Citrus Sinensis ID: 041667

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------66

MSSGFPGGGGGGPDLYSGLAAGGRSITMNGNQLSHQPSYRSSQLPGIFMDQMTSSPQIANRNLIGKRTFNDYQITHHHHQQQQQLFQQNHINPAMNSLFLRSVKPRTYQNLSPISPLDFSPNNINNNNNNVLSPDLQQSLPLSHRYNLPLLQQQLQQQQQPRLYQQHQQQQHVALVSNTIPYVDNNNTVPSYNNRVQVQGQESEKKMLNRLQELEKQLLDDEEEGDDVSVITNTNSEWSETIQNLITFSPKQTVSSIRPLAPSPTTSSSSCSSSSVASPATSCSKQTVIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVKEENGGICFGWMGRTLTVVSAWR

ccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccccccccccccHHHHHHHHHcHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccccEEEEEcccccccccHHHHHHHHHcccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHcccEEEEEEEccccccccccccccccccEEEEEccccccccccccccccccHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccEEEECccEEEEECccccEEEEEccc

*********GGGPDLYS***************************************************FNDYQ********************************************************************************************************************************************************************WSETIQNLITF**************************************TVIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPH**************AESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVKEENGGICFGWMGRTLTVVSAWR

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MSSGFPGGGGGGPDLYSGLAAGGRSITMNGNQLSHQPSYRSSQLPGIFMDQMTSSPQIANRNLIGKRTFNDYQITHHHHQQQQQLFQQNHINPAMNSLFLRSVKPRTYQNLSPISPLDFSPNNINNNNNNVLSPDLQQSLPLSHRYNLPLLQQQLQQQQQPRLYQQHQQQQHVALVSNTIPYVDNNNTVPSYNNRVQVQGQESxxxxxxxxxxxxxxxxxxxxxGDDVSVITNTNSEWSETIQNLITFSPKQTVSSIRPLAPSPTTSSSSCSSSSVASPATSCSKQTVIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVKEENGGICFGWMGRTLTVVSAWR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Scarecrow-like protein 8	Probable transcription factor involved in plant development.	probable	Q9FYR7

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1TW3, chain A
Confidence level:confident
Coverage over the Query: 376-529
View the alignment between query and template
View the model in PyMOL

Template: 4A6D, chain A
Confidence level:probable
Coverage over the Query: 375-539,550-554,578-612
View the alignment between query and template
View the model in PyMOL

Template: 3GIW, chain A
Confidence level:probable
Coverage over the Query: 357-525
View the alignment between query and template
View the model in PyMOL