT 150

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541050|ref|XP_002511589.1| Ethylene-responsive transcription factor, putative [Ricinus communis] gi|223548769|gb|EEF50258.1| Ethylene-responsive transcription factor, putative [Ricinus communis]

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 49/84 (58%), Positives = 59/84 (70%), Gaps = 1/84 (1%)

Query: 28  SFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFP 87
            +RGVRRRPWGK+ AEIRD K  NG R+WLGT+  PEDAALAYDRAAF++ G +AKLNFP
Sbjct: 118 QYRGVRRRPWGKYAAEIRDPK-KNGARIWLGTYEKPEDAALAYDRAAFKMRGARAKLNFP 176

Query: 88  RFVTDTNIEDVSVTDNNEKHPSPE 111
             +     E +   +N  K  SPE
Sbjct: 177 HLIGSDEYEPIRAGNNKRKRCSPE 200

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|292668939|gb|ADE41124.1| AP2 domain class transcription factor [Malus x domestica]

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/88 (60%), Positives = 61/88 (69%), Gaps = 4/88 (4%)

Query: 17  TIRTRESHAPRS---FRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRA 73
            +  RE+H P S   FRGVRRRPWGK+ AEIRD K  NG RVWLGT+ T E AALAYD+A
Sbjct: 115 IVVVRETHTPPSRQHFRGVRRRPWGKYAAEIRDPK-KNGARVWLGTYETAEGAALAYDQA 173

Query: 74  AFRLHGKKAKLNFPRFVTDTNIEDVSVT 101
           AF++ G KAKLNFP  +     E V VT
Sbjct: 174 AFKIRGSKAKLNFPHLIGSEGYEPVRVT 201

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503262|ref|XP_003520430.1| PREDICTED: ethylene-responsive transcription factor CRF1-like [Glycine max]

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/102 (53%), Positives = 67/102 (65%), Gaps = 6/102 (5%)

Query: 22  ESHAP---RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLH 78
           E HAP   + +RGVRRRPWGKF AEIRD  + N  RVWLGT+ T E+A LAYDRAAF++H
Sbjct: 54  EVHAPPKWKHYRGVRRRPWGKFAAEIRD-PNKNSARVWLGTYVTEEEAGLAYDRAAFKIH 112

Query: 79  GKKAKLNFPRFV-TDTNI-EDVSVTDNNEKHPSPEPSSSSSS 118
           G KAKLNFP  + +D ++ E + V   N   P   P  S  S
Sbjct: 113 GSKAKLNFPHLIGSDVSLSEPMRVVATNSHEPCLLPLESQGS 154

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
TAIR|locus:2055002	226	ERF13 "ethylene-responsive ele	0.553	0.340	0.658	1.4e-23
TAIR|locus:2171514	243	ERF2 "ethylene responsive elem	0.726	0.415	0.476	1.2e-19
TAIR|locus:2129116	268	ERF-1 "ethylene responsive ele	0.525	0.272	0.621	2.5e-19
TAIR|locus:2018289	133	ERF14 "Ethylene-responsive ele	0.417	0.436	0.711	2.8e-18
TAIR|locus:2038500	244	ORA59 "octadecanoid-responsive	0.539	0.307	0.582	7.5e-18
TAIR|locus:2086213	139	TDR1 "Transcriptional Regulato	0.417	0.417	0.728	9.5e-18
TAIR|locus:2086223	218	ERF1 "ethylene response factor	0.582	0.371	0.523	9.5e-18
UNIPROTKB|Q5MFV1	303	BIERF3 "BTH-induced ERF transc	0.431	0.198	0.655	1.2e-17
TAIR|locus:2151576	201	AT5G61590 [Arabidopsis thalian	0.489	0.338	0.608	1.2e-17
TAIR|locus:2194007	262	ERF73 "ethylene response facto	0.410	0.217	0.627	1.4e-17

TAIR|locus:2055002 ERF13 "ethylene-responsive element binding factor 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 54/82 (65%), Positives = 60/82 (73%)

Query:    23 SHAPRS----FRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLH 78
             SHAPR     +RGVRRRPWGKF AEIRD K  NG RVWLGT+ TPEDAA+AYDRAAF+L 
Sbjct:    82 SHAPRQKGMQYRGVRRRPWGKFAAEIRDPK-KNGARVWLGTYETPEDAAVAYDRAAFQLR 140

Query:    79 GKKAKLNFPRFVTDTNIEDVSV 100
             G KAKLNFP  +     E V +
Sbjct:   141 GSKAKLNFPHLIGSCKYEPVRI 162

GO:0003677 "DNA binding" evidence=IEA;ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA;TAS

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2171514 ERF2 "ethylene responsive element binding factor 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 51/107 (47%), Positives = 59/107 (55%)

Query:    27 RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNF 86
             + +RGVR+RPWGKF AEIRD    NG RVWLGTF T EDAALAYD AAFR+ G +A LNF
Sbjct:   115 KHYRGVRQRPWGKFAAEIRDPA-KNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNF 173

Query:    87 PRFVTDTNIEDVSVTDNNEKHXXXXXXXXXXXXXXXXXXXLKIKRRR 133
             P  V     + V +T                          K+KRRR
Sbjct:   174 PLRVNSGEPDPVRITSKRSSSSSSSSSSSTSSSENG-----KLKRRR 215

GO:0003677 "DNA binding" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IDA;TAS

GO:0005634 "nucleus" evidence=ISM;TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;IDA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA;TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP;IDA

GO:0009864 "induced systemic resistance, jasmonic acid mediated signaling pathway" evidence=IMP

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2129116 ERF-1 "ethylene responsive element binding factor 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 46/74 (62%), Positives = 53/74 (71%)

Query:    27 RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNF 86
             + +RGVR+RPWGKF AEIRD    NG RVWLGTF T EDAALAYDRAAFR+ G +A LNF
Sbjct:   146 KHYRGVRQRPWGKFAAEIRDPA-KNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNF 204

Query:    87 PRFVTDTNIEDVSV 100
             P  V     + V +
Sbjct:   205 PLRVNSGEPDPVRI 218

GO:0003677 "DNA binding" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;IDA

GO:0005643 "nuclear pore" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2018289 ERF14 "Ethylene-responsive element binding factor 14" [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 42/59 (71%), Positives = 48/59 (81%)

Query:    29 FRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFP 87
             +RGVRRRPWGK+ AEIRD +  +GERVWLGTF T EDAA AYDRAA+ + GK A LNFP
Sbjct:    20 YRGVRRRPWGKYAAEIRDSR-KHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFP 77

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0009873 "ethylene mediated signaling pathway" evidence=TAS

TAIR|locus:2038500 ORA59 "octadecanoid-responsive Arabidopsis AP2/ERF 59" [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 46/79 (58%), Positives = 56/79 (70%)

Query:    27 RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNF 86
             +S+RGVR+RPWGKF AEIRD     G RVWLGTF T E AALAYD+AAF L G  A LNF
Sbjct:    80 KSYRGVRKRPWGKFAAEIRDST-RKGIRVWLGTFDTAEAAALAYDQAAFALKGSLAVLNF 138

Query:    87 PRFVTDTNI---EDVSVTD 102
             P  V + ++   E+V++ D
Sbjct:   139 PADVVEESLRKMENVNLND 157

GO:0003677 "DNA binding" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0009723 "response to ethylene stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0009861 "jasmonic acid and ethylene-dependent systemic resistance" evidence=IMP

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA;TAS

TAIR|locus:2086213 TDR1 "Transcriptional Regulator of Defense Response 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 43/59 (72%), Positives = 45/59 (76%)

Query:    29 FRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFP 87
             FRGVRRRPWGKF AEIRD    NG R+WLGTF T E+AA AYDRAAF L G  A LNFP
Sbjct:    20 FRGVRRRPWGKFAAEIRD-PSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFP 77

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA;TAS

TAIR|locus:2086223 ERF1 "ethylene response factor 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 44/84 (52%), Positives = 57/84 (67%)

Query:    18 IRTRESHAPRSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRL 77
             + +R+S   +S+RGVRRRPWGKF AEIRD    NG RVWLGTF + E+AALAYD+AAF +
Sbjct:    73 VSSRKSE--KSYRGVRRRPWGKFAAEIRDST-RNGIRVWLGTFESAEEAALAYDQAAFSM 129

Query:    78 HGKKAKLNFPRFVTDTNIEDVSVT 101
              G  A LNF       ++ ++  T
Sbjct:   130 RGSSAILNFSAERVQESLSEIKYT 153

GO:0003677 "DNA binding" evidence=IEA;IDA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0006952 "defense response" evidence=IMP

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=TAS

GO:0009873 "ethylene mediated signaling pathway" evidence=IGI;TAS

UNIPROTKB|Q5MFV1 BIERF3 "BTH-induced ERF transcriptional factor 3" [Oryza sativa Indica Group (taxid:39946)]

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 40/61 (65%), Positives = 49/61 (80%)

Query:    27 RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNF 86
             + +RGVR+RPWGKF AEIRD    NG RVWLGTF + E+AA+AYDRAA+R+ G +A LNF
Sbjct:   147 KHYRGVRQRPWGKFAAEIRDPA-KNGARVWLGTFDSAEEAAVAYDRAAYRMRGSRALLNF 205

Query:    87 P 87
             P
Sbjct:   206 P 206

GO:0009620 "response to fungus" evidence=IC

TAIR|locus:2151576 AT5G61590 [Arabidopsis thaliana (taxid:3702)]

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 42/69 (60%), Positives = 49/69 (71%)

Query:    19 RTRESHAPRSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLH 78
             +T+     R +RGVRRRPWGKF AEIRD     G R+WLGTF +  DAA AYD AAF+L 
Sbjct:    97 KTKRFEETRHYRGVRRRPWGKFAAEIRDPA-KKGSRIWLGTFESDIDAARAYDYAAFKLR 155

Query:    79 GKKAKLNFP 87
             G+KA LNFP
Sbjct:   156 GRKAVLNFP 164

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0009414 "response to water deprivation" evidence=IEP

TAIR|locus:2194007 ERF73 "ethylene response factor 73" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
 Identities = 37/59 (62%), Positives = 44/59 (74%)

Query:    29 FRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFP 87
             ++G+RRRPWG++ AEIRD     G RVWLGTF T E+AA AYD  A R+ G KAKLNFP
Sbjct:    76 YKGIRRRPWGRWAAEIRD--PIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFP 132

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS;IDA

GO:0034059 "response to anoxia" evidence=IGI

GO:0009873 "ethylene mediated signaling pathway" evidence=IMP;TAS

GO:0071369 "cellular response to ethylene stimulus" evidence=IMP

GO:0071456 "cellular response to hypoxia" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	139
smart00380	64	smart00380, AP2, DNA-binding domain in plant prote	3e-26
cd00018	61	cd00018, AP2, DNA-binding domain found in transcri	5e-25
pfam00847	53	pfam00847, AP2, AP2 domain	1e-10

>gnl|CDD|197689 smart00380, AP2, DNA-binding domain in plant proteins such as APETALA2 and EREBPs

 Score = 93.5 bits (233), Expect = 3e-26
 Identities = 39/60 (65%), Positives = 47/60 (78%), Gaps = 2/60 (3%)

Query: 28 SFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFP 87
           +RGVR+RPWGK+ AEIRD     G+RVWLGTF T E+AA AYDRAAF+  G+ A+LNFP
Sbjct: 1  KYRGVRQRPWGKWVAEIRDPS--KGKRVWLGTFDTAEEAARAYDRAAFKFRGRSARLNFP 58

Length = 64

>gnl|CDD|237985 cd00018, AP2, DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein)

 Score = 90.0 bits (224), Expect = 5e-25
 Identities = 38/59 (64%), Positives = 44/59 (74%), Gaps = 2/59 (3%)

Query: 29 FRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFP 87
          +RGVR+RPWGK+ AEIRD     G R+WLGTF T E+AA AYDRAA +L G  A LNFP
Sbjct: 3  YRGVRQRPWGKWVAEIRDPS--GGRRIWLGTFDTAEEAARAYDRAALKLRGSSAVLNFP 59

In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1, which is involved in stress response, contain a single copy of the AP2 domain. APETALA2-like proteins, which play a role in plant development contain two copies. Length = 61

>gnl|CDD|216148 pfam00847, AP2, AP2 domain

 Score = 53.0 bits (128), Expect = 1e-10
 Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 29 FRGVRRRP-WGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHG 79
          ++GVR    WG++ AEIRD  +   +R  LGTF T E+AA A   A  +L G
Sbjct: 3  YKGVRYDKRWGRWVAEIRDPGEKKKKRFSLGTFGT-EEAARAAIAARLKLRG 53

This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins. Length = 53

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	139
smart00380	64	AP2 DNA-binding domain in plant proteins such as A	99.88
cd00018	61	AP2 DNA-binding domain found in transcription regu	99.88
PHA00280	121	putative NHN endonuclease	99.73
PF00847	56	AP2: AP2 domain; InterPro: IPR001471 Pathogenesis-	99.31

>smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs

Probab=99.88  E-value=1.8e-22  Score=132.68  Aligned_cols=64  Identities=63%  Similarity=1.131  Sum_probs=59.8

Q ss_pred             ceeeeEECCCCeeEEEEecCCCCCCcEEEeCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCC
Q 041658           28 SFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFPRFVTDT   93 (139)
Q Consensus        28 ~yrGV~~~~~gkw~A~I~~~~~~~gk~~~LG~f~t~eeAA~AYD~aa~~~~G~~a~lNFp~~~~~~   93 (139)
                      +|+||+++++|+|+|+|+++..  |+.+|||+|+|+||||.|||.+++++||.++.+|||...|+.
T Consensus         1 ~~kGV~~~~~gkw~A~I~~~~~--~k~~~lG~f~t~eeAa~Ayd~a~~~~~g~~a~~Nf~~~~y~~   64 (64)
T smart00380        1 KYRGVRQRPWGKWVAEIRDPSK--GKRVWLGTFDTAEEAARAYDRAAFKFRGRSARLNFPNSLYDS   64 (64)
T ss_pred             CEeeEEeCCCCeEEEEEEecCC--CcEEecCCCCCHHHHHHHHHHHHHHhcCCccccCCCCccCCC
Confidence            5999998888999999999765  889999999999999999999999999999999999998863

>cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein)

Probab=99.88  E-value=1.3e-22  Score=131.84  Aligned_cols=61  Identities=62%  Similarity=1.086  Sum_probs=56.7

Q ss_pred             CceeeeEECCCCeeEEEEecCCCCCCcEEEeCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 041658           27 RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFPRF   89 (139)
Q Consensus        27 s~yrGV~~~~~gkw~A~I~~~~~~~gk~~~LG~f~t~eeAA~AYD~aa~~~~G~~a~lNFp~~   89 (139)
                      |+|+||+++++|+|+|+|+++..  |+++|||+|+|+||||.|||.++++++|.++.+|||++
T Consensus         1 s~~~GV~~~~~gkw~A~I~~~~~--gk~~~lG~f~t~eeAa~Ayd~a~~~~~g~~a~~Nf~~~   61 (61)
T cd00018           1 SKYRGVRQRPWGKWVAEIRDPSG--GRRIWLGTFDTAEEAARAYDRAALKLRGSSAVLNFPDS   61 (61)
T ss_pred             CCccCEEECCCCcEEEEEEeCCC--CceEccCCCCCHHHHHHHHHHHHHHhcCCccccCCCCC
Confidence            68999998888999999999543  78999999999999999999999999999999999974

In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1, which is involved in stress response, contain a single copy of the AP2 domain. APETALA2-like proteins, which play a role in plant development contain two copies.

>PHA00280 putative NHN endonuclease

Probab=99.73  E-value=7.9e-18  Score=124.02  Aligned_cols=76  Identities=12%  Similarity=0.148  Sum_probs=66.5

Q ss_pred             CcCCCCCCchhhHhhhhccCCCCCCCceeeeEEC-CCCeeEEEEecCCCCCCcEEEeCCCCCHHHHHHHHHHHHHHhcCC
Q 041658            2 TWSDSNSNDAASATATIRTRESHAPRSFRGVRRR-PWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGK   80 (139)
Q Consensus         2 ~~~n~~~~~~~~~~~~~r~~~~~~~s~yrGV~~~-~~gkw~A~I~~~~~~~gk~~~LG~f~t~eeAA~AYD~aa~~~~G~   80 (139)
                      .++||+.++.++++.+.+ ...+++|||+||.+. ..|||+|+|.+    +|++++||.|+++|+|+.||+ ++.+|||+
T Consensus        43 ri~NLr~~T~~eN~~N~~-~~~~N~SG~kGV~~~k~~~kw~A~I~~----~gK~~~lG~f~~~e~A~~a~~-~~~~lhGe  116 (121)
T PHA00280         43 ALDNLRLALPKENSWNMK-TPKSNTSGLKGLSWSKEREMWRGTVTA----EGKQHNFRSRDLLEVVAWIYR-TRRELHGQ  116 (121)
T ss_pred             cHHHhhhcCHHHHhcccC-CCCCCCCCCCeeEEecCCCeEEEEEEE----CCEEEEcCCCCCHHHHHHHHH-HHHHHhhc
Confidence            478999999988888764 566788999999765 56999999998    788999999999999999997 78899999


Q ss_pred             CCC
Q 041658           81 KAK   83 (139)
Q Consensus        81 ~a~   83 (139)
                      +|.
T Consensus       117 Fa~  119 (121)
T PHA00280        117 FAR  119 (121)
T ss_pred             ccc
Confidence            875

>PF00847 AP2: AP2 domain; InterPro: IPR001471 Pathogenesis-related genes transcriptional activator binds to the GCC-box pathogenesis-related promoter element and activates the plant's defence genes

Probab=99.31  E-value=6.6e-12  Score=79.55  Aligned_cols=53  Identities=32%  Similarity=0.443  Sum_probs=45.3

Q ss_pred             CceeeeEECC-CCeeEEEEecCCCCCC--cEEEeCCCCCHHHHHHHHHHHHHHhcCC
Q 041658           27 RSFRGVRRRP-WGKFGAEIRDGKDNNG--ERVWLGTFYTPEDAALAYDRAAFRLHGK   80 (139)
Q Consensus        27 s~yrGV~~~~-~gkw~A~I~~~~~~~g--k~~~LG~f~t~eeAA~AYD~aa~~~~G~   80 (139)
                      |+|+||++++ .++|+|+|++... +|  +.++||.|++++||+.||+.+++.++|+
T Consensus         1 s~~~GV~~~~~~~~W~a~i~~~~~-~g~~k~f~~g~fg~~~eA~~~a~~~r~~~~~e   56 (56)
T PF00847_consen    1 SGYKGVSWDKRRGRWRAQIRVWSE-NGKRKRFSVGKFGFEEEAKRAAIEARKELEGE   56 (56)
T ss_dssp             SSSTTEEEETTTTEEEEEEEECCC-TTEEEEEEECCCCCHHHHHHHHHHHHHHCTS-
T ss_pred             CCcEEEEEcCCCCEEEEEEEEccc-CcccEEEeCccCCCHHHHHHHHHHHHHHhcCC
Confidence            6899997664 6999999998433 33  8999999999999999999999999874

Ethylene, chemically the simplest plant hormone, participates in a number of stress responses and developmental processes: e.g., fruit ripening, inhibition of stem and root elongation, promotion of seed germination and flowering, senescence of leaves and flowers, and sex determination []. DNA sequence elements that confer ethylene responsiveness have been shown to contain two 11bp GCC boxes, which are necessary and sufficient for transcriptional control by ethylene. Ethylene responsive element binding proteins (EREBPs) have now been identified in a variety of plants. The proteins share a similar domain of around 59 amino acids, which interacts directly with the GCC box in the ERE.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 3IGM_A 3GCC_A 1GCC_A 2GCC_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	139
2gcc_A	70	Solution Structure Of The Gcc-Box Binding Domain, N		5e-19
1gcc_A	63	Solution Nmr Structure Of The Complex Of Gcc-Box Bi		6e-19

>pdb|2GCC|A Chain A, Solution Structure Of The Gcc-Box Binding Domain, Nmr, Minimized Mean Structure Length = 70

Iteration: 1
 Score = 89.4 bits (220), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 44/61 (72%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 27 RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNF 86
          + +RGVR+RPWGKF AEIRD    NG RVWLGTF T EDAALAYDRAAFR+ G +A LNF
Sbjct: 4  KHYRGVRQRPWGKFAAEIRD-PAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNF 62
Query: 87 P 87
          P
Sbjct: 63 P 63

>pdb|1GCC|A Chain A, Solution Nmr Structure Of The Complex Of Gcc-Box Binding Domain Of Aterf1 And Gcc-Box Dna, Minimized Average Structure Length = 63

Iteration: 1
 Score = 89.4 bits (220), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 44/61 (72%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 27 RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNF 86
          + +RGVR+RPWGKF AEIRD    NG RVWLGTF T EDAALAYDRAAFR+ G +A LNF
Sbjct: 1  KHYRGVRQRPWGKFAAEIRD-PAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNF 59
Query: 87 P 87
          P
Sbjct: 60 P 60

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	139
1gcc_A	63	Ethylene responsive element binding factor 1; tran	1e-31

>1gcc_A Ethylene responsive element binding factor 1; transcription factor, protein-DNA complex, ethylene inducible; HET: DNA; NMR {Arabidopsis thaliana} SCOP: d.10.1.2 PDB: 2gcc_A 3gcc_A Length = 63

 Score =  106 bits (266), Expect = 1e-31
 Identities = 44/61 (72%), Positives = 49/61 (80%), Gaps = 1/61 (1%)

Query: 27 RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNF 86
          + +RGVR+RPWGKF AEIRD    NG RVWLGTF T EDAALAYDRAAFR+ G +A LNF
Sbjct: 1  KHYRGVRQRPWGKFAAEIRDPA-KNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNF 59

Query: 87 P 87
          P
Sbjct: 60 P 60

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	139
1gcc_A	63	Ethylene responsive element binding factor 1; tran	99.94
1u3e_M	174	HNH homing endonuclease; HNH catalytic motif, heli	95.68
3igm_B	77	PF14_0633 protein; AP2 domain, specific transcript	92.36

>1gcc_A Ethylene responsive element binding factor 1; transcription factor, protein-DNA complex, ethylene inducible; HET: DNA; NMR {Arabidopsis thaliana} SCOP: d.10.1.2 PDB: 2gcc_A 3gcc_A

Probab=99.94  E-value=3.7e-27  Score=154.65  Aligned_cols=61  Identities=72%  Similarity=1.221  Sum_probs=58.1

Q ss_pred             ceeeeEECCCCeeEEEEecCCCCCCcEEEeCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 041658           28 SFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFPRF   89 (139)
Q Consensus        28 ~yrGV~~~~~gkw~A~I~~~~~~~gk~~~LG~f~t~eeAA~AYD~aa~~~~G~~a~lNFp~~   89 (139)
                      +|+||+++++|||+|+|+++.+ +|+++|||+|+|+||||+|||.|+++++|..+.||||++
T Consensus         2 ~yrGV~~r~~gkw~A~I~~~~~-~g~r~~LGtf~T~eeAA~AyD~Aa~~~~G~~a~~NFp~~   62 (63)
T 1gcc_A            2 HYRGVRQRPWGKFAAEIRDPAK-NGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR   62 (63)
T ss_dssp             CCTTEEEETTTEEEEEEEETTT-TSEEEEEEEESSHHHHHHHHHHHHHHHHSSCCCCSSCTT
T ss_pred             CcccEeeCCCCcEEEEEccccC-CCeEEEeeeCCCHHHHHHHHHHHHHHhcCcccccCCCCc
Confidence            7999998899999999999876 689999999999999999999999999999999999975

>1u3e_M HNH homing endonuclease; HNH catalytic motif, helix-turn-helix DNA binding domain, PR complex, DNA binding protein-DNA complex; 2.92A {Bacillus phage SPO1} SCOP: d.4.1.3 d.285.1.1

Probab=95.68  E-value=0.00026  Score=53.00  Aligned_cols=63  Identities=5%  Similarity=-0.162  Sum_probs=44.8

Q ss_pred             CcCCCCCCchhhHhhhhccCCCCCCCceeeeEECCCCeeEEEEecCCCCCCcEEEeCCCCCHHHHHHHHH
Q 041658            2 TWSDSNSNDAASATATIRTRESHAPRSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYD   71 (139)
Q Consensus         2 ~~~n~~~~~~~~~~~~~r~~~~~~~s~yrGV~~~~~gkw~A~I~~~~~~~gk~~~LG~f~t~eeAA~AYD   71 (139)
                      .++||+-.+..++...........  .++||.....++|.+.|...     +.++||.|+|.+|||++|.
T Consensus        84 ~~~NL~~~t~~eN~~~~~~~~~~~--~~~g~~~~~~~k~~~vi~~~-----~~~~~~~f~s~~eAa~~~G  146 (174)
T 1u3e_M           84 LSTNLRWVTQKINVENQMSRGTLN--VSKAQQIAKIKNQKPIIVIS-----PDGIEKEYPSTKCACEELG  146 (174)
T ss_dssp             CGGGEEEECHHHHHHHHHHHTCCC--CHHHHHHHHHHTCCCEEEEC-----TTSCEEEESCHHHHHHHHT
T ss_pred             CHHHcEECCHHHHhhcccccCccc--ceeeeeeccCCCCceEEEEc-----CCceEEeeCCHHHHHHHHC
Confidence            367888888888777665443222  25677443336788999883     4667999999999999974

>3igm_B PF14_0633 protein; AP2 domain, specific transcription FA protein-DNA complex, transcription-DNA complex; 2.20A {Plasmodium falciparum}

Probab=92.36  E-value=0.04  Score=36.80  Aligned_cols=25  Identities=24%  Similarity=0.296  Sum_probs=19.7

Q ss_pred             CCCCceeeeEEC-CCCeeEEEEecCC
Q 041658           24 HAPRSFRGVRRR-PWGKFGAEIRDGK   48 (139)
Q Consensus        24 ~~~s~yrGV~~~-~~gkw~A~I~~~~   48 (139)
                      +.+|+|.||++. ..+.|.|.+.+.+
T Consensus         3 ~~~Sg~pGVsw~kR~~~WlA~W~e~g   28 (77)
T 3igm_B            3 HMSSGYPGVSWNKRMCAWLAFFYDGA   28 (77)
T ss_dssp             -CCSSSTTEEEETTTTEEEEEEEETT
T ss_pred             CCCCCCCcEEeecCCceEEEEEecCC
Confidence            457899999666 5599999999943

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	139
d1gcca_	63	d.10.1.2 (A:) GCC-box binding domain {Mouse-ear cr	1e-26

>d1gcca_ d.10.1.2 (A:) GCC-box binding domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 63

class: Alpha and beta proteins (a+b)
fold: DNA-binding domain
superfamily: DNA-binding domain
family: GCC-box binding domain
domain: GCC-box binding domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 92.8 bits (231), Expect = 1e-26
 Identities = 44/61 (72%), Positives = 49/61 (80%), Gaps = 1/61 (1%)

Query: 27 RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNF 86
          + +RGVR+RPWGKF AEIRD    NG RVWLGTF T EDAALAYDRAAFR+ G +A LNF
Sbjct: 1  KHYRGVRQRPWGKFAAEIRDPA-KNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNF 59

Query: 87 P 87
          P
Sbjct: 60 P 60

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	139
d1gcca_	63	GCC-box binding domain {Mouse-ear cress (Arabidops	99.94

>d1gcca_ d.10.1.2 (A:) GCC-box binding domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: DNA-binding domain
superfamily: DNA-binding domain
family: GCC-box binding domain
domain: GCC-box binding domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.94  E-value=7e-28  Score=156.77  Aligned_cols=61  Identities=72%  Similarity=1.221  Sum_probs=57.8

Q ss_pred             ceeeeEECCCCeeEEEEecCCCCCCcEEEeCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 041658           28 SFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGKKAKLNFPRF   89 (139)
Q Consensus        28 ~yrGV~~~~~gkw~A~I~~~~~~~gk~~~LG~f~t~eeAA~AYD~aa~~~~G~~a~lNFp~~   89 (139)
                      +||||+++++|||+|+|+++.+ +++++|||+|+|+||||+|||.++++++|+++.+|||+.
T Consensus         2 ~yrGVr~r~~gkw~A~Ir~~~~-~~~r~~LGtf~t~eeAArAYD~aa~~~~G~~a~~NFP~~   62 (63)
T d1gcca_           2 HYRGVRQRPWGKFAAEIRDPAK-NGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR   62 (63)
T ss_dssp             CCTTEEEETTTEEEEEEEETTT-TSEEEEEEEESSHHHHHHHHHHHHHHHHSSCCCCSSCTT
T ss_pred             CcceEeECCCCCEEEEEecCCC-CCcEeccccccCHHHHHHHHHHHHHHhcCCCcccCCCcc
Confidence            6999998889999999999877 689999999999999999999999999999999999975