Citrus Sinensis ID: 041801

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340---
MAVSAGFEGFEKRLELHFFGDDPLNNLIDNEMGLRLLDFESLQEVLDAVQCTVVSAVGNQYFDAYVLSESSLFVYPTKIIIKTCGTTQLLKSIRPLVDYAHDLNLTLCACRYTRGSFIFPKSQPFPHTSFKEEVFYLEENLPINLCYRKASVMPSKLASHSWHVFTASDAQATTRQLVSGDVNATFTLEICMTELDRTMAKNGDTAGKEMTELTGIGGINPNPNSIICDFAFDPCGYSMNGVDGDRYSTIHVTPEDGFSYASFECVGSVYDDHDEVAQMLKRVVQVFKPATMSVSTTCTSHEVWTRVVHAIEPLGLKCRSCVMDEFPAAGSVVFQTFTATRRK
cccccccccccEEEEEEECcccccccccccccccccccHHHHHHHHHccccEEEEEEEccccEEEEEEccCEEECccEEEEEcccHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccEEEEccccccccccccccccccccEEEEEEcccccHHHHHcccccHHHHHHHHccccccccccccccccccccccccccccccccEEEEEEccccccEEEEEEEcccccccHHHHHHHHHHHHHcccccCEEEEEEcccccHHHHHHccccccccEEcccEEEEcccccEEEEEEEEEcccc
*AVSAGFEGFEKRLELHFFGDDPLNN****EMGLRLLDFESLQEVLDAVQCTVVSAVGNQYFDAYVLSESSLFVYPTKIIIKTCGTTQLLKSIRPLVDYAHDLNLTLCACRYTRGSFIFPKSQPFPHTSFKEEVFYLEENLPINLCYRKASVMPSKLASHSWHVFTASDAQ**********VNATFTLEICMTELDRTMAKNGDTAGKEMTELTGIGGINPNPNSIICDFAFDPCGYSMNGVDGDRYSTIHVTPEDGFSYASFECVGSVYDDHDEVAQMLKRVVQVFKPATMSVSTTCTSHEVWTRVVHAIEPLGLKCRSCVMDEFPAAGSVVFQTFTAT***
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MAVSAGFEGFEKRLELHFFGDDPLNNLIDNEMGLRLLDFESLQEVLDAVQCTVVSAVGNQYFDAYVLSESSLFVYPTKIIIKTCGTTQLLKSIRPLVDYAHDLNLTLCACRYTRGSFIFPKSQPFPHTSFKEEVFYLEENLPINLCYRKASVMPSKLASHSWHVFTASDAQATTRQLVSGDVNATFTLEICMTELDRTMAKNGDTAGKEMTELTGIGGINPNPNSIICDFAFDPCGYSMNGVDGDRYSTIHVTPEDGFSYASFECVGSVYDDHDEVAQMLKRVVQVFKPATMSVSTTCTSHEVWTRVVHAIEPLGLKCRSCVMDEFPAAGSVVFQTFTATRRK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
S-adenosylmethionine decarboxylase proenzyme 1 probableP31154
S-adenosylmethionine decarboxylase proenzyme probableP17707
S-adenosylmethionine decarboxylase proenzyme 2 probableP82184

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
4.-.-.-Lyases.probable
4.1.-.-Carbon-carbon lyases.probable
4.1.1.-Carboxy-lyases.probable
4.1.1.50Adenosylmethionine decarboxylase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1MHM, chain A
Confidence level:very confident
Coverage over the Query: 71-116,128-340
View the alignment between query and template
View the model in PyMOL
Template: 1JL0, chain A
Confidence level:very confident
Coverage over the Query: 5-341
View the alignment between query and template
View the model in PyMOL