Citrus Sinensis ID: 041821
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 736 | 2.2.26 [Sep-21-2011] | |||||||
| P17801 | 817 | Putative receptor protein | N/A | no | 0.978 | 0.881 | 0.466 | 0.0 | |
| Q9XID3 | 829 | G-type lectin S-receptor- | yes | no | 0.898 | 0.797 | 0.326 | 2e-86 | |
| O64477 | 828 | G-type lectin S-receptor- | no | no | 0.915 | 0.814 | 0.323 | 6e-86 | |
| Q9FLV4 | 872 | G-type lectin S-receptor- | no | no | 0.926 | 0.782 | 0.318 | 5e-85 | |
| Q39203 | 797 | G-type lectin S-receptor- | no | no | 0.894 | 0.825 | 0.321 | 6e-79 | |
| O65238 | 872 | G-type lectin S-receptor- | no | no | 0.918 | 0.775 | 0.298 | 6e-74 | |
| O81906 | 849 | G-type lectin S-receptor- | no | no | 0.918 | 0.796 | 0.275 | 4e-71 | |
| O64771 | 809 | G-type lectin S-receptor- | no | no | 0.873 | 0.794 | 0.272 | 2e-69 | |
| O64782 | 805 | G-type lectin S-receptor- | no | no | 0.885 | 0.809 | 0.294 | 4e-69 | |
| O64777 | 806 | G-type lectin S-receptor- | no | no | 0.889 | 0.812 | 0.275 | 2e-68 |
| >sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2 | Back alignment and function desciption |
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Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/767 (46%), Positives = 482/767 (62%), Gaps = 47/767 (6%)
Query: 2 TFSCGFYGLGGNAYLFSIWFTHSR-----DRTVVWTANRDRPVNGQGSRASLRRNGAMVL 56
TFS GFY + +A+ FS+W++ + ++T+VW+AN DRPV+ + S +L+++G MVL
Sbjct: 54 TFSSGFYEVYTHAFTFSVWYSKTEAAAANNKTIVWSANPDRPVHARRSALTLQKDGNMVL 113
Query: 57 TDVDDTVIWMTNTTS-TGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKS 115
TD D +W + + TG RA LLDTGNLV++D G +WQSFD PTDT LP Q+ +
Sbjct: 114 TDYDGAAVWRADGNNFTGVQRARLLDTGNLVIEDSGGNTVWQSFDSPTDTFLPTQLITAA 173
Query: 116 TKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQNGRTKYNSSR 175
T+L+ + + G + F + +VL LIY P++S +YWPDPD +++Q+GR +YNS+R
Sbjct: 174 TRLVPTTQ--SRSPGNYIFRFSDLSVLSLIYHVPQVSDIYWPDPDQNLYQDGRNQYNSTR 231
Query: 176 IAVLDDFGSFSSSDELKFSAI---DMGFGIKRRLTMDYDGNLRLYSLNKVTGSWMISWQA 232
+ +L D G +SSD A+ D+G G+KRRLT+D DGNLRLYS+N GSW +S A
Sbjct: 232 LGMLTDSGVLASSDFADGQALVASDVGPGVKRRLTLDPDGNLRLYSMNDSDGSWSVSMVA 291
Query: 233 LMQPGKVHGVCGKNGICVYTPEPKCSCPPGYEATEPGDWSKGCKPKFNRTCSS-SLTEVK 291
+ QP +HG+CG NGIC Y+P P CSCPPGY PG+W++GC N TC ++
Sbjct: 292 MTQPCNIHGLCGPNGICHYSPTPTCSCPPGYATRNPGNWTEGCMAIVNTTCDRYDKRSMR 351
Query: 292 FVGVPNTDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKSVLFNGFKA 351
FV +PNTDF+G D + +VS C +C+ DC C GF Y+ G G C+ K+ LF+G
Sbjct: 352 FVRLPNTDFWGSDQQHLLSVSLRTCRDICISDCTCKGFQYQ-EGTGSCYPKAYLFSGRTY 410
Query: 352 PNFP-GIIYLKLPVSVEASEPAILNG----TNPV---CRLSKSQIVIGSPSMYDTTAKRV 403
P IYLKLP V S I + P C I P ++ T
Sbjct: 411 PTSDVRTIYLKLPTGVSVSNALIPRSDVFDSVPRRLDCDRMNKSIREPFPDVHKTGGGES 470
Query: 404 RWSYFYWFALAIGAIEVFVIASGWWLLFRRQDVPSSL---EEGYQALSSQFRRFSYAELK 460
+W YFY F A +EV I+ W+ + +R+ PS L E+GY+A++S FRR+SY EL
Sbjct: 471 KWFYFYGFIAAFFVVEVSFISFAWFFVLKRELRPSELWASEKGYKAMTSNFRRYSYRELV 530
Query: 461 KSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLV 520
K+T+ FK ELGRG SG VYKGVL D R VAVK+L ++ QG+EVF AE+S IG+I HMNLV
Sbjct: 531 KATRKFKVELGRGESGTVYKGVLEDDRHVAVKKLENVRQGKEVFQAELSVIGRINHMNLV 590
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFS---SYFLGWKERFKVALGTAKGLAYLHHD- 576
R+WGFCSEG HRLL+ EYVE SL LFS + L W+ RF +ALG AKGLAYLHH+
Sbjct: 591 RIWGFCSEGSHRLLVSEYVENGSLANILFSEGGNILLDWEGRFNIALGVAKGLAYLHHEC 650
Query: 577 ------------------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
FEPKI DFGL KL RG ++ S +RGT GY+APEW S+L
Sbjct: 651 LEWVIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSHVRGTLGYIAPEWVSSL 710
Query: 619 PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678
PITAKVDVYSYGVV+LE++ G R+S V E + L++ VR + K+ EE++WI+
Sbjct: 711 PITAKVDVYSYGVVLLELLTGTRVSELVGGTDE-VHSMLRKLVRMLSAKLEGEEQSWIDG 769
Query: 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725
+D +L N QA TLI + +SC++EDRSKRPTM+ VQ+LL +
Sbjct: 770 YLDSKLNRPVNYVQARTLIKLAVSCLEEDRSKRPTMEHAVQTLLSAD 816
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Probable receptor. Interaction with a ligand in the extracellular domain triggers the protein kinase activity of the cytoplasmic domain. Zea mays (taxid: 4577) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana GN=At1g34300 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 254/779 (32%), Positives = 368/779 (47%), Gaps = 118/779 (15%)
Query: 2 TFSCGFY-GLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVD 60
TFS F N++L ++ F S +W+A V+ +GS L +G++ LT+
Sbjct: 48 TFSVSFVPSPSPNSFLAAVSFAGS---VPIWSAGT---VDSRGS-LRLHTSGSLRLTNGS 100
Query: 61 DTVIWMTNTTSTGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLIS 120
T +W + T G + DTG +L + +W SFD PTDT++ +Q F L S
Sbjct: 101 GTTVWDSKTDRLGVTSGSIEDTGEFILLNNRSVPVWSSFDNPTDTIVQSQNFTAGKILRS 160
Query: 121 GVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPD------------PDFDVFQNGR 168
G+ +S + L L ++ S++YW P + NG
Sbjct: 161 GL---------YSFQLERSGNLTLRWN---TSAIYWNHGLNSSFSSNLSSPRLSLQTNGV 208
Query: 169 TKYNSSRI---AVLDDFGSFSSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYS-LNKVTG 224
S + A + G + S+ +F L +D DGNLR+YS ++ +G
Sbjct: 209 VSIFESNLLGGAEIVYSGDYGDSNTFRF------------LKLDDDGNLRIYSSASRNSG 256
Query: 225 SWMISWQALMQPGKVHGVCGKNGICVYT-PEPKCSCPP-GYEATEPGDWSKGCKPKFNRT 282
W A+ Q V+G CG GIC Y P CSCP ++ + D KGCK K +
Sbjct: 257 PVNAHWSAVDQ-CLVYGYCGNFGICSYNDTNPICSCPSRNFDFVDVNDRRKGCKRKVELS 315
Query: 283 -CSSSLTEVKFVGVPNTDFYGFDLNYSQT---VSKEACMKLCLDDCRCSGFSYRLTGQGL 338
CS + T + V +T + ++ + + C CL C G G
Sbjct: 316 DCSGNTTMLDLV---HTRLFTYEDDPNSESFFAGSSPCRANCLSSVLCLASVSMSDGSGN 372
Query: 339 CFTK--SVLFNGFKAPNFPGIIYLKLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSMY 396
C+ K F G++ P+ P Y+K+ V A N + R +K
Sbjct: 373 CWQKHPGSFFTGYQWPSVPSTSYVKVCGPVVA---------NTLERATKGD--------- 414
Query: 397 DTTAKRVRWSYFYWFALAIGAIEVFVIASG-WWLLFRRQDVPSSLEEGYQAL---SSQFR 452
D +K W A+ G + + + G WW R+ +L Y L S
Sbjct: 415 DNNSKVHLW--IVAVAVIAGLLGLVAVEIGLWWCCCRKNPRFGTLSSHYTLLEYASGAPV 472
Query: 453 RFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIG 512
+F+Y EL++ TKSFKE+LG GG G VY+GVL + VAVK+L + QGE+ F EV+TI
Sbjct: 473 QFTYKELQRCTKSFKEKLGAGGFGTVYRGVLTNRTVVAVKQLEGIEQGEKQFRMEVATIS 532
Query: 513 KIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF---SSYFLGWKERFKVALGTAKG 569
+H+NLVR+ GFCS+GRHRLL+YE++ SLD LF S+ FL W+ RF +ALGTAKG
Sbjct: 533 STHHLNLVRLIGFCSQGRHRLLVYEFMRNGSLDNFLFTTDSAKFLTWEYRFNIALGTAKG 592
Query: 570 LAYLHH-------------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYM 610
+ YLH D F K++DFGLAKL N S +RGT+GY+
Sbjct: 593 ITYLHEECRDCIVHCDIKPENILVDDNFAAKVSDFGLAKLLNPKDNRYNMSSVRGTRGYL 652
Query: 611 APEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILY 670
APEW +NLPIT+K DVYSYG+V+LE+V G R N+ V ++ K+F +
Sbjct: 653 APEWLANLPITSKSDVYSYGMVLLELVSGKR--NFDVS----EKTNHKKFSIWAYEEF-- 704
Query: 671 EEEAWIEEIVDPRLK--GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727
E+ + I+D RL + Q ++ C+ E +RPTM VVQ +LE TE
Sbjct: 705 -EKGNTKAILDTRLSEDQTVDMEQVMRMVKTSFWCIQEQPLQRPTMGKVVQ-MLEGITE 761
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 319 bits (817), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 249/769 (32%), Positives = 372/769 (48%), Gaps = 95/769 (12%)
Query: 2 TFSCGFYGLGGNA-YLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVD 60
T+ GF+ G ++ + +W+ +T++W ANRD+ V+ + S NG ++L D +
Sbjct: 44 TYEMGFFKPGSSSNFYIGMWYKQ-LSQTILWVANRDKAVSDKNSSVFKISNGNLILLDGN 102
Query: 61 -DTVIWMT---NTTSTGADRAELLDTGNLVLK----DRHGKILWQSFDYPTDTLLPNQVF 112
T +W T +T+S A A L D GNLVL+ +LWQSFD+P DT LP
Sbjct: 103 YQTPVWSTGLNSTSSVSALEAVLQDDGNLVLRTGGSSLSANVLWQSFDHPGDTWLPGVKI 162
Query: 113 R------KSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWP----DPDFD 162
R KS +L S + G FSL D +++++G S+ YW +P
Sbjct: 163 RLDKRTGKSQRLTSWKSLEDPSPGLFSLELDESTAYKILWNG---SNEYWSSGPWNPQSR 219
Query: 163 VFQNGRTKYNSSRIAVLDDFGSFSSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKV 222
+F + R+ + +F FS++ + F+ R MD G ++ ++ +
Sbjct: 220 IFDS----VPEMRLNYIYNFSFFSNTTDSYFTYSIYNQLNVSRFVMDVSGQIKQFTWLEG 275
Query: 223 TGSWMISWQALMQPGKVHGVCGKNGICVYTPEPKCSCPPGYEATEPGDW-----SKGCKP 277
+W + W Q +V+ CG GIC EP C CP G+ DW S GC
Sbjct: 276 NKAWNLFWSQPRQQCQVYRYCGSFGICSDKSEPFCRCPQGFRPMSQKDWDLKDYSAGCVR 335
Query: 278 KFNRTCSSSLTEVKFVGVPNTDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQG 337
K CS +F +PN L + V + +C C QG
Sbjct: 336 KTELQCSRGDIN-QFFRLPN-----MKLADNSEVLTRTSLSICASAC-----------QG 378
Query: 338 LCFTKSVLFNGFKAPNFPGIIYLKLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSMYD 397
C K+ ++ + +++ K ++++ E G RL+ S + P++
Sbjct: 379 DCSCKAYAYDEGSSK---CLVWSKDVLNLQQLEDENSEGNIFYLRLAASDV----PNVGA 431
Query: 398 TTAKRVRWSYFYWFALAIGAIEVFVIASGWWLLFRRQDVPSSLEEGYQALSSQFRRFSYA 457
+ + F ++G I + ++ L +RR+ E+G LS+ FSY
Sbjct: 432 SGKSNNKGLIFGAVLGSLGVIVLVLLVVILILRYRRRKRMRG-EKGDGTLSA----FSYR 486
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
EL+ +TK+F ++LG GG G+V+KG L D +AVKRL + QGE+ F EV TIG I H+
Sbjct: 487 ELQNATKNFSDKLGGGGFGSVFKGALPDSSDIAVKRLEGISQGEKQFRTEVVTIGTIQHV 546
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF-----SSYFLGWKERFKVALGTAKGLAY 572
NLVR+ GFCSEG +LL+Y+Y+ SLD HLF LGWK RF++ALGTA+GLAY
Sbjct: 547 NLVRLRGFCSEGSKKLLVYDYMPNGSLDSHLFLNQVEEKIVLGWKLRFQIALGTARGLAY 606
Query: 573 LHHD-------------------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE 613
LH + +F PK+ADFGLAKL R S + +RGT+GY+APE
Sbjct: 607 LHDECRDCIIHCDIKPENILLDSQFCPKVADFGLAKLVGR-DFSRVLTTMRGTRGYLAPE 665
Query: 614 WASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673
W S + ITAK DVYSYG+++ E+V G R + E E E RF IL ++
Sbjct: 666 WISGVAITAKADVYSYGMMLFELVSGRR-------NTEQSENEKVRFFPSWAATIL-TKD 717
Query: 674 AWIEEIVDPRLKG-KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
I +VDPRL+G + + + C+ ++ S RP M VVQ L
Sbjct: 718 GDIRSLVDPRLEGDAVDIEEVTRACKVACWCIQDEESHRPAMSQVVQIL 766
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 316 bits (809), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 258/809 (31%), Positives = 381/809 (47%), Gaps = 127/809 (15%)
Query: 2 TFSCGFYGLG-GNAYLFSIWFTH-SRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDV 59
TF+ GF + +L SIWF D T+VW+ NR+ PV + L G +VL+D
Sbjct: 51 TFAIGFTRFKPTDRFLLSIWFAQLPGDPTIVWSPNRNSPVTKEAV-LELEATGNLVLSD- 108
Query: 60 DDTVIWMTNTTSTGADRAELLDTGNLVL---KDRHGKILWQSFDYPTDTLLPNQVFRKST 116
+TV+W +NT++ G + A + ++GN +L + G +WQSF P+DTLLPNQ S
Sbjct: 109 QNTVVWTSNTSNHGVESAVMSESGNFLLLGTEVTAGPTIWQSFSQPSDTLLPNQPLTVSL 168
Query: 117 KLISGVGNGTYASGYFSLYFDNDNV---LRLIYD---GPEISSVYWPDPDFDVFQNGRTK 170
+L S + G++SL + L L Y+ P + YW PD T
Sbjct: 169 ELTSNPSPSRH--GHYSLKMLQQHTSLSLGLTYNINLDPHANYSYWSGPDISNVTGDVT- 225
Query: 171 YNSSRIAVLDDFGSFS-----------------SSDELKFS-AIDMGFG---IKRRLTMD 209
AVLDD GSF D ++ + ++G + RRL ++
Sbjct: 226 ------AVLDDTGSFKIVYGESSIGAVYVYKNPVDDNRNYNNSSNLGLTKNPVLRRLVLE 279
Query: 210 YDGNLRLYSL-NKVTGS--WMISWQALMQPGKVHGVCGKNGICVYTPEPK---CSCPPGY 263
+GNLRLY N + GS W+ W A+ P + G+CG NG+C K C C PG
Sbjct: 280 NNGNLRLYRWDNDMNGSSQWVPEWAAVSNPCDIAGICG-NGVCNLDRTKKNADCLCLPGS 338
Query: 264 EATEPGDWSKGC--KPKFNRTCSSSLTE---VKFVGVPNTDFYGFDLNYSQTVSK----E 314
+ +K C + C S++ K V T++Y + + + +S
Sbjct: 339 VKLPDQENAKLCSDNSSLVQECESNINRNGSFKISTVQETNYYFSERSVIENISDISNVR 398
Query: 315 ACMKLCLDDCRCSGFSYRLTGQG-LCFT-KSVLFNGFKAPNFPGIIYLKLPVSVEASEPA 372
C ++CL DC+C Y L + C+ KS+ F GF+ P + + S ++
Sbjct: 399 KCGEMCLSDCKCVASVYGLDDEKPYCWILKSLNFGGFRDPGSTLFVKTRANESYPSNSNN 458
Query: 373 ILNGTNPVCRLSKSQIVIGSPSMYDTTAKRVRWSYFYWFALAIGAIEVFVIASGWWLLFR 432
+ + L + +VI + +G + ++A LL+
Sbjct: 459 NDSKSRKSHGLRQKVLVI---------------------PIVVGML--VLVALLGMLLYY 495
Query: 433 RQDVPSSLEEGYQ---ALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAV 489
D +L+ + L F+Y +L+ T +F + LG GG G VYKG +A V
Sbjct: 496 NLDRKRTLKRAAKNSLILCDSPVSFTYRDLQNCTNNFSQLLGSGGFGTVYKGTVAGETLV 555
Query: 490 AVKRLG-DLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL 548
AVKRL L GE F EV+TIG ++HMNLVR+ G+CSE HRLL+YEY+ SLDK +
Sbjct: 556 AVKRLDRALSHGEREFITEVNTIGSMHHMNLVRLCGYCSEDSHRLLVYEYMINGSLDKWI 615
Query: 549 FSS----YFLGWKERFKVALGTAKGLAYLHH-------------------DEFEPKIADF 585
FSS L W+ RF++A+ TA+G+AY H D F PK++DF
Sbjct: 616 FSSEQTANLLDWRTRFEIAVATAQGIAYFHEQCRNRIIHCDIKPENILLDDNFCPKVSDF 675
Query: 586 GLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRL--S 643
GLAK+ R +S + IRGT+GY+APEW SN PIT K DVYSYG+++LE+V G R
Sbjct: 676 GLAKMMGR-EHSHVVTMIRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDM 734
Query: 644 NWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISC 703
++ ED K K VD RL+G + + + C
Sbjct: 735 SYDAEDFFYPGWAYKELTNGTSLKA-----------VDKRLQGVAEEEEVVKALKVAFWC 783
Query: 704 VDEDRSKRPTMDSVVQSLLECETESEIHI 732
+ ++ S RP+M VV+ LLE T EI++
Sbjct: 784 IQDEVSMRPSMGEVVK-LLE-GTSDEINL 810
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS=Arabidopsis thaliana GN=SD22 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 296 bits (757), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 244/760 (32%), Positives = 360/760 (47%), Gaps = 102/760 (13%)
Query: 3 FSCGFYGL--GGNAYLFSIWFTHSRDRTVVWTANRDRPV-NGQGSRASLRRNGAMVLTDV 59
F GF+ G + + I + T VW ANR RPV + S L G ++++++
Sbjct: 40 FRLGFFSTTNGSSNWYLGISYASMPTPTHVWVANRIRPVSDPDSSTLELTSTGYLIVSNL 99
Query: 60 DDTVIWMTNTTSTGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLI 119
D V+W T+ G D +TGNL+L + G +WQSFD PTDT LP T +
Sbjct: 100 RDGVVWQTDNKQPGTD-FRFSETGNLILINDDGSPVWQSFDNPTDTWLPGMNVTGLTAMT 158
Query: 120 SGVGNGTYASGYFSLYFDND-NVLRLIYDG--PEISSVYWPDPDFDVFQNGRTKYNSSRI 176
S + G++SL N +L+Y G P S+ W F G + I
Sbjct: 159 SWRSLFDPSPGFYSLRLSPSFNEFQLVYKGTTPYWSTGNWTGEAF----VGVPEMTIPYI 214
Query: 177 AVLDDFGSFSSSDELKFSAIDMGFGIKRRLT---MDYDGNLRLYSLNKVTGSWMISWQAL 233
++ + + + + RLT + +G L+ Y+ + T SW + W
Sbjct: 215 YRFHFVNPYTPTASFWYIVPPLDSVSEPRLTRFMVGANGQLKQYTWDPQTQSWNMFWLQP 274
Query: 234 MQPGKVHGVCGKNGICVYTPEPKCSCPPGYE-----ATEPGDWSKGCKPKFNRTCSSSLT 288
P +V+ +CG+ G C C+C G+ A D+S GC+ + + S T
Sbjct: 275 EDPCRVYNLCGQLGFCSSELLKPCACIRGFRPRNDAAWRSDDYSDGCRRENGDSGEKSDT 334
Query: 289 EVKFVGVPNTDFYGFDLNYSQ-TVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKSVLFN 347
F V + + G D+ S+ VSK +C K CL + C GF Y LC
Sbjct: 335 ---FEAVGDLRYDG-DVKMSRLQVSKSSCAKTCLGNSSCVGF-YHKEKSNLC-------- 381
Query: 348 GFKAPNFPGIIYLKLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSMYDTTAKRVRWSY 407
I L+ P +++ S+ I +C + S V+G
Sbjct: 382 ---------KILLESPNNLKNSKGNISKSIIILCSVVGSISVLG---------------- 416
Query: 408 FYWFALAIGAIEVFVIASGWWLLFRRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFK 467
F L + I + S R+QD E+G+ L+ + FS+ EL+ +T F
Sbjct: 417 ---FTLLVPLI--LLKRSRKRKKTRKQD-----EDGFAVLN--LKVFSFKELQSATNGFS 464
Query: 468 EELGRGGSGAVYKGVLADGRA-VAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFC 526
+++G GG GAV+KG L VAVKRL GE F AEV TIG I H+NLVR+ GFC
Sbjct: 465 DKVGHGGFGAVFKGTLPGSSTFVAVKRLERPGSGESEFRAEVCTIGNIQHVNLVRLRGFC 524
Query: 527 SEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKERFKVALGTAKGLAYLH--------HD 576
SE HRLL+Y+Y+ + SL +L S L W+ RF++ALGTAKG+AYLH H
Sbjct: 525 SENLHRLLVYDYMPQGSLSSYLSRTSPKLLSWETRFRIALGTAKGIAYLHEGCRDCIIHC 584
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVD 625
+ +P K++DFGLAKL R S + +RGT GY+APEW S LPIT K D
Sbjct: 585 DIKPENILLDSDYNAKVSDFGLAKLLGR-DFSRVLATMRGTWGYVAPEWISGLPITTKAD 643
Query: 626 VYSYGVVILEMVKGIRLSNWVVED---GEGQ-EAELKRFVREVKRKILYEEEAWIEEIVD 681
VYS+G+ +LE++ G R N +V GE + E E F R+I+ + ++ +VD
Sbjct: 644 VYSFGMTLLELIGGRR--NVIVNSDTLGEKETEPEKWFFPPWAAREII---QGNVDSVVD 698
Query: 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
RL G++NT + + + I C+ ++ RP M +VV+ L
Sbjct: 699 SRLNGEYNTEEVTRMATVAIWCIQDNEEIRPAMGTVVKML 738
|
Serine/threonine-protein kinase. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O65238|Y5537_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 279 bits (714), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 234/784 (29%), Positives = 364/784 (46%), Gaps = 108/784 (13%)
Query: 3 FSCGFYGLGGNAYLFSIWFT--HSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVD 60
F G + GG+ +F+ H + +W++NRD PV+ G+ +L G V+ D
Sbjct: 57 FKAGLFSPGGDDSSTGFYFSVVHVDSGSTIWSSNRDSPVSSSGT-MNLTPQGISVIEDGK 115
Query: 61 DTV-IWMTNTTSTGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLI 119
+ +W T ++ L D GNL+L D LW+SFD+PTD+++ Q + L
Sbjct: 116 SQIPVWSTPVLASPVKSLRLTDAGNLLLLDHLNVSLWESFDFPTDSIVLGQRLKLGMFLS 175
Query: 120 SGVGNGTYASG-YFSLYFDNDNVLRLIYDGPEISSVYWP---DPDFDVFQNGRTKY---N 172
V +++G Y L ++D +++ + G YW +V N +Y
Sbjct: 176 GSVSRSDFSTGDYKFLVGESDGLMQ--WRGQN----YWKLRMHIRANVDSNFPVEYLTVT 229
Query: 173 SSRIAVLDDFGSFSSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKVTGSWMIS-WQ 231
+S +A++ G+ + D R MD G + +++ +G +++ +
Sbjct: 230 TSGLALMARNGTVVVVRVALPPSSDF-----RVAKMDSSGK---FIVSRFSGKNLVTEFS 281
Query: 232 ALMQPGKVHGVCGKNGICVY---TPEPKCSCPPGYEATEPGDWSKG-CKPKFNRTCSSSL 287
M ++ VCGK G+C + CSCP D KG C P S SL
Sbjct: 282 GPMDSCQIPFVCGKLGLCNLDNASENQSCSCPDEMRM----DAGKGVCVP-----VSQSL 332
Query: 288 TEVKFVGVPNTDFY--GFDLNYSQT---------VSKEACMKLCLDDCRCSGFSYRLTGQ 336
+ N + G ++Y T + AC +C +C C G Y T +
Sbjct: 333 SLPVSCEARNISYLELGLGVSYFSTHFTDPVEHGLPLLACHDICSKNCSCLGVFYENTSR 392
Query: 337 GLCFTKSVLFNGFKAPNFPG----IIYLKLPVSVEASEPAILNGTNPVCRLSKSQIVIGS 392
K + N P I Y+KL + ++P N
Sbjct: 393 SCYLVKDSFGSLSLVKNSPENHDLIGYVKLSIRKTNAQPPGNNNRGG------------- 439
Query: 393 PSMYDTTAKRVRWSYFYWFALAIGAIEVFVIASGWWLLFRRQDV--PSSLEEGYQA---L 447
S + A + ++ +A+G + A + R + V P S E G +
Sbjct: 440 -SSFPVIALVLLPCSGFFLLIALGLLWWRRCAVMRYSSIREKQVTRPGSFESGDLGSFHI 498
Query: 448 SSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGD--LHQGEEVFW 505
++F + EL+++T++FK ++G GG G+VYKG L D +AVK++ + LH G + F
Sbjct: 499 PGLPQKFEFEELEQATENFKMQIGSGGFGSVYKGTLPDETLIAVKKITNHGLH-GRQEFC 557
Query: 506 AEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVA 563
E++ IG I H NLV++ GFC+ GR LL+YEY+ SL+K LFS L W+ERF +A
Sbjct: 558 TEIAIIGNIRHTNLVKLRGFCARGRQLLLVYEYMNHGSLEKTLFSGNGPVLEWQERFDIA 617
Query: 564 LGTAKGLAYLH-------------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIR 604
LGTA+GLAYLH HD F+PKI+DFGL+KL + SS F+ +R
Sbjct: 618 LGTARGLAYLHSGCDQKIIHCDVKPENILLHDHFQPKISDFGLSKLLNQ-EESSLFTTMR 676
Query: 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIR------LSNWVVEDGEGQEAELK 658
GT+GY+APEW +N I+ K DVYSYG+V+LE+V G + SN V ED +
Sbjct: 677 GTRGYLAPEWITNAAISEKADVYSYGMVLLELVSGRKNCSFRSRSNSVTEDNNQNHSSTT 736
Query: 659 RFVREVKRKILY----EEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM 714
+ LY E+ E+ DPRL+G+ + +A L+ I + CV E+ + RPTM
Sbjct: 737 TTSTGLVYFPLYALDMHEQGRYMELADPRLEGRVTSQEAEKLVRIALCCVHEEPALRPTM 796
Query: 715 DSVV 718
+VV
Sbjct: 797 AAVV 800
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 270 bits (689), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 223/809 (27%), Positives = 356/809 (44%), Gaps = 133/809 (16%)
Query: 1 KTFSCGFYGLGGNAYLF-SIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDV 59
KTF GF+ G + + F IW+ + D+ VVW ANR P++ Q + +G +VL D
Sbjct: 49 KTFELGFFSPGSSTHRFLGIWYGNIEDKAVVWVANRATPISDQSGVLMISNDGNLVLLDG 108
Query: 60 DDTVIWMTN----TTSTGADRAELLDTGNLVLKDRH-GKILWQSFDYPTDTLLPNQVFRK 114
+ +W +N TT+ + DTGN VL + + +W+SF++PTDT LP R
Sbjct: 109 KNITVWSSNIESSTTNNNNRVVSIHDTGNFVLSETDTDRPIWESFNHPTDTFLPQMRVRV 168
Query: 115 STK------LISGVGNGTYASGYFSLYFD----------NDNVLRLIYDGPEISSVYWPD 158
+ + +S + G +SL D N R G S+++
Sbjct: 169 NPQTGDNHAFVSWRSETDPSPGNYSLGVDPSGAPEIVLWEGNKTRKWRSGQWNSAIFTGI 228
Query: 159 PDFDVFQNGRTKYNSSRIAVLDDFGSFSSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYS 218
P+ + N + S + D+ GS + F+ + + R + Y+G
Sbjct: 229 PNMSLLTNYLYGFKLS--SPPDETGS------VYFTYVPSDPSVLLRFKVLYNGTEEELR 280
Query: 219 LNKVTGSWMISWQALMQPGKVHGVCGKNGIC-VYTPEPKCSCPPGYEATEPGDWSKGCKP 277
N+ W + CGK GIC + CSC GYE G+WS+GC+
Sbjct: 281 WNETLKKWTKFQSEPDSECDQYNRCGKFGICDMKGSNGICSCIHGYEQVSVGNWSRGCRR 340
Query: 278 KFNRTCSSSLT--EVKFVGVPNTDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTG 335
+ C +++ E +F+ + + F++ V E C + CL +C C+ +S L G
Sbjct: 341 RTPLKCERNISVGEDEFLTLKSVKLPDFEIPEHNLVDPEDCRERCLRNCSCNAYS--LVG 398
Query: 336 QGLCFTKSVLFNGFKAPNFPGIIYLKLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSM 395
C +I+ + V ++ E G++ RL+ S++
Sbjct: 399 GIGC-----------------MIWNQDLVDLQQFEAG---GSSLHIRLADSEV------- 431
Query: 396 YDTTAKRVRWSYFYWFALAIGAIEVFVIASGWWLLFRRQDVPSS---------------- 439
+ + A+ +G I + + A W R++DV +
Sbjct: 432 ----GENRKTKIAVIVAVLVGVILIGIFALLLWRFKRKKDVSGAYCGKNTDTSVVVADLT 487
Query: 440 ---------------LEEGYQALSSQFRRFSYAELKKSTKSF--KEELGRGGSGAVYKGV 482
+ EG +S+ FS + +T F + ELGRGG G VYKGV
Sbjct: 488 KSKETTSAFSGSVDIMIEGKAVNTSELPVFSLNAIAIATNDFCKENELGRGGFGPVYKGV 547
Query: 483 LADGRAVAVKRL-GDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541
L DGR +AVKRL G QG + F E+ I K+ H NLVR+ G C EG ++L+YEY+
Sbjct: 548 LEDGREIAVKRLSGKSGQGVDEFKNEIILIAKLQHRNLVRLLGCCFEGEEKMLVYEYMPN 607
Query: 542 QSLDKHLF---SSYFLGWKERFKVALGTAKGLAYLHHD-------------------EFE 579
+SLD LF + WK RF + G A+GL YLH D E
Sbjct: 608 KSLDFFLFDETKQALIDWKLRFSIIEGIARGLLYLHRDSRLRIIHRDLKVSNVLLDAEMN 667
Query: 580 PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
PKI+DFG+A++ N + ++ GT GYM+PE+A + K DVYS+GV++LE+V G
Sbjct: 668 PKISDFGMARIFGGNQNEANTVRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSG 727
Query: 640 IRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGI 699
R ++ + G ++ R EE+VDP+++ + +A I +
Sbjct: 728 KRNTS-LRSSEHGSLIGYAWYLYTHGRS---------EELVDPKIRVTCSKREALRCIHV 777
Query: 700 GISCVDEDRSKRPTMDSVVQSLLECETES 728
+ CV + ++RP M SV+ +LE +T +
Sbjct: 778 AMLCVQDSAAERPNMASVLL-MLESDTAT 805
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O64771|Y1148_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61480 OS=Arabidopsis thaliana GN=At1g61480 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 218/801 (27%), Positives = 363/801 (45%), Gaps = 158/801 (19%)
Query: 2 TFSCGFYGLGG--NAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDV 59
+ GF+ N Y+ IWF R VVW ANR++PV + ++ NG+++L +
Sbjct: 44 VYELGFFSFNNSQNQYV-GIWFKGIIPRVVVWVANREKPVTDSAANLTISSNGSLLLFNE 102
Query: 60 DDTVIW-MTNTTSTGADRAELLDTGNLVLKDRH-GKILWQSFDYPTDTLLP--NQVFRKS 115
+ +V+W + T ++ RAEL D GNLV+ D + G+ LW+SF++ DT+LP N ++ +
Sbjct: 103 NHSVVWSIGETFASNGSRAELTDNGNLVVIDNNSGRTLWESFEHFGDTMLPFSNLMYNLA 162
Query: 116 TK----LISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEI---------SSVYWPDPDFD 162
T L S + + G F++ P++ S YW +
Sbjct: 163 TGEKRVLTSWKSHTDPSPGDFTVQIT-----------PQVPSQACTMRGSKTYWRSGPW- 210
Query: 163 VFQNGRTKYNSSRIAVLDDFGSFSSSDELK--------FSAIDMGFGIKRRLTMDYDGNL 214
+T++ I V+DD +++S L+ F+ + F + + + +G+L
Sbjct: 211 ----AKTRFTG--IPVMDD--TYTSPFSLQQDTNGSGSFTYFERNFKLSY-IMITSEGSL 261
Query: 215 RLYSLNKVTGSWMISWQALMQPGKVHGVCGKNGICVYTPEPKCSC-----PPGYEATEPG 269
+++ N + W ++++A ++G CG GICV + PKC C P E + G
Sbjct: 262 KIFQHNGM--DWELNFEAPENSCDIYGFCGPFGICVMSVPPKCKCFKGFVPKSIEEWKRG 319
Query: 270 DWSKGCKPKFNRTC---SSSLTEVKFVGVPNT---DFYGFDLNYSQTVSKEACMKLCLDD 323
+W+ GC C ++ T F V N DFY F + V E C ++CL +
Sbjct: 320 NWTDGCVRHTELHCQGNTNGKTVNGFYHVANIKPPDFYEF----ASFVDAEGCYQICLHN 375
Query: 324 CRCSGFSYRLTGQGLCFTKSVLFNGFKAPNFPGIIYLKLPVSVEASEPAILNGTNPVCRL 383
C C F+Y + G G L + + I+ ++L S L G
Sbjct: 376 CSCLAFAY-INGIGCLMWNQDLMDAVQFSAGGEILSIRLASSE-------LGGNK----- 422
Query: 384 SKSQIVIGSPSMYDTTAKRVRWSYFYWFALAIGAIEVFVIASGWWLLFRRQDVPSSLEEG 443
+++I++ S I ++ +FVI + F R V ++
Sbjct: 423 -RNKIIVAS----------------------IVSLSLFVILAFAAFCFLRYKVKHTVSAK 459
Query: 444 YQALSSQ--------------FRRFSYAELKKSTKSFK--EELGRGGSGAVYKGVLADGR 487
++S+ + F ++ +T +F +LG+GG G+VYKG L DG+
Sbjct: 460 ISKIASKEAWNNDLEPQDVSGLKFFEMNTIQTATDNFSLSNKLGQGGFGSVYKGKLQDGK 519
Query: 488 AVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDK 546
+AVKRL QG+E F E+ I K+ H NLVR+ G C EG RLL+YE++ +SLD
Sbjct: 520 EIAVKRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILGCCIEGEERLLVYEFLLNKSLDT 579
Query: 547 HLFSS---YFLGWKERFKVALGTAKGLAYLHHD-------------------EFEPKIAD 584
LF S + W +RF + G A+GL YLH D + PKI+D
Sbjct: 580 FLFDSRKRLEIDWPKRFNIIEGIARGLHYLHRDSCLRVIHRDLKVSNILLDEKMNPKISD 639
Query: 585 FGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSN 644
FGLA++ Q ++ GT GYMAPE+A + K D+YS+GV++LE++ G ++S
Sbjct: 640 FGLARMYQGTEYQDNTRRVAGTLGYMAPEYAWTGMFSEKSDIYSFGVILLEIITGEKISR 699
Query: 645 WVVEDGEGQEAELKRFVREVKRKILYEEEAWIE----EIVDPRLKGKFNTNQAATLIGIG 700
+ + R+ K + Y E+W E +++D + + + + IG
Sbjct: 700 F-------------SYGRQGKTLLAYAWESWCESGGIDLLDKDVADSCHPLEVERCVQIG 746
Query: 701 ISCVDEDRSKRPTMDSVVQSL 721
+ CV + RP ++ L
Sbjct: 747 LLCVQHQPADRPNTMELLSML 767
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O64782|SD129_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29 OS=Arabidopsis thaliana GN=SD129 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 263 bits (672), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 231/784 (29%), Positives = 341/784 (43%), Gaps = 132/784 (16%)
Query: 6 GFYGLG-------GNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTD 58
GFY LG N Y+ IWF R VVW ANRD PV + ++ NG+++L D
Sbjct: 40 GFYELGFFSPNNTQNQYV-GIWFKKIVPRVVVWVANRDTPVTSSAANLTISSNGSLILLD 98
Query: 59 VDDTVIWMTNTTSTGAD-RAELLDTGN-LVLKDRHGKILWQSFDYPTDTLLPNQVFRKST 116
VIW T T AELLDTGN +V+ D G LWQSF++ +T+LP T
Sbjct: 99 GKQDVIWSTGKAFTSNKCHAELLDTGNFVVIDDVSGNKLWQSFEHLGNTMLPQSSLMYDT 158
Query: 117 K------LISGVGNGTYASGYFSLYFDNDNVLR-LIYDG--PEISSVYWPDPDFDVFQNG 167
L + N + G FSL + LI G P W F
Sbjct: 159 SNGKKRVLTTWKSNSDPSPGEFSLEITPQIPTQGLIRRGSVPYWRCGPWAKTRFSGISGI 218
Query: 168 RTKYNSSRIAVLDDF---GSFSSSD--ELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKV 222
Y S V D GSFS S S + + K ++ D DGN
Sbjct: 219 DASYVSPFSVVQDTAAGTGSFSYSTLRNYNLSYVTLTPEGKMKILWD-DGN--------- 268
Query: 223 TGSWMISWQALMQPGKVHGVCGKNGICVYTPEPKCSCPPGY-----EATEPGDWSKGCKP 277
+W + P ++G CG G+CV + PKC C G+ E G+W+ GC
Sbjct: 269 --NWKLHLSLPENPCDLYGRCGPYGLCVRSDPPKCECLKGFVPKSDEEWGKGNWTSGCVR 326
Query: 278 KFNRTCSSSLTEVKFVGVPNTDFYGF------DLN-YSQTVSKEACMKLCLDDCRCSGFS 330
+ +C + + +K G FY DL+ ++ ++ E C + CL +C C+ F+
Sbjct: 327 RTKLSCQAK-SSMKTQGKDTDIFYRMTDVKTPDLHQFASFLNAEQCYQGCLGNCSCTAFA 385
Query: 331 YRLTGQGLCFTKSVLFNGFKAPNFPGIIYLKLPVSVEASEPAILNGTNPVCRLSKSQIVI 390
Y ++G G L + + + ++++L S A S+ +I++
Sbjct: 386 Y-ISGIGCLVWNGELADTVQFLSSGEFLFIRLASSELAGS-------------SRRKIIV 431
Query: 391 GSPSMYDTTAKRVRWSYFYWFALAIGAIEVFVIAS----GWWLLFRRQDVPSSLEEGYQA 446
G+ V S F L AI ++ + W F RQDV
Sbjct: 432 GT---------TVSLSIF--LILVFAAIMLWRYRAKQNDAWKNGFERQDV---------- 470
Query: 447 LSSQFRRFSYAELKKSTKSF--KEELGRGGSGAVYKGVLADGRAVAVKRLGDLH-QGEEV 503
S F ++ +T +F +LG+GG G VYKG L DG+ + VKRL QG E
Sbjct: 471 --SGVNFFEMHTIRTATNNFSPSNKLGQGGFGPVYKGKLVDGKEIGVKRLASSSGQGTEE 528
Query: 504 FWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS---SYFLGWKERF 560
F E++ I K+ H NLVR+ G+C +G +LLIYE++ +SLD +F + L W +RF
Sbjct: 529 FMNEITLISKLQHRNLVRLLGYCIDGEEKLLIYEFMVNKSLDIFIFDPCLKFELDWPKRF 588
Query: 561 KVALGTAKGLAYLHH-------------------DEFEPKIADFGLAKLSQRGSNSSQFS 601
+ G A+GL YLH D PKI+DFGLA++ Q
Sbjct: 589 NIIQGIARGLLYLHRDSRLRVIHRDLKVSNILLDDRMNPKISDFGLARMFQGTQYQDNTR 648
Query: 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFV 661
++ GT GYM+PE+A + K D+YS+GV++LE++ G R+S ++ D
Sbjct: 649 RVVGTLGYMSPEYAWAGLFSEKSDIYSFGVLMLEIISGKRISRFIYGD------------ 696
Query: 662 REVKRKILYEEEAWIE----EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSV 717
E K + Y ++W E ++D L + A + IG+ CV + RP V
Sbjct: 697 -ESKGLLAYTWDSWCETGGSNLLDRDLTDTCQAFEVARCVQIGLLCVQHEAVDRPNTLQV 755
Query: 718 VQSL 721
+ L
Sbjct: 756 LSML 759
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O64777|Y1643_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61430 OS=Arabidopsis thaliana GN=At1g61430 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 261 bits (666), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 216/785 (27%), Positives = 340/785 (43%), Gaps = 130/785 (16%)
Query: 2 TFSCGFYGLGG--NAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDV 59
+ GF+ L N YL IWF + VVW ANR++PV + + NG+++L++
Sbjct: 44 VYELGFFSLNNSQNQYL-GIWFKSIIPQVVVWVANREKPVTDSAANLGISSNGSLLLSNG 102
Query: 60 DDTVIWMT-NTTSTGADRAELLDTGNLVLKDR-HGKILWQSFDYPTDTLLPNQVFRKSTK 117
V+W T + ++ RAEL D GNLV D+ G+ LWQSF++ +TLLP + +
Sbjct: 103 KHGVVWSTGDIFASNGSRAELTDHGNLVFIDKVSGRTLWQSFEHLGNTLLPTSIMMYN-- 160
Query: 118 LISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQNGRTKYNSSRIA 177
L++G G A + Y D + P++ P + G T+Y +
Sbjct: 161 LVAGEKRGLTA---WKSYTDPSPGEFVALITPQV-------PSQGIIMRGSTRYYRTGPW 210
Query: 178 VLDDFGSFSSSDELKFSAIDM-------GF------GIKRRLTMDYDGNLRLYSLNKVTG 224
F DE S + G+ G R+ + +G +++ N +
Sbjct: 211 AKTRFTGSPQMDESYTSPFILTQDVNGSGYFSFVERGKPSRMILTSEGTMKVLVHNGM-- 268
Query: 225 SWMISWQALMQPGKVHGVCGKNGICVYTPEPKCSCPPGY-----EATEPGDWSKGCKPKF 279
W +++ ++GVCG G+CV + PKC C G+ + + G+W+ GC +
Sbjct: 269 DWESTYEGPANSCDIYGVCGPFGLCVVSIPPKCKCFKGFVPKFAKEWKKGNWTSGCVRRT 328
Query: 280 NRTC---SSSLTEVKFVGVPNT---DFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRL 333
C SS F VPN DFY Y+ + + E C + CL +C C FSY
Sbjct: 329 ELHCQGNSSGKDANVFYTVPNIKPPDFY----EYANSQNAEECHQNCLHNCSCLAFSY-- 382
Query: 334 TGQGLCFTKSVLFNGFKAPNFPGIIYLKLPVSVEASEPAILNGTNPVCRLSKSQIVIGSP 393
PGI L + + G RL++S++ +
Sbjct: 383 --------------------IPGIGCLMWSKDLMDTRQFSAAGELLSIRLARSELDVNKR 422
Query: 394 SMYDTTAKRVRWSYFYWFALAIGAI-------EVFVIASGWWLLFRRQDVPSSLEEGYQA 446
M A V + F F A + W + QDVP
Sbjct: 423 KM-TIVASTVSLTLFVIFGFAAFGFWRCRVEHNAHISNDAWRNFLQSQDVPGL------- 474
Query: 447 LSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYK---GVLADGRAVAVKRLGDLH-QGEE 502
+F + + + S +LG GG G+VYK G L DGR +AVKRL QG++
Sbjct: 475 ---EFFEMNAIQTATNNFSLSNKLGPGGFGSVYKARNGKLQDGREIAVKRLSSSSGQGKQ 531
Query: 503 VFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS---YFLGWKER 559
F E+ I K+ H NLVR+ G C EG +LLIY +++ +SLD +F + L W +R
Sbjct: 532 EFMNEIVLISKLQHRNLVRVLGCCVEGTEKLLIYGFLKNKSLDTFVFDARKKLELDWPKR 591
Query: 560 FKVALGTAKGLAYLHHD-------------------EFEPKIADFGLAKLSQRGSNSSQF 600
F++ G A+GL YLH D + PKI+DFGLA++ Q +
Sbjct: 592 FEIIEGIARGLLYLHRDSRLRVIHRDLKVSNILLDEKMNPKISDFGLARMFQGTQYQEKT 651
Query: 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRF 660
++ GT GYM+PE+A + K D+YS+GV++LE++ G ++S++ +
Sbjct: 652 RRVVGTLGYMSPEYAWTGVFSEKSDIYSFGVLLLEIISGKKISSF-------------SY 698
Query: 661 VREVKRKILYEEEAWIE----EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDS 716
E K + Y E W E +D L + ++ + IG+ CV + + RP
Sbjct: 699 GEEGKALLAYAWECWCETREVNFLDQALADSSHPSEVGRCVQIGLLCVQHEPADRPNTLE 758
Query: 717 VVQSL 721
++ L
Sbjct: 759 LLSML 763
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 736 | ||||||
| 359482077 | 803 | PREDICTED: putative receptor protein kin | 0.994 | 0.911 | 0.708 | 0.0 | |
| 359482081 | 803 | PREDICTED: putative receptor protein kin | 0.994 | 0.911 | 0.690 | 0.0 | |
| 255577979 | 748 | receptor protein kinase zmpk1, putative | 0.980 | 0.965 | 0.685 | 0.0 | |
| 147791818 | 809 | hypothetical protein VITISV_042870 [Viti | 0.994 | 0.904 | 0.694 | 0.0 | |
| 359482079 | 801 | PREDICTED: LOW QUALITY PROTEIN: putative | 0.987 | 0.907 | 0.698 | 0.0 | |
| 224138878 | 809 | predicted protein [Populus trichocarpa] | 0.995 | 0.906 | 0.689 | 0.0 | |
| 224138874 | 799 | predicted protein [Populus trichocarpa] | 0.987 | 0.909 | 0.696 | 0.0 | |
| 359482073 | 809 | PREDICTED: putative receptor protein kin | 0.994 | 0.904 | 0.684 | 0.0 | |
| 225440502 | 809 | PREDICTED: putative receptor protein kin | 0.995 | 0.906 | 0.668 | 0.0 | |
| 242056279 | 788 | hypothetical protein SORBIDRAFT_03g00486 | 0.966 | 0.902 | 0.519 | 0.0 |
| >gi|359482077|ref|XP_003632708.1| PREDICTED: putative receptor protein kinase ZmPK1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/754 (70%), Positives = 613/754 (81%), Gaps = 22/754 (2%)
Query: 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVD 60
K+F+CGFYG+G NAY FSIWFT+S++RTVVW ANR+RPVNG+GSR SL+R+G M+L D D
Sbjct: 50 KSFTCGFYGMGENAYWFSIWFTNSKERTVVWMANRNRPVNGRGSRISLQRDGTMMLRDAD 109
Query: 61 DTVIWMTNTTSTGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLIS 120
+ +W TNTTST DRAELLDTGNLVLKD GKILWQSFD+PTDTLLPNQ+F STKLIS
Sbjct: 110 GSTVWETNTTSTDVDRAELLDTGNLVLKDPRGKILWQSFDFPTDTLLPNQIFTTSTKLIS 169
Query: 121 GVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQNGRTKYNSSRIAVLD 180
+ G ++SGYF+ FDNDNVLR++YDGPEISS+YWP+PD+DVFQNGRT YNSSRIAVLD
Sbjct: 170 ILRKGDFSSGYFNFLFDNDNVLRMMYDGPEISSLYWPNPDWDVFQNGRTNYNSSRIAVLD 229
Query: 181 DFGSFSSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKVTGSWMISWQALMQPGKVH 240
+ G F SSD + F A DMGFG+KRRLTMDYDGNLRLYSLN TG W ISW+AL Q KVH
Sbjct: 230 EMGRFLSSDRMSFKASDMGFGVKRRLTMDYDGNLRLYSLNHSTGLWNISWEALRQQCKVH 289
Query: 241 GVCGKNGICVYTPEPKCSCPPGYEATEPGDWSKGCKPKFNRTCSSSLTEVKFVGVPNTDF 300
G+CG+NGIC+YTPEPKCSCPPGYE T+P DWSKGCK KFN++CS + +VKFV +P TD+
Sbjct: 290 GLCGRNGICIYTPEPKCSCPPGYEVTDPSDWSKGCKSKFNQSCSQT-QQVKFVELPQTDY 348
Query: 301 YGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKSVLFNGFKAPNFPGIIYL 360
YGFDLNYSQ+VS EAC K+CLDDC C GF YRLTG+G CF KS LFNGFK+ NFPG +YL
Sbjct: 349 YGFDLNYSQSVSMEACRKICLDDCLCQGFVYRLTGEGNCFAKSTLFNGFKSSNFPGSLYL 408
Query: 361 KLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSMYDTTAKRVRWSYFYWFALAIGAIEV 420
KLPV VE S P +LNG++ +C SK V+ S S+YDT +K++RW Y Y FA AIGAIEV
Sbjct: 409 KLPVDVETSAPTVLNGSDLICE-SKEVEVVHSSSVYDTASKKMRWVYLYSFASAIGAIEV 467
Query: 421 FVIASGWWLLFRRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYK 480
I SGWW LFR +VPSS E+GY +SS FRRFSY ELKK+T +FK ELGRGG GAVYK
Sbjct: 468 LFIVSGWWFLFRVHNVPSSAEDGYGPISSPFRRFSYTELKKATNNFKVELGRGGFGAVYK 527
Query: 481 GVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540
GVL D RAVAVK+LGD QGE FWAEVSTIGKIYHMNLVRMWGFCSEGRHRL++YE+VE
Sbjct: 528 GVLEDERAVAVKKLGDATQGEGEFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLVVYEHVE 587
Query: 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-------------------EFEPK 581
SLDKHLFS+ LGWKERF VA+GTA+GLAYLHH+ FEPK
Sbjct: 588 NLSLDKHLFSTSCLGWKERFNVAVGTARGLAYLHHECLEWVIHCDVKPENILLDNGFEPK 647
Query: 582 IADFGLAKLSQRGS-NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI 640
IADFGLAKLSQRG S +FS+IRGTKGYMAPEWA NLPITAKVDVYSYGVV+LEMV+GI
Sbjct: 648 IADFGLAKLSQRGGPGSGEFSRIRGTKGYMAPEWAMNLPITAKVDVYSYGVVVLEMVRGI 707
Query: 641 RLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIG 700
RLS WV EDGE QEAEL RFVR VKRKI Y E+ W+E+ VDPRLKGKF+ QAA L+ IG
Sbjct: 708 RLSKWVGEDGEEQEAELTRFVRAVKRKIQYGEDNWVEDTVDPRLKGKFSRQQAAMLVEIG 767
Query: 701 ISCVDEDRSKRPTMDSVVQSLLECETESEIHITD 734
ISCV+EDRSKRPTM +VVQ LLECE E+++ D
Sbjct: 768 ISCVEEDRSKRPTMATVVQVLLECEDEAQVQTLD 801
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359482081|ref|XP_003632709.1| PREDICTED: putative receptor protein kinase ZmPK1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/754 (69%), Positives = 613/754 (81%), Gaps = 22/754 (2%)
Query: 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVD 60
K+F+CGFYG+G NAY FSIWFT+S++RTVVW ANR+RPVNG+GSR SL+R+G M+L D D
Sbjct: 50 KSFTCGFYGMGENAYWFSIWFTNSKERTVVWMANRNRPVNGRGSRISLQRDGTMMLRDAD 109
Query: 61 DTVIWMTNTTSTGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLIS 120
+ +W TNTTST DRAELLDTGNLVLKD GKILWQSF +PTDTLLPNQ+F STKLIS
Sbjct: 110 GSTVWETNTTSTDVDRAELLDTGNLVLKDPRGKILWQSFGFPTDTLLPNQIFTTSTKLIS 169
Query: 121 GVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQNGRTKYNSSRIAVLD 180
+ G ++SGYF+ FDNDNVLR++YDGPEIS +YWP+PD+DVF NGRT +NSSR AVLD
Sbjct: 170 ILRRGDFSSGYFNFLFDNDNVLRMMYDGPEISRLYWPNPDWDVFGNGRTNFNSSRTAVLD 229
Query: 181 DFGSFSSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKVTGSWMISWQALMQPGKVH 240
+ G F SSD++ F+A DMGFG+KRRLTMDYDGNLRLYSLN TG W+ISW+AL + KVH
Sbjct: 230 EMGRFLSSDKMSFNASDMGFGVKRRLTMDYDGNLRLYSLNHSTGLWVISWKALSEQCKVH 289
Query: 241 GVCGKNGICVYTPEPKCSCPPGYEATEPGDWSKGCKPKFNRTCSSSLTEVKFVGVPNTDF 300
G+CG+NGIC+YTPEPKCSCPPGYE ++P DWSKGCK KFN++CS + +VKF+ +P TD+
Sbjct: 290 GLCGRNGICIYTPEPKCSCPPGYEVSDPSDWSKGCKSKFNQSCSQT-QQVKFLELPQTDY 348
Query: 301 YGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKSVLFNGFKAPNFPGIIYL 360
YGFDLNYSQ+VS EAC K+CLDDC C GF+YRLTG+G C+ KS LFNG+K+ NFPG +YL
Sbjct: 349 YGFDLNYSQSVSMEACRKICLDDCLCQGFAYRLTGEGNCYAKSTLFNGYKSSNFPGSLYL 408
Query: 361 KLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSMYDTTAKRVRWSYFYWFALAIGAIEV 420
KLPV +E S P +LNG++ +C SK V+ S S+YDT +K++RW Y Y FA AIGAIEV
Sbjct: 409 KLPVDIETSAPTVLNGSDLICE-SKEVEVVHSSSVYDTASKKMRWVYLYSFASAIGAIEV 467
Query: 421 FVIASGWWLLFRRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYK 480
I SGWW LF+ +VPSS E+GY ++SS FRRFSY ELKK+T +FK ELGRGG GAVYK
Sbjct: 468 LFIVSGWWFLFKVHNVPSSAEDGYGSISSPFRRFSYTELKKATNNFKVELGRGGFGAVYK 527
Query: 481 GVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540
GVL D RAVAVK+LGD QGE FWAEVSTIGKIYHMNLVRMWGFCSEGRHRL++YE+VE
Sbjct: 528 GVLEDERAVAVKKLGDATQGEGEFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLVVYEHVE 587
Query: 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-------------------EFEPK 581
SLDKHLFS+ LGWKERF VA+GTA+GLAYLHH+ FEPK
Sbjct: 588 NLSLDKHLFSTSCLGWKERFNVAVGTARGLAYLHHECLEWVIHCDVKPENILLDNGFEPK 647
Query: 582 IADFGLAKLSQRGS-NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI 640
IADFGLAKLSQRG S +FS+IRGTKGYMAPEWA NLPITAKVDVYSYGVV+LEMV+GI
Sbjct: 648 IADFGLAKLSQRGGPGSGEFSRIRGTKGYMAPEWAMNLPITAKVDVYSYGVVVLEMVRGI 707
Query: 641 RLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIG 700
RLS WV EDGE QEAEL RFVR VKRKI Y E+ W+E+ VDPRLKGKF+ QA L+ IG
Sbjct: 708 RLSKWVGEDGEEQEAELTRFVRAVKRKIQYGEDNWVEDTVDPRLKGKFSRQQATMLVEIG 767
Query: 701 ISCVDEDRSKRPTMDSVVQSLLECETESEIHITD 734
ISCV+EDRSKRPTM +VVQ LLECE E+++ D
Sbjct: 768 ISCVEEDRSKRPTMATVVQVLLECEGEAQVQTLD 801
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255577979|ref|XP_002529861.1| receptor protein kinase zmpk1, putative [Ricinus communis] gi|223530637|gb|EEF32511.1| receptor protein kinase zmpk1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1092 bits (2823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/743 (68%), Positives = 612/743 (82%), Gaps = 21/743 (2%)
Query: 10 LGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNT 69
+G NAY FSIWFT+S++RTVVWTANRD+PVNGQGSR SL+R+GAMVLTDVD T+IW TNT
Sbjct: 1 MGQNAYWFSIWFTNSKERTVVWTANRDKPVNGQGSRISLQRDGAMVLTDVDGTIIWETNT 60
Query: 70 TSTGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLISGVGNGTYAS 129
T RAELLDTGNLVLK+ GKILWQSFD+PTDTLLPNQ F KSTKL+S +G G Y S
Sbjct: 61 TFVAVSRAELLDTGNLVLKNAKGKILWQSFDFPTDTLLPNQFFTKSTKLVSRLGRGMYGS 120
Query: 130 GYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQNGRTKYNSSRIAVLDDFGSFSSSD 189
GYFSL+F N+NVL L+YDGP+ISS+YWP+PD +VF +GRT YNSSRIAV D+ G F SSD
Sbjct: 121 GYFSLFFYNNNVLTLLYDGPDISSIYWPNPDNNVFASGRTNYNSSRIAVFDEMGYFLSSD 180
Query: 190 ELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKVTGSWMISWQALMQPGKVHGVCGKNGIC 249
+L+FSA D GFGIKRRLTMD DGNLRLYSLN TG W+I+W+A+++ KVHG+CG+NGIC
Sbjct: 181 KLEFSATDAGFGIKRRLTMDDDGNLRLYSLNNKTGLWVIAWKAMLEQCKVHGICGRNGIC 240
Query: 250 VYTPEPKCSCPPGYEATEPGDWSKGCKPKFNRTCSSSLTEVKFVGVPNTDFYGFDLNYSQ 309
+Y PEPKCSCPPGYE E GDWS+GCKPKFN++CS +V FV V DFYGFDLNYSQ
Sbjct: 241 MYAPEPKCSCPPGYEVVEQGDWSQGCKPKFNQSCSQYQQQVNFVEVSQVDFYGFDLNYSQ 300
Query: 310 TVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKSVLFNGFKAPNFPGIIYLKLPVSVEAS 369
++S+++C+K+CLDDCRC+ FSYRL+G+GLCFTKS LFNGF++PNFPG IYLKLP S+
Sbjct: 301 SISRDSCLKICLDDCRCAAFSYRLSGEGLCFTKSALFNGFRSPNFPGSIYLKLPASLANY 360
Query: 370 EPAILNGTNPVCRLSKSQIVIGSPSMYDTTAKRVRWSYFYWFALAIGAIEVFVIASGWWL 429
PAI NGT+ C ++S +++GSPSMY+ ++RV+W+Y YWFA AIG IEV +A+ WW
Sbjct: 361 GPAIANGTDLRCASTESILMLGSPSMYNNASRRVKWAYLYWFAAAIGLIEVVFVAAAWWF 420
Query: 430 LFRRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAV 489
LFRR+ V +EGY AL+SQFR+FSYAELK++T++FKEELGRG SG VYKGVL DGR V
Sbjct: 421 LFRRRGVEDPAKEGYHALTSQFRKFSYAELKRATRNFKEELGRGASGVVYKGVLIDGRVV 480
Query: 490 AVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF 549
A+KRLG+ +QGE+VFWAEVSTIG+I MNLVRMWGFCSE H+LL+YEY+E QSLDKHLF
Sbjct: 481 AMKRLGESYQGEDVFWAEVSTIGRINQMNLVRMWGFCSEKSHKLLVYEYLEYQSLDKHLF 540
Query: 550 S--SYFLGWKERFKVALGTAKGLAYLHHD-------------------EFEPKIADFGLA 588
S FLGWKERF VALGTAKGLAYLHH+ EFEPKI+DFGLA
Sbjct: 541 SPTQNFLGWKERFNVALGTAKGLAYLHHECLEWVIHCDVKPENILLNTEFEPKISDFGLA 600
Query: 589 KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVE 648
KL QRG ++S+FS+IRGTKGYMAPEWA NLPITAKVDVYSYGV+ILEMVKGIRLSNW+ E
Sbjct: 601 KLFQRGGSNSEFSRIRGTKGYMAPEWALNLPITAKVDVYSYGVLILEMVKGIRLSNWITE 660
Query: 649 DGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDR 708
DGE QE+EL+RFVR KR ++ EE+WIEE+VD RL G+F+ QA ++ +GISCV+EDR
Sbjct: 661 DGEEQESELRRFVRVAKRNLVCGEESWIEELVDARLNGQFSRKQAVKIVEVGISCVEEDR 720
Query: 709 SKRPTMDSVVQSLLECETESEIH 731
+ RP+MDSVVQ+LLEC+ ES +H
Sbjct: 721 NVRPSMDSVVQALLECQDESRLH 743
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147791818|emb|CAN61835.1| hypothetical protein VITISV_042870 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/754 (69%), Positives = 607/754 (80%), Gaps = 22/754 (2%)
Query: 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVD 60
K+F+CGFYG+G NAY FSIWFT+S++RTVVWTANR+ PVNG+GSR SL+R+G M+L D D
Sbjct: 56 KSFTCGFYGMGKNAYWFSIWFTNSKERTVVWTANRNTPVNGRGSRISLQRDGTMILRDAD 115
Query: 61 DTVIWMTNTTSTGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLIS 120
+ +W TNTTST DRAELL TGNLVLKD GKILWQSFD+PTDTLLPNQ+ STKLIS
Sbjct: 116 GSTVWETNTTSTDVDRAELLYTGNLVLKDPRGKILWQSFDFPTDTLLPNQILTTSTKLIS 175
Query: 121 GVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQNGRTKYNSSRIAVLD 180
+ G ++SG+F +FDNDNVLR+IYDGP+ISS+YWP+PD+DVFQNGRT YNSSRIAVLD
Sbjct: 176 IIRRGDFSSGHFYFFFDNDNVLRMIYDGPDISSLYWPNPDWDVFQNGRTNYNSSRIAVLD 235
Query: 181 DFGSFSSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKVTGSWMISWQALMQPGKVH 240
+ G F SSD + F A DMGFG+KRRLTMDYDGNLRLYSLN T W ISW+AL Q KVH
Sbjct: 236 EMGRFLSSDRMSFKASDMGFGVKRRLTMDYDGNLRLYSLNHSTRLWNISWEALSQQCKVH 295
Query: 241 GVCGKNGICVYTPEPKCSCPPGYEATEPGDWSKGCKPKFNRTCSSSLTEVKFVGVPNTDF 300
G+CG+NGIC+YTPEPKCSCPPGYE ++P DWSKGCK KFN +CS +VKFV +P TD+
Sbjct: 296 GLCGRNGICIYTPEPKCSCPPGYEVSDPSDWSKGCKSKFNHSCSQP-QQVKFVELPQTDY 354
Query: 301 YGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKSVLFNGFKAPNFPGIIYL 360
YGFDLNYS +VS EAC K+CL+DC C GF+YRLTG+G CF KS LFNG+K+ NFPG +YL
Sbjct: 355 YGFDLNYSPSVSLEACRKICLEDCLCQGFAYRLTGEGNCFAKSTLFNGYKSSNFPGSLYL 414
Query: 361 KLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSMYDTTAKRVRWSYFYWFALAIGAIEV 420
KLPV VE S P +LNG++ +C SK V+ S S+YDT +K++R Y Y FA AIGAIEV
Sbjct: 415 KLPVDVETSAPTVLNGSDLICE-SKEVEVVHSSSVYDTASKQMRGVYLYSFASAIGAIEV 473
Query: 421 FVIASGWWLLFRRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYK 480
+I SGWW LFR +VPSS E+GY +SSQFRRFSY ELKK+T +FK ELGRGG GAVYK
Sbjct: 474 LLIVSGWWFLFRVHNVPSSAEDGYGPISSQFRRFSYTELKKATNNFKVELGRGGFGAVYK 533
Query: 481 GVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540
GVL D RAVAVK+LGD QGE FWAEVSTIGKIYHMNLVRMWGFCSEGRHRL++YE+VE
Sbjct: 534 GVLEDERAVAVKKLGDATQGEGEFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLVVYEHVE 593
Query: 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-------------------EFEPK 581
SLDKHLFS+ LGWKERF VA+GTA+GLAYLHH+ FEPK
Sbjct: 594 NLSLDKHLFSTSCLGWKERFNVAVGTARGLAYLHHECLEWVIHCDVKPENILLDNGFEPK 653
Query: 582 IADFGLAKLSQRGS-NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI 640
IADFGLAKLSQRG S +FS+IRGTKGYMAPEWA NLPITAKVDVYSYGVV+LEMV+GI
Sbjct: 654 IADFGLAKLSQRGGPGSGEFSRIRGTKGYMAPEWAMNLPITAKVDVYSYGVVVLEMVRGI 713
Query: 641 RLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIG 700
RLS WV EDGE QEAEL RFVR VKRKI Y E+ WIE+ VDP LKGKF+ QAA ++ IG
Sbjct: 714 RLSKWVGEDGEEQEAELTRFVRAVKRKIQYGEDNWIEDTVDPXLKGKFSRQQAAMMVKIG 773
Query: 701 ISCVDEDRSKRPTMDSVVQSLLECETESEIHITD 734
ISCV+EDR KRPTM +VVQ LLECE E+++ D
Sbjct: 774 ISCVEEDRIKRPTMATVVQVLLECEDEAQVQTLD 807
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359482079|ref|XP_002272157.2| PREDICTED: LOW QUALITY PROTEIN: putative receptor protein kinase ZmPK1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1085 bits (2805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/749 (69%), Positives = 607/749 (81%), Gaps = 22/749 (2%)
Query: 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVD 60
K+F+CGFYG+G NAY FSIWFT+S++RTVVW ANR+RPVNG+GSR SL+R+G M+L D D
Sbjct: 50 KSFTCGFYGMGENAYWFSIWFTNSKERTVVWMANRNRPVNGRGSRISLQRDGTMMLRDAD 109
Query: 61 DTVIWMTNTTSTGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLIS 120
+ +W TNTTST DRAELLDTGNLVLKD GKILWQSFD+PTDTLLPNQ+F STKLIS
Sbjct: 110 GSTVWETNTTSTDVDRAELLDTGNLVLKDPRGKILWQSFDFPTDTLLPNQIFTTSTKLIS 169
Query: 121 GVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQNGRTKYNSSRIAVLD 180
+ G ++SGYF+ FDNDNVLR++YDGPEISS+YWP+PD+DVFQNGRT YNSSRIAVLD
Sbjct: 170 ILRRGDFSSGYFNFLFDNDNVLRMMYDGPEISSLYWPNPDWDVFQNGRTNYNSSRIAVLD 229
Query: 181 DFGSFSSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKVTGSWMISWQALMQPGKVH 240
+ G F SSD++ F A DMGFG+KRRLTMDYDGNLRLYSLN TG W IS +AL Q KVH
Sbjct: 230 EMGRFLSSDQMSFKASDMGFGVKRRLTMDYDGNLRLYSLNHSTGLWNISXEALRQQCKVH 289
Query: 241 GVCGKNGICVYTPEPKCSCPPGYEATEPGDWSKGCKPKFNRTCSSSLTEVKFVGVPNTDF 300
G+CG+NGIC+YTPEPK SCPPGYE ++P DWSKGCK KFN++CS + +VKFV +P TD+
Sbjct: 290 GLCGRNGICIYTPEPKGSCPPGYEVSDPSDWSKGCKSKFNQSCSQT-QQVKFVELPQTDY 348
Query: 301 YGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKSVLFNGFKAPNFPGIIYL 360
YGFDLNYSQ+VS EAC K+CLDDC C GF+YRLTG+G C+ KS LFNG+K+ NFPG +YL
Sbjct: 349 YGFDLNYSQSVSMEACRKICLDDCLCQGFAYRLTGEGNCYAKSTLFNGYKSSNFPGSLYL 408
Query: 361 KLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSMYDTTAKRVRWSYFYWFALAIGAIEV 420
KLPV VE S P +LNG++ +C SK V+ S S+YDT +K++RW Y Y FA AIGAI V
Sbjct: 409 KLPVDVETSAPTVLNGSDLICE-SKEVEVVHSSSVYDTASKKMRWVYLYSFASAIGAIVV 467
Query: 421 FVIASGWWLLFRRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYK 480
I SGWW LFR +VPSS E+GY +SS FRRFSY ELKK+T +FK ELGRGG GAVYK
Sbjct: 468 LFIVSGWWFLFRVHNVPSSAEDGYGPISSPFRRFSYTELKKATNNFKVELGRGGFGAVYK 527
Query: 481 GVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540
GVL D RAVAVK+LGD QGE FWAEVSTIGKIYHMNLVRMWGFCSEGRHRL++YE+VE
Sbjct: 528 GVLVDERAVAVKKLGDSTQGEGEFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLVVYEHVE 587
Query: 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-------------------EFEPK 581
SLDKHLFS+ LGWKERF VA+GTA+GLAYLHH+ FEPK
Sbjct: 588 NLSLDKHLFSTSCLGWKERFNVAVGTARGLAYLHHECLEWVIHCDVKPENILLDNGFEPK 647
Query: 582 IADFGLAKLSQRGS-NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI 640
IADF LAKLSQRG S +FS+IRGTKGYMAPEWA NLPITAKVDVY YGVV+LEMV+GI
Sbjct: 648 IADFVLAKLSQRGGPGSGEFSRIRGTKGYMAPEWAMNLPITAKVDVYCYGVVVLEMVRGI 707
Query: 641 RLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIG 700
RLS WV EDGE QEAEL RFVR VKRKI Y E+ W+E+ VDPRLKGKF+ QAA L+ IG
Sbjct: 708 RLSKWVGEDGEEQEAELTRFVRVVKRKIQYGEDNWVEDTVDPRLKGKFSRQQAAMLVEIG 767
Query: 701 ISCVDEDRSKRPTMDSVVQSLLECETESE 729
ISCV+EDRSKRPTM +VVQ LLEC+ + +
Sbjct: 768 ISCVEEDRSKRPTMATVVQVLLECDAQVQ 796
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224138878|ref|XP_002322924.1| predicted protein [Populus trichocarpa] gi|222867554|gb|EEF04685.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1078 bits (2789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/757 (68%), Positives = 611/757 (80%), Gaps = 24/757 (3%)
Query: 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVD 60
KTFSCGFYG+G NAY FSIWFT+S+DRTVVW ANRDRP NG+GSR SLRR+GAMVLTDVD
Sbjct: 52 KTFSCGFYGMGQNAYWFSIWFTNSKDRTVVWMANRDRPANGRGSRVSLRRDGAMVLTDVD 111
Query: 61 DTVIWMTNTTSTGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLIS 120
++IW TNTTST RAELLDTGNLVLKD GKILWQSFD+PTDTLLPNQ+F K TKL++
Sbjct: 112 GSIIWETNTTSTDVGRAELLDTGNLVLKDPGGKILWQSFDFPTDTLLPNQLFTKRTKLVA 171
Query: 121 GVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWP--DPDFDVFQNGRTKYNSSRIAV 178
+ +G+YASGYFS +FDNDNVLRLIYDGP+ISS+YWP DP+FDVF+NGRT YNSSR AV
Sbjct: 172 RLHSGSYASGYFSFFFDNDNVLRLIYDGPDISSIYWPNPDPEFDVFRNGRTNYNSSRTAV 231
Query: 179 LDDFGSFSSSDELKFSAIDMGF-GIKRRLTMDYDGNLRLYSLNKVTGSWMISWQALMQPG 237
D+ G F SSD+L+FSA D G IKRRLTMD+DGNLRLYSLN TG W ISWQAL Q
Sbjct: 232 FDEMGHFISSDQLQFSAPDTGLLRIKRRLTMDHDGNLRLYSLNNETGLWAISWQALSQLC 291
Query: 238 KVHGVCGKNGICVYTPEPKCSCPPGYEATEPGDWSKGCKPKFNRTCSSSLTEVKFVGVPN 297
VHG+CG N ICV TP+PKCSCPPGYE TEPG+W+KGCKP FN T S S +VKFV +P+
Sbjct: 292 NVHGICGINSICVNTPDPKCSCPPGYEITEPGNWNKGCKPMFNSTLSQS-QQVKFVLLPH 350
Query: 298 TDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKSVLFNGFKAPNFPGI 357
DF+GFDLN+S + + ++CMKLCL D RC FSYRL G+ CFTK VLFNG+++P+FPG
Sbjct: 351 VDFWGFDLNFSASATFDSCMKLCLGDYRCKSFSYRLYGERRCFTKGVLFNGYQSPSFPGN 410
Query: 358 IYLKLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSMYDTTAKRVRWSYFYWFALAIGA 417
IYL+LPVS E S+ ILNG++ +C+ ++S+ IGSPSMY+ KR RW YFY FA AIG
Sbjct: 411 IYLRLPVSFETSQLGILNGSDLICQSAESETTIGSPSMYNFDTKRTRWVYFYSFASAIGL 470
Query: 418 IEVFVIASGWWLLFRRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGA 477
IE+ + SGWW LFR++ P+ E+GY + S FRRF+Y ELKK+T +FKEELGRGGSGA
Sbjct: 471 IEILFVVSGWWFLFRKRGSPNLAEDGYHLVLSPFRRFTYTELKKATNNFKEELGRGGSGA 530
Query: 478 VYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537
VYKG+L D R VAVKRL +++QGE+VFWAEVSTIGKI HMNL+RMWGFCSEG+HRLL+YE
Sbjct: 531 VYKGILTDERVVAVKRLENMYQGEDVFWAEVSTIGKINHMNLMRMWGFCSEGKHRLLVYE 590
Query: 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-------------------EF 578
Y+E QSLDKHLFS FL WK+RFK ALG AKGLAYLHH+ EF
Sbjct: 591 YMEYQSLDKHLFSPTFLEWKDRFKAALGIAKGLAYLHHECLEWVMHCDVKPGNILLDSEF 650
Query: 579 EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK 638
EPKIADFGLAKLSQRG NSS FSQIRGTKGYMAPEWA+NLPITAKVDVYSYGVV+LE+VK
Sbjct: 651 EPKIADFGLAKLSQRGGNSSDFSQIRGTKGYMAPEWATNLPITAKVDVYSYGVVVLEIVK 710
Query: 639 GIRLSNWVVEDGEGQ-EAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLI 697
GI LSNWV+E E E++L RFVR VKRKI E +WIEEIVDPRL G+F+ NQA T++
Sbjct: 711 GIPLSNWVIEGREEHDESDLTRFVRVVKRKIQCGETSWIEEIVDPRLNGQFSRNQATTIV 770
Query: 698 GIGISCVDEDRSKRPTMDSVVQSLLECETESEIHITD 734
+G+SCV+EDR+KRPTMDSVVQ+LLEC ES + D
Sbjct: 771 ELGMSCVEEDRNKRPTMDSVVQALLECLDESYTQLLD 807
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224138874|ref|XP_002322923.1| predicted protein [Populus trichocarpa] gi|222867553|gb|EEF04684.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1077 bits (2784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/749 (69%), Positives = 606/749 (80%), Gaps = 22/749 (2%)
Query: 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVD 60
KTFSCGFYG+G NAY FSIWFT+S+DRTVVW ANRDRP NG+GSR SLRR+GAMVLTDVD
Sbjct: 52 KTFSCGFYGMGQNAYWFSIWFTNSKDRTVVWMANRDRPANGRGSRVSLRRDGAMVLTDVD 111
Query: 61 DTVIWMTNTTSTGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLIS 120
+IW TNTTST RAELLDTGNLVLKD GKILWQSFD+PTDTLLPNQ+F K TKL++
Sbjct: 112 GFIIWETNTTSTDVGRAELLDTGNLVLKDPGGKILWQSFDFPTDTLLPNQLFTKRTKLVA 171
Query: 121 GVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQNGRTKYNSSRIAVLD 180
+ +G+YASGYFS +FDNDNVLRLIYDGP+ISS+YWP+PDFDVF NGRT YNSSR AV D
Sbjct: 172 RLHSGSYASGYFSFFFDNDNVLRLIYDGPDISSIYWPNPDFDVFGNGRTNYNSSRTAVFD 231
Query: 181 DFGSFSSSDELKFSAIDMGF-GIKRRLTMDYDGNLRLYSLNKVTGSWMISWQALMQPGKV 239
+ G F SSD L+FSA D G IKRRLTMD+DGNLRLYSLN TG W+ISWQAL Q V
Sbjct: 232 EMGHFISSDLLQFSAPDTGLLRIKRRLTMDHDGNLRLYSLNNETGLWVISWQALSQLCNV 291
Query: 240 HGVCGKNGICVYTPEPKCSCPPGYEATEPGDWSKGCKPKFNRTCSSSLTEVKFVGVPNTD 299
HG+CG N ICV TP+PKCSCPPGYE TEPG+W+KGCKP FN T S S +VKFV +P+ D
Sbjct: 292 HGICGINSICVNTPDPKCSCPPGYEITEPGNWNKGCKPMFNSTLSQS-QQVKFVLLPHVD 350
Query: 300 FYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKSVLFNGFKAPNFPGIIY 359
F+GFDLN+S + + ++CMKLCL D RC FSYRL G+ CFTK VLFNG+++P+FPG IY
Sbjct: 351 FWGFDLNFSASATFDSCMKLCLGDYRCKSFSYRLYGERRCFTKGVLFNGYQSPSFPGNIY 410
Query: 360 LKLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSMYDTTAKRVRWSYFYWFALAIGAIE 419
L+LPVS E S+ ILNG++ +C+ ++S+ IGSPSMY+ KR RW YFY FA AIG IE
Sbjct: 411 LRLPVSFETSQLGILNGSDLICQSAESETTIGSPSMYNFDTKRTRWVYFYSFASAIGLIE 470
Query: 420 VFVIASGWWLLFRRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVY 479
+ + SGWW LFR++ P+ E+GY + S FRRF+Y ELKK+T +FKEELGRGGSGAVY
Sbjct: 471 ILFVVSGWWFLFRKRGSPNLAEDGYHLVLSPFRRFTYTELKKATNNFKEELGRGGSGAVY 530
Query: 480 KGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539
KG L D R VAVKRL +++QGE+VFWAEVSTIGKI HMNLVRMWGFCSEG+HRLL+YEY+
Sbjct: 531 KGFLTDERVVAVKRLENMNQGEDVFWAEVSTIGKINHMNLVRMWGFCSEGKHRLLVYEYM 590
Query: 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-------------------EFEP 580
E QSLDKHLFS FL WK+RFK ALG AKGLAYLHH+ EFEP
Sbjct: 591 EYQSLDKHLFSPTFLEWKDRFKAALGIAKGLAYLHHECLEWVIHCDVKPGNILLDSEFEP 650
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI 640
KIADFGLAKLSQRG NSS FSQIRGTKGYMAPEWA+NLPITAKVDVYSYGVV+LE+VKGI
Sbjct: 651 KIADFGLAKLSQRGGNSSDFSQIRGTKGYMAPEWATNLPITAKVDVYSYGVVVLEIVKGI 710
Query: 641 RLSNWVVEDGEGQ-EAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGI 699
LSNWV+E E E++L RFVR VKRKI E +WIEEIVDPRL G+F+ NQA T++ +
Sbjct: 711 PLSNWVIEGREEHDESDLTRFVRVVKRKIQCGETSWIEEIVDPRLNGQFSRNQATTIVEL 770
Query: 700 GISCVDEDRSKRPTMDSVVQSLLECETES 728
G+SCV+EDR+KRPTMDSVVQ+LLEC ES
Sbjct: 771 GMSCVEEDRNKRPTMDSVVQALLECLDES 799
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359482073|ref|XP_002272276.2| PREDICTED: putative receptor protein kinase ZmPK1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/754 (68%), Positives = 603/754 (79%), Gaps = 22/754 (2%)
Query: 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVD 60
K+F+CGFYG+G NAY FSIWFT+S+++TVVWTANR+ PVNG+GSR L+R+G M+L D
Sbjct: 56 KSFTCGFYGMGKNAYWFSIWFTNSKEKTVVWTANRNTPVNGRGSRIWLQRDGTMILRAAD 115
Query: 61 DTVIWMTNTTSTGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLIS 120
+ +W TNTTST DRAELLDTGNLVLKD GK+LWQSFD+PTDTLLPNQ+ STKLIS
Sbjct: 116 GSTVWETNTTSTDVDRAELLDTGNLVLKDPRGKVLWQSFDFPTDTLLPNQILTTSTKLIS 175
Query: 121 GVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQNGRTKYNSSRIAVLD 180
+ ++SG+F +F NDNVLR+IYDGP+ISS+YWP+PD+DVFQN RT YNSSRIAVLD
Sbjct: 176 IIRREDFSSGHFYFFFYNDNVLRMIYDGPDISSLYWPNPDWDVFQNRRTNYNSSRIAVLD 235
Query: 181 DFGSFSSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKVTGSWMISWQALMQPGKVH 240
+ G F SSD + F A DMGFG+KRRLTMDYDGNLRLYSLN +G W ISW+AL Q KVH
Sbjct: 236 EMGRFLSSDRMSFKASDMGFGVKRRLTMDYDGNLRLYSLNHSSGLWNISWEALSQQCKVH 295
Query: 241 GVCGKNGICVYTPEPKCSCPPGYEATEPGDWSKGCKPKFNRTCSSSLTEVKFVGVPNTDF 300
G+CG+NGIC+YTPEPKCSCPPGYE ++P DWSKGCK KFN +CS +VKFV +P TD+
Sbjct: 296 GLCGRNGICIYTPEPKCSCPPGYEVSDPSDWSKGCKSKFNHSCSQP-QQVKFVELPQTDY 354
Query: 301 YGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKSVLFNGFKAPNFPGIIYL 360
YGFDL+YS +VS EAC K+CL+DC C GF+YRLTG+G CF KS LFNG+K+ NFPG +YL
Sbjct: 355 YGFDLDYSPSVSLEACRKICLEDCLCQGFAYRLTGEGNCFAKSTLFNGYKSSNFPGSLYL 414
Query: 361 KLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSMYDTTAKRVRWSYFYWFALAIGAIEV 420
KLPV V+ S P +LNG++ +C SK V+ S S+YDT +K++RW Y Y FA AIGAIEV
Sbjct: 415 KLPVDVQTSAPTVLNGSDLICE-SKEVEVVHSSSVYDTASKQMRWVYLYSFASAIGAIEV 473
Query: 421 FVIASGWWLLFRRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYK 480
+I SGWW LFR +VPSS E GY +SSQFRRFSY ELKK+T +FK ELGRGG GAVYK
Sbjct: 474 LLIVSGWWFLFRVHNVPSSAENGYGPISSQFRRFSYTELKKATNNFKVELGRGGFGAVYK 533
Query: 481 GVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540
GVL D RAVAVK+LGD QGE FWAEVSTIGKIYHMNLVRMWGFCSEGRHRL++YE+VE
Sbjct: 534 GVLEDERAVAVKKLGDATQGEGEFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLVVYEHVE 593
Query: 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-------------------EFEPK 581
SLDKHLFS+ LGWKERF VA+GTA+GLAYLHH+ FEPK
Sbjct: 594 NLSLDKHLFSTSCLGWKERFNVAVGTARGLAYLHHECLEWVIHCDVKPENILLDNGFEPK 653
Query: 582 IADFGLAKLSQRGS-NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI 640
IADFGLAKLSQRG S +FS+IRGTKGYMAPEWA NLPITAKVDVYSYGVV+LEMV+GI
Sbjct: 654 IADFGLAKLSQRGGPGSGEFSRIRGTKGYMAPEWAMNLPITAKVDVYSYGVVVLEMVRGI 713
Query: 641 RLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIG 700
RL WV EDGE QEAEL RFVR VKRKI Y E+ WIE+ VDPRLK KF+ QAA ++ IG
Sbjct: 714 RLLKWVGEDGEEQEAELTRFVRAVKRKIQYGEDNWIEDTVDPRLKEKFSRQQAAMMVKIG 773
Query: 701 ISCVDEDRSKRPTMDSVVQSLLECETESEIHITD 734
ISCV+EDR KRPTM +VVQ LLECE E+++ D
Sbjct: 774 ISCVEEDRIKRPTMATVVQVLLECEDEAQVQTLD 807
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225440502|ref|XP_002272467.1| PREDICTED: putative receptor protein kinase ZmPK1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1056 bits (2731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/754 (66%), Positives = 595/754 (78%), Gaps = 21/754 (2%)
Query: 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVD 60
++F+CGFYG G NAY FSIWFT+S++RTVVW ANRDRPVNG+GSR SLRR+G M L D D
Sbjct: 55 RSFTCGFYGAGENAYWFSIWFTNSKERTVVWMANRDRPVNGRGSRISLRRDGIMNLRDAD 114
Query: 61 DTVIWMTNTTSTGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLIS 120
+ +W TNTTST DRAELLDTGNLVLK+ HGKILWQSFD+PTDTLLPNQ+ + TKLIS
Sbjct: 115 GSTVWETNTTSTDVDRAELLDTGNLVLKNPHGKILWQSFDFPTDTLLPNQILTRRTKLIS 174
Query: 121 GVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQNGRTKYNSSRIAVLD 180
+ G ++SGY+ LYFDNDN+LR++YDGP ISS+YWP+PD + N R NSSRIAVLD
Sbjct: 175 IIRGGDFSSGYYILYFDNDNILRMMYDGPSISSLYWPNPDLGILPNKRRNSNSSRIAVLD 234
Query: 181 DFGSFSSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKVTGSWMISWQALMQPGKVH 240
+ G F SSD F A DMG G+KRRLT+ YDGNLRLYSLN TG WMISW A + +VH
Sbjct: 235 EMGRFLSSDNASFRASDMGLGVKRRLTIGYDGNLRLYSLNHSTGLWMISWMAFGERNRVH 294
Query: 241 GVCGKNGICVYTPEPKCSCPPGYEATEPGDWSKGCKPKFNRTCSSSLTEVKFVGVPNTDF 300
G+CG+NGICVYTPEPKCSCPPGYE ++P DWSKGCK KF+R+CS +VKFV +P+TDF
Sbjct: 295 GLCGRNGICVYTPEPKCSCPPGYEVSDPSDWSKGCKSKFHRSCSRP-QQVKFVELPHTDF 353
Query: 301 YGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKSVLFNGFKAPNFPGIIYL 360
YG D+N+ +VS E C K CL+DC C F+YRLTG GLCF K LFNGF++PNFPG IYL
Sbjct: 354 YGSDVNHLTSVSLETCRKTCLEDCLCEAFAYRLTGNGLCFNKIALFNGFRSPNFPGTIYL 413
Query: 361 KLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSMYDTTAKRVRWSYFYWFALAIGAIEV 420
KLPV VE S ++N +NP+C + +IV+ SPSMYDT K +RW Y Y FA A+GA+EV
Sbjct: 414 KLPVDVETSASTLVNVSNPICESKEVEIVLSSPSMYDTANKGMRWVYLYSFASALGALEV 473
Query: 421 FVIASGWWLLFRRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYK 480
I SGWW LFR V S +E+GY +SSQFR+FSY ELKK+T +FK ELGRGG GAVYK
Sbjct: 474 LFIVSGWWFLFRVPKVTSPVEDGYGPISSQFRKFSYTELKKATNNFKVELGRGGFGAVYK 533
Query: 481 GVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540
G+L D R VAVK+L D+ QGE FWAE+STI KIYHMNLVRMWGFCSEGRHRLL+YE+VE
Sbjct: 534 GILEDERVVAVKKLRDVIQGEGEFWAEISTIRKIYHMNLVRMWGFCSEGRHRLLVYEHVE 593
Query: 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-------------------EFEPK 581
SLDKHLFS+ FLGWKERF VA+GTA+GLAYLHH+ FEPK
Sbjct: 594 NLSLDKHLFSTTFLGWKERFNVAVGTARGLAYLHHECLEWVIHCDVKPENILLDNGFEPK 653
Query: 582 IADFGLAKLSQRGS-NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI 640
IADFGLAKLSQRG S +FS+IRGTKGYMAPEWA NLPITAKVDVYS+GVV+LEMV+GI
Sbjct: 654 IADFGLAKLSQRGGPGSREFSRIRGTKGYMAPEWAMNLPITAKVDVYSFGVVVLEMVRGI 713
Query: 641 RLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIG 700
RLSNWV+EDG+ QEAEL RFV+ VK KI EE+ WI++ VD RLKG+F+ +QAATLI IG
Sbjct: 714 RLSNWVMEDGKEQEAELTRFVKLVKEKIQCEEDNWIDDTVDRRLKGRFSRHQAATLIEIG 773
Query: 701 ISCVDEDRSKRPTMDSVVQSLLECETESEIHITD 734
ISCV+EDRSKRPTM +VVQ LLECE E+++ I +
Sbjct: 774 ISCVEEDRSKRPTMATVVQVLLECEDEAQVQIQE 807
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|242056279|ref|XP_002457285.1| hypothetical protein SORBIDRAFT_03g004860 [Sorghum bicolor] gi|241929260|gb|EES02405.1| hypothetical protein SORBIDRAFT_03g004860 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/757 (51%), Positives = 530/757 (70%), Gaps = 46/757 (6%)
Query: 3 FSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDT 62
FSCGFY +GGNA+ FSIWFT++ ++TVVWTAN PVNG GS SL G +VLT V+ T
Sbjct: 50 FSCGFYEVGGNAFSFSIWFTNTMEKTVVWTANPKSPVNGHGSMVSLNHGGNLVLTGVNGT 109
Query: 63 VIWMTNTTSTGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLISGV 122
V W + T+S LLDTGNL+++D +G +LW+SF PTDTLLP Q K+T+L+SG
Sbjct: 110 VTWDSKTSSGKGTTVALLDTGNLIIRDSNGAVLWESFSSPTDTLLPFQALTKATRLVSG- 168
Query: 123 GNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQNGRTKYNSSRIAVLDDF 182
Y+SLYFDNDNVLRL+YDGP+ISS+YWP D+ VFQNGRT YNS+R+AVLD
Sbjct: 169 --------YYSLYFDNDNVLRLMYDGPDISSIYWPSADYSVFQNGRTNYNSTRVAVLDAE 220
Query: 183 GSFSSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKVTGSWMISWQALMQPGKVHGV 242
G F SSD L + D G IKRRLT+DYDGNLR+YSLN G W+ISW+A+ + VHG+
Sbjct: 221 GYFLSSDGLNIKSSDWGTVIKRRLTVDYDGNLRMYSLNASDGKWIISWEAIAKMCDVHGL 280
Query: 243 CGKNGICVYTPEPKCSCPPGYEATEPGDWSKGCKPKFNRTCSSSLTEVKFVGVPNTDFYG 302
CG+NGIC +P CSCPPG+E +P W+KGC+P+F+++C++ + E +F+ +P TDFYG
Sbjct: 281 CGQNGICQSSPRFHCSCPPGHEMIDPHIWNKGCRPQFSKSCNN-IEEFQFIKLPRTDFYG 339
Query: 303 FDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKSVLFNGFKAPNFPGIIYLKL 362
FD ++Q+VS E C K+CLD C CS F+Y+ G GLC+TK+VLFNG+ P+FPG Y+KL
Sbjct: 340 FDQTFNQSVSLEECSKICLDACSCSAFTYK-KGPGLCYTKAVLFNGYSDPSFPGDNYIKL 398
Query: 363 PVSVEASEPAILNGTNPVCRLSKSQIVIGSPSMYDTTAKRVRWSYFYWFALAIGAIEVFV 422
P + S + ++ C + +IV GS SMY ++ +W+ +Y FA +GA+ +
Sbjct: 399 PKDLGISTSLVSRKSHLTCNRNIPEIVEGSASMYGMSSVDKKWTTYYVFAAILGALVLLF 458
Query: 423 IASGWWLLFRRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGV 482
+ WW L +Q++P S+E GY+ ++SQFR F++ EL+++T FKEE+GRGGSG VY+GV
Sbjct: 459 TGTSWWFLSSKQNIPKSMEAGYRMVTSQFRMFTHQELREATGKFKEEIGRGGSGIVYRGV 518
Query: 483 LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542
L D R VAVK+L + EE WAE+S IG+I HMNLVRMWGFCSE +H+LL+YEYVE +
Sbjct: 519 LEDKRVVAVKKLTNFSHSEEELWAEMSIIGRINHMNLVRMWGFCSERQHKLLVYEYVENE 578
Query: 543 SLDKHLF----SSYFLGWKERFKVALGTAKGLAYLHHD-------------------EFE 579
SLD++LF S + W +RFK+ALGTA+GLAYLHH+ +FE
Sbjct: 579 SLDRYLFGNVSSERLIAWSQRFKIALGTARGLAYLHHECLEWVIHCDVKPENILLTRDFE 638
Query: 580 PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KIADFGLAKLS+RGS+S + +RGT GYMAPEWA NLPI AKVDVYSYGVV+LE++ G
Sbjct: 639 AKIADFGLAKLSKRGSSSFNLTHMRGTMGYMAPEWALNLPINAKVDVYSYGVVLLEILTG 698
Query: 640 IRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGI 699
R+S+ + D G E EL++FV+ +K+ + E +++IVD RL+G FN QA ++ +
Sbjct: 699 TRISSGITVD--GMEIELRQFVQGLKQ---FLESGDVKDIVDHRLQGHFNPEQAKVMLQV 753
Query: 700 GISCVDEDRSKRPTMDSVVQSLLECETESEIHITDDH 736
GI+C+ E+R+ RPTM+ ++ LL C + DDH
Sbjct: 754 GIACL-EERNSRPTMNDIIIELLACADQ------DDH 783
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 736 | ||||||
| TAIR|locus:2059103 | 828 | AT2G19130 [Arabidopsis thalian | 0.482 | 0.428 | 0.292 | 8.4e-86 | |
| TAIR|locus:2026155 | 829 | AT1G34300 [Arabidopsis thalian | 0.573 | 0.509 | 0.341 | 9.7e-74 | |
| TAIR|locus:2116525 | 821 | SD2-5 "S-domain-2 5" [Arabidop | 0.225 | 0.202 | 0.45 | 6.5e-70 | |
| TAIR|locus:2182603 | 872 | AT5G35370 [Arabidopsis thalian | 0.460 | 0.388 | 0.307 | 1.6e-67 | |
| TAIR|locus:2197709 | 809 | AT1G61480 [Arabidopsis thalian | 0.898 | 0.817 | 0.294 | 5.1e-67 | |
| TAIR|locus:2197729 | 805 | SD1-29 "S-domain-1 29" [Arabid | 0.908 | 0.831 | 0.293 | 3.2e-65 | |
| TAIR|locus:2141176 | 849 | B120 [Arabidopsis thaliana (ta | 0.437 | 0.379 | 0.267 | 3.4e-65 | |
| TAIR|locus:2200923 | 802 | AT1G61550 [Arabidopsis thalian | 0.925 | 0.849 | 0.292 | 2.9e-64 | |
| TAIR|locus:2018546 | 843 | RK1 "receptor kinase 1" [Arabi | 0.447 | 0.390 | 0.279 | 5.2e-63 | |
| TAIR|locus:2197734 | 814 | AT1G61370 [Arabidopsis thalian | 0.426 | 0.385 | 0.283 | 3.8e-62 |
| TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 375 (137.1 bits), Expect = 8.4e-86, Sum P(3) = 8.4e-86
Identities = 114/390 (29%), Positives = 173/390 (44%)
Query: 2 TFSCGFY--GLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDV 59
T+ GF+ G N Y+ +W+ +T++W ANRD+ V+ + S NG ++L D
Sbjct: 44 TYEMGFFKPGSSSNFYI-GMWYKQL-SQTILWVANRDKAVSDKNSSVFKISNGNLILLDG 101
Query: 60 D-DTVIWMT---NTTSTGADRAELLDTGNLVLK----DRHGKILWQSFDYPTDTLLPNQV 111
+ T +W T +T+S A A L D GNLVL+ +LWQSFD+P DT LP
Sbjct: 102 NYQTPVWSTGLNSTSSVSALEAVLQDDGNLVLRTGGSSLSANVLWQSFDHPGDTWLPGVK 161
Query: 112 FR------KSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQ 165
R KS +L S + G FSL D +++++G S+ YW ++
Sbjct: 162 IRLDKRTGKSQRLTSWKSLEDPSPGLFSLELDESTAYKILWNG---SNEYWSSGPWNPQS 218
Query: 166 NGRTKYNSSRIAVLDDFGSFSSSDELKFS-AIDMGFGIKRRLTMDYDGNLRLYSLNKVTG 224
R+ + +F FS++ + F+ +I + R MD G ++ ++ +
Sbjct: 219 RIFDSVPEMRLNYIYNFSFFSNTTDSYFTYSIYNQLNVSR-FVMDVSGQIKQFTWLEGNK 277
Query: 225 SWMISWQALMQPGKVHGVCGKNGICVYTPEPKCSCPPGYEATEPGDW-----SKGCKPKF 279
+W + W Q +V+ CG GIC EP C CP G+ DW S GC K
Sbjct: 278 AWNLFWSQPRQQCQVYRYCGSFGICSDKSEPFCRCPQGFRPMSQKDWDLKDYSAGCVRKT 337
Query: 280 NRTCSSSLTEVKFVGVPNTDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQGLC 339
CS +F +PN ++T S C C DC C ++Y G C
Sbjct: 338 ELQCSRGDIN-QFFRLPNMKLADNSEVLTRT-SLSICASACQGDCSCKAYAYD-EGSSKC 394
Query: 340 --FTKSVL-FNGFKAPNFPG-IIYLKLPVS 365
++K VL + N G I YL+L S
Sbjct: 395 LVWSKDVLNLQQLEDENSEGNIFYLRLAAS 424
|
|
| TAIR|locus:2026155 AT1G34300 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 539 (194.8 bits), Expect = 9.7e-74, Sum P(2) = 9.7e-74
Identities = 159/466 (34%), Positives = 223/466 (47%)
Query: 129 SGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQNGRT--KYNSSRIAVLDDFGS-F 185
SG +S + L L ++ S++YW F + + + + V+ F S
Sbjct: 160 SGLYSFQLERSGNLTLRWN---TSAIYWNHGLNSSFSSNLSSPRLSLQTNGVVSIFESNL 216
Query: 186 SSSDELKFSAIDMG-FGIKRRLTMDYDGNLRLYS-LNKVTGSWMISWQALMQPGKVHGVC 243
E+ +S D G R L +D DGNLR+YS ++ +G W A+ Q V+G C
Sbjct: 217 LGGAEIVYSG-DYGDSNTFRFLKLDDDGNLRIYSSASRNSGPVNAHWSAVDQC-LVYGYC 274
Query: 244 GKNGICVYTP-EPKCSCPP-GYEATEPGDWSKGCKPKFNRT-CSSSLTEVKFVGVPNTDF 300
G GIC Y P CSCP ++ + D KGCK K + CS + T + V
Sbjct: 275 GNFGICSYNDTNPICSCPSRNFDFVDVNDRRKGCKRKVELSDCSGNTTMLDLVHT-RLFT 333
Query: 301 YGFDLNY-SQTVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTK--SVLFNGFKAPNFPGI 357
Y D N S C CL C G G C+ K F G++ P+ P
Sbjct: 334 YEDDPNSESFFAGSSPCRANCLSSVLCLASVSMSDGSGNCWQKHPGSFFTGYQWPSVPST 393
Query: 358 IYLKLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSMYDTTAKRVRWSYFYWFALAIGA 417
Y+K+ P + N R +K D +K W A+ G
Sbjct: 394 SYVKV------CGPVVANTLE---RATKGD---------DNNSKVHLW--IVAVAVIAGL 433
Query: 418 IEVFVIASG-WWLLFRRQDVPSSLEEGYQAL---SSQFRRFSYAELKKSTKSFKEELGRG 473
+ + + G WW R+ +L Y L S +F+Y EL++ TKSFKE+LG G
Sbjct: 434 LGLVAVEIGLWWCCCRKNPRFGTLSSHYTLLEYASGAPVQFTYKELQRCTKSFKEKLGAG 493
Query: 474 GSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533
G G VY+GVL + VAVK+L + QGE+ F EV+TI +H+NLVR+ GFCS+GRHRL
Sbjct: 494 GFGTVYRGVLTNRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSQGRHRL 553
Query: 534 LIYEYVEKQSLDKHLF---SSYFLGWKERFKVALGTAKGLAYLHHD 576
L+YE++ SLD LF S+ FL W+ RF +ALGTAKG+ YLH +
Sbjct: 554 LVYEFMRNGSLDNFLFTTDSAKFLTWEYRFNIALGTAKGITYLHEE 599
|
|
| TAIR|locus:2116525 SD2-5 "S-domain-2 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 361 (132.1 bits), Expect = 6.5e-70, Sum P(3) = 6.5e-70
Identities = 81/180 (45%), Positives = 117/180 (65%)
Query: 411 FALAIGAIEVFVIASGWWLLFR---RQ----DVP--SSLEEGY-QALSSQFRRFSYAELK 460
+ + I + VF+IA ++ FR R+ + P SS E+ + + LS RF+Y +L+
Sbjct: 430 YVVIIVVVTVFIIAVLIFVAFRIHKRKKMILEAPQESSEEDNFLENLSGMPIRFAYKDLQ 489
Query: 461 KSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLV 520
+T +F +LG+GG G+VY+G L DG +AVK+L + QG++ F AEVS IG I+H++LV
Sbjct: 490 SATNNFSVKLGQGGFGSVYEGTLPDGSRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLV 549
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLF----SSYFLGWKERFKVALGTAKGLAYLHHD 576
R+ GFC+EG HRLL YE++ K SL++ +F L W RF +ALGTAKGLAYLH D
Sbjct: 550 RLRGFCAEGAHRLLAYEFLSKGSLERWIFRKKDGDVLLDWDTRFNIALGTAKGLAYLHED 609
|
|
| TAIR|locus:2182603 AT5G35370 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 352 (129.0 bits), Expect = 1.6e-67, Sum P(3) = 1.6e-67
Identities = 122/397 (30%), Positives = 186/397 (46%)
Query: 208 MDYDGNLRLYSLNKVTGSWMIS-WQALMQPGKVHGVCGKNGICVY---TPEPKCSCPPGY 263
MD G + +++ +G +++ + M ++ VCGK G+C + CSCP
Sbjct: 260 MDSSGK---FIVSRFSGKNLVTEFSGPMDSCQIPFVCGKLGLCNLDNASENQSCSCPDEM 316
Query: 264 EATEPGDWSKG-CKP---KFNRTCSSSLTEVKFVGVPNTDFYGFDLNYSQTVSKE----A 315
D KG C P + S + ++ + Y F +++ V A
Sbjct: 317 RM----DAGKGVCVPVSQSLSLPVSCEARNISYLELGLGVSY-FSTHFTDPVEHGLPLLA 371
Query: 316 CMKLCLDDCRCSGFSYRLTGQGLCFTKSVLFNGFK-APNFPG----IIYLKLPV-SVEAS 369
C +C +C C G Y T + C+ F N P I Y+KL + A
Sbjct: 372 CHDICSKNCSCLGVFYENTSRS-CYLVKDSFGSLSLVKNSPENHDLIGYVKLSIRKTNAQ 430
Query: 370 EPAILN--GTN-PVCRLSKSQIVIGSPSMYDTTAKRVRWSYFYWFALAIGAIEVFVIASG 426
P N G++ PV L +++ + A + W W A V +S
Sbjct: 431 PPGNNNRGGSSFPVIAL----VLLPCSGFFLLIALGLLW----WRRCA-----VMRYSS- 476
Query: 427 WWLLFRRQDV--PSSLEEGYQA---LSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKG 481
R + V P S E G + ++F + EL+++T++FK ++G GG G+VYKG
Sbjct: 477 ----IREKQVTRPGSFESGDLGSFHIPGLPQKFEFEELEQATENFKMQIGSGGFGSVYKG 532
Query: 482 VLADGRAVAVKRLGD--LHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539
L D +AVK++ + LH G + F E++ IG I H NLV++ GFC+ GR LL+YEY+
Sbjct: 533 TLPDETLIAVKKITNHGLH-GRQEFCTEIAIIGNIRHTNLVKLRGFCARGRQLLLVYEYM 591
Query: 540 EKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLH 574
SL+K LFS L W+ERF +ALGTA+GLAYLH
Sbjct: 592 NHGSLEKTLFSGNGPVLEWQERFDIALGTARGLAYLH 628
|
|
| TAIR|locus:2197709 AT1G61480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 227/770 (29%), Positives = 362/770 (47%)
Query: 3 FSCGFYGLGG--NAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVD 60
+ GF+ N Y+ IWF R VVW ANR++PV + ++ NG+++L + +
Sbjct: 45 YELGFFSFNNSQNQYV-GIWFKGIIPRVVVWVANREKPVTDSAANLTISSNGSLLLFNEN 103
Query: 61 DTVIWMTNTT-STGADRAELLDTGNLVLKDRH-GKILWQSFDYPTDTLLP--NQVFRKST 116
+V+W T ++ RAEL D GNLV+ D + G+ LW+SF++ DT+LP N ++ +T
Sbjct: 104 HSVVWSIGETFASNGSRAELTDNGNLVVIDNNSGRTLWESFEHFGDTMLPFSNLMYNLAT 163
Query: 117 ---KLISGVGNGTYAS-GYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQNGRTKYN 172
++++ + T S G F++ + S YW + +T++
Sbjct: 164 GEKRVLTSWKSHTDPSPGDFTVQITPQVPSQACT--MRGSKTYWRSGPW-----AKTRFT 216
Query: 173 SSRIAVLDD-FGS-FSSSDELK----FSAIDMGFGIKRRLTMDYDGNLRLYSLNKVTGSW 226
I V+DD + S FS + F+ + F + + + +G+L+++ N + W
Sbjct: 217 G--IPVMDDTYTSPFSLQQDTNGSGSFTYFERNFKLSY-IMITSEGSLKIFQHNGM--DW 271
Query: 227 MISWQALMQPGKVHGVCGKNGICVYTPEPKCSC-----PPGYEATEPGDWSKGCKPKFNR 281
++++A ++G CG GICV + PKC C P E + G+W+ GC
Sbjct: 272 ELNFEAPENSCDIYGFCGPFGICVMSVPPKCKCFKGFVPKSIEEWKRGNWTDGCVRHTEL 331
Query: 282 TCSSSL---TEVKFVGVPNT---DFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTG 335
C + T F V N DFY F + V E C ++CL +C C F+Y + G
Sbjct: 332 HCQGNTNGKTVNGFYHVANIKPPDFYEF----ASFVDAEGCYQICLHNCSCLAFAY-ING 386
Query: 336 QGLCFTKSVLFNGFKAPNFPGIIYLKLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSM 395
G L + + + G I L + + +SE L G N ++ + IV S S+
Sbjct: 387 IGCLMWNQDLMDAVQF-SAGGEI---LSIRLASSE---LGG-NKRNKIIVASIV--SLSL 436
Query: 396 YDTTAKRVRWSYFYWFALAIGAIEVFVIAS--GWWLLFRRQDVPSSLEEGYQALSSQFRR 453
+ A Y + A ++ IAS W QDV S L+ F
Sbjct: 437 FVILAFAAFCFLRYKVKHTVSA-KISKIASKEAWNNDLEPQDV-SGLK---------FFE 485
Query: 454 FSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH-QGEEVFWAEVSTIG 512
+ + S +LG+GG G+VYKG L DG+ +AVKRL QG+E F E+ I
Sbjct: 486 MNTIQTATDNFSLSNKLGQGGFGSVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIVLIS 545
Query: 513 KIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS---YFLGWKERFKVALGTAKG 569
K+ H NLVR+ G C EG RLL+YE++ +SLD LF S + W +RF + G A+G
Sbjct: 546 KLQHKNLVRILGCCIEGEERLLVYEFLLNKSLDTFLFDSRKRLEIDWPKRFNIIEGIARG 605
Query: 570 LAYLHHD-------------------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYM 610
L YLH D + PKI+DFGLA++ Q ++ GT GYM
Sbjct: 606 LHYLHRDSCLRVIHRDLKVSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVAGTLGYM 665
Query: 611 APEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILY 670
APE+A + K D+YS+GV++LE++ G ++S + + R+ K + Y
Sbjct: 666 APEYAWTGMFSEKSDIYSFGVILLEIITGEKISRF-------------SYGRQGKTLLAY 712
Query: 671 EEEAWIE----EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-TMD 715
E+W E +++D + + + + IG+ CV + RP TM+
Sbjct: 713 AWESWCESGGIDLLDKDVADSCHPLEVERCVQIGLLCVQHQPADRPNTME 762
|
|
| TAIR|locus:2197729 SD1-29 "S-domain-1 29" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 228/778 (29%), Positives = 349/778 (44%)
Query: 6 GFYGLG-------GNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTD 58
GFY LG N Y+ IWF R VVW ANRD PV + ++ NG+++L D
Sbjct: 40 GFYELGFFSPNNTQNQYV-GIWFKKIVPRVVVWVANRDTPVTSSAANLTISSNGSLILLD 98
Query: 59 VDDTVIWMTNTTSTGAD-RAELLDTGN-LVLKDRHGKILWQSFDYPTDTLLPNQVFRKST 116
VIW T T AELLDTGN +V+ D G LWQSF++ +T+LP T
Sbjct: 99 GKQDVIWSTGKAFTSNKCHAELLDTGNFVVIDDVSGNKLWQSFEHLGNTMLPQSSLMYDT 158
Query: 117 K------LISGVGNGTYASGYFSLYFDNDNVLR-LIYDG--PEISSVYWPDPDFDVFQNG 167
L + N + G FSL + LI G P W F
Sbjct: 159 SNGKKRVLTTWKSNSDPSPGEFSLEITPQIPTQGLIRRGSVPYWRCGPWAKTRFSGISGI 218
Query: 168 RTKYNSSRIAVLDDFGSFSSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKVTGSWM 227
Y S +V+ D + + S +S + + + +T+ +G +++ L +W
Sbjct: 219 DASYVSP-FSVVQDTAAGTGS--FSYSTL-RNYNLSY-VTLTPEGKMKI--LWDDGNNWK 271
Query: 228 ISWQALMQPGKVHGVCGKNGICVYTPEPKCSCPPGY-----EATEPGDWSKGCKPKFNRT 282
+ P ++G CG G+CV + PKC C G+ E G+W+ GC + +
Sbjct: 272 LHLSLPENPCDLYGRCGPYGLCVRSDPPKCECLKGFVPKSDEEWGKGNWTSGCVRRTKLS 331
Query: 283 C---SSSLTEVKFVGV--PNTDFYGFDLN-YSQTVSKEACMKLCLDDCRCSGFSYRLTGQ 336
C SS T+ K + TD DL+ ++ ++ E C + CL +C C+ F+Y ++G
Sbjct: 332 CQAKSSMKTQGKDTDIFYRMTDVKTPDLHQFASFLNAEQCYQGCLGNCSCTAFAY-ISGI 390
Query: 337 GLCFTKSVLFNGFKAPNFPGIIYLKLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSMY 396
G L + + + ++++L +SE L G+ S+ +I++G
Sbjct: 391 GCLVWNGELADTVQFLSSGEFLFIRLA----SSE---LAGS------SRRKIIVG----- 432
Query: 397 DTTAKRVRWSYFYWFALAIGAIEVFVIASGWWLLFRRQDVPSSLEEGYQALSSQFRRFSY 456
TT +L+I I VF W ++ D + E F
Sbjct: 433 -TTV-----------SLSIFLILVFAAIMLWRYRAKQNDAWKNGFERQDVSGVNFFEMHT 480
Query: 457 AELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIY 515
+ S +LG+GG G VYKG L DG+ + VKRL QG E F E++ I K+
Sbjct: 481 IRTATNNFSPSNKLGQGGFGPVYKGKLVDGKEIGVKRLASSSGQGTEEFMNEITLISKLQ 540
Query: 516 HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS---SYFLGWKERFKVALGTAKGLAY 572
H NLVR+ G+C +G +LLIYE++ +SLD +F + L W +RF + G A+GL Y
Sbjct: 541 HRNLVRLLGYCIDGEEKLLIYEFMVNKSLDIFIFDPCLKFELDWPKRFNIIQGIARGLLY 600
Query: 573 LH--------H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE 613
LH H D PKI+DFGLA++ Q ++ GT GYM+PE
Sbjct: 601 LHRDSRLRVIHRDLKVSNILLDDRMNPKISDFGLARMFQGTQYQDNTRRVVGTLGYMSPE 660
Query: 614 WASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673
+A + K D+YS+GV++LE++ G R+S ++ D E K + Y +
Sbjct: 661 YAWAGLFSEKSDIYSFGVLMLEIISGKRISRFIYGD-------------ESKGLLAYTWD 707
Query: 674 AWIE----EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727
+W E ++D L + A + IG+ CV + RP V+ S+L T+
Sbjct: 708 SWCETGGSNLLDRDLTDTCQAFEVARCVQIGLLCVQHEAVDRPNTLQVL-SMLTSATD 764
|
|
| TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 312 (114.9 bits), Expect = 3.4e-65, Sum P(3) = 3.4e-65
Identities = 95/355 (26%), Positives = 158/355 (44%)
Query: 1 KTFSCGFYGLGGNAYLF-SIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDV 59
KTF GF+ G + + F IW+ + D+ VVW ANR P++ Q + +G +VL D
Sbjct: 49 KTFELGFFSPGSSTHRFLGIWYGNIEDKAVVWVANRATPISDQSGVLMISNDGNLVLLDG 108
Query: 60 DDTVIWMTN---TTSTGADRA-ELLDTGNLVLKDRH-GKILWQSFDYPTDTLLPNQVFRK 114
+ +W +N +T+ +R + DTGN VL + + +W+SF++PTDT LP R
Sbjct: 109 KNITVWSSNIESSTTNNNNRVVSIHDTGNFVLSETDTDRPIWESFNHPTDTFLPQMRVRV 168
Query: 115 STK------LISGVGNGTYASGYFSLYFDNDNVLRLI-YDGPEIS---SVYWPDPDFDVF 164
+ + +S + G +SL D ++ ++G + S W F
Sbjct: 169 NPQTGDNHAFVSWRSETDPSPGNYSLGVDPSGAPEIVLWEGNKTRKWRSGQWNSAIFTGI 228
Query: 165 QNGRTKYNSSRIAVLDDFGSFSSSDE---LKFSAIDMGFGIKRRLTMDYDGNLRLYSLNK 221
N N L F S DE + F+ + + R + Y+G N+
Sbjct: 229 PNMSLLTN-----YLYGFKLSSPPDETGSVYFTYVPSDPSVLLRFKVLYNGTEEELRWNE 283
Query: 222 VTGSWMISWQALMQPGKV---HGVCGKNGIC-VYTPEPKCSCPPGYEATEPGDWSKGCKP 277
W +Q+ +P + CGK GIC + CSC GYE G+WS+GC+
Sbjct: 284 TLKKWT-KFQS--EPDSECDQYNRCGKFGICDMKGSNGICSCIHGYEQVSVGNWSRGCRR 340
Query: 278 KFNRTCSSSLT--EVKFVGVPNTDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFS 330
+ C +++ E +F+ + + F++ V E C + CL +C C+ +S
Sbjct: 341 RTPLKCERNISVGEDEFLTLKSVKLPDFEIPEHNLVDPEDCRERCLRNCSCNAYS 395
|
|
| TAIR|locus:2200923 AT1G61550 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 232/794 (29%), Positives = 364/794 (45%)
Query: 3 FSCGFYGLGGNAYLF-SIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDD 61
F GF+ + L+ IWF RTVVW ANR+ V + ++ NG+++L D
Sbjct: 40 FELGFFSPNNSRNLYVGIWFKGIIPRTVVWVANRENSVTDATADLAISSNGSLLLFDGKH 99
Query: 62 TVIWMTNTT-STGADRAELLDTGNLVLKDR-HGKILWQSFDYPTDTLLP--NQVFRKST- 116
+ +W T T ++ AEL D+GNL++ D+ G LWQSF++ DT+LP + ++ T
Sbjct: 100 STVWSTGETFASNGSSAELSDSGNLLVIDKVSGITLWQSFEHLGDTMLPYSSLMYNPGTG 159
Query: 117 --KLISGVGNGTYA-SGYFSLYFDNDNVLR-LIYDGPEISSVYWPDPDFDVFQNGRTKYN 172
+++S + T G F Y + I G S YW + +T++
Sbjct: 160 EKRVLSSWKSYTDPLPGEFVGYITTQVPPQGFIMRG---SKPYWRSGPW-----AKTRFT 211
Query: 173 SSRIAVLDDFGSFS----SSDELKFSAIDMGFGIKRRL-TMDYDGNLRLYSLNKVTGSWM 227
+ FS ++ + FS + F KR L + +G+L++ N W+
Sbjct: 212 GVPLTDESYTHPFSVQQDANGSVYFSHLQRNF--KRSLLVLTSEGSLKVTHHNGT--DWV 267
Query: 228 ISWQALMQPGKVHGVCGKNGICVYTPEPKCSCPPGY-----EATEPGDWSKGCKPKFNRT 282
++ +GVCG G+CV + PKC C G+ E + G+W+ GC +
Sbjct: 268 LNIDVPANTCDFYGVCGPFGLCVMSIPPKCKCFKGFVPQFSEEWKRGNWTGGCVRRTELL 327
Query: 283 CSSSLT--EVK-FVGVPNT---DFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQ 336
C + T V F V N DFY F + S E C + CL +C C F+Y + G
Sbjct: 328 CQGNSTGRHVNVFHPVANIKPPDFYEF----VSSGSAEECYQSCLHNCSCLAFAY-INGI 382
Query: 337 GLCFTKSVLFNGFKAPNFPGIIYLKLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSMY 396
G L + + + G + L + + +SE G N + + IV S S++
Sbjct: 383 GCLIWNQELMDVMQF-SVGGEL---LSIRLASSEM----GGNQRKKTIIASIV--SISLF 432
Query: 397 DTTAKRVRWSYFYW-FALAIGAIEVFVIASGWWLLFRRQDVPSSLEEGYQALSSQFRRFS 455
T A ++ +W + L AI V G W R D+ S E L F
Sbjct: 433 VTLASA---AFGFWRYRLKHNAIVSKVSLQGAW----RNDLKS---EDVSGL--YFFEMK 480
Query: 456 YAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKI 514
E+ + S +LG+GG G VYKG L DG+ +AVKRL QG+E F E+ I K+
Sbjct: 481 TIEIATNNFSLVNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEILLISKL 540
Query: 515 YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS---YFLGWKERFKVALGTAKGLA 571
H+NLVR+ G C EG RLL+YE++ +SLD +F S + W +RF + G A+GL
Sbjct: 541 QHINLVRILGCCIEGEERLLVYEFMVNKSLDTFIFDSRKRVEIDWPKRFSIIQGIARGLL 600
Query: 572 YLH--------H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
YLH H D+ PKI+DFGLA++ + +I GT GYM+P
Sbjct: 601 YLHRDSRLRIIHRDVKVSNILLDDKMNPKISDFGLARMYEGTKYQDNTRRIVGTLGYMSP 660
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672
E+A + K D YS+GV++LE++ G ++S + + +E K + Y
Sbjct: 661 EYAWTGVFSEKSDTYSFGVLLLEVISGEKISRFSYD-------------KERKNLLAYAW 707
Query: 673 EAWIEE----IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-TMD--SVVQSLLECE 725
E+W E +D + ++ + IG+ CV + RP T++ S++ + +
Sbjct: 708 ESWCENGGVGFLDKDATDSCHPSEVGRCVQIGLLCVQHQPADRPNTLELLSMLTTTSDLP 767
Query: 726 TESE----IHITDD 735
E +H +DD
Sbjct: 768 LPKEPTFAVHTSDD 781
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| TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 312 (114.9 bits), Expect = 5.2e-63, Sum P(3) = 5.2e-63
Identities = 103/369 (27%), Positives = 159/369 (43%)
Query: 3 FSCGFYGLGGNA-YLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDD 61
F GF+ ++ + IW+ RT VW ANRD P++ + N +V+ D D
Sbjct: 51 FELGFFNPASSSRWYLGIWYKIIPIRTYVWVANRDNPLSSSNGTLKISGNN-LVIFDQSD 109
Query: 62 TVIWMTNTTSTGAD-----RAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKST 116
+W TN T G D AELLD GN +L+D + ++LWQSFD+PTDTLL
Sbjct: 110 RPVWSTNIT--GGDVRSPVAAELLDNGNFLLRDSNNRLLWQSFDFPTDTLLAEMKLGWDQ 167
Query: 117 K------LISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQNGRTK 170
K L S +SG FS + E S +Y P NG +
Sbjct: 168 KTGFNRILRSWKTTDDPSSGEFSTKLETSEFPEFYICSKE-SILYRSGP-----WNGM-R 220
Query: 171 YNSSRIAVLDDFGSFS---SSDELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKVTGSWM 227
++S + D+ ++ S +E+ +S + RL ++ G L+ + + T SW
Sbjct: 221 FSSVPGTIQVDYMVYNFTASKEEVTYSYRINKTNLYSRLYLNSAGLLQRLTWFETTQSWK 280
Query: 228 ISWQALMQPGKVHGVCGKNGICVYTPEPKCSCPPGYEATEPGDW-----SKGCKPKFNRT 282
W + + VCG G C P C C G++ W S GC K +
Sbjct: 281 QLWYSPKDLCDNYKVCGNFGYCDSNSLPNCYCIKGFKPVNEQAWDLRDGSAGCMRKTRLS 340
Query: 283 CSS--SLTEVKFVGVPNTDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFS---YRLTGQG 337
C T +K + +P+T D + + + C + CL+DC C+ F+ R G G
Sbjct: 341 CDGRDGFTRLKRMKLPDTTATIVD----REIGLKVCKERCLEDCNCTAFANADIRNGGSG 396
Query: 338 -LCFTKSVL 345
+ +T+ +L
Sbjct: 397 CVIWTREIL 405
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| TAIR|locus:2197734 AT1G61370 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 310 (114.2 bits), Expect = 3.8e-62, Sum P(3) = 3.8e-62
Identities = 103/363 (28%), Positives = 163/363 (44%)
Query: 2 TFSCGFYGLGG--NAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDV 59
T+ GF+ N Y+ IWF + R VVW ANRD+PV + ++ NG+++L +
Sbjct: 45 TYELGFFSPNNSRNQYV-GIWFKNITPRVVVWVANRDKPVTNNAANLTINSNGSLILVER 103
Query: 60 DDTVIWMTNTT-STGADRAELLDTGNLVLKDRHG-KILWQSFDYPTDT-LLPNQVF---- 112
+ V+W T S+ RAELL+ GNLVL D + LW+SF++ DT LL + V
Sbjct: 104 EQNVVWSIGETFSSNELRAELLENGNLVLIDGVSERNLWESFEHLGDTMLLESSVMYDVP 163
Query: 113 RKSTKLISGVGNGTYAS-GYFSLYFDNDNVLR-LIYDGPEISSVYWPD-PDFDVFQNGRT 169
+++S N T S G F + I G S YW P V G
Sbjct: 164 NNKKRVLSSWKNPTDPSPGEFVAELTTQVPPQGFIMRG---SRPYWRGGPWARVRFTGIP 220
Query: 170 KYNSSRIAVLDDFGSFSSSDELKFSAIDMGFGIKRR------LTMDYDGNLRLYSLNKVT 223
+ + S ++ F S ++ + + ++RR T+ G+L++ N +
Sbjct: 221 EMDGSHVS------KFDISQDVAAGTGSLTYSLERRNSNLSYTTLTSAGSLKII-WNNGS 273
Query: 224 GSWMISWQALMQPGKVHGVCGKNGICVYTPEPKCSCPPGYEATEPGDWSK-----GCKPK 278
G W+ +A + V+ CG G+C+ + PKC C G+ +W+K GC +
Sbjct: 274 G-WVTDLEAPVSSCDVYNTCGPFGLCIRSNPPKCECLKGFVPKSDEEWNKRNWTGGCMRR 332
Query: 279 FNRTC--SSSLTEVKFVGVPNTDFYGFDLN--------YSQTVSKEACMKLCLDDCRCSG 328
N +C +SS T N D + N Y +++E C + CL +C C+
Sbjct: 333 TNLSCDVNSSAT----AQANNGDIFDIVANVKPPDFYEYLSLINEEDCQQRCLGNCSCTA 388
Query: 329 FSY 331
FSY
Sbjct: 389 FSY 391
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.11 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00021394001 | SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (803 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 736 | |||
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 3e-42 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 2e-34 | |
| pfam01453 | 109 | pfam01453, B_lectin, D-mannose binding lectin | 8e-31 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 8e-28 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 9e-28 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 4e-27 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 9e-26 | |
| cd00028 | 116 | cd00028, B_lectin, Bulb-type mannose-specific lect | 8e-25 | |
| smart00108 | 114 | smart00108, B_lectin, Bulb-type mannose-specific l | 1e-23 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 1e-21 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 3e-21 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 3e-20 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 8e-20 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 8e-19 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 1e-18 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-17 | |
| cd01098 | 84 | cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain | 1e-16 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 1e-15 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 3e-15 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 3e-15 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 5e-15 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 4e-14 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 8e-14 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-13 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 3e-13 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 7e-13 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 8e-13 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 9e-13 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 1e-12 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 2e-12 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 4e-12 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 4e-12 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 5e-12 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 6e-12 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 1e-11 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 2e-11 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 2e-11 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 3e-11 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 4e-11 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 4e-11 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 4e-11 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 5e-11 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 5e-11 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 7e-11 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 1e-10 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 1e-10 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 1e-10 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 3e-10 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 4e-10 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 4e-10 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 5e-10 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 7e-10 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 7e-10 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 8e-10 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 2e-09 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 3e-09 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 4e-09 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 6e-09 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 6e-09 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 7e-09 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 8e-09 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 1e-08 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 1e-08 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 2e-08 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 3e-08 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 3e-08 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 4e-08 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 4e-08 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 6e-08 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 6e-08 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 9e-08 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 1e-07 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 1e-07 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 1e-07 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 1e-07 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 1e-07 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 2e-07 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 2e-07 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 2e-07 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 2e-07 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-07 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 2e-07 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 2e-07 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 3e-07 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 3e-07 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 3e-07 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 3e-07 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 4e-07 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 4e-07 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 4e-07 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 5e-07 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 5e-07 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 5e-07 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 5e-07 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 6e-07 | |
| cd01100 | 73 | cd01100, APPLE_Factor_XI_like, Subfamily of PAN/AP | 6e-07 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 7e-07 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 7e-07 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 7e-07 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 9e-07 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-06 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 1e-06 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 1e-06 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 1e-06 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 2e-06 | |
| pfam00954 | 110 | pfam00954, S_locus_glycop, S-locus glycoprotein fa | 2e-06 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 3e-06 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 3e-06 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 3e-06 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 3e-06 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 3e-06 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 4e-06 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 4e-06 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 4e-06 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 5e-06 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 6e-06 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 7e-06 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 8e-06 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 8e-06 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 1e-05 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 1e-05 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 1e-05 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 1e-05 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 1e-05 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 2e-05 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 2e-05 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 2e-05 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 2e-05 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 3e-05 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 4e-05 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 4e-05 | |
| smart00473 | 78 | smart00473, PAN_AP, divergent subfamily of APPLE d | 4e-05 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 5e-05 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 6e-05 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 7e-05 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 7e-05 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 7e-05 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 8e-05 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 8e-05 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 1e-04 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 1e-04 | |
| smart00223 | 79 | smart00223, APPLE, APPLE domain | 1e-04 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 1e-04 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 1e-04 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 1e-04 | |
| smart00750 | 176 | smart00750, KIND, kinase non-catalytic C-lobe doma | 1e-04 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 2e-04 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 2e-04 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 2e-04 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 2e-04 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 2e-04 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 2e-04 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 2e-04 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 3e-04 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 3e-04 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 3e-04 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 3e-04 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 3e-04 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 3e-04 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 3e-04 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 4e-04 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 4e-04 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 4e-04 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 4e-04 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 5e-04 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 5e-04 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 5e-04 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 5e-04 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 6e-04 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 6e-04 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 6e-04 | |
| cd00053 | 36 | cd00053, EGF, Epidermal growth factor domain, foun | 7e-04 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 7e-04 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 9e-04 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 9e-04 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 0.001 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 0.001 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 0.001 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 0.001 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 0.001 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 0.001 | |
| pfam00024 | 78 | pfam00024, PAN_1, PAN domain | 0.001 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 0.001 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 0.002 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 0.002 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 0.002 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 0.002 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 0.002 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 0.003 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 0.003 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 0.003 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 0.003 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 0.003 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 0.003 | |
| cd05077 | 262 | cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do | 0.003 | |
| pfam00008 | 32 | pfam00008, EGF, EGF-like domain | 0.003 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 0.003 | |
| cd00054 | 38 | cd00054, EGF_CA, Calcium-binding EGF-like domain, | 0.004 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 0.004 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 0.004 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 0.004 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 0.004 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 153 bits (390), Expect = 3e-42
Identities = 79/276 (28%), Positives = 117/276 (42%), Gaps = 42/276 (15%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVR 521
+LG G G VYK G+ VAVK L + + ++ E+ + ++ H N+VR
Sbjct: 3 LLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVR 62
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH------- 574
+ + H L+ EY E L +L L E K+AL +GL YLH
Sbjct: 63 LIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHR 122
Query: 575 ---------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW-ASNLPITAKV 624
+ KIADFGLAK + +SS + GT YMAPE KV
Sbjct: 123 DLKPENILLDENGVVKIADFGLAK--KLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKV 180
Query: 625 DVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRL 684
DV+S GV++ E++ G GE +L+ R + + ++E W
Sbjct: 181 DVWSLGVILYELLTGKPPF-----SGENILDQLQLIRRILGPPLEFDEPKWSS--GSEEA 233
Query: 685 KGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720
K LI C+++D SKRPT + ++Q
Sbjct: 234 KD---------LIK---KCLNKDPSKRPTAEEILQH 257
|
Length = 260 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 130 bits (330), Expect = 2e-34
Identities = 61/195 (31%), Positives = 87/195 (44%), Gaps = 24/195 (12%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFC 526
LG GG G VY G+ VA+K + D E E+ + K+ H N+V+++G
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 527 SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLH----------- 574
+ H L+ EY E SL L L E ++ L +GL YLH
Sbjct: 61 EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKP 120
Query: 575 ------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAKVDVY 627
D + K+ADFGL+KL S+ S I GT YMAPE + K D++
Sbjct: 121 ENILLDSDNGKVKLADFGLSKLLT--SDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIW 178
Query: 628 SYGVVILEMVKGIRL 642
S GV++ E+ + L
Sbjct: 179 SLGVILYELPELKDL 193
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 8e-31
Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 26 DRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGAD-RAELLDTGN 84
++TVVW ANR P+ L+ +G +VL D + V+W +NT+ G+ A L D GN
Sbjct: 1 NQTVVWVANRLNPLTDSSYTLILQSDGNLVLYDGNGRVVWSSNTSGKGSGCVAVLQDDGN 60
Query: 85 LVLKDRHGKILWQSFDYPTDTLLPNQVFRKST 116
LVL D GK+LWQSFD+PTDTLLP Q
Sbjct: 61 LVLYDNSGKVLWQSFDHPTDTLLPGQKDGNVV 92
|
These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 8e-28
Identities = 69/273 (25%), Positives = 103/273 (37%), Gaps = 44/273 (16%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVK--RLGDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
E+LG G G VY G+ VA+K + + + E E+ + K+ H N+VR+
Sbjct: 3 ILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRL 62
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H-- 575
+ + L+ EY E L L L E L YLH H
Sbjct: 63 YDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRD 122
Query: 576 ---------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
++ K+ADFGLA+ G + F GT YMAPE VD+
Sbjct: 123 LKPENILLDEDGHVKLADFGLARQLDPGEKLTTFV---GTPEYMAPEVLLGKGYGKAVDI 179
Query: 627 YSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKG 686
+S GV++ E++ G + G+ Q EL + + + K E E D
Sbjct: 180 WSLGVILYELLTGKPP--F---PGDDQLLELFKKIGKPKPPFPPPEWDISPEAKD----- 229
Query: 687 KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
LI + +D KR T + +Q
Sbjct: 230 ---------LIR---KLLVKDPEKRLTAEEALQ 250
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 9e-28
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 466 FKEELGRGGSGAVYKGVL-----ADGRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMN 518
++LG G G VYKG L VAVK L + EE F E S + K+ H N
Sbjct: 3 LGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPN 62
Query: 519 LVRMWGFCSEGRHRLLIYEYVEKQSLDKHL-FSSYFLGWKERFKVALGTAKGLAYLH--- 574
+VR+ G C++G ++ EY+ L L L K+ ++AL AKG+ YL
Sbjct: 63 IVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLESKN 122
Query: 575 -------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG---YMAPEWASNL 618
+ KI+DFGL++ + + G K +MAPE +
Sbjct: 123 FVHRDLAARNCLVTENLVVKISDFGLSRDIY---EDDYYRKRGGGKLPIKWMAPESLKDG 179
Query: 619 PITAKVDVYSYGVVILEM 636
T+K DV+S+GV++ E+
Sbjct: 180 KFTSKSDVWSFGVLLWEI 197
|
Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 4e-27
Identities = 71/284 (25%), Positives = 110/284 (38%), Gaps = 55/284 (19%)
Query: 465 SFKEELGRGGSGAVYKGVL-----ADGRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHM 517
+ ++LG G G VYKG L VAVK L + +++ F E + K+ H
Sbjct: 2 TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL-FSSYFLGWKERFKVALGTAKGLAYLH-- 574
N+V++ G C+E ++ EY+E L +L + L + AL A+G+ YL
Sbjct: 62 NVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESK 121
Query: 575 --------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG---YMAPEWASN 617
+ KI+DFGL++ + RG K +MAPE
Sbjct: 122 NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRK----RGGKLPIRWMAPESLKE 177
Query: 618 LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677
T+K DV+S+GV++ E+ GE + EV +
Sbjct: 178 GKFTSKSDVWSFGVLLWEI----------FTLGEQPYPGMS--NEEVLEYLKNGYRLPQP 225
Query: 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
P L L+ + C ED RPT +V+ L
Sbjct: 226 PNCPPEL---------YDLM---LQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 106 bits (268), Expect = 9e-26
Identities = 69/285 (24%), Positives = 111/285 (38%), Gaps = 56/285 (19%)
Query: 465 SFKEELGRGGSGAVYKGVLADG-----RAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHM 517
+ ++LG G G VYKG L VAVK L + +++ F E + K+ H
Sbjct: 2 TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLH- 574
N+V++ G C+E +++ EY+ L +L + L + AL A+G+ YL
Sbjct: 62 NIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLES 121
Query: 575 ---------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG---YMAPEWAS 616
+ KI+DFGL++ + + +G K +MAPE
Sbjct: 122 KNFIHRDLAARNCLVGENLVVKISDFGLSRD---LYDDDYYKV-KGGKLPIRWMAPESLK 177
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676
T+K DV+S+GV++ E+ GE + EV +
Sbjct: 178 EGKFTSKSDVWSFGVLLWEI----------FTLGEEPYPGMS--NAEVLEYLKKGYRLPK 225
Query: 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
P L L+ + C ED RPT +V+ L
Sbjct: 226 PPNCPPEL---------YKLM---LQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Score = 99.3 bits (248), Expect = 8e-25
Identities = 45/103 (43%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 2 TFSCGFYGLGGNAYL-FSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVD 60
F GF+ L + I + S RTVVW ANRD P +L+ +G +V+ D
Sbjct: 16 LFELGFFKLIMQSRDYNLILYKGS-SRTVVWVANRDNPSGS-SCTLTLQSDGNLVIYDGS 73
Query: 61 DTVIWMTNTTS-TGADRAELLDTGNLVLKDRHGKILWQSFDYP 102
TV+W +NTT G LLD GNLVL D G LWQSFDYP
Sbjct: 74 GTVVWSSNTTRVNGNYVLVLLDDGNLVLYDSDGNFLWQSFDYP 116
|
The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. Length = 116 |
| >gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 1e-23
Identities = 45/101 (44%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 2 TFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDD 61
F GF+ L I + S RTVVW ANRD PV+ +L+ +G +VL D D
Sbjct: 16 LFELGFFTLIMQNDYNLILYKSS-SRTVVWVANRDNPVSD-SCTLTLQSDGNLVLYDGDG 73
Query: 62 TVIWMTNTTS-TGADRAELLDTGNLVLKDRHGKILWQSFDY 101
V+W +NTT G LLD GNLV+ D G LWQSFDY
Sbjct: 74 RVVWSSNTTGANGNYVLVLLDDGNLVIYDSDGNFLWQSFDY 114
|
Length = 114 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 94.9 bits (237), Expect = 1e-21
Identities = 63/206 (30%), Positives = 91/206 (44%), Gaps = 41/206 (19%)
Query: 468 EELGRGGSGAVYKGVLADG----RAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVR 521
++LG G G VYKG L VAVK L + EE F E + K+ H N+VR
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHL---------FSSYFLGWKERFKVALGTAKGLAY 572
+ G C+E L+ EY+E L +L L K+ A+ AKG+ Y
Sbjct: 61 LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120
Query: 573 L------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQ----IRGTKGYMAP 612
L H D + KI+DFGL++ + + IR +MAP
Sbjct: 121 LASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIR----WMAP 176
Query: 613 EWASNLPI-TAKVDVYSYGVVILEMV 637
E + I T+K DV+S+GV++ E+
Sbjct: 177 E-SLKDGIFTSKSDVWSFGVLLWEIF 201
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 93.8 bits (234), Expect = 3e-21
Identities = 60/203 (29%), Positives = 84/203 (41%), Gaps = 40/203 (19%)
Query: 468 EELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWA---EVSTIGKIYHMNLVRMW 523
E LGRG G+VY + D G +AVK + EE A E+ + + H N+VR +
Sbjct: 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65
Query: 524 GFC-SEGRHRLLIY-EYVEKQSLDKHLFSSYFLGWKERFK------VALGTA---KGLAY 572
G E ++ L I+ EYV SL L ++F + T +GLAY
Sbjct: 66 GSERDEEKNTLNIFLEYVSGGSLSSLL---------KKFGKLPEPVIRKYTRQILEGLAY 116
Query: 573 LH-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH H + K+ADFG AK +RGT +MAPE
Sbjct: 117 LHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIR 176
Query: 617 NLPITAKVDVYSYGVVILEMVKG 639
D++S G ++EM G
Sbjct: 177 GEEYGRAADIWSLGCTVIEMATG 199
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 3e-20
Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 24/189 (12%)
Query: 466 FKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
+G+G G V G G+ VAVK L D + F AE S + + H NLV++ G
Sbjct: 10 LGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGV 68
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFS--SYFLGWKERFKVALGTAKGLAYL------HHD- 576
+G ++ EY+ K SL +L S + ++ AL +G+ YL H D
Sbjct: 69 VLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDL 128
Query: 577 ---------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVY 627
+ K++DFGLAK + +G +S + ++ T APE + K DV+
Sbjct: 129 AARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLP-VKWT----APEALREKKFSTKSDVW 183
Query: 628 SYGVVILEM 636
S+G+++ E+
Sbjct: 184 SFGILLWEI 192
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 89.2 bits (222), Expect = 8e-20
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 28/197 (14%)
Query: 465 SFKEELGRGGSGAVYKG-VLADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLV 520
E++G+GG G VYK G+ VA+K + + E++ E+ + K H N+V
Sbjct: 3 EILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKK-EKII-NEIQILKKCKHPNIV 60
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH---- 574
+ +G + ++ E+ SL K L S E V KGL YLH
Sbjct: 61 KYYGSYLKKDELWIVMEFCSGGSL-KDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGI 119
Query: 575 -H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITA 622
H + E K+ DFGL+ + S++ + + GT +MAPE + P
Sbjct: 120 IHRDIKAANILLTSDGEVKLIDFGLSA---QLSDTKARNTMVGTPYWMAPEVINGKPYDY 176
Query: 623 KVDVYSYGVVILEMVKG 639
K D++S G+ +E+ +G
Sbjct: 177 KADIWSLGITAIELAEG 193
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 86.5 bits (215), Expect = 8e-19
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 42/204 (20%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVR 521
+ +GRG G VYKG+ L G VA+K++ + + E+ + + H N+V+
Sbjct: 4 LGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVK 63
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDK----------HLFSSYFLGWKERFKVALGTAKGLA 571
G +I EY E SL + L + Y ++V +GLA
Sbjct: 64 YIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYV------YQVL----QGLA 113
Query: 572 YLH-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
YLH H + K+ADFG+A ++ S + + GT +MAPE
Sbjct: 114 YLHEQGVIHRDIKAANILTTKDGVVKLADFGVA--TKLNDVSKDDASVVGTPYWMAPEVI 171
Query: 616 SNLPITAKVDVYSYGVVILEMVKG 639
+ D++S G ++E++ G
Sbjct: 172 EMSGASTASDIWSLGCTVIELLTG 195
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 88.3 bits (217), Expect = 1e-18
Identities = 67/294 (22%), Positives = 104/294 (35%), Gaps = 55/294 (18%)
Query: 466 FKEELGRGGSGAVYKGVLADGRAVAVKRL----GDLHQGEEVFWAEVSTIGKIYH-MNLV 520
+LG G G VY D + VA+K L + E F E+ + + H N+V
Sbjct: 4 ILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIV 61
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLD---KHLFSSYFLGWKERFKVALGTAKGLAYLH--- 574
+++ F + L+ EYV+ SL+ K + L E + L YLH
Sbjct: 62 KLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG 121
Query: 575 --------------HDEFEPKIADFGLAKLSQRGSNSSQ----FSQIRGTKGYMAPEWAS 616
D K+ DFGLAKL ++S S GT GYMAPE
Sbjct: 122 IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLL 181
Query: 617 NL---PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673
L ++ D++S G+ + E++ G L F E +
Sbjct: 182 GLSLAYASSSSDIWSLGITLYELLTG-----------------LPPFEGEKNSSATSQTL 224
Query: 674 AWIEEIVDPRLKGKFNTNQAAT----LIGIGISCVDEDRSKRPTMDSVVQSLLE 723
I E+ P L + + + + +D R + S + L
Sbjct: 225 KIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLL 278
|
Length = 384 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 87.2 bits (216), Expect = 1e-17
Identities = 93/359 (25%), Positives = 161/359 (44%), Gaps = 68/359 (18%)
Query: 401 KRVRWSYFYWFALA--IGAIEVFVIASGWWLLFRRQDVPSSL-----EEG---YQALSSQ 450
KRVR + +WF + +GA V + + ++ R ++ L E+G Q S+
Sbjct: 620 KRVRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNN-LELKRVENEDGTWELQFFDSK 678
Query: 451 FRRFSYAELKKSTKSFKEE--LGRGGSGAVYKG-VLADGRAVAVKRLGDLHQGEEVFWAE 507
+ S + S KEE + RG GA YKG + +G VK + D++ A+
Sbjct: 679 VSK-SIT-INDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIAD 736
Query: 508 VSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
+GK+ H N+V++ G C + LI+EY+E ++L + L + L W+ R K+A+G A
Sbjct: 737 ---MGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIA 790
Query: 568 KGLAYLH-------------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG 608
K L +LH + EP + +LS G + +
Sbjct: 791 KALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL------RLSLPGLLCTDTKCFISS-A 843
Query: 609 YMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDG-EGQEAELKRFVREVKRK 667
Y+APE IT K D+Y +G++++E++ G ++ E G G E R+
Sbjct: 844 YVAPETRETKDITEKSDIYGFGLILIELLTGKSPAD--AEFGVHGSIVEWARYC------ 895
Query: 668 ILYEE---EAWIEEIVDPRLKGK--FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
Y + + WI DP ++G N N+ ++ + + C D + RP + V+++L
Sbjct: 896 --YSDCHLDMWI----DPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTL 948
|
Length = 968 |
| >gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins | Back alignment and domain information |
|---|
Score = 74.8 bits (184), Expect = 1e-16
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Query: 279 FNRTCSSSLTEVKFVGVPNTDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQGL 338
C + F+ +P+ + +S E C + CL +C C+ ++Y G
Sbjct: 1 TPLNCGGDGSTDGFLKLPDVKLPDNASAIT-AISLEECREACLSNCSCTAYAYNNGS-GG 58
Query: 339 CFTKSVLFNGFKAPNFPG-IIYLKLP 363
C + L N ++ + G +YL+L
Sbjct: 59 CLLWNGLLNNLRSLSSGGGTLYLRLA 84
|
PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. Length = 84 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 1e-15
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 25/201 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGD---LHQGEEVFWAEVSTIGKI 514
E + + + +LG G G V++G+ + VA+K L L Q + F EV + ++
Sbjct: 2 ERPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQD--FQKEVQALKRL 59
Query: 515 YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAY 572
H +L+ ++ CS G +I E +EK SL L S L +A A+G+AY
Sbjct: 60 RHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAY 119
Query: 573 L------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
L H D + K+ADFGLA+L + S +I + APE AS
Sbjct: 120 LEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKI--PYKWTAPEAAS 177
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ + K DV+S+G+++ EM
Sbjct: 178 HGTFSTKSDVWSFGILLYEMF 198
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 3e-15
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 465 SFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
E++G G SG VYK A G+ VA+K++ Q +E+ E+ + H N+V +
Sbjct: 22 KNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYY 81
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH------- 574
G ++ EY++ SL + + F+ E V +GL YLH
Sbjct: 82 DSYLVGDELWVVMEYMDGGSL-TDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHR 140
Query: 575 ---------HDEFEPKIADFGL-AKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ K+ADFG A+L++ S + + GT +MAPE KV
Sbjct: 141 DIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNS---VVGTPYWMAPEVIKRKDYGPKV 197
Query: 625 DVYSYGVVILEMVKG 639
D++S G++ +EM +G
Sbjct: 198 DIWSLGIMCIEMAEG 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 76.1 bits (188), Expect = 3e-15
Identities = 54/193 (27%), Positives = 83/193 (43%), Gaps = 32/193 (16%)
Query: 469 ELGRGGSGAVYKGVL-ADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G SG VYK G+ A+K++ GD +++ E+ T+ +V+ +G
Sbjct: 8 VLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLL-RELKTLRSCESPYVVKCYG 66
Query: 525 -FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLHHD----- 576
F EG +++ EY++ SL L E +A KGL YLH
Sbjct: 67 AFYKEGEISIVL-EYMDGGSLADLL--KKVGKIPEPVLAYIARQILKGLDYLHTKRHIIH 123
Query: 577 ------------EFEPKIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK 623
+ E KIADFG++K L + F GT YM+PE +
Sbjct: 124 RDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFV---GTVTYMSPERIQGESYSYA 180
Query: 624 VDVYSYGVVILEM 636
D++S G+ +LE
Sbjct: 181 ADIWSLGLTLLEC 193
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 5e-15
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 46/209 (22%)
Query: 469 ELGRGGSGAVYKGVLAD------GRAVAVKRLGD---LHQGEEVFWAEVSTIGKIYHMNL 519
ELG+G G VY+G+ VA+K + + + + E F E S + + ++
Sbjct: 13 ELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIE-FLNEASVMKEFNCHHV 71
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHL--------FSSYF--LGWKERFKVALGTAKG 569
VR+ G S G+ L++ E + K L +L + ++ ++A A G
Sbjct: 72 VRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADG 131
Query: 570 LAYLH----------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG----- 608
+AYL ++ KI DFG+ R + + + G KG
Sbjct: 132 MAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMT----RDIYETDYYRK-GGKGLLPVR 186
Query: 609 YMAPEWASNLPITAKVDVYSYGVVILEMV 637
+MAPE + T K DV+S+GVV+ EM
Sbjct: 187 WMAPESLKDGVFTTKSDVWSFGVVLWEMA 215
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 4e-14
Identities = 55/197 (27%), Positives = 80/197 (40%), Gaps = 37/197 (18%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKGV + +G VA+K L + + + E + + H ++VR+
Sbjct: 15 LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKH-------LFSSYFLGWKERFKVALGTAKGLAYL-- 573
G C + LI + + L + + S Y L W + AKG++YL
Sbjct: 75 LGICLSSQV-QLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQI------AKGMSYLEE 127
Query: 574 ----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H D KI DFGLAKL + +MA E +
Sbjct: 128 KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRI 187
Query: 620 ITAKVDVYSYGVVILEM 636
T K DV+SYGV + E+
Sbjct: 188 YTHKSDVWSYGVTVWEL 204
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 71.9 bits (176), Expect = 8e-14
Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 42/213 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL-ADGR---AVAVKRL--GDLHQGEEVFWAEVSTI 511
E+ S + ++ +G G G V++G+L GR AVA+K L G + + F +E S +
Sbjct: 1 EIHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIM 60
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL------FSSYFLGWKERFKVALG 565
G+ H N++R+ G ++ + ++I EY+E +LDK+L FSSY L R G
Sbjct: 61 GQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLR-----G 115
Query: 566 TAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQ-----IR 604
A G+ YL H D E K++DFGL+++ + + + IR
Sbjct: 116 IAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIR 175
Query: 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMV 637
T APE + T+ DV+S+G+V+ E++
Sbjct: 176 WT----APEAIAYRKFTSASDVWSFGIVMWEVM 204
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 2e-13
Identities = 56/204 (27%), Positives = 81/204 (39%), Gaps = 39/204 (19%)
Query: 466 FKEELGRGGSGAVYKGVL-----ADGRAVAVKRL----GDLHQGEEVFWAEVSTIGKIYH 516
F ++LG G G V G VAVK L + H+ + F E+ + + H
Sbjct: 8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSD--FEREIEILRTLDH 65
Query: 517 MNLVRMWGFCSE--GRHRLLIYEYVEKQSLDKHL-FSSYFLGWKERFKVALGTAKGLAYL 573
N+V+ G C + GR LI EY+ SL +L + K + KG+ YL
Sbjct: 66 ENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYL 125
Query: 574 ------HHD----------EFEPKIADFGLAKLSQRGS-----NSSQFSQIRGTKGYMAP 612
H D E KI+DFGLAK+ S I + AP
Sbjct: 126 GSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIF----WYAP 181
Query: 613 EWASNLPITAKVDVYSYGVVILEM 636
E ++ DV+S+GV + E+
Sbjct: 182 ECLRTSKFSSASDVWSFGVTLYEL 205
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 70.0 bits (172), Expect = 3e-13
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 25/201 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG G G V+ G VAVK L E F E + K+ H
Sbjct: 2 EIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHD 61
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS--SYFLGWKERFKVALGTAKGLAYL-- 573
LV+++ CSE ++ EY+ K SL L S L + +A A+G+AYL
Sbjct: 62 KLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLES 121
Query: 574 ----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
H D KIADFGLA+L + +++ G K + APE A+
Sbjct: 122 RNYIHRDLAARNILVGENLVCKIADFGLARLIE----DDEYTAREGAKFPIKWTAPEAAN 177
Query: 617 NLPITAKVDVYSYGVVILEMV 637
T K DV+S+G+++ E+V
Sbjct: 178 YGRFTIKSDVWSFGILLTEIV 198
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 69.3 bits (170), Expect = 7e-13
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 35/202 (17%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVK--RLGDL-HQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
+G G G VY V L G +AVK R+ D + + E+ + + H NLV+ +G
Sbjct: 8 IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGV 67
Query: 526 CSEGRHRLLIY-EYVEKQSLDKHLFSSYFLGWKERFKV----ALGTAKGLAYLH-----H 575
R ++ I+ EY +L++ L G V L +GLAYLH H
Sbjct: 68 EVH-REKVYIFMEYCSGGTLEELLE----HGRILDEHVIRVYTLQLLEGLAYLHSHGIVH 122
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNS--SQFSQIRGTKGYMAPEWASNLPITA 622
+ +P K+ DFG A + + + + + GT YMAPE +
Sbjct: 123 RDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKG 182
Query: 623 K---VDVYSYGVVILEMVKGIR 641
D++S G V+LEM G R
Sbjct: 183 HGRAADIWSLGCVVLEMATGKR 204
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 8e-13
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 46/221 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRA------VAVKRLGD--LHQGEEVFWAEVS 509
+++ T K ELG G G V+ G VAVK L + + + F E
Sbjct: 1 HVQRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAE 60
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS--------------SYFLG 555
+ H N+V+ +G C+EG ++++EY+E L+K L S L
Sbjct: 61 LLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELT 120
Query: 556 WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQ 599
+ ++A+ A G+ YL H D + KI DFG++ R ++
Sbjct: 121 LSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMS----RDVYTTD 176
Query: 600 FSQIRGTK----GYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ ++ G +M PE T + DV+S+GVV+ E+
Sbjct: 177 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEI 217
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 9e-13
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 34/203 (16%)
Query: 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMN 518
+ S +F +ELG G G V+ G VA+K + + E+ F E + K+ H N
Sbjct: 1 IDPSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPN 60
Query: 519 LVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFK------VALGTAKGLAY 572
LV+++G C++ R ++ EY+ L +Y K + + + + Y
Sbjct: 61 LVQLYGVCTKQRPIFIVTEYMANGCL-----LNYLRERKGKLGTEWLLDMCSDVCEAMEY 115
Query: 573 L------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPE 613
L H D + K++DFGLA R Q++ +GTK + PE
Sbjct: 116 LESNGFIHRDLAARNCLVGEDNVVKVSDFGLA----RYVLDDQYTSSQGTKFPVKWAPPE 171
Query: 614 WASNLPITAKVDVYSYGVVILEM 636
++K DV+S+GV++ E+
Sbjct: 172 VFDYSRFSSKSDVWSFGVLMWEV 194
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 1e-12
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 44/211 (20%)
Query: 468 EELGRGGSGAVYKGVLAD-GRAVAVK----------RLGDLHQGE-EVFWAEVSTIGKIY 515
E +G+G G VY + G +AVK R + + +E+ T+ +
Sbjct: 7 ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD 66
Query: 516 HMNLVRMWGFCSEGRHRLLIY-EYVEKQSLDKHLFSSYFLGWKERFKVAL------GTAK 568
H+N+V+ GF L I+ EYV S+ +Y RF+ L +
Sbjct: 67 HLNIVQYLGF-ETTEEYLSIFLEYVPGGSIGS-CLRTY-----GRFEEQLVRFFTEQVLE 119
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
GLAYLH H + + KI+DFG++K S ++ Q ++G+ +MAP
Sbjct: 120 GLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAP 179
Query: 613 EWASN--LPITAKVDVYSYGVVILEMVKGIR 641
E + +AKVD++S G V+LEM G R
Sbjct: 180 EVIHSYSQGYSAKVDIWSLGCVVLEMFAGRR 210
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 2e-12
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 24/192 (12%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ +E+G G G V+ G + R VA+K + + EE F E + K+ H LV+++G
Sbjct: 7 TLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYG 66
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER-FKVALGTAKGLAYLHHDEF----- 578
C+E L++E++E L +L + +E + L +G+AYL
Sbjct: 67 VCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDL 126
Query: 579 -----------EPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASNLPITAKV 624
K++DFG+ + Q++ GTK + +PE S ++K
Sbjct: 127 AARNCLVGENQVVKVSDFGMTRFVL----DDQYTSSTGTKFPVKWSSPEVFSFSKYSSKS 182
Query: 625 DVYSYGVVILEM 636
DV+S+GV++ E+
Sbjct: 183 DVWSFGVLMWEV 194
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 67.0 bits (164), Expect = 4e-12
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 24/193 (12%)
Query: 468 EELGRGGSGAVYKGV--LADGR--AVAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLVR 521
+ELG G G+V KGV + G+ VAVK L + G++ F E S + ++ H +VR
Sbjct: 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL------HH 575
+ G C +G +L+ E L K+L + + ++A A G+AYL H
Sbjct: 61 LIGVC-KGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHR 119
Query: 576 D----------EFEPKIADFGLAKLSQRGSNSSQFSQI-RGTKGYMAPEWASNLPITAKV 624
D + KI+DFG+++ GS+ + + R + APE + ++K
Sbjct: 120 DLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKS 179
Query: 625 DVYSYGVVILEMV 637
DV+SYGV + E
Sbjct: 180 DVWSYGVTLWEAF 192
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 4e-12
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 25/201 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ +++ +LG G G V++G+ + VAVK L + F AE + K+ H
Sbjct: 2 EIDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHP 61
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYF--LGWKERFKVALGTAKGLAYL-- 573
L++++ C+ ++ E ++ SL ++L L + +A A G+AYL
Sbjct: 62 KLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA 121
Query: 574 ----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
H D K+ADFGLA++ + + G K + APE A
Sbjct: 122 QNYIHRDLAARNVLVGENNICKVADFGLARVIK----EDIYEAREGAKFPIKWTAPEAAL 177
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ K DV+S+G+++ E+V
Sbjct: 178 YNRFSIKSDVWSFGILLTEIV 198
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 5e-12
Identities = 61/202 (30%), Positives = 85/202 (42%), Gaps = 39/202 (19%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWA------EVSTIGKIYHMNLV 520
E LG G G+VY+G+ L DG AVK + G+ A E++ + K+ H N+V
Sbjct: 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIV 65
Query: 521 RMWGFCSEGRHRLLIY-EYVEKQSLDKHL--FSSYFLGWKERFKVALGTA---KGLAYLH 574
+ G E L I+ E V SL K L + S+ + L T GL YLH
Sbjct: 66 QYLGTEREE-DNLYIFLELVPGGSLAKLLKKYGSFP-----EPVIRLYTRQILLGLEYLH 119
Query: 575 HDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASN 617
K+ADFG+AK S + F +G+ +MAPE A
Sbjct: 120 DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSF---KGSPYWMAPEVIAQQ 176
Query: 618 LPITAKVDVYSYGVVILEMVKG 639
D++S G +LEM G
Sbjct: 177 GGYGLAADIWSLGCTVLEMATG 198
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 6e-12
Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 40/202 (19%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHM---NLVR 521
E +GRG GAVY+G + GR VA+K + ++V EV+ + ++ N+ +
Sbjct: 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITK 66
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFK--VALGTAKGLAYLHHD--- 576
+G +G +I EY E S+ + + E++ + L Y+H
Sbjct: 67 YYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPI---AEKYISVIIREVLVALKYIHKVGVI 123
Query: 577 -------------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT-- 621
K+ DFG+A L NSS+ S GT +MAPE IT
Sbjct: 124 HRDIKAANILVTNTGNVKLCDFGVAALLN--QNSSKRSTFVGTPYWMAPE-----VITEG 176
Query: 622 ----AKVDVYSYGVVILEMVKG 639
K D++S G+ I EM G
Sbjct: 177 KYYDTKADIWSLGITIYEMATG 198
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 1e-11
Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 23/189 (12%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVK--RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
E++G+G G VYKGVL VAVK R + F E + + H N+V++ G
Sbjct: 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGV 60
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLF-SSYFLGWKERFKVALGTAKGLAYL------HHD-- 576
C + + ++ E V SL L L K+ +++L A G+ YL H D
Sbjct: 61 CVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLA 120
Query: 577 --------EFEPKIADFGLAKLSQRG--SNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
KI+DFG+++ + G + S QI + APE + T++ DV
Sbjct: 121 ARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI--PIKWTAPEALNYGRYTSESDV 178
Query: 627 YSYGVVILE 635
+SYG+++ E
Sbjct: 179 WSYGILLWE 187
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 2e-11
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 27/195 (13%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVR 521
E+LG G G+VYK + G+ VA+K + DL + + E+S + + +V+
Sbjct: 7 ILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIK----EISILKQCDSPYIVK 62
Query: 522 MWGFCSEGRHRLLIYEYVEKQS-LDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H 575
+G + ++ EY S D ++ L +E + T KGL YLH H
Sbjct: 63 YYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIH 122
Query: 576 -----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+E + K+ADFG++ Q ++ + + GT +MAPE + K
Sbjct: 123 RDIKAGNILLNEEGQAKLADFGVS--GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKA 180
Query: 625 DVYSYGVVILEMVKG 639
D++S G+ +EM +G
Sbjct: 181 DIWSLGITAIEMAEG 195
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 2e-11
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 23/190 (12%)
Query: 469 ELGRGGSGAV-YKGVLADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
++G G +G V V + G+ VAVK++ DL Q E+ + EV + H N+V M+
Sbjct: 27 KIGEGSTGIVCIATVKSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 85
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP 580
G ++ E++E +L + + + ++ V L K L+ LH H + +
Sbjct: 86 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKS 144
Query: 581 -----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSY 629
K++DFG +Q + + GT +MAPE S LP +VD++S
Sbjct: 145 DSILLTHDGRVKLSDFGFC--AQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSL 202
Query: 630 GVVILEMVKG 639
G++++EMV G
Sbjct: 203 GIMVIEMVDG 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 3e-11
Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 28/188 (14%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG-FC 526
E +G G GAV +G G+ VAVK + + F E + + K++H NLVR+ G
Sbjct: 12 EIIGEGEFGAVLQGEYT-GQKVAVKNI-KCDVTAQAFLEETAVMTKLHHKNLVRLLGVIL 69
Query: 527 SEGRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYL------HHD-- 576
G + ++ E + K +L L + + + + +L A+G+ YL H D
Sbjct: 70 HNGLY--IVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLA 127
Query: 577 --------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
+ K++DFGLA++ G ++S+ + APE + ++K DV+S
Sbjct: 128 ARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPV-----KWTAPEALKHKKFSSKSDVWS 182
Query: 629 YGVVILEM 636
YGV++ E+
Sbjct: 183 YGVLLWEV 190
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 63.9 bits (156), Expect = 4e-11
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 39/199 (19%)
Query: 468 EELGRGGSGAVYKGVLA----DGRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVR 521
+ +G G G V +G L VA+K L ++ F E S +G+ H N++R
Sbjct: 10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIR 69
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHL------FSSYFLGWKERFKVALGTAKGLAYL-- 573
+ G ++ R ++I EY+E SLDK L F+ + + G A G+ YL
Sbjct: 70 LEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFT-----VGQLVGMLRGIASGMKYLSE 124
Query: 574 ----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
H D K++DFG LS+R +S +G K + APE +
Sbjct: 125 MNYVHRDLAARNILVNSNLVCKVSDFG---LSRRLEDSEATYTTKGGKIPIRWTAPEAIA 181
Query: 617 NLPITAKVDVYSYGVVILE 635
T+ DV+S+G+V+ E
Sbjct: 182 YRKFTSASDVWSFGIVMWE 200
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 4e-11
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 48/223 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLHQG--EEVFWAEVS 509
E+ S F EELG G G VYKG L +VA+K L + + ++ F E
Sbjct: 1 EIPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAE 60
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS----------------SYF 553
+ + H N+V + G C++ + +++EY+ L + L
Sbjct: 61 LMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSS 120
Query: 554 LGWKERFKVALGTAKGLAYL--HH--------------DEFEPKIADFGLAKLSQRGSNS 597
L + +A+ A G+ YL HH + KI+DFGL++
Sbjct: 121 LDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYY 180
Query: 598 SQFSQ----IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
S+ +R +M PE T + D++S+GVV+ E+
Sbjct: 181 RVQSKSLLPVR----WMPPEAILYGKFTTESDIWSFGVVLWEI 219
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 4e-11
Identities = 60/209 (28%), Positives = 84/209 (40%), Gaps = 45/209 (21%)
Query: 470 LGRGGSGAVYKG----VLADGRA---VAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLV 520
LG G G VY+G +L G VAVK L G Q ++ F E + H N+V
Sbjct: 3 LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHL-------FSSYFLGWKERFKVALGTAKGLAYL 573
++ G C + +I E +E L +L F L KE + L AKG YL
Sbjct: 63 KLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL 122
Query: 574 HHDEF---------------------EPKIADFGLAKLSQRGSNSSQFSQIRGTK----G 608
F KI DFGLA R S + + G
Sbjct: 123 EQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA----RDIYKSDYYRKEGEGLLPVR 178
Query: 609 YMAPEWASNLPITAKVDVYSYGVVILEMV 637
+MAPE + T + DV+S+GV++ E++
Sbjct: 179 WMAPESLLDGKFTTQSDVWSFGVLMWEIL 207
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 5e-11
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 29/193 (15%)
Query: 469 ELGRGGSGAVYKGVLA----DGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
++G G +G V +A GR VAVK++ DL Q E+ + EV + H N+V M
Sbjct: 26 KIGEGSTGIV---CIATDKSTGRQVAVKKM-DLRKQQRRELLFNEVVIMRDYQHPNIVEM 81
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDE 577
+ G ++ E++E +L + + + ++ V L K L++LH H +
Sbjct: 82 YSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRD 140
Query: 578 FEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
+ K++DFG +Q + + GT +MAPE S LP +VD+
Sbjct: 141 IKSDSILLTSDGRVKLSDFGFC--AQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDI 198
Query: 627 YSYGVVILEMVKG 639
+S G++++EMV G
Sbjct: 199 WSLGIMVIEMVDG 211
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 5e-11
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 26/201 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T ++LG G G V+ G VA+K L E F AE + + ++ H
Sbjct: 2 EVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHP 61
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYL-- 573
LVR++ ++ +I EY+E SL L + L + +A A+G+A++
Sbjct: 62 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER 120
Query: 574 ----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
H D KIADFGLA+L + ++++ G K + APE +
Sbjct: 121 KNYIHRDLRAANILVSETLCCKIADFGLARLIE----DNEYTAREGAKFPIKWTAPEAIN 176
Query: 617 NLPITAKVDVYSYGVVILEMV 637
T K DV+S+G+++ E+V
Sbjct: 177 YGTFTIKSDVWSFGILLTEIV 197
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 7e-11
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 23/190 (12%)
Query: 469 ELGRGGSGAVYKGVLA-DGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
++G G +G V G+ VAVK++ DL Q E+ + EV + +H N+V M+
Sbjct: 29 KIGEGSTGIVCIATEKHTGKQVAVKKM-DLRKQQRRELLFNEVVIMRDYHHENVVDMYNS 87
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP 580
G ++ E++E +L + + + ++ V L + L+YLH H + +
Sbjct: 88 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKS 146
Query: 581 -----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSY 629
K++DFG +Q + + GT +MAPE S LP +VD++S
Sbjct: 147 DSILLTSDGRIKLSDFGFC--AQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSL 204
Query: 630 GVVILEMVKG 639
G++++EM+ G
Sbjct: 205 GIMVIEMIDG 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 1e-10
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVF---WAEVSTIGKIYHMNLVR 521
E +G G + VY + L + VA+KR+ DL + + EV + + H N+V+
Sbjct: 5 LIEVIGVGATAVVYAAICLPNNEKVAIKRI-DLEKCQTSVDELRKEVQAMSQCNHPNVVK 63
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL---GTAKGLAYLH---- 574
+ G L+ Y+ SL + SSY G + +A KGL YLH
Sbjct: 64 YYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ 123
Query: 575 -HDEFEP-----------KIADFGL-AKLSQRGSNSSQFSQ-IRGTKGYMAPEWASNLP- 619
H + + KIADFG+ A L+ G + + + GT +MAPE +
Sbjct: 124 IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHG 183
Query: 620 ITAKVDVYSYGVVILEMVKG 639
K D++S+G+ +E+ G
Sbjct: 184 YDFKADIWSFGITAIELATG 203
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 1e-10
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 29/193 (15%)
Query: 469 ELGRGGSGAVYKGVLA----DGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
++G G +G V +A GR VAVK + DL Q E+ + EV + H N+V M
Sbjct: 28 KIGEGSTGIV---CIAREKHSGRQVAVKMM-DLRKQQRRELLFNEVVIMRDYQHQNVVEM 83
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDE 577
+ G ++ E+++ +L + S L ++ V + L YLH H +
Sbjct: 84 YKSYLVGEELWVLMEFLQGGAL-TDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRD 142
Query: 578 FEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
+ K++DFG +Q + + + GT +MAPE S P +VD+
Sbjct: 143 IKSDSILLTLDGRVKLSDFGFC--AQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDI 200
Query: 627 YSYGVVILEMVKG 639
+S G++++EMV G
Sbjct: 201 WSLGIMVIEMVDG 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 62.0 bits (150), Expect = 1e-10
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 2 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 61
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHH 575
LV+++ SE ++ EY+ K SL L +L + +A A G+AY+
Sbjct: 62 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 120
Query: 576 ----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
+ K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 121 MNYVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 176
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 177 YGRFTIKSDVWSFGILLTELTTKGRV 202
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 3e-10
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 28/197 (14%)
Query: 467 KEELGRGGSGAVYKGVL-ADGRAVAVKRLG----DLHQGEEVFWAEVSTIGKIYHMNLVR 521
++G+G G V+K V AD R A+K++ + + EE E + K+ ++R
Sbjct: 5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAI-DEARVLAKLDSSYIIR 63
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER--FKVALGTAKGLAYLH----- 574
+ + ++ EY E L K L E ++ + GLA+LH
Sbjct: 64 YYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKIL 123
Query: 575 HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQ-IRGTKGYMAPEWASNLPITA 622
H + + KI D G+AKL S+++ F+ I GT Y++PE + P
Sbjct: 124 HRDIKSLNLFLDAYDNVKIGDLGVAKLL---SDNTNFANTIVGTPYYLSPELCEDKPYNE 180
Query: 623 KVDVYSYGVVILEMVKG 639
K DV++ GVV+ E G
Sbjct: 181 KSDVWALGVVLYECCTG 197
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 4e-10
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 38/203 (18%)
Query: 467 KEELGRGGSGAVYKGVL-ADGRA---VAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLV 520
+E +G G G V +G L G+ VA+K L G + F +E S +G+ H N++
Sbjct: 9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNII 68
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKE-RFKVA--LGTAKGLA------ 571
+ G ++ R ++I E++E +LD FL + +F V +G +G+A
Sbjct: 69 HLEGVVTKSRPVMIITEFMENGALDS------FLRQNDGQFTVIQLVGMLRGIAAGMKYL 122
Query: 572 ----YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEW 614
Y+H D K++DFGL++ + ++ ++ G K + APE
Sbjct: 123 SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEA 182
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
+ T+ DV+SYG+V+ E++
Sbjct: 183 IAYRKFTSASDVWSYGIVMWEVM 205
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 4e-10
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 32/193 (16%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLG-DLHQGEEV-FWAEVSTIGKIYHMNLVRMWGF 525
E LG+G G V+KG L D VAVK DL Q ++ F +E + + H N+V++ G
Sbjct: 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGV 60
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYF------LGWKERFKVALGTAKGLAYLH----- 574
C++ + ++ E V F S+ L K+ K AL A G+AYL
Sbjct: 61 CTQRQPIYIVMELVPGGD-----FLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCI 115
Query: 575 HDEFEP-----------KIADFGLAKLSQRG-SNSSQFSQIRGTKGYMAPEWASNLPITA 622
H + KI+DFG+++ G +SS QI + APE + ++
Sbjct: 116 HRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI--PIKWTAPEALNYGRYSS 173
Query: 623 KVDVYSYGVVILE 635
+ DV+SYG+++ E
Sbjct: 174 ESDVWSYGILLWE 186
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 60.2 bits (147), Expect = 5e-10
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 42/202 (20%)
Query: 467 KEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG-----EEVFWAEVSTIGKIYHMNLV 520
+++G+G G VY +DG+ +K + DL E+ EV + K+ H N++
Sbjct: 5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEI-DLSNMSEKEREDAL-NEVKILKKLNHPNII 62
Query: 521 RMWGFCSEGRHRLLIYEYVE---------KQSLDKHLFSSYFLGWKERFKVALGTAKGLA 571
+ + E ++ EY + KQ + F + ++ L L
Sbjct: 63 KYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQI-LDWFVQLCLA----LK 117
Query: 572 YLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQ-IRGTKGYMAPEW 614
YLH H + +P K+ DFG++K+ S++ ++ + GT Y++PE
Sbjct: 118 YLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVL---SSTVDLAKTVVGTPYYLSPEL 174
Query: 615 ASNLPITAKVDVYSYGVVILEM 636
N P K D++S G V+ E+
Sbjct: 175 CQNKPYNYKSDIWSLGCVLYEL 196
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 59.8 bits (146), Expect = 7e-10
Identities = 54/203 (26%), Positives = 82/203 (40%), Gaps = 45/203 (22%)
Query: 470 LGRGGSGAVYKGV--LADGRAVAV----KRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG+G G V V G+ A+ K+ + E E + + +I H +V++
Sbjct: 1 LGKGSFGKVLL-VRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLH 59
Query: 524 -GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAK--------GLAYLH 574
F +E L+ EY L HL + + + A+ L YLH
Sbjct: 60 YAFQTE-EKLYLVLEYAPGGELFSHL--------SKEGRFSEERARFYAAEIVLALEYLH 110
Query: 575 -----HDEFEP-----------KIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASN 617
+ + +P K+ DFGLAK LS GS ++ F GT Y+APE
Sbjct: 111 SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC---GTPEYLAPEVLLG 167
Query: 618 LPITAKVDVYSYGVVILEMVKGI 640
VD +S GV++ EM+ G
Sbjct: 168 KGYGKAVDWWSLGVLLYEMLTGK 190
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 7e-10
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 33/196 (16%)
Query: 469 ELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWA---EVSTIGKIYHMNLVRMWG 524
ELG G SG V K + G+ +AVK + L E + E+ + K +V +G
Sbjct: 8 ELGAGNSGVVSKVLHRPTGKIMAVKTI-RLEINEAIQKQILRELDILHKCNSPYIVGFYG 66
Query: 525 -FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERF--KVALGTAKGLAYLH------ 574
F + G + + EY++ SLDK G ER K+A+ KGL YLH
Sbjct: 67 AFYNNGDISICM-EYMDGGSLDK--ILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKII 123
Query: 575 HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK 623
H + +P K+ DFG+ S + NS + + GT YMAPE + K
Sbjct: 124 HRDVKPSNILVNSRGQIKLCDFGV---SGQLVNSLAKTFV-GTSSYMAPERIQGNDYSVK 179
Query: 624 VDVYSYGVVILEMVKG 639
D++S G+ ++E+ G
Sbjct: 180 SDIWSLGLSLIELATG 195
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 8e-10
Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + ++LG G G V+ G VAVK L E F E + K+ H
Sbjct: 2 EIPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHD 61
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLAYLHH 575
LV+++ SE ++ EY+ K SL L L +A A G+AY+
Sbjct: 62 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER 120
Query: 576 ----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
D KIADFGLA+L + ++++ +G K + APE A
Sbjct: 121 MNYIHRDLRSANILVGDGLVCKIADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 176
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 177 YGRFTIKSDVWSFGILLTELVTKGRV 202
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 2e-09
Identities = 60/283 (21%), Positives = 108/283 (38%), Gaps = 69/283 (24%)
Query: 470 LGRGGSGAVYK-GVLADGRAVAVKR--LGDLHQGE-EVFWAEVSTIGKIYHMNLVRMWGF 525
LG+G G+VYK L+D + A+K LG + Q E E E+ + + H N++
Sbjct: 8 LGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEA 67
Query: 526 CSEGRHRLLIYEY---------VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-- 574
+G ++ EY + K+ + L +E +++ + +GL LH
Sbjct: 68 FLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPE-----QEIWRIFIQLLRGLQALHEQ 122
Query: 575 ---HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPI 620
H + + KI D G++K+ ++ +Q GT YMAPE P
Sbjct: 123 KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQI----GTPHYMAPEVWKGRPY 178
Query: 621 TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680
+ K D++S G ++ EM E + + +++ K+
Sbjct: 179 SYKSDIWSLGCLLYEMATF-------APPFEARSMQ------DLRYKV------------ 213
Query: 681 DPRLKGKF---NTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720
+GK+ + L S + RP D ++ S
Sbjct: 214 ---QRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 58.3 bits (142), Expect = 3e-09
Identities = 57/212 (26%), Positives = 86/212 (40%), Gaps = 59/212 (27%)
Query: 467 KEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWA----EVSTIGKIYHMNLVR 521
E+LG G G VYK G VA+K++ L EE + E+S + ++ H N+V+
Sbjct: 4 LEKLGEGTYGVVYKARDKKTGEIVALKKI-RLDNEEEGIPSTALREISLLKELKHPNIVK 62
Query: 522 MWGFCSEGRHRLLIYEYVE---KQSLDKHLFSSYFLGWKERFKVALGTAK--------GL 570
+ R L++EY + K+ LDK ++ K GL
Sbjct: 63 LLDVIHTERKLYLVFEYCDMDLKKYLDKR-----------PGPLSPNLIKSIMYQLLRGL 111
Query: 571 AYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW 614
AY H H + +P K+ADFGLA+ G ++ T Y APE
Sbjct: 112 AYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAF--GIPLRTYTHEVVTLWYRAPE- 168
Query: 615 ASNLPI-------TAKVDVYSYGVVILEMVKG 639
I + VD++S G + EM+ G
Sbjct: 169 -----ILLGSKHYSTAVDIWSVGCIFAEMITG 195
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 4e-09
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 43/221 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 2 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 61
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSL-------DKHLFSSYFLGWKERFKVALGTAKG 569
NLV++ G C+ +I E++ +L ++ ++ L +A +
Sbjct: 62 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSA 116
Query: 570 LAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYM 610
+ YL F K+ADFGL++L + ++ G K +
Sbjct: 117 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH----AGAKFPIKWT 172
Query: 611 APEWASNLPITAKVDVYSYGVVILEMVK-------GIRLSN 644
APE + + K DV+++GV++ E+ GI LS
Sbjct: 173 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 213
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 6e-09
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 37/207 (17%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + ++LG G G V+ G + VAVK L + F E + + + H
Sbjct: 2 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 61
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL--------GTAKG 569
LVR++ ++ +I EY+ K SL FL E KV L A+G
Sbjct: 62 KLVRLYAVVTKEEPIYIITEYMAKGSLLD------FLKSDEGGKVLLPKLIDFSAQIAEG 115
Query: 570 LA------YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYM 610
+A Y+H D KIADFGLA++ + ++++ G K +
Sbjct: 116 MAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE----DNEYTAREGAKFPIKWT 171
Query: 611 APEWASNLPITAKVDVYSYGVVILEMV 637
APE + T K DV+S+G+++ E+V
Sbjct: 172 APEAINFGSFTIKSDVWSFGILLYEIV 198
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 6e-09
Identities = 55/200 (27%), Positives = 80/200 (40%), Gaps = 35/200 (17%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRL------GDLHQGEEVFWAEVSTIGKIYHMNLVR 521
LG G G+V K L + + + DL + ++ E+ +V+
Sbjct: 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQK--QIL-RELEINKSCKSPYIVK 63
Query: 522 MWG-FCSEGRHRLLI-YEYVEKQSLD----KHLFSSYFLGWKERFKVALGTAKGLAYLH- 574
+G F E + I EY E SLD K +G K K+A KGL+YLH
Sbjct: 64 YYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS 123
Query: 575 ----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + +P K+ DFG+ S NS GT YMAPE P
Sbjct: 124 RKIIHRDIKPSNILLTRKGQVKLCDFGV---SGELVNS-LAGTFTGTSFYMAPERIQGKP 179
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ DV+S G+ +LE+ +
Sbjct: 180 YSITSDVWSLGLTLLEVAQN 199
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 7e-09
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 46/220 (20%)
Query: 459 LKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLHQGEEV-FWAEVSTI 511
+K+ K ELG G G V+ D VAVK L + + F E +
Sbjct: 2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 61
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS---------------YFLGW 556
+ H ++VR +G C+EGR L+++EY+ L++ L S L
Sbjct: 62 TVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTL 121
Query: 557 KERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQF 600
+ +A A G+ YL H D KI DFG++ R S+ +
Sbjct: 122 GQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMS----RDIYSTDY 177
Query: 601 SQIRGTK----GYMAPEWASNLPITAKVDVYSYGVVILEM 636
++ G +M PE T + D++S+GVV+ E+
Sbjct: 178 YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEI 217
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 8e-09
Identities = 55/201 (27%), Positives = 78/201 (38%), Gaps = 34/201 (16%)
Query: 470 LGRGGSGAVYKGVLADGR------AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVR 521
LG G G VY+G+ VAVK L + Q E F E + K H N+VR
Sbjct: 14 LGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVR 73
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDK-------HLFSSYFLGWKERFKVALGTAKGLAYLH 574
+ G E R ++ E + L L K+ A AKG YL
Sbjct: 74 LIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE 133
Query: 575 HDEF-------------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
+ F KIADFG+A+ R S + + +M PE
Sbjct: 134 ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAF 193
Query: 616 SNLPITAKVDVYSYGVVILEM 636
+ T+K DV+S+GV++ E+
Sbjct: 194 LDGIFTSKTDVWSFGVLLWEI 214
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 1e-08
Identities = 54/209 (25%), Positives = 85/209 (40%), Gaps = 47/209 (22%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE--------EVFWAEVSTIGKIYHMNL 519
E LG+G G VY G+ G+ +AVK++ +L E EV + + H+N+
Sbjct: 6 EVLGKGAYGTVYCGLTNQGQLIAVKQV-ELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNI 64
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF---------KVALGTAKGL 570
V+ G C + + E+V S+ L RF K G+
Sbjct: 65 VQYLGTCLDDNTISIFMEFVPGGSISSIL---------NRFGPLPEPVFCKYTKQILDGV 115
Query: 571 AYLH-----HDEFEP-----------KIADFGLAK----LSQRGSNSSQFSQIRGTKGYM 610
AYLH H + + K+ DFG A+ + G++S+ + GT +M
Sbjct: 116 AYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWM 175
Query: 611 APEWASNLPITAKVDVYSYGVVILEMVKG 639
APE + K D++S G + EM G
Sbjct: 176 APEVINESGYGRKSDIWSIGCTVFEMATG 204
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 1e-08
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 2 EIPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHD 61
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSL--------DKHLFSSYFLGWKERFKVALGTAKG 569
LV ++ SE ++ E++ K SL K+L + + + +
Sbjct: 62 KLVPLYAVVSE-EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER 120
Query: 570 LAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
+ Y+H D KIADFGLA+L + ++++ +G K + APE A
Sbjct: 121 MNYIHRDLRAANILVGDNLVCKIADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 176
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 177 YGRFTIKSDVWSFGILLTELVTKGRV 202
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKG-VLADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
+G G G V K A G VA+K+ + E+V EV + ++ H N+V +
Sbjct: 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLK 66
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
L++EYVE+ L+ S L + +AY H H +
Sbjct: 67 EAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDI 126
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAKVDV 626
+P K+ DFG A+ + R +S + T+ Y APE + VDV
Sbjct: 127 KPENILVSESGVLKLCDFGFAR-ALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDV 185
Query: 627 YSYGVVILEMVKG 639
++ G ++ E++ G
Sbjct: 186 WAIGCIMAELLDG 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 3e-08
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 44/208 (21%)
Query: 468 EELGRGGSGAVYKGVLADGRA--VAVKRLGDLHQGE------------EVFWAEVSTIGK 513
E LG G G VYK + +A+K + ++H +EV+ I +
Sbjct: 6 EHLGSGAFGCVYKVRKKNNGQNLLALKEI-NVHNPAFGKDKRERDKSIGDIVSEVTIIKE 64
Query: 514 -IYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF------KVALGT 566
+ H N+VR + E ++ + +E L +H F+S K+RF + +
Sbjct: 65 QLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEH-FNS-LKEKKQRFTEERIWNIFVQM 122
Query: 567 AKGLAYLH------HDEFEPK-----------IADFGLAKLSQRGSNSSQFSQIRGTKGY 609
L YLH H + P I DFGLAK Q+ S S + GT Y
Sbjct: 123 VLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAK--QKQPESKLTSVV-GTILY 179
Query: 610 MAPEWASNLPITAKVDVYSYGVVILEMV 637
PE N P K DV+++G ++ +M
Sbjct: 180 SCPEIVKNEPYGEKADVWAFGCILYQMC 207
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 3e-08
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRL-------GDLHQGEEVFWAEVSTIGKIYHMNL 519
++LG G + Y+ + G +AVK++ + + E E+ + ++ H ++
Sbjct: 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHI 65
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVA--LGTAKGLAYLHHDE 577
+RM G E H L E++ S+ HL S Y +KE + +GL+YLH ++
Sbjct: 66 IRMLGATCEDSHFNLFVEWMAGGSV-SHLLSKYG-AFKEAVIINYTEQLLRGLSYLHENQ 123
Query: 578 F-----------------EPKIADFGLA-KLSQRGSNSSQFS-QIRGTKGYMAPEWASNL 618
+IADFG A +L+ +G+ + +F Q+ GT +MAPE
Sbjct: 124 IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGE 183
Query: 619 PITAKVDVYSYGVVILEMVKG 639
DV+S G VI+EM
Sbjct: 184 QYGRSCDVWSVGCVIIEMATA 204
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 4e-08
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 31/184 (16%)
Query: 486 GRAVAVKRLGDLHQGEE----VFWAEVSTIGKIYHMNLVRMW--GFCSEGRHRLLIYEYV 539
G VA+K L EE F E + ++YH N+V + G G ++EYV
Sbjct: 3 GHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGL-LFAVFEYV 61
Query: 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP-------------- 580
++L + L + L E ++ L LA H H + +P
Sbjct: 62 PGRTLREVLAADGALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPHA 121
Query: 581 KIADFGLAKL--SQRGSNSSQFS---QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILE 635
K+ DFG+ L R ++ + + ++ GT Y APE P+T D+Y++G++ LE
Sbjct: 122 KVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLE 181
Query: 636 MVKG 639
+ G
Sbjct: 182 CLTG 185
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 4e-08
Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 44/202 (21%)
Query: 470 LGRGGSGAVYK-GVLADGRAVAVKR--LGDLHQGEEVFWA-EVSTIGKIYHMNLVRMWGF 525
+G G G V+K G VA+K+ L L G E+ + H +V++
Sbjct: 8 IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDV 67
Query: 526 CSEGRHRLLIYEYV----------EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH- 574
G +L+ EY+ E++ L + SY ++ L KG+AY+H
Sbjct: 68 FPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYM-------RMLL---KGVAYMHA 117
Query: 575 ----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE--WASN 617
H + +P KIADFGLA+L Q+ T+ Y APE + +
Sbjct: 118 NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQV-ATRWYRAPELLYGAR 176
Query: 618 LPITAKVDVYSYGVVILEMVKG 639
VD+++ G + E++ G
Sbjct: 177 -KYDPGVDLWAVGCIFAELLNG 197
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 6e-08
Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 34/201 (16%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGE--EVFWAEVSTIGKIYHMNLVRM 522
+ +G G G VYK +A G VA+K + L G+ E+ E+S + + H N+V
Sbjct: 7 LIQRIGSGTYGDVYKARDIATGELVAIKVI-KLEPGDDFEIIQQEISMLKECRHPNIVAY 65
Query: 523 WGFCSEGRHRLLI-YEYVEKQSLDKHLFSSYFLGWKERFKVAL---GTAKGLAYLHH--- 575
+G R +L I EY SL G ++A T KGLAYLH
Sbjct: 66 FG-SYLRRDKLWIVMEYCGGGSLQDIY--QVTRGPLSELQIAYVCRETLKGLAYLHETGK 122
Query: 576 -------------DEFEPKIADFGL-AKLSQRGSNSSQFSQIRGTKGYMAPEWA---SNL 618
++ + K+ADFG+ A+L+ + F GT +MAPE A
Sbjct: 123 IHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFI---GTPYWMAPEVAAVERKG 179
Query: 619 PITAKVDVYSYGVVILEMVKG 639
K D+++ G+ +E+ +
Sbjct: 180 GYDGKCDIWALGITAIELAEL 200
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 6e-08
Identities = 63/212 (29%), Positives = 89/212 (41%), Gaps = 56/212 (26%)
Query: 466 FKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHM 517
F ++LG+G G+V L D G VAVK+L H E F E+ + + H
Sbjct: 8 FIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQ--HSTAEHLRDFEREIEILKSLQHD 65
Query: 518 NLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKERF---KVALGTA---KG 569
N+V+ G C S GR L L+ EY+ SL +L +ER K+ L + KG
Sbjct: 66 NIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKH-----RERLDHRKLLLYASQICKG 120
Query: 570 LAYL------HHD----------EFEPKIADFGLAKL---------SQRGSNSSQFSQIR 604
+ YL H D E KI DFGL K+ + S F
Sbjct: 121 MEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIF---- 176
Query: 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ APE + + DV+S+GVV+ E+
Sbjct: 177 ----WYAPESLTESKFSVASDVWSFGVVLYEL 204
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 9e-08
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 459 LKKSTKSFKEELGRGGSGAVYKG------VLADGRAVAVKRLGDLH-QGEEVFWAEVSTI 511
+K+ K ELG G G V+ D VAVK L D + F E +
Sbjct: 2 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELL 61
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF----------------SSYFLG 555
+ H ++V+ +G C +G ++++EY++ L+K L + LG
Sbjct: 62 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 121
Query: 556 WKERFKVALGTAKGLAYLHHDEFEP----------------KIADFGLAKLSQRGSNSSQ 599
+ +A A G+ YL F KI DFG++ R S+
Sbjct: 122 LSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS----RDVYSTD 177
Query: 600 FSQIRGTK----GYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ ++ G +M PE T + DV+S+GV++ E+
Sbjct: 178 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEI 218
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 1e-07
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 470 LGRGGSGAVYKGVLAD-GRAVAVKRL----GDLHQGEEV--FWAEVSTIGKIYHMNLVRM 522
LG+G G VY D GR +AVK++ +EV E+ + + H +V+
Sbjct: 10 LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69
Query: 523 WGFCSEGRHRLLIY-EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HD 576
+G C L I+ EY+ S+ L + L K +G+ YLH H
Sbjct: 70 YG-CLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHR 128
Query: 577 EFEP-----------KIADFGLAKLSQR-GSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ + K+ DFG +K Q S+ + + GT +M+PE S K
Sbjct: 129 DIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKA 188
Query: 625 DVYSYGVVILEMV 637
DV+S G ++EM+
Sbjct: 189 DVWSVGCTVVEML 201
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 1e-07
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY----KGVLADG--RAVAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY KGV+ D VA+K + + E F E S
Sbjct: 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 61
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS----------SYFLGWKER 559
+ + ++VR+ G S+G+ L+I E + + L +L S K+
Sbjct: 62 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKM 121
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ R + + +
Sbjct: 122 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT----RDIYETDYYR- 176
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +M+PE + T DV+S+GVV+ E+
Sbjct: 177 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 214
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 1e-07
Identities = 72/294 (24%), Positives = 128/294 (43%), Gaps = 62/294 (21%)
Query: 459 LKKSTKSFKEELGRGGSGAVYKGVLA-DGR---AVAVKRL--GDLHQGEEVFWAEVSTIG 512
+ S ++ +G G G V G L G+ VA+K L G + F +E S +G
Sbjct: 1 IDASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMG 60
Query: 513 KIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVA--LGTAKGL 570
+ H N++ + G ++ + +++ EY+E SLD ++ +F V +G +G+
Sbjct: 61 QFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLD-----AFLRKHDGQFTVIQLVGMLRGI 115
Query: 571 A----------YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--- 607
A Y+H D K++DFGL+++ + ++ + RG K
Sbjct: 116 ASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTT--RGGKIPI 173
Query: 608 GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRK 667
+ APE + T+ DV+SYG+V+ E V+ GE E+ ++V +
Sbjct: 174 RWTAPEAIAYRKFTSASDVWSYGIVMWE----------VMSYGERPYWEMSN--QDVIKA 221
Query: 668 ILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
I EE + RL + A L + + C +DR++RP + +V L
Sbjct: 222 I---EEGY-------RLPAPMDC--PAALHQLMLDCWQKDRNERPKFEQIVSIL 263
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 1e-07
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 26/197 (13%)
Query: 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMN 518
L + +G+G G V G G VAVK + + + F AE S + ++ H N
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSN 60
Query: 519 LVRMWGFCSEGRHRLLIY-EYVEKQSLDKHLFS--SYFLGWKERFKVALGTAKGLAYLHH 575
LV++ G E + L I EY+ K SL +L S LG K +L + + YL
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA 120
Query: 576 DEFE----------------PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
+ F K++DFGL K + ++ + + APE
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALREKK 175
Query: 620 ITAKVDVYSYGVVILEM 636
+ K DV+S+G+++ E+
Sbjct: 176 FSTKSDVWSFGILLWEI 192
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 1e-07
Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 22/174 (12%)
Query: 486 GRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVRMWGFCSE--GRHRLLIYEYVEK 541
G VAVK L G + E+ + +YH N+V+ G C+E G LI E++
Sbjct: 33 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 92
Query: 542 QSLDKHL-FSSYFLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIAD 584
SL ++L + + K++ K A+ KG+ YL H D E + KI D
Sbjct: 93 GSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD 152
Query: 585 FGLAKLSQRGSNSSQFSQIRGTKGY-MAPEWASNLPITAKVDVYSYGVVILEMV 637
FGL K + + + APE DV+S+GV + E++
Sbjct: 153 FGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELL 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-07
Identities = 51/192 (26%), Positives = 80/192 (41%), Gaps = 24/192 (12%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
E +G+G G VYK + + VA+K + DL + E E E+ + + + + +
Sbjct: 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVI-DLEEAEDEIEDIQQEIQFLSQCRSPYITKYY 65
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H--- 575
G +G +I EY S L L + GL YLH H
Sbjct: 66 GSFLKGSKLWIIMEYCGGGSC-LDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDI 124
Query: 576 --------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVY 627
+E + K+ADFG++ Q S S+ + GT +MAPE K D++
Sbjct: 125 KAANILLSEEGDVKLADFGVS--GQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIW 182
Query: 628 SYGVVILEMVKG 639
S G+ +E+ KG
Sbjct: 183 SLGITAIELAKG 194
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 48/197 (24%), Positives = 75/197 (38%), Gaps = 32/197 (16%)
Query: 468 EELGRGGSGAVYKG----VLADGRAVAVKRLGD--LHQGEEVFWAEVSTIGKIYHMNLVR 521
++LG G G V +G VAVK L L + F E + + + H NL+R
Sbjct: 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIR 60
Query: 522 MWGFCSEGRHRL-LIYEYVEKQSL----DKHLFSSYFLGWKERFKVALGTAKGLAYLHHD 576
++G H L ++ E SL K + + + A+ A G+ YL
Sbjct: 61 LYGVVLT--HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDY--AVQIANGMRYLESK 116
Query: 577 EF----------------EPKIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
F + KI DFGL + L Q + ++ + APE
Sbjct: 117 RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRT 176
Query: 620 ITAKVDVYSYGVVILEM 636
+ DV+ +GV + EM
Sbjct: 177 FSHASDVWMFGVTLWEM 193
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 52.8 bits (126), Expect = 2e-07
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 460 KKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQ-GEEVFWAEVSTIGKIYHM 517
KK T+ E++G+G SG V+ + +A G+ VA+K++ Q +E+ E+ + ++ +
Sbjct: 19 KKYTRY--EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNP 76
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD- 576
N+V G ++ EY+ SL + + + + V + L +LH +
Sbjct: 77 NIVNFLDSFLVGDELFVVMEYLAGGSLTD-VVTETCMDEAQIAAVCRECLQALEFLHANQ 135
Query: 577 ---------------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
+ K+ DFG +Q S+ S + GT +MAPE +
Sbjct: 136 VIHRDIKSDNVLLGMDGSVKLTDFGFC--AQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 193
Query: 622 AKVDVYSYGVVILEMVKG 639
KVD++S G++ +EMV+G
Sbjct: 194 PKVDIWSLGIMAIEMVEG 211
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 2e-07
Identities = 60/214 (28%), Positives = 88/214 (41%), Gaps = 31/214 (14%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGE-EVFWAEVSTIGKIYHMNLVRMWGFCS 527
LG+G G VY L+ +A+K + + + E++ + H N+V+ G S
Sbjct: 16 LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS 75
Query: 528 EGRHRLLIYEYVEKQSLDKHLFSSYF-LGWKERFKVALGTA--KGLAYLH-----HDEFE 579
E + E V SL L S + L E+ + +GL YLH H + +
Sbjct: 76 ENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIK 135
Query: 580 P------------KIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASNLP--ITAKV 624
KI+DFG +K L+ + F+ GT YMAPE P A
Sbjct: 136 GDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFT---GTLQYMAPEVIDKGPRGYGAPA 192
Query: 625 DVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELK 658
D++S G I+EM G +E GE Q A K
Sbjct: 193 DIWSLGCTIVEMATG---KPPFIELGEPQAAMFK 223
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 2e-07
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 24/192 (12%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+F +ELG G G V G VA+K + + E+ F E + K+ H LV+++G
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYG 66
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDEF----- 578
C++ R ++ EY+ L +L + ++ +G+AYL +F
Sbjct: 67 VCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDL 126
Query: 579 -----------EPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASNLPITAKV 624
K++DFGL+ R +++ G+K + PE ++K
Sbjct: 127 AARNCLVDDQGCVKVSDFGLS----RYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKS 182
Query: 625 DVYSYGVVILEM 636
DV+++GV++ E+
Sbjct: 183 DVWAFGVLMWEV 194
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 2e-07
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 22/173 (12%)
Query: 486 GRAVAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR--LLIYEYVEK 541
G VAVK L Q + E++ + +YH N+V+ G CSE + LI EYV
Sbjct: 33 GEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPL 92
Query: 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP-----------KIADF 585
SL +L + L + A +G+AYLH H + KI DF
Sbjct: 93 GSLRDYL-PKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDF 151
Query: 586 GLAKLSQRGSNSSQFSQIRGTKGY-MAPEWASNLPITAKVDVYSYGVVILEMV 637
GLAK G + + + + A E + DV+S+GV + E++
Sbjct: 152 GLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELL 204
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 52.8 bits (126), Expect = 2e-07
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 455 SYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQ-GEEVFWAEVSTIG 512
S + KK F E++G+G SG VY + +A G+ VA+K++ Q +E+ E+ +
Sbjct: 13 SVGDPKKKYTRF-EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMR 71
Query: 513 KIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAY 572
+ + N+V G ++ EY+ SL + + + + V + L +
Sbjct: 72 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALDF 130
Query: 573 LHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH ++ K+ DFG +Q S+ S + GT +MAPE +
Sbjct: 131 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSTMVGTPYWMAPEVVT 188
Query: 617 NLPITAKVDVYSYGVVILEMVKG 639
KVD++S G++ +EMV+G
Sbjct: 189 RKAYGPKVDIWSLGIMAIEMVEG 211
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 52.4 bits (125), Expect = 3e-07
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 44/218 (20%)
Query: 459 LKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLH-QGEEVFWAEVSTI 511
+K+ K ELG G G V+ D VAVK L D + F E +
Sbjct: 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 61
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-------------SYFLGWKE 558
+ H ++V+ +G C EG ++++EY++ L+K L + L +
Sbjct: 62 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQ 121
Query: 559 RFKVALGTAKGLAYLHHDEFEP----------------KIADFGLAKLSQRGSNSSQFSQ 602
+A A G+ YL F KI DFG++ R S+ + +
Sbjct: 122 MLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS----RDVYSTDYYR 177
Query: 603 IRGTK----GYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ G +M PE T + DV+S GVV+ E+
Sbjct: 178 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 215
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 3e-07
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 20/188 (10%)
Query: 468 EELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGE--EVFWAEVSTIGKIYHMNLVRMWG 524
E +GRG G V+ G L AD VAVK + + F E + + H N+VR+ G
Sbjct: 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 60
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYL------HHD- 576
C++ + ++ E V+ L + L KE ++ A G+ YL H D
Sbjct: 61 VCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDL 120
Query: 577 ---------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVY 627
+ KI+DFG+++ + G +S + + APE + +++ DV+
Sbjct: 121 AARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVW 180
Query: 628 SYGVVILE 635
S+G+++ E
Sbjct: 181 SFGILLWE 188
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 52.4 bits (125), Expect = 3e-07
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 455 SYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQ-GEEVFWAEVSTIG 512
S + KK F E++G+G SG VY + +A G+ VA++++ Q +E+ E+ +
Sbjct: 14 SVGDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR 72
Query: 513 KIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAY 572
+ + N+V G ++ EY+ SL + + + + V + L +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 573 LHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH ++ K+ DFG +Q S+ S + GT +MAPE +
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSTMVGTPYWMAPEVVT 189
Query: 617 NLPITAKVDVYSYGVVILEMVKG 639
KVD++S G++ +EM++G
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEG 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 3e-07
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 24/195 (12%)
Query: 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVR 521
S +F +ELG G G V+ G VA+K + + EE F E + K+ H LV+
Sbjct: 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQ 63
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF-- 578
++G C++ + ++ E++E L +L L + +G+ YL + F
Sbjct: 64 LYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIH 123
Query: 579 --------------EPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASNLPIT 621
K++DFG+ R +++ G K + PE + +
Sbjct: 124 RDLAARNCLVSSTGVVKVSDFGMT----RYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYS 179
Query: 622 AKVDVYSYGVVILEM 636
+K DV+S+GV++ E+
Sbjct: 180 SKSDVWSFGVLMWEV 194
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 4e-07
Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 44/217 (20%)
Query: 452 RRFSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRA----VAVKRLGDLHQGEEVFWA 506
R EL+K + LG G G V+KG+ + +G + VA+K + D G + F
Sbjct: 2 RILKETELRKL-----KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQD-RSGRQTFQE 55
Query: 507 ---EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKH-------LFSSYFLGW 556
+ +G + H +VR+ G C G L+ + SL H L L W
Sbjct: 56 ITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNW 114
Query: 557 KERFKVALGTAKGLAYLHH----------------DEFEPKIADFGLAKLSQRGSNSSQF 600
+ AKG+ YL + +IADFG+A L +
Sbjct: 115 ------CVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFY 168
Query: 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMV 637
S+ + +MA E T + DV+SYGV + EM+
Sbjct: 169 SEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMM 205
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 4e-07
Identities = 57/232 (24%), Positives = 87/232 (37%), Gaps = 63/232 (27%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD------GRAVAVKRL-GDLHQGE--------E 502
EL + + + LG G G V K VAVK L D + + E
Sbjct: 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEME 67
Query: 503 VFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV----------------EKQSLDK 546
+ IGK H N++ + G C++ ++ EY E S D
Sbjct: 68 MM----KMIGK--HKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDD 121
Query: 547 HLFSSYFLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKL 590
L K+ A A+G+ +L H D + KIADFGLA
Sbjct: 122 PRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLA-- 179
Query: 591 SQRGSNSSQFSQIRGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEMV 637
R + + + + T G +MAPE + T + DV+S+GV++ E+
Sbjct: 180 --RDIHHIDYYR-KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIF 228
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 4e-07
Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 57/227 (25%)
Query: 448 SSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV--- 503
S+ S +EL++ + +G G G VYK + GR A+K + H+ + V
Sbjct: 65 SAPSAAKSLSELERVNR-----IGSGAGGTVYKVIHRPTGRLYALKVIYGNHE-DTVRRQ 118
Query: 504 FWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--K 561
E+ + + H N+V+ ++ E+++ SL+ E+F
Sbjct: 119 ICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHI------ADEQFLAD 172
Query: 562 VALGTAKGLAYLH-----HDEFEP-----------KIADFGLAK-LSQRGS--NSSQFSQ 602
VA G+AYLH H + +P KIADFG+++ L+Q NSS
Sbjct: 173 VARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSV--- 229
Query: 603 IRGTKGYMAPEWASNLPITAKV----------DVYSYGVVILEMVKG 639
GT YM+PE I + D++S GV ILE G
Sbjct: 230 --GTIAYMSPE-----RINTDLNHGAYDGYAGDIWSLGVSILEFYLG 269
|
Length = 353 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 5e-07
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD---GRA---VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY+G D G A VAVK + + E F E S
Sbjct: 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 61
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS----------SYFLGWKER 559
+ ++VR+ G S+G+ L++ E + L +L S +E
Sbjct: 62 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 121
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ R + + +
Sbjct: 122 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT----RDIYETDYYR- 176
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +MAPE + T D++S+GVV+ E+
Sbjct: 177 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 214
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 5e-07
Identities = 55/211 (26%), Positives = 83/211 (39%), Gaps = 58/211 (27%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY---------HM 517
E+G G G VYK L GR VA+K++ + EE +ST+ +I H
Sbjct: 5 AEIGEGAYGTVYKARDLNTGRFVALKKV-RVPLSEEGI--PLSTLREIALLKQLESFEHP 61
Query: 518 NLVRMWGFC-----SEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF-KVALGTAK--- 568
N+VR+ C L++E+V+ Q L +L + K L
Sbjct: 62 NIVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYL---------SKCPKPGLPPETIKD 111
Query: 569 -------GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRG 605
G+ +LH H + +P KIADFGLA++ S + +
Sbjct: 112 LMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIY---SFEMALTSVVV 168
Query: 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
T Y APE VD++S G + E+
Sbjct: 169 TLWYRAPEVLLQSSYATPVDMWSVGCIFAEL 199
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 5e-07
Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 43/203 (21%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKR--LGDLHQGEEVF-WAEVSTIGKIYHMNLVRMW 523
++G G G VYK G VA+K+ L +G E+ + ++ H N++++
Sbjct: 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLL 64
Query: 524 GFCSEGRHRLLIYEYVE----------KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
L++E+++ ++ L + L SY +GLA+
Sbjct: 65 DVFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQ----------LLQGLAFC 114
Query: 574 H-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN 617
H H + +P K+ADFGLA+ GS ++ T+ Y APE
Sbjct: 115 HSHGILHRDLKPENLLINTEGVLKLADFGLARSF--GSPVRPYTHYVVTRWYRAPELLLG 172
Query: 618 LPI-TAKVDVYSYGVVILEMVKG 639
+ VD++S G + E++
Sbjct: 173 DKGYSTPVDIWSVGCIFAELLSR 195
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 5e-07
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 28/194 (14%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMWG 524
E +G+G G V+KG+ + V ++ DL + E E E++ + + + + +G
Sbjct: 10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 69
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL---GTAKGLAYLHHD----- 576
+G +I EY+ S L + F + F++A KGL YLH +
Sbjct: 70 SYLKGTKLWIIMEYLGGGSALDLLRAGPF----DEFQIATMLKEILKGLDYLHSEKKIHR 125
Query: 577 -----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVD 625
+ + K+ADFG+A Q + + GT +MAPE +K D
Sbjct: 126 DIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKAD 183
Query: 626 VYSYGVVILEMVKG 639
++S G+ +E+ KG
Sbjct: 184 IWSLGITAIELAKG 197
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 6e-07
Identities = 59/208 (28%), Positives = 83/208 (39%), Gaps = 50/208 (24%)
Query: 466 FKEELGRGGSGAV----YKGVLADGRAVAVKRLG-----DLHQGEEVFWAEVSTIGKIYH 516
F + LG G G V +KG G+ A+K L L Q E V E + I H
Sbjct: 5 FIKTLGTGSFGRVMLVRHKG---SGKYYALKILSKAKIVKLKQVEHVL-NEKRILQSIRH 60
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL-----FSSYFLGWKERF---KVALGTAK 568
LV ++G + + L+ EYV L HL F RF +V L
Sbjct: 61 PFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEP----VARFYAAQVVLA--- 113
Query: 569 GLAYLHHDEF-----EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
L YLH + +P KI DFG AK + + + + GT Y+AP
Sbjct: 114 -LEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYT-----LCGTPEYLAP 167
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGI 640
E + VD ++ G++I EM+ G
Sbjct: 168 EIILSKGYGKAVDWWALGILIYEMLAGY 195
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|238533 cd01100, APPLE_Factor_XI_like, Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 6e-07
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 292 FVGVPNTDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKS 343
F N DF G DL+ S E C C D C F+Y T CF KS
Sbjct: 6 FRQGSNVDFRGGDLSTVFASSAEQCQAACTADPGCLAFTY-NTKSKKCFLKS 56
|
PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. Length = 73 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 7e-07
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 49/208 (23%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRL--GDLHQGE-EVFWAEVSTIGKIYHMNLVRMW 523
E +G+G G V K +DG+ + K + G++ + E + +EV+ + ++ H N+VR +
Sbjct: 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYY 65
Query: 524 G---------------FCSEGRHRLLIYEYV-EKQSLDKHLFSSYFLGWKERFKVAL--- 564
+C G LI + E++ +++ W+ ++ L
Sbjct: 66 DRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFI------WRILTQLLLALY 119
Query: 565 ----GTAKGLAYLHHDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIR-GTKG 608
+ G LH D +P K+ DFGLAK+ + S F++ GT
Sbjct: 120 ECHNRSDPGNTVLHRD-LKPANIFLDANNNVKLGDFGLAKILG---HDSSFAKTYVGTPY 175
Query: 609 YMAPEWASNLPITAKVDVYSYGVVILEM 636
YM+PE +++ K D++S G +I E+
Sbjct: 176 YMSPEQLNHMSYDEKSDIWSLGCLIYEL 203
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 7e-07
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 469 ELGRGGSGAVYKGVL---ADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRM 522
ELG G G V KG+ + VAVK L + + + E + + ++ + +VRM
Sbjct: 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRM 61
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF---- 578
G C E +L+ E E L+K L + + K ++ + G+ YL F
Sbjct: 62 IGIC-EAESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRD 120
Query: 579 ------------EPKIADFGLAKLSQRGSNSSQFSQIRG---TKGYMAPEWASNLPITAK 623
KI+DFGL+K N + ++ G K Y APE + ++K
Sbjct: 121 LAARNVLLVTQHYAKISDFGLSKALGADENYYK-AKTHGKWPVKWY-APECMNYYKFSSK 178
Query: 624 VDVYSYGVVILE 635
DV+S+GV++ E
Sbjct: 179 SDVWSFGVLMWE 190
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 7e-07
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 34/196 (17%)
Query: 470 LGRGGSGAVYK-GVLADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWG 524
LG GG G V V + R A+K + H +E ++E + + H +V+++
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60
Query: 525 FCSEGRHRLLIYEYVEKQSL-----DKHLFSSYFLGWKERFKVALGTAKGLAYLHHD--- 576
+ ++ ++ EY L D+ LF Y RF +A YLH+
Sbjct: 61 TFKDKKYIYMLMEYCLGGELWTILRDRGLFDEY----TARFYIA-CVVLAFEYLHNRGII 115
Query: 577 --EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK 623
+ +P K+ DFG AK + G + F GT Y+APE N
Sbjct: 116 YRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFC---GTPEYVAPEIILNKGYDFS 172
Query: 624 VDVYSYGVVILEMVKG 639
VD +S G+++ E++ G
Sbjct: 173 VDYWSLGILLYELLTG 188
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 9e-07
Identities = 54/220 (24%), Positives = 87/220 (39%), Gaps = 56/220 (25%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL-GDLHQGEEV---FWAEVSTIGKIYHMNLVRMWG 524
+G+GG G VY R VA+K++ DL + + F E + H +V ++
Sbjct: 10 IGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYS 69
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFK--VALGTA------------KG 569
CS+G Y+E +L K L S W KE +A T+
Sbjct: 70 ICSDGDPVYYTMPYIEGYTL-KSLLKSV---WQKESLSKELAEKTSVGAFLSIFHKICAT 125
Query: 570 LAYLH-----HDEFEPK-----------IADFGLA-------------KLSQRGSNSSQF 600
+ Y+H H + +P I D+G A + +R S
Sbjct: 126 IEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSM 185
Query: 601 S---QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ +I GT YMAPE +P + D+Y+ GV++ +M+
Sbjct: 186 TIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQML 225
|
Length = 932 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 1e-06
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 460 KKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQ-GEEVFWAEVSTIGKIYHM 517
KK T+ E++G+G SG VY + +A G+ VA+K++ Q +E+ E+ + + H
Sbjct: 19 KKYTRF--EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHP 76
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH--- 574
N+V G ++ EY+ SL + + + + V + L +LH
Sbjct: 77 NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 135
Query: 575 --HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
H + + K+ DFG +Q S+ S + GT +MAPE +
Sbjct: 136 VIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 193
Query: 622 AKVDVYSYGVVILEMVKG 639
KVD++S G++ +EMV+G
Sbjct: 194 PKVDIWSLGIMAIEMVEG 211
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 55/218 (25%), Positives = 90/218 (41%), Gaps = 54/218 (24%)
Query: 469 ELGRGGSGAVYK----GVLA--DGRAVAVKRLGD--LHQGEEVFWAEVSTIGKIYHMNLV 520
++G+G G V++ G+L VAVK L + + F E + + + H N+V
Sbjct: 12 DIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIV 71
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHL--FSSYF--------------------LGWKE 558
++ G C+ G+ L++EY+ L++ L S L E
Sbjct: 72 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTE 131
Query: 559 RFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAK----LSQRGSNSS 598
+ +A A G+AYL H D KIADFGL++ ++ +
Sbjct: 132 QLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASEN 191
Query: 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
IR +M PE T + DV++YGVV+ E+
Sbjct: 192 DAIPIR----WMPPESIFYNRYTTESDVWAYGVVLWEI 225
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 1e-06
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 52/225 (23%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL-----ADGRAVAVKRLGDLHQGEE--VFWAEVST 510
EL S F EELG G +YKG L + VA+K L D++ ++ F E S
Sbjct: 1 ELPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASL 60
Query: 511 IGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF-------------------SS 551
+ +++H N+V + G ++ + +++EY+ + L + L SS
Sbjct: 61 MAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSS 120
Query: 552 YFLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGS 595
L + +A+ A G+ YL H D + KI+D GL+ R
Sbjct: 121 --LDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLS----REI 174
Query: 596 NSSQFSQIRGTK----GYMAPEWASNLPITAKVDVYSYGVVILEM 636
S+ + +++ +M PE ++ D++S+GVV+ E+
Sbjct: 175 YSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEI 219
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 1e-06
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 43/207 (20%)
Query: 470 LGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGE----------EVFWAEVSTIGKIYHMN 518
+G G G+VY G+ A G +AVK++ + E++ + ++ H N
Sbjct: 8 IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67
Query: 519 LVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL------GTAKGLAY 572
+V+ G + H + EYV S+ L ++Y F+ L KGL Y
Sbjct: 68 IVQYLGSSLDADHLNIFLEYVPGGSV-AALLNNY-----GAFEETLVRNFVRQILKGLNY 121
Query: 573 LH-----HDEFEP-----------KIADFGLAKL----SQRGSNSSQFSQIRGTKGYMAP 612
LH H + + KI+DFG++K S + ++G+ +MAP
Sbjct: 122 LHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAP 181
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKG 639
E T K D++S G +++EM+ G
Sbjct: 182 EVVKQTSYTRKADIWSLGCLVVEMLTG 208
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 2e-06
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 41/205 (20%)
Query: 470 LGRGGSGAVYKGVLA--DGRA--VAVKRLG-DLHQGEEV--FWAEVSTIGKIYHMNLVRM 522
LG G G+V +G L+ DG VAVK + D+H E+ F +E + + H N++++
Sbjct: 7 LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66
Query: 523 WGFCSEGRHR------LLIYEYVEKQSLDKHLFSSYFLGWKERF------KVALGTAKGL 570
G C E ++I +++ L L S G E+ K + A G+
Sbjct: 67 IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126
Query: 571 AYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMA 611
YL H D + +ADFGL S++ + + Q R K ++A
Sbjct: 127 EYLSNRNFIHRDLAARNCMLREDMTVCVADFGL---SKKIYSGDYYRQGRIAKMPVKWIA 183
Query: 612 PEWASNLPITAKVDVYSYGVVILEM 636
E ++ T+K DV+++GV + E+
Sbjct: 184 IESLADRVYTSKSDVWAFGVTMWEI 208
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 2e-06
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 205 RLTMDYDGNLRLYSLNKVTGSWMISWQALMQPGKVHGVCGKNGICVYTPEPKCSCPPGYE 264
RLT+ +G+L ++ + W + W A V+G CG G C PKC+C G+
Sbjct: 48 RLTLSSEGSLERFTWIPNSQDWNLFWSAPKDQCDVYGRCGPYGYCDVNTSPKCNCIKGFV 107
|
In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. Length = 110 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 3e-06
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 31/195 (15%)
Query: 466 FKEELGRGGSGAVYKG-VLADGRAVAVK--RLGDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
++E LG G G VYK L R +AVK L + ++ +E+ + K ++
Sbjct: 5 YQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGF 64
Query: 523 WG-FCSEGRHRLLIYEYVEKQSLDKH-LFSSYFLGWKERFKVALGTAKGLAYLH-----H 575
+G F E R + E+++ SLD + + LG ++A+ KGL YL H
Sbjct: 65 YGAFFVENRISICT-EFMDGGSLDVYRKIPEHVLG-----RIAVAVVKGLTYLWSLKILH 118
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P K+ DFG+ S + NS + + GT YMAPE S
Sbjct: 119 RDVKPSNMLVNTRGQVKLCDFGV---STQLVNSIAKTYV-GTNAYMAPERISGEQYGIHS 174
Query: 625 DVYSYGVVILEMVKG 639
DV+S G+ +E+ G
Sbjct: 175 DVWSLGISFMELALG 189
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 3e-06
Identities = 53/217 (24%), Positives = 87/217 (40%), Gaps = 61/217 (28%)
Query: 470 LGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWA--EVSTIGKIYHMNLVRMWGFC 526
LG G +G V+ V +D + VAVK++ L + V A E+ I ++ H N+V+++
Sbjct: 13 LGCGSNGLVFSAVDSDCDKRVAVKKIV-LTDPQSVKHALREIKIIRRLDHDNIVKVYEVL 71
Query: 527 SEGRHRL--------------LIYEYVE---------KQSLDKH--LFSSYFLGWKERFK 561
L ++ EY+E ++H LF L
Sbjct: 72 GPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLL------- 124
Query: 562 VALGTAKGLAYLH-----HDEFEP------------KIADFGLAK-LSQRGSNSSQFSQI 603
+GL Y+H H + +P KI DFGLA+ + S+ S+
Sbjct: 125 ------RGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEG 178
Query: 604 RGTKGYMAPEWA-SNLPITAKVDVYSYGVVILEMVKG 639
TK Y +P S T +D+++ G + EM+ G
Sbjct: 179 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 215
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 3e-06
Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 470 LGRGGSGAVYKGVLAD--GRA----VAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVR 521
LG G G V K GRA VAVK L + E+ +E + + ++ H ++++
Sbjct: 8 LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHL-----------------FSSYFLGWKER----- 559
++G CS+ LLI EY + SL L SSY ER
Sbjct: 68 LYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMG 127
Query: 560 --FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFS 601
A ++G+ YL H D + KI+DFGL++ + + S
Sbjct: 128 DLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRS 187
Query: 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ R +MA E + T + DV+S+GV++ E+V
Sbjct: 188 KGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 223
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 3e-06
Identities = 32/114 (28%), Positives = 43/114 (37%), Gaps = 29/114 (25%)
Query: 552 YFLGWKERFKVALGTAK--------GLAYLH-----HDEFEP-----------KIADFGL 587
Y L K +F K L YLH H + +P I DF +
Sbjct: 89 YHLSQKVKFSEE--QVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNI 146
Query: 588 AKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIR 641
A + ++ S GT GYMAPE + VD +S GV E ++G R
Sbjct: 147 ATKVTPDTLTTSTS---GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKR 197
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 3e-06
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 24/192 (12%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMWG 524
E +G+G G VYKG+ + V ++ DL + E E E++ + + + R +G
Sbjct: 10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYG 69
Query: 525 FCSEGRHRLLIYEYVEKQS-LDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD------- 576
+G +I EY+ S LD L L + KGL YLH +
Sbjct: 70 SYLKGTKLWIIMEYLGGGSALD--LLKPGPLEETYIATILREILKGLDYLHSERKIHRDI 127
Query: 577 ---------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVY 627
+ + K+ADFG+A Q + + GT +MAPE K D++
Sbjct: 128 KAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIW 185
Query: 628 SYGVVILEMVKG 639
S G+ +E+ KG
Sbjct: 186 SLGITAIELAKG 197
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 4e-06
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 28/194 (14%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+VR+
Sbjct: 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLL 64
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E+++ L K++ SS G +G+AY H H
Sbjct: 65 DVVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHR 123
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE--WASNLPITAK 623
+ +P K+ADFGLA+ G ++ T Y APE S T
Sbjct: 124 DLKPQNLLIDREGALKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGSRQYSTP- 180
Query: 624 VDVYSYGVVILEMV 637
VD++S G + EMV
Sbjct: 181 VDIWSIGCIFAEMV 194
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 4e-06
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 38/207 (18%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + +++LG G G V+ VAVK + E F AE + + + H
Sbjct: 2 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 61
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL--------GTAKG 569
LV++ ++ +I E++ K SL FL E K L A+G
Sbjct: 62 KLVKLHAVVTK-EPIYIITEFMAKGSLLD------FLKSDEGSKQPLPKLIDFSAQIAEG 114
Query: 570 LA------YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYM 610
+A Y+H D KIADFGLA++ + ++++ G K +
Sbjct: 115 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE----DNEYTAREGAKFPIKWT 170
Query: 611 APEWASNLPITAKVDVYSYGVVILEMV 637
APE + T K DV+S+G++++E+V
Sbjct: 171 APEAINFGSFTIKSDVWSFGILLMEIV 197
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 4e-06
Identities = 62/206 (30%), Positives = 88/206 (42%), Gaps = 27/206 (13%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGV---LADGRA---VAVKRL-GDLHQGE-EVFWAEVS 509
E ++ SF + LG G G V + L+ A VAVK L H E E +E+
Sbjct: 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELK 90
Query: 510 TIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGT 566
+ + H N+V + G C+ G L+I EY L L FL ++ +
Sbjct: 91 IMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQV 150
Query: 567 AKGLAYL------HHDEFE----------PKIADFGLAKLSQRGSNSSQFSQIRGTKGYM 610
AKG+A+L H D KI DFGLA+ SN R +M
Sbjct: 151 AKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWM 210
Query: 611 APEWASNLPITAKVDVYSYGVVILEM 636
APE N T + DV+SYG+++ E+
Sbjct: 211 APESIFNCVYTFESDVWSYGILLWEI 236
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 5e-06
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 37/202 (18%)
Query: 470 LGRGGSGAVYKGVLADG----RAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVRMW 523
+G+G G VY G L D AVK L + EEV F E + H N++ +
Sbjct: 3 IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62
Query: 524 GFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL------H 574
G C SEG L++ Y++ L + S ++ K+ L AKG+ YL H
Sbjct: 63 GICLPSEGS-PLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVH 121
Query: 575 HD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEWASNL 618
D F K+ADFGLA R ++ + G +MA E
Sbjct: 122 RDLAARNCMLDESFTVKVADFGLA----RDIYDKEYYSVHNHTGAKLPVKWMALESLQTQ 177
Query: 619 PITAKVDVYSYGVVILE-MVKG 639
T K DV+S+GV++ E M +G
Sbjct: 178 KFTTKSDVWSFGVLLWELMTRG 199
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 6e-06
Identities = 52/219 (23%), Positives = 86/219 (39%), Gaps = 45/219 (20%)
Query: 454 FSYAELKKSTKSFKEELGRGGSGAVYKG-----VLADGRA-VAVKRLG--DLHQGEEVFW 505
F + L++ T LGRG G V+ G V VK L + F
Sbjct: 2 FPRSNLQEIT-----TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFR 56
Query: 506 AEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL---------FSSYFLGW 556
E+ K+ H N+VR+ G C E +I EY + L + L L
Sbjct: 57 RELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLST 116
Query: 557 KERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQF 600
K++ + A G+ +L H D + E K++ L+K +S++
Sbjct: 117 KQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSK----DVYNSEY 172
Query: 601 SQIRGTKG---YMAPEWASNLPITAKVDVYSYGVVILEM 636
++R ++APE + K DV+S+GV++ E+
Sbjct: 173 YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEV 211
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 7e-06
Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 29/195 (14%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEE----VFWAEVSTIGKIYHMNLVRM 522
E++G G G VYK +A+K++ L Q +E E+S + ++ H N+VR+
Sbjct: 8 EKIGEGTYGVVYKARDRVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF-KVAL-GTAKGLAYLH-----H 575
+ L++EY++ L KH+ SS R K L +G+AY H H
Sbjct: 67 QDVVHSEKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLH 125
Query: 576 DEFEP------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITA 622
+ +P K+ADFGLA+ G F+ T Y APE + +
Sbjct: 126 RDLKPQNLLIDRRTNALKLADFGLAR--AFGIPVRTFTHEVVTLWYRAPEILLGSRHYST 183
Query: 623 KVDVYSYGVVILEMV 637
VD++S G + EMV
Sbjct: 184 PVDIWSVGCIFAEMV 198
|
Length = 294 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 8e-06
Identities = 60/225 (26%), Positives = 93/225 (41%), Gaps = 52/225 (23%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL---ADG---RAVAVKRLGDLHQG--EEVFWAEVS 509
E+ ST F EELG G VYKG L A G +AVA+K L D +G E F E
Sbjct: 1 EINLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAM 60
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL------------------DKHLFSS 551
++ H N+V + G ++ + +I+ Y L DK + S+
Sbjct: 61 MRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKST 120
Query: 552 YFLGWKERFKVALGTAKGLAYL--HH--------------DEFEPKIADFGLAKLSQRGS 595
L + + A G+ +L HH D+ KI+D GL R
Sbjct: 121 --LEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLF----REV 174
Query: 596 NSSQFSQIRGTK----GYMAPEWASNLPITAKVDVYSYGVVILEM 636
++ + ++ G +M+PE + D++SYGVV+ E+
Sbjct: 175 YAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEV 219
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 47.8 bits (113), Expect = 8e-06
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMWG 524
E++G+G G V+KG+ + V ++ DL + E E E++ + + + + +G
Sbjct: 10 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 69
Query: 525 FCSEGRHRLLIYEYVEKQS-LDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----- 578
+ +I EY+ S LD L L + + KGL YLH ++
Sbjct: 70 SYLKDTKLWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDI 127
Query: 579 -----------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVY 627
E K+ADFG+A Q + + GT +MAPE +K D++
Sbjct: 128 KAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIW 185
Query: 628 SYGVVILEMVKG 639
S G+ +E+ KG
Sbjct: 186 SLGITAIELAKG 197
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 1e-05
Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 51/225 (22%)
Query: 456 YAELKKSTKSFKEELGRGGSGAVYKG-VLADGRAV--AVKRLGDLHQGEEV--FWAEVST 510
Y L+ + F++ +G G G V K + DG + A+KR+ + ++ F E+
Sbjct: 1 YPVLEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 60
Query: 511 IGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTA-- 567
+ K+ +H N++ + G C + L EY +L L S L F +A TA
Sbjct: 61 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 120
Query: 568 --------------KGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNS 597
+G+ YL H D + KIADFGL++
Sbjct: 121 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR-------- 172
Query: 598 SQFSQIRGTKGYMAPEWAS----NLPI-TAKVDVYSYGVVILEMV 637
Q ++ T G + W + N + T DV+SYGV++ E+V
Sbjct: 173 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 217
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 38/195 (19%), Positives = 66/195 (33%), Gaps = 46/195 (23%)
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL-------DKHLFSSYFLGWKER 559
E+ + + H N++ + + L+ EY +L LF + W
Sbjct: 49 EIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLW--- 105
Query: 560 FKVALGTAKGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQI 603
++Y+H H + + K+ DFG++K GS S +
Sbjct: 106 --YLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISK--ILGSEYSMAETV 161
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM---------------VKGIRLSNWVVE 648
GT YM+PE + K D+++ G V+ E+ V I N+
Sbjct: 162 VGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPV 221
Query: 649 DGEGQEAELKRFVRE 663
+EL V
Sbjct: 222 VS-VYSSELISLVHS 235
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 1e-05
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KIADFG+ K + G + S GT Y+APE VD +S+GV++ EM+ G
Sbjct: 136 KIADFGMCKENMNGEGKA--STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIG 192
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 47.8 bits (113), Expect = 1e-05
Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 39/210 (18%)
Query: 459 LKKSTKSFKEELGRGGSGAVYKGV-LADGRAV----AVKRLGDLH--QGEEVFWAEVSTI 511
LK++ + LG G G VYKG+ + +G V A+K L + + F E +
Sbjct: 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 63
Query: 512 GKIYHMNLVRMWGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVA 563
+ H +LVR+ G C +L+ + +YV + ++ S L W
Sbjct: 64 ASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLDYVHEHK--DNIGSQLLLNW------C 115
Query: 564 LGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK 607
+ AKG+ YL H D KI DFGLA+L + +
Sbjct: 116 VQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI 175
Query: 608 GYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+MA E T + DV+SYGV I E++
Sbjct: 176 KWMALECIHYRKFTHQSDVWSYGVTIWELM 205
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 59/199 (29%), Positives = 81/199 (40%), Gaps = 38/199 (19%)
Query: 470 LGRGGSGAV----YKGVLADGRAVAVKRL--GDLHQGEEVFWAEV-----STIGKIYHMN 518
LG+G G V KG AVK L + Q ++V + GK H
Sbjct: 3 LGKGSFGKVLLAELKGT---DELYAVKVLKKDVILQDDDVECTMTEKRVLALAGK--HPF 57
Query: 519 LVRMWGFCSEGRHRL-LIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLH-H 575
L ++ C + + RL + EYV L H+ S F + RF A GL +LH
Sbjct: 58 LTQLHS-CFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARF-YAAEIVLGLQFLHER 115
Query: 576 D---------------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPI 620
E KIADFG+ K G ++ S GT Y+APE S P
Sbjct: 116 GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTT--STFCGTPDYIAPEILSYQPY 173
Query: 621 TAKVDVYSYGVVILEMVKG 639
VD ++ GV++ EM+ G
Sbjct: 174 GPAVDWWALGVLLYEMLAG 192
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (112), Expect = 2e-05
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 30/197 (15%)
Query: 468 EELGRGGSGAVYKG-VLADGRAVAVKRLGDLHQGEEVFWA--EVSTIGKIYHMNLVRMWG 524
E+LG G VYKG +G+ VA+K + + F A E S + + H N+V +
Sbjct: 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHD 70
Query: 525 FCSEGRHRLLIYEYVEK---QSLDKHLFSSYFLGWKERFKVAL-GTAKGLAYLH-----H 575
L++EYV Q +DKH + E K+ L +GL+Y+H H
Sbjct: 71 IIHTKETLTLVFEYVHTDLCQYMDKHPGGLH----PENVKLFLFQLLRGLSYIHQRYILH 126
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAK 623
+ +P K+ADFGLA+ + S +S T Y P+ + +
Sbjct: 127 RDLKPQNLLISDTGELKLADFGLAR--AKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTC 184
Query: 624 VDVYSYGVVILEMVKGI 640
+D++ G + +EM++G+
Sbjct: 185 LDMWGVGCIFVEMIQGV 201
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 2e-05
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 41/204 (20%)
Query: 469 ELGRGGSGAVYKG--VLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY---------HM 517
E+G G G V+K + GR VA+KR+ + GEE +STI ++ H
Sbjct: 8 EIGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGM--PLSTIREVAVLRHLETFEHP 64
Query: 518 NLVRMWGFCSEGR-----HRLLIYEYVEKQSLDKHLFSSYFLGW-KERFK-VALGTAKGL 570
N+VR++ C+ R L++E+V+ Q L +L G E K + +GL
Sbjct: 65 NVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 123
Query: 571 AYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW 614
+LH H + +P K+ADFGLA++ S + + T Y APE
Sbjct: 124 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPEV 180
Query: 615 ASNLPITAKVDVYSYGVVILEMVK 638
VD++S G + EM +
Sbjct: 181 LLQSSYATPVDLWSVGCIFAEMFR 204
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 2e-05
Identities = 49/212 (23%), Positives = 85/212 (40%), Gaps = 58/212 (27%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVF----WAEVSTIGKIYHMNLVRM 522
++G G G VYK G VA+K++ + +E F E+ + K+ H N+VR+
Sbjct: 5 AQIGEGTYGQVYKARNKKTGELVALKKI-RMENEKEGFPITAIREIKLLQKLRHPNIVRL 63
Query: 523 WGFC-SEGRHRL-LIYEYVE------------KQSLD--KHLFSSYFLGWKERFKVALGT 566
S+G+ + +++EY++ K + K
Sbjct: 64 KEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLL------------- 110
Query: 567 AKGLAYLHH----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYM 610
+GL YLH ++ K+ADFGLA+ NS+ ++ T Y
Sbjct: 111 -EGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLAR-PYTKRNSADYTNRVITLWYR 168
Query: 611 APEW---ASNLPITAKVDVYSYGVVILEMVKG 639
PE A+ +VD++S G ++ E+ G
Sbjct: 169 PPELLLGATRY--GPEVDMWSVGCILAELFLG 198
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 2e-05
Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 55/216 (25%)
Query: 467 KEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWG 524
E +G G G VYK G+ VA+K + + EE E + + K H N+ +G
Sbjct: 11 VEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYG 70
Query: 525 FCSEGRHRL------LIYEYVE--------------KQSLDKHLFSSYFLGWKERFKVAL 564
+ L+ E + L + + Y L +E
Sbjct: 71 AFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIA-YIL--RE------ 121
Query: 565 GTAKGLAYLH-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG 608
T +GLAYLH H E K+ DFG++ + + + I GT
Sbjct: 122 -TLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDS-TLGRRNTFI-GTPY 178
Query: 609 YMAPEWAS-----NLPITAKVDVYSYGVVILEMVKG 639
+MAPE + + A+ DV+S G+ +E+ G
Sbjct: 179 WMAPEVIACDEQPDASYDARSDVWSLGITAIELADG 214
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 3e-05
Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 23/158 (14%)
Query: 499 QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKH-------LFSS 551
+ +E EV + K+ H N+V + E ++ EY + L K LFS
Sbjct: 41 KEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSE 100
Query: 552 -YFLGWKERFKVALGTAKGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQ 599
L W + + L LH D K+ DFG+A+ ++S +
Sbjct: 101 DQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQL---NDSME 157
Query: 600 FSQI-RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ GT Y++PE N P K D++S G V+ E+
Sbjct: 158 LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYEL 195
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 4e-05
Identities = 73/317 (23%), Positives = 118/317 (37%), Gaps = 73/317 (23%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY----KGVLA---------DGRA--VAVKRL-GDLHQ-G 500
E + KE+LG G G V+ +G+ DG+ VAVK L D+ +
Sbjct: 1 EFPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTA 60
Query: 501 EEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL----FSSYF--- 553
F E+ + ++ + N++R+ G C +I EY+E L++ L S F
Sbjct: 61 RNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHA 120
Query: 554 -----LGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQ 592
+ +A+ A G+ YL H D + KIADFG++
Sbjct: 121 NNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMS---- 176
Query: 593 RGSNSSQFSQIRGTK----GYMAPEWASNL--PITAKVDVYSYGVVILEMVKGIRLSNWV 646
R S + +I+G +MA W S L T DV+++GV + EM + +
Sbjct: 177 RNLYSGDYYRIQGRAVLPIRWMA--WESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYS 234
Query: 647 VEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDE 706
+ E F R R+I + P + + + C
Sbjct: 235 LLSDEQVIENTGEFFRNQGRQIYLSQT--------PLCPS--------PVFKLMMRCWSR 278
Query: 707 DRSKRPTMDSVVQSLLE 723
D RPT + + L E
Sbjct: 279 DIKDRPTFNKIHHFLRE 295
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 4e-05
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 60/225 (26%)
Query: 465 SFKEELGRGGSGAVY------------KGVLADGRA-----VAVKRL---GDLHQGEEVF 504
+F E+LG G G V+ K + A VAVK L + E+ F
Sbjct: 8 NFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNARED-F 66
Query: 505 WAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE----KQSLDKHLFSSYFLGWKERF 560
EV + ++ N+ R+ G C+ +I EY+E Q L KH+ + L +
Sbjct: 67 LKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKS 126
Query: 561 -------KVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNS 597
+A A G+ YL H D + KIADFG++ R S
Sbjct: 127 LSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMS----RNLYS 182
Query: 598 SQFSQIRGTKGYMAP----EWASNL--PITAKVDVYSYGVVILEM 636
S + +++G P W S L T K DV+++GV + E+
Sbjct: 183 SDYYRVQGRA--PLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEI 225
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 4e-05
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 292 FVGVPNTDFYGFDLNYSQTVSKEACMKLCLD-DCRCSGFSYRLTGQGLC--FTKSVLFNG 348
FV +PNT GF S E C CL+ +C C F+Y +G C +++S L +
Sbjct: 6 FVRLPNTKLPGFSRIVISVASLEECASKCLNSNCSCRSFTYNNGTKG-CLLWSESSLGDA 64
Query: 349 FKAPNFPGIIYLKL 362
P+ +Y K+
Sbjct: 65 RLFPSGGVDLYEKI 78
|
Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions. Length = 78 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 5e-05
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 17/120 (14%)
Query: 468 EELGRGGSGAVYKGVL-----ADGRA------VAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E LG+G +YKGVL D V +K LG H+ F+ S + ++ H
Sbjct: 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSH 60
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS---SYFLGWKERFKVALGTAKGLAYL 573
+LV+++G C + +++ EYV+ LD L + L WK VA A L YL
Sbjct: 61 KHLVKLYGVCVRDEN-IMVEEYVKFGPLDVFLHREKNNVSLHWK--LDVAKQLASALHYL 117
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 6e-05
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KIADFG+ K + G N + S GT Y+APE L T VD +S+GV++ EM+ G
Sbjct: 136 KIADFGMCKENVFGDNRA--STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIG 192
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 7e-05
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 49/132 (37%)
Query: 531 HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP----- 580
HRLL +EKQ F YFL +++ +GL Y+H H + +P
Sbjct: 97 HRLLTSRPLEKQ------FIQYFL-----YQIL----RGLKYVHSAGVVHRDLKPSNILI 141
Query: 581 ------KIADFGLAKLSQRGSNSSQFSQIRG---TKGYMAPE----WASNLPITAKVDVY 627
KI DFGLA++ Q Q+ G T+ Y APE W +VD++
Sbjct: 142 NENCDLKICDFGLARI--------QDPQMTGYVSTRYYRAPEIMLTWQK---YDVEVDIW 190
Query: 628 SYGVVILEMVKG 639
S G + EM++G
Sbjct: 191 SAGCIFAEMLEG 202
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 7e-05
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 34/199 (17%)
Query: 469 ELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVRMW-GF 525
ELG G G VYK + A ++ + EE+ F E+ + + H N+V ++ +
Sbjct: 12 ELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAY 71
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKE---RFKVALGTAKGLAYLHHD------ 576
E + +LI E+ + +LD + G E R+ V + L +LH
Sbjct: 72 FYENKLWILI-EFCDGGALDS-IMLELERGLTEPQIRY-VCRQMLEALNFLHSHKVIHRD 128
Query: 577 ----------EFEPKIADFGL-AKLSQRGSNSSQFSQIRGTKGYMAPEWA-----SNLPI 620
+ + K+ADFG+ AK F GT +MAPE + P
Sbjct: 129 LKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFI---GTPYWMAPEVVACETFKDNPY 185
Query: 621 TAKVDVYSYGVVILEMVKG 639
K D++S G+ ++E+ +
Sbjct: 186 DYKADIWSLGITLIELAQM 204
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 7e-05
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 55/207 (26%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRL-GDLHQGEE-VFWAEVSTIGKI-YHMNLVRMW 523
++LG G G+VY G VA+K++ + EE + EV ++ K+ H N+V++
Sbjct: 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLK 64
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALG----------TAKGLAYL 573
E ++EY ++ +L+ K+R +GLA++
Sbjct: 65 EVFRENDELYFVFEY-----MEGNLYQLM----KDRKGKPFSESVIRSIIYQILQGLAHI 115
Query: 574 H-----HDEFEP-----------KIADFGLAKLSQRGSNSSQ-FSQIRGTKGYMAPE--- 613
H H + +P KIADFGLA R S ++ T+ Y APE
Sbjct: 116 HKHGFFHRDLKPENLLVSGPEVVKIADFGLA----REIRSRPPYTDYVSTRWYRAPEILL 171
Query: 614 ---WASNLPITAKVDVYSYGVVILEMV 637
S + VD+++ G ++ E+
Sbjct: 172 RSTSYS-----SPVDIWALGCIMAELY 193
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 8e-05
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 28/204 (13%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
ELK ELG G G V K + ++L L + + + ++
Sbjct: 1 ELKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 60
Query: 518 N---LVRMWG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
N +V +G F S+G + + E+++ SLD+ L + + + KV++ +GLAYL
Sbjct: 61 NSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYL 119
Query: 574 H------HDEFEP-----------KIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWA 615
H + +P K+ DFG++ +L +NS GT+ YM+PE
Sbjct: 120 REKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERL 174
Query: 616 SNLPITAKVDVYSYGVVILEMVKG 639
+ + D++S G+ ++E+ G
Sbjct: 175 QGTHYSVQSDIWSMGLSLVELAIG 198
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 8e-05
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 42/206 (20%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLG-DLHQGE-EVFWAEVSTIGKIYHMNLVRMWG 524
E+LG G VYKG G VA+K + D +G E+S + ++ H N+VR+
Sbjct: 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHD 65
Query: 525 FCSEGRHRLLIYEYVE---KQSLDKHLFSSYFLGWKERFKVALGTAK--------GLAYL 573
+L++EY++ K+ +D H R + T K G+A+
Sbjct: 66 VIHTENKLMLVFEYMDKDLKKYMDTH---------GVRGALDPNTVKSFTYQLLKGIAFC 116
Query: 574 H-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WAS 616
H H + +P K+ADFGLA+ G + FS T Y AP+
Sbjct: 117 HENRVLHRDLKPQNLLINKRGELKLADFGLAR--AFGIPVNTFSNEVVTLWYRAPDVLLG 174
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
+ + +D++S G ++ EM+ G L
Sbjct: 175 SRTYSTSIDIWSVGCIMAEMITGRPL 200
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 1e-04
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 53/227 (23%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADG-----------RAVAVKRLGDLHQGEEV--F 504
EL ++ + + LG G G V V+A+ VAVK L D +++
Sbjct: 8 ELSRTRLTLGKPLGEGCFGQV---VMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDL 64
Query: 505 WAEVST---IGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL------------- 548
+E+ IGK H N++ + G C++ ++ EY K +L ++L
Sbjct: 65 VSEMEMMKMIGK--HKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFD 122
Query: 549 ---FSSYFLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAK 589
L +K+ A A+G+ YL H D + KIADFGLA+
Sbjct: 123 TCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLAR 182
Query: 590 LSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 183 DVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEI 229
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 1e-04
Identities = 54/194 (27%), Positives = 80/194 (41%), Gaps = 30/194 (15%)
Query: 469 ELGRGGSGAVYKGVLA-DGRAVAVKRLG----DLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
E+G G GAVY + VAVK++ ++ + EV + ++ H N +
Sbjct: 28 EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYK 87
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G + L+ EY + D L E + G +GLAYLH H +
Sbjct: 88 GCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDI 147
Query: 579 --------EP---KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL---PITAKV 624
EP K+ADFG A S SS + GT +MAPE + KV
Sbjct: 148 KAGNILLTEPGQVKLADFGSA------SKSSPANSFVGTPYWMAPEVILAMDEGQYDGKV 201
Query: 625 DVYSYGVVILEMVK 638
DV+S G+ +E+ +
Sbjct: 202 DVWSLGITCIELAE 215
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|128519 smart00223, APPLE, APPLE domain | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 1e-04
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 296 PNTDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSY 331
N DF G D+N S + C K C RC F++
Sbjct: 7 KNVDFRGSDINTVYVPSAQVCQKRCTSHPRCLFFTF 42
|
Four-fold repeat in plasma kallikrein and coagulation factor XI. Factor XI apple 3 mediates binding to platelets. Factor XI apple 1 binds high-molecular-mass kininogen. Apple 4 in factor XI mediates dimer formation and binds to factor XIIa. Mutations in apple 4 cause factor XI deficiency, an inherited bleeding disorder. Length = 79 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 28/195 (14%)
Query: 469 ELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVRMW-GF 525
ELG G G VYK + +A ++ D EE+ + E+ + H N+V++ F
Sbjct: 12 ELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 71
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALG-TAKGLAYLHHDEF------ 578
E +LI E+ ++D + + + +V T + L YLH ++
Sbjct: 72 YYENNLWILI-EFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLK 130
Query: 579 ----------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-----WASNLPITAK 623
+ K+ADFG++ + R + GT +MAPE + + P K
Sbjct: 131 AGNILFTLDGDIKLADFGVSAKNTR--TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 188
Query: 624 VDVYSYGVVILEMVK 638
DV+S G+ ++EM +
Sbjct: 189 ADVWSLGITLIEMAQ 203
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 1e-04
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KIADFG+ K + G +++ GT Y+APE + P VD +++GV++ EM+ G
Sbjct: 141 KIADFGMCKENIFGGKTTR--TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 197
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 64/233 (27%), Positives = 100/233 (42%), Gaps = 43/233 (18%)
Query: 470 LGRGGSGAVYK-GVLADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWG 524
LG+GG G V V A G+ A KRL +GE + E + K+ +V +
Sbjct: 8 LGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNL-A 66
Query: 525 FCSEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKERFKV--ALGTAKGLAYLHHD----- 576
+ E + L L+ + L H+++ G++E + A GL LH +
Sbjct: 67 YAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYR 126
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRG---TKGYMAPEWASNLPITA 622
+ +P +I+D GLA G + IRG T GYMAPE +N T
Sbjct: 127 DLKPENILLDDYGHIRISDLGLAVKIPEGES------IRGRVGTVGYMAPEVLNNQRYTL 180
Query: 623 KVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675
D + G +I EM++G G++ ++KR EV R++L EE +
Sbjct: 181 SPDYWGLGCLIYEMIEG-------QSPFRGRKEKVKR--EEVDRRVLETEEVY 224
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 5/81 (6%)
Query: 562 VALGTAKGLAYLHHDEFEPKI--ADFGLAKLSQRGSNSSQF-SQIRGTKGYMAPEWASNL 618
V L L LH I GL KL GS + + Q R +MAPE
Sbjct: 22 VCLQCLGALRELHRQAKSGNILLTWDGLLKLD--GSVAFKTPEQSRPDPYFMAPEVIQGQ 79
Query: 619 PITAKVDVYSYGVVILEMVKG 639
T K D+YS G+ + E +
Sbjct: 80 SYTEKADIYSLGITLYEALDY 100
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 2e-04
Identities = 51/218 (23%), Positives = 83/218 (38%), Gaps = 48/218 (22%)
Query: 466 FKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEE-----VFWAEVSTIGKI-YHMN 518
F + +G G V + A+K L +E V E + ++ H
Sbjct: 5 FGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVK-IEKEVLTRLNGHPG 63
Query: 519 LVRMWG-FCSEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKE-RFKVALGTAKGLAYLH- 574
+++++ F E L + EY L +++ L K RF A L YLH
Sbjct: 64 IIKLYYTFQDE--ENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAE-ILLALEYLHS 120
Query: 575 ----HDEFEP-----------KIADFGLAKL--------SQRGSNSSQFSQIR------- 604
H + +P KI DFG AK+ S +G ++ SQI
Sbjct: 121 KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFA 180
Query: 605 ---GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
GT Y++PE + P D+++ G +I +M+ G
Sbjct: 181 SFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTG 218
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 2e-04
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 28/204 (13%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
ELK ELG G G V+K + ++L L + + + ++
Sbjct: 1 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 60
Query: 518 N---LVRMWG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
N +V +G F S+G + + E+++ SLD+ L + + + KV++ KGL YL
Sbjct: 61 NSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 119
Query: 574 H------HDEFEP-----------KIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWA 615
H + +P K+ DFG++ +L +NS GT+ YM+PE
Sbjct: 120 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERL 174
Query: 616 SNLPITAKVDVYSYGVVILEMVKG 639
+ + D++S G+ ++EM G
Sbjct: 175 QGTHYSVQSDIWSMGLSLVEMAIG 198
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 2e-04
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 34/201 (16%)
Query: 470 LGRGGSGAVYKGVLADGRA---VAVK--RLGDLHQGE-EVFWAEVSTIGKIYHMNLVRMW 523
LG G G+V +G L + VAVK ++ + E E F +E + + H N++R+
Sbjct: 7 LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66
Query: 524 GFCSEGRHR------LLIYEYVEKQSLDKHLFSS------YFLGWKERFKVALGTAKGLA 571
G C + ++I +++ L L S +L + K A G+
Sbjct: 67 GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME 126
Query: 572 YLHHDEFEPK----------------IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
YL F + +ADFGL+K G Q + ++A E
Sbjct: 127 YLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESL 186
Query: 616 SNLPITAKVDVYSYGVVILEM 636
++ T K DV+S+GV + E+
Sbjct: 187 ADRVYTTKSDVWSFGVTMWEI 207
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 2e-04
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 38/177 (21%)
Query: 492 KRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS 551
K L DL E+ + IGK H N++ + G C++ +I EY K +L ++L +
Sbjct: 62 KDLSDLVSEMEM----MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 115
Query: 552 YFLGWKERFKVA----------------LGTAKGLAYL------HHDEFEP--------- 580
G + + +A A+G+ YL H D
Sbjct: 116 RPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNV 175
Query: 581 -KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KIADFGLA+ + + R +MAPE + T + DV+S+GV++ E+
Sbjct: 176 MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 232
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 30/196 (15%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV-FWA--EVSTIGKIYHMNLVRMW 523
E+LG G VYKG+ +G+ VA+K + + E V F A E S + + H N+V +
Sbjct: 11 EKLGEGSYATVYKGISRINGQLVALKVI-SMKTEEGVPFTAIREASLLKGLKHANIVLLH 69
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL---GTAKGLAYLH-----H 575
++EY+ D + G + V L +GLAY+H H
Sbjct: 70 DIIHTKETLTFVFEYMHT---DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILH 126
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAK 623
+ +P K+ADFGLA+ + S +S T Y P+ ++
Sbjct: 127 RDLKPQNLLISYLGELKLADFGLAR--AKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSA 184
Query: 624 VDVYSYGVVILEMVKG 639
+D++ G + +EM++G
Sbjct: 185 LDIWGAGCIFIEMLQG 200
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 44/204 (21%)
Query: 467 KEELGRGGSGAVYKGVLADGRAVAVKRL--------GDLHQGEEVFW-AEVSTIGKIYHM 517
++ LG+G G VY ++ D +AVA +RL G+L+ E V E + K+ H
Sbjct: 5 QQRLGKGSFGTVY--LVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHP 62
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLD----------KHLFSSYFLGWKERFKVALGTA 567
+V+ E +I EY E + LD K L + W + +
Sbjct: 63 AIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLL----- 117
Query: 568 KGLAYLH-----HDEFEPK----------IADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
G+ Y+H H + + K I DFG+++L + + + GT YM+P
Sbjct: 118 -GVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCDLA--TTFTGTPYYMSP 174
Query: 613 EWASNLPITAKVDVYSYGVVILEM 636
E + +K D++S G ++ EM
Sbjct: 175 EALKHQGYDSKSDIWSLGCILYEM 198
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 2e-04
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 26/194 (13%)
Query: 470 LGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEV------FWAEVSTIGKIYHMNLVRM 522
LG+G G VY AD GR +AVK++ + E E+ + + H +V+
Sbjct: 10 LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQY 69
Query: 523 WGFCSEGRHRLL--IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H 575
+G + R L E++ S+ L S L K +G++YLH H
Sbjct: 70 YGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVH 129
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNS-SQFSQIRGTKGYMAPEWASNLPITAK 623
+ + K+ DFG +K Q S + + GT +M+PE S K
Sbjct: 130 RDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRK 189
Query: 624 VDVYSYGVVILEMV 637
D++S G ++EM+
Sbjct: 190 ADIWSVGCTVVEML 203
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 3e-04
Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 23/191 (12%)
Query: 470 LGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMWGF 525
+G G G V K + G+ VA+K+ + + V E+ + ++ H NLV +
Sbjct: 9 VGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEV 68
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP 580
+ L++E+V+ LD L K +G+ + H H + +P
Sbjct: 69 FRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKP 128
Query: 581 -----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDVYS 628
K+ DFG A+ ++ T+ Y APE + VD+++
Sbjct: 129 ENILVSQSGVVKLCDFGFARTLAAPGEV--YTDYVATRWYRAPELLVGDTKYGRAVDIWA 186
Query: 629 YGVVILEMVKG 639
G ++ EM+ G
Sbjct: 187 VGCLVTEMLTG 197
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 3e-04
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 47/203 (23%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDLHQ---GEEVFWAEVSTIGKIYHMNLVR 521
LG G G VYKG+ + +G VA+K L + +E+ E + + + ++ R
Sbjct: 15 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL-DEAYVMASVDNPHVCR 73
Query: 522 MWGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
+ G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 74 LLGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYL 125
Query: 574 ------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEW 614
H D KI DFGLAKL G++ ++ G K +MA E
Sbjct: 126 EERRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGADEKEY-HAEGGKVPIKWMALES 182
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 183 ILHRIYTHQSDVWSYGVTVWELM 205
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 3e-04
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 22/94 (23%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKL------SQRGSNSSQFSQIRGT 606
L YLH H + +P K+ DFGL+K+ + + +I GT
Sbjct: 105 ALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGT 164
Query: 607 KGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI 640
Y+APE + VD +S G ++ E + GI
Sbjct: 165 PDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGI 198
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 3e-04
Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 30/195 (15%)
Query: 470 LGRGGSGAVYK-GVLADGRAVAVKRLGD----LHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
LG+GG G V V A G+ A K+L +GE++ E + K+ +V +
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSL-A 59
Query: 525 FCSEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKE---RFKVALGTAKGLAYLH-----H 575
+ E + L L+ + L H+++ G+ E F A GL +LH +
Sbjct: 60 YAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAA-QIICGLEHLHQRRIVY 118
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P +I+D GLA + G + GT GYMAPE V
Sbjct: 119 RDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRA---GTPGYMAPEVLQGEVYDFSV 175
Query: 625 DVYSYGVVILEMVKG 639
D ++ G + EM+ G
Sbjct: 176 DWFALGCTLYEMIAG 190
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 3e-04
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 40/211 (18%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA-DGR---AVAVK--RLGDLHQGEEVFWAEVSTI 511
EL + + LG G G + +G L + VA+ R G + F AE T+
Sbjct: 1 ELDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTL 60
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLD----KH---LFSSYFLGWKERFKVAL 564
G+ H N+VR+ G + G +++ EY+ +LD KH L + +G +
Sbjct: 61 GQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMG------MLP 114
Query: 565 GTAKGLAYL------------HH----DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG 608
G A G+ YL H + KI+ F Q + + ++ + G
Sbjct: 115 GLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRL---QEDKSEAIYTTMSGKSP 171
Query: 609 --YMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ APE ++ DV+S+G+V+ E++
Sbjct: 172 VLWAAPEAIQYHHFSSASDVWSFGIVMWEVM 202
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 3e-04
Identities = 51/186 (27%), Positives = 77/186 (41%), Gaps = 18/186 (9%)
Query: 469 ELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFW----AEVSTIGKIYHMNLVRMW 523
E+G G GAVY + + VA+K++ + W EV + K+ H N ++
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEFEPK-- 581
G L+ EY + D L E V G +GLAYLH +
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDV 141
Query: 582 ------IADFGLAKLSQRGSNS--SQFSQIRGTKGYMAPEWASNL---PITAKVDVYSYG 630
+++ GL KL GS S + + GT +MAPE + KVDV+S G
Sbjct: 142 KAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 201
Query: 631 VVILEM 636
+ +E+
Sbjct: 202 ITCIEL 207
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 3e-04
Identities = 60/198 (30%), Positives = 77/198 (38%), Gaps = 35/198 (17%)
Query: 470 LGRGGSGAV----YKGVLADGRAVAVKRL--GDLHQGEEV--FWAE---VSTIGKIYHMN 518
LGRG G V YK G A+K L GD+ +EV E T H
Sbjct: 7 LGRGHFGKVLLAEYKK---TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPF 63
Query: 519 LVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-- 576
LV ++ H + EY L H+ + F + F A GL YLH +
Sbjct: 64 LVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAAC-VVLGLQYLHENKI 122
Query: 577 --------------EFEPKIADFGLAKLSQ-RGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
E KIADFGL K G +S F GT ++APE + T
Sbjct: 123 VYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFC---GTPEFLAPEVLTETSYT 179
Query: 622 AKVDVYSYGVVILEMVKG 639
VD + GV+I EM+ G
Sbjct: 180 RAVDWWGLGVLIYEMLVG 197
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 4e-04
Identities = 54/206 (26%), Positives = 86/206 (41%), Gaps = 46/206 (22%)
Query: 469 ELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY---------HMN 518
E+G G G VYK G VA+K + + E+ +ST+ ++ H N
Sbjct: 7 EIGVGAYGTVYKARDPHSGHFVALKSV-RVQTNEDGL--PLSTVREVALLKRLEAFDHPN 63
Query: 519 LVRMWGFCSEGR-----HRLLIYEYVEKQSLDKHLFSSYFLGW-----KERFKVALGTAK 568
+VR+ C+ R L++E+V+ Q L +L G K+ + L +
Sbjct: 64 IVRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFL---R 119
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
GL +LH H + +P K+ADFGLA++ S + + T Y AP
Sbjct: 120 GLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY---SCQMALTPVVVTLWYRAP 176
Query: 613 EWASNLPITAKVDVYSYGVVILEMVK 638
E VD++S G + EM +
Sbjct: 177 EVLLQSTYATPVDMWSVGCIFAEMFR 202
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 4e-04
Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 40/200 (20%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 65
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAK--------GLAYLH- 574
L++E++ Q L K + +S G + L K GLA+ H
Sbjct: 66 DVIHTENKLYLVFEFLH-QDLKKFMDASPLSG------IPLPLIKSYLFQLLQGLAFCHS 118
Query: 575 ----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE--WASN 617
H + +P K+ADFGLA+ G ++ T Y APE
Sbjct: 119 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGCK 176
Query: 618 LPITAKVDVYSYGVVILEMV 637
TA VD++S G + EMV
Sbjct: 177 YYSTA-VDIWSLGCIFAEMV 195
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 4e-04
Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 38/177 (21%)
Query: 492 KRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL--- 548
K L DL E+ + IGK H N++ + G C++ +I EY K +L + L
Sbjct: 59 KDLADLISEMEL----MKLIGK--HKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRAR 112
Query: 549 -------------FSSYFLGWKERFKVALGTAKGLAYL------HHD----------EFE 579
L +K+ A A+G+ YL H D +
Sbjct: 113 RPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNV 172
Query: 580 PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KIADFGLA+ + S R +MAPE + T + DV+S+G+++ E+
Sbjct: 173 MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEI 229
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 4e-04
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
+++D GLA + G +Q + GT GYMAPE P + VD ++ G I EMV G
Sbjct: 135 RLSDLGLAVELKDGKTITQRA---GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAG 190
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 5e-04
Identities = 47/202 (23%), Positives = 75/202 (37%), Gaps = 33/202 (16%)
Query: 468 EELGRGGSGAVYKGVLADGRAVA---VKRLGDLHQGEE--VFWAEVSTIGKIYHMNLVRM 522
+E+G G G V G G + A VK L +E +F EV ++ H N+++
Sbjct: 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQC 60
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFS-----SYFLGWKERFKVALGTAKGLAYLHHDE 577
G C E LL+ E+ L +L S + ++A A GL +LH +
Sbjct: 61 LGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD 120
Query: 578 F----------------EPKIADFGLAKLSQRG----SNSSQFSQIRGTKGYMAPEWASN 617
F KI D+GLA + +R + +
Sbjct: 121 FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQD 180
Query: 618 L---PITAKVDVYSYGVVILEM 636
L T K +++S GV + E+
Sbjct: 181 LLPKDQTKKSNIWSLGVTMWEL 202
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 5e-04
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 31/199 (15%)
Query: 468 EELGRGGSGAVYKGVLAD-GRAVAVKR--LGDLHQGEEVF-WAEVSTIGKIYHMNLVRMW 523
E++G G G V+K + VA+KR L D +G E+ + ++ H N+VR++
Sbjct: 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLY 65
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGT---AKGLAYLH-----H 575
+ L++EY + Q L K+ S G + V KGLA+ H H
Sbjct: 66 DVLHSDKKLTLVFEYCD-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSHNVLH 122
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE--WASNLPITA 622
+ +P K+ADFGLA+ G +S T Y P+ + + L T+
Sbjct: 123 RDLKPQNLLINKNGELKLADFGLAR--AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTS 180
Query: 623 KVDVYSYGVVILEMVKGIR 641
+D++S G + E+ R
Sbjct: 181 -IDMWSAGCIFAELANAGR 198
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 5e-04
Identities = 57/240 (23%), Positives = 90/240 (37%), Gaps = 62/240 (25%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR----AVAVKRLGDLHQGE--EVFWAEVSTI 511
E+++ + +G G G VY+GV AVAVK + E F E +
Sbjct: 2 EIQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIM 61
Query: 512 GKIYHMNLVRMWGFCSEG----------RHRLLIYEYVEKQSLDKHLFSSYFLGWKERFK 561
+ H ++V++ G +E L Y V K SLD Y
Sbjct: 62 RQFDHPHIVKLIGVITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILY--------- 112
Query: 562 VALGTAKGLAYLHHDEF-------------EP---KIADFGLAKLSQRGSNSSQFSQIRG 605
+ + LAYL F P K+ DFGL++ S +
Sbjct: 113 -SYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRY------LEDESYYKA 165
Query: 606 TKG-----YMAPEWASNLPITAKVDVYSYGVVILE-MVKGIRLSNWV--------VEDGE 651
+KG +MAPE + T+ DV+ +GV + E ++ G++ V +E+GE
Sbjct: 166 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE 225
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 42.4 bits (99), Expect = 5e-04
Identities = 54/196 (27%), Positives = 77/196 (39%), Gaps = 34/196 (17%)
Query: 469 ELGRGGSGAVYKGVLADGRA---VAVKRLGDLHQGEEVFW----AEVSTIGKIYHMNLVR 521
E+G G GAVY D R VA+K++ + W EV + +I H N +
Sbjct: 32 EIGHGSFGAVY--FARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIE 89
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF--- 578
G L+ EY + D L E + G +GLAYLH
Sbjct: 90 YKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHR 149
Query: 579 ----------EP---KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL---PITA 622
EP K+ADFG A ++ S + GT +MAPE +
Sbjct: 150 DIKAGNILLTEPGQVKLADFGSASIA------SPANSFVGTPYWMAPEVILAMDEGQYDG 203
Query: 623 KVDVYSYGVVILEMVK 638
KVDV+S G+ +E+ +
Sbjct: 204 KVDVWSLGITCIELAE 219
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 6e-04
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLSQ-RGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KIADFG+ K G + F GT Y+APE + P VD ++YGV++ EM+ G
Sbjct: 141 KIADFGMCKEHMVDGVTTRTFC---GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAG 197
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 6e-04
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 36/197 (18%)
Query: 469 ELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMN---LVRMWG- 524
+LG G G+V K V K++ + V + + ++ +V +G
Sbjct: 12 DLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGA 71
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHL-----FSSYFLGWKERFKVALGTAKGLAYLH----- 574
F +E + + E+++ SLD+ LG K+A+ +GL YL+
Sbjct: 72 FLNEN-NICMCMEFMDCGSLDRIYKKGGPIPVEILG-----KIAVAVVEGLTYLYNVHRI 125
Query: 575 -HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITA 622
H + +P K+ DFG+ S NS + + GT YM+PE T
Sbjct: 126 MHRDIKPSNILVNSRGQIKLCDFGV---SGELINSIADTFV-GTSTYMSPERIQGGKYTV 181
Query: 623 KVDVYSYGVVILEMVKG 639
K DV+S G+ I+E+ G
Sbjct: 182 KSDVWSLGISIIELALG 198
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 6e-04
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 22/89 (24%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
G+ LH H + +P K+ DFGL S+ G + +F GT Y+AP
Sbjct: 109 GVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGL---SRNGLENKKFV---GTPDYLAP 162
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGIR 641
E + D +S G VI E + G
Sbjct: 163 ETILGVGDDKMSDWWSLGCVIFEFLFGYP 191
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|238010 cd00053, EGF, Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium | Back alignment and domain information |
|---|
Score = 37.5 bits (87), Expect = 7e-04
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 240 HGVCGKNGICVYTPE-PKCSCPPGYE 264
C G CV TP +C CPPGY
Sbjct: 5 SNPCSNGGTCVNTPGSYRCVCPPGYT 30
|
Length = 36 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 7e-04
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 29/128 (22%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE--------------EVFWAEVSTIGK 513
E LG+G ++KG+ + V G+LH+ E E F+ S + +
Sbjct: 1 ESLGQGTFTKIFKGIRRE-----VGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQ 55
Query: 514 IYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL---FSSYFLGWKERFKVALGTAKGL 570
+ H +LV +G C G +++ EYV+ SLD +L + + WK L AK L
Sbjct: 56 LSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWK------LEVAKQL 109
Query: 571 AY-LHHDE 577
A+ LH E
Sbjct: 110 AWALHFLE 117
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 9e-04
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 38/177 (21%)
Query: 492 KRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS- 550
K L DL E+ + IGK H N++ + G C++ +I EY K +L ++L +
Sbjct: 65 KDLSDLISEMEM----MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 118
Query: 551 -------SY--------FLGWKERFKVALGTAKGLAYL------HHD----------EFE 579
Y L +K+ A A+G+ YL H D +
Sbjct: 119 RPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 178
Query: 580 PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KIADFGLA+ + + R +MAPE + T + DV+S+GV++ E+
Sbjct: 179 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 235
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 9e-04
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 582 IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI 640
+ DFGL KL+ + + + GT Y+APE T VD ++ GV++ EM+ G+
Sbjct: 134 LCDFGLCKLNM--KDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGL 190
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.001
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 24/108 (22%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG- 639
KIADFG+ K + G ++ GT Y+APE VD +S+GV++ EM+ G
Sbjct: 136 KIADFGMCKENMLGD--AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQ 193
Query: 640 --------------IRLSN-----WVVEDGEGQEAELKRFVREVKRKI 668
IR+ N W+ E ++ +K FVRE +R++
Sbjct: 194 SPFHGHDEEELFQSIRMDNPCYPRWLTR--EAKDILVKLFVREPERRL 239
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 0.001
Identities = 49/220 (22%), Positives = 79/220 (35%), Gaps = 58/220 (26%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVF----WAEVSTIGKIYHMNLVRM 522
+LG G G VYK + GR VA+K++ +H ++ F E+ + K+ H N+V +
Sbjct: 14 GKLGEGTFGEVYKARQIKTGRVVALKKI-LMHNEKDGFPITALREIKILKKLKHPNVVPL 72
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLF---SSYF------LGWKERFKVALGTAK----- 568
+ + E +K + + Y L K+ K
Sbjct: 73 ----ID-----MAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQ 123
Query: 569 ---GLAYLHHDEF----------------EPKIADFGLAKL---------SQRGSNSSQF 600
G+ YLH + KIADFGLA+ G + ++
Sbjct: 124 LLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKY 183
Query: 601 SQIRGTKGYMAPEWASNLP-ITAKVDVYSYGVVILEMVKG 639
+ + T+ Y PE T VD++ G V EM
Sbjct: 184 TNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTR 223
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.001
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 44/200 (22%)
Query: 469 ELGRGGSGAVYKGVLADGRA---VAVKRLGDLHQGEEVFWAEVSTIGKIYHM----NLVR 521
ELG G G V KGV + VA+K L + + E+ E+ +I H +VR
Sbjct: 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKN--ENEKSVRDEMMREAEIMHQLDNPYIVR 59
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER-----------FKVALGTA--K 568
M G C E +L+ E L+K FL K+ +V++G +
Sbjct: 60 MIGVC-EAEALMLVMEMASGGPLNK------FLSGKKDEITVSNVVELMHQVSMGMKYLE 112
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWA 615
G ++H D + KI+DFGL+K G++ S + K + APE
Sbjct: 113 GKNFVHRDLAARNVLLVNQHYAKISDFGLSK--ALGADDSYYKARSAGKWPLKWYAPECI 170
Query: 616 SNLPITAKVDVYSYGVVILE 635
+ +++ DV+SYG+ + E
Sbjct: 171 NFRKFSSRSDVWSYGITMWE 190
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.001
Identities = 41/154 (26%), Positives = 61/154 (39%), Gaps = 45/154 (29%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWA--EVSTIGKIYHMNLVRMWG 524
++LG G VYKG G+ VA+K + H+ F A E S + + H N+V +
Sbjct: 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHD 70
Query: 525 FCSEGRHRLLIYEYVE---KQSLDKH----------LFSSYFLGWKERFKVALGTAKGLA 571
+ L++EY++ KQ +D LF L +GLA
Sbjct: 71 IIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLL-------------RGLA 117
Query: 572 YLHH----------------DEFEPKIADFGLAK 589
Y H + E K+ADFGLA+
Sbjct: 118 YCHQRRVLHRDLKPQNLLISERGELKLADFGLAR 151
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.001
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
G+ +LH H + +P KI DFGLA+ + S + T+ Y AP
Sbjct: 130 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAP 186
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKG 639
E + VD++S G ++ EM++G
Sbjct: 187 EVILGMGYKENVDIWSVGCIMGEMIRG 213
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.001
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 33/131 (25%)
Query: 524 GFCSEGR--HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HD 576
GFC G H+L K+ K L + + W + A L YLH H
Sbjct: 80 GFCEGGDLYHKL-------KEQKGKLLPENQVVEW------FVQIAMALQYLHEKHILHR 126
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVD 625
+ + K+ D G+A++ + + S + GT YM+PE SN P K D
Sbjct: 127 DLKTQNVFLTRTNIIKVGDLGIARVLE--NQCDMASTLIGTPYYMSPELFSNKPYNYKSD 184
Query: 626 VYSYGVVILEM 636
V++ G + EM
Sbjct: 185 VWALGCCVYEM 195
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|215662 pfam00024, PAN_1, PAN domain | Back alignment and domain information |
|---|
Score = 37.9 bits (88), Expect = 0.001
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Query: 292 FVGVPNTDFYGFDLNYSQTVSKEACMKLCLDDCR-CSGFSYRLTGQGLC--FTKSVLFNG 348
F VP T G D++ S E C LC ++ R C F+Y C + S
Sbjct: 3 FERVPGTSLSGTDVSVVDVPSAEECAALCTNEPRVCRSFTYN-PKSKECLLKSSSSGSLP 61
Query: 349 FKA-PNFPGIIY 359
+ + G+ Y
Sbjct: 62 PRLKRSDQGVDY 73
|
The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions. Length = 78 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 35/190 (18%)
Query: 478 VYKGVLADGRAVAVKRLGDLHQGE----EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533
+YKG+ + + V ++ H+G ++ E+ + +I N+++++GF + L
Sbjct: 36 IYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDL 94
Query: 534 ----LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEFEP--------- 580
LI EY + L + L L +K + +A+ KGL L+ +P
Sbjct: 95 PRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSF 154
Query: 581 --------KIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASNL--PITAKVDVYSY 629
KI GL K LS + F Y + + +++ T K D+YS
Sbjct: 155 LVTENYKLKIICHGLEKILSSPPFKNVNFM------VYFSYKMLNDIFSEYTIKDDIYSL 208
Query: 630 GVVILEMVKG 639
GVV+ E+ G
Sbjct: 209 GVVLWEIFTG 218
|
Length = 283 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.002
Identities = 56/238 (23%), Positives = 89/238 (37%), Gaps = 62/238 (26%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD---------------GRA--VAVK--RLGDLH 498
+ + FKE+LG G G V+ + + GR VAVK R
Sbjct: 1 KFPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANK 60
Query: 499 QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFL---- 554
F EV + ++ N++R+ G C + +I EY+E L++ L S +
Sbjct: 61 NARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEE 120
Query: 555 ---------------GWKERFKVALGTAKGLAYL------HHD----------EFEPKIA 583
+ VAL A G+ YL H D KIA
Sbjct: 121 NGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIA 180
Query: 584 DFGLAKLSQRGSNSSQFSQIRGTK----GYMAPEWASNLPITAKVDVYSYGVVILEMV 637
DFG++ R + + +I+G +MA E T DV+++GV + E++
Sbjct: 181 DFGMS----RNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL 234
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.002
Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 41/207 (19%)
Query: 466 FKEELGRGGSGAVYKGVL--ADGRAVAVKRLGDLHQGEEVF---WAEVSTIGKIYHMNLV 520
+ELG+G G+VYK VL G +A+K + L E F E+ + K +V
Sbjct: 5 VLDELGKGNYGSVYK-VLHRPTGVTMAMKEI-RLELDESKFNQIIMELDILHKAVSPYIV 62
Query: 521 RMWG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER---FKVALGTAKGLAYLH-- 574
+G F EG + + EY++ SLDK ++ KGL +L
Sbjct: 63 DFYGAFFIEGAVYMCM-EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE 121
Query: 575 ----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIR-GTKGYMAPEWAS-- 616
H + +P K+ DFG++ G+ + ++ G + YMAPE
Sbjct: 122 HNIIHRDVKPTNVLVNGNGQVKLCDFGVS-----GNLVASLAKTNIGCQSYMAPERIKSG 176
Query: 617 ----NLPITAKVDVYSYGVVILEMVKG 639
N T + DV+S G+ ILEM G
Sbjct: 177 GPNQNPTYTVQSDVWSLGLSILEMALG 203
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.002
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 27/193 (13%)
Query: 470 LGRGGSGAVYKGVLADGRA-VAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRM-WG 524
+G G G V K + + VA+K+ D + EEV E+ + + N+V +
Sbjct: 9 VGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEA 68
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----HDE 577
F G+ L++EYVEK L+ L G E+ + + K + + H H +
Sbjct: 69 FRRRGK-LYLVFEYVEKNMLE--LLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRD 125
Query: 578 FEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
+P K+ DFG A+ GSN++ +++ T+ Y +PE P VD+
Sbjct: 126 IKPENLLISHNDVLKLCDFGFARNLSEGSNAN-YTEYVATRWYRSPELLLGAPYGKAVDM 184
Query: 627 YSYGVVILEMVKG 639
+S G ++ E+ G
Sbjct: 185 WSVGCILGELSDG 197
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.002
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 26/194 (13%)
Query: 468 EELGRGGSGAVYKG--VLADGRAVAVKRLGDLHQGEEVFWA--EVSTIGKIYHMNLVRMW 523
E+LG G V+KG L + VA+K + H+ A EVS + + H N+V +
Sbjct: 12 EKLGEGTYATVFKGRSKLTEN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL-GTAKGLAYLH-----HDE 577
+ L++EY++K L +++ + K+ L +GLAY H H +
Sbjct: 71 DIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRD 129
Query: 578 FEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAKVD 625
+P K+ADFGLA+ + + +S T Y P+ + + ++D
Sbjct: 130 LKPQNLLINERGELKLADFGLAR--AKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQID 187
Query: 626 VYSYGVVILEMVKG 639
++ G + EM G
Sbjct: 188 MWGVGCIFFEMASG 201
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.002
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 26/194 (13%)
Query: 470 LGRGGSGAVYKGVLAD-GRAVAVKRL----GDLHQGEEV--FWAEVSTIGKIYHMNLVRM 522
LGRG G VY AD GR +AVK++ +EV E+ + + H +V+
Sbjct: 10 LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQY 69
Query: 523 WGFCSEGRHRLL--IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H 575
+G + + L EY+ S+ L + L + +G++YLH H
Sbjct: 70 YGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVH 129
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNS-SQFSQIRGTKGYMAPEWASNLPITAK 623
+ + K+ DFG +K Q S + + GT +M+PE S K
Sbjct: 130 RDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRK 189
Query: 624 VDVYSYGVVILEMV 637
DV+S ++EM+
Sbjct: 190 ADVWSVACTVVEML 203
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.003
Identities = 54/230 (23%), Positives = 88/230 (38%), Gaps = 56/230 (24%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY------------KGVLADGRA-----VAVKRL-GDLHQ 499
E + +FKE+LG G G V+ K D VAVK L D ++
Sbjct: 1 EFPRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANK 60
Query: 500 -GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE----KQSLDKHLF----- 549
F E+ + ++ N++R+ C +I EY+E Q L +H
Sbjct: 61 NARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAE 120
Query: 550 --SSYFLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLS 591
+ + +A A G+ YL H D + KIADFG+++
Sbjct: 121 KADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNL 180
Query: 592 QRGSNSSQFSQIRGTKGYMAPEWASNLPI-----TAKVDVYSYGVVILEM 636
G + +I+G + + W S I T DV+++GV + E+
Sbjct: 181 YSGD----YYRIQG-RAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEI 225
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.003
Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 46/204 (22%)
Query: 469 ELGRGGSGAVYK------GVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
ELG G G VYK G LA + + K +L E + E+ + H +V++
Sbjct: 19 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL----EDYMVEIEILATCNHPYIVKL 74
Query: 523 WG-FCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLH-----H 575
G F +G+ ++I E+ ++D + L + + + L YLH H
Sbjct: 75 LGAFYWDGKLWIMI-EFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIH 133
Query: 576 DEF-----------EPKIADFGLA-----KLSQRGSNSSQFSQIRGTKGYMAPEWA---- 615
+ + K+ADFG++ L +R S GT +MAPE
Sbjct: 134 RDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDS-------FIGTPYWMAPEVVMCET 186
Query: 616 -SNLPITAKVDVYSYGVVILEMVK 638
+ P K D++S G+ ++EM +
Sbjct: 187 MKDTPYDYKADIWSLGITLIEMAQ 210
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.003
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 26/194 (13%)
Query: 468 EELGRGGSGAVYKG--VLADGRAVAVKRLGDLHQGEEVFWA--EVSTIGKIYHMNLVRMW 523
++LG G VYKG L D VA+K + H+ A EVS + + H N+V +
Sbjct: 12 DKLGEGTYATVYKGRSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL-GTAKGLAYLH-----HDE 577
+ L++EY++K L ++L K+ L +GL Y H H +
Sbjct: 71 DIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRD 129
Query: 578 FEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAKVD 625
+P K+ADFGLA+ + + +S T Y P+ + + ++D
Sbjct: 130 LKPQNLLINERGELKLADFGLAR--AKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQID 187
Query: 626 VYSYGVVILEMVKG 639
++ G + EM G
Sbjct: 188 MWGVGCIFYEMSTG 201
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.003
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ADFG+ K G ++ F GT Y+APE L VD ++ GV++ EM+ G
Sbjct: 136 KLADFGMCKEGILNGVTTTTFC---GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAG 192
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.003
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KI DFG++K+ S+ S+ + GT Y++PE P K D+++ G V+ E+
Sbjct: 142 KIGDFGISKIL---SSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYEL 194
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.003
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 47/204 (23%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEE----VFWAEVSTIGKIYHMNLVRM 522
E++G G G VYKG G+ VA+K++ L EE E+S + ++ H N+V +
Sbjct: 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKI-RLESEEEGVPSTAIREISLLKELQHPNIVCL 64
Query: 523 WGFCSEGRHRLLIYEYVE------------KQSLDKHLFSSYFLGWKERFKVALGTAKGL 570
+ LI+E++ Q +D L SY +++ +G+
Sbjct: 65 QDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYL------YQI----LQGI 114
Query: 571 AYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW 614
+ H H + +P K+ADFGLA+ G ++ T Y APE
Sbjct: 115 LFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLAR--AFGIPVRVYTHEVVTLWYRAPEV 172
Query: 615 ASNLP-ITAKVDVYSYGVVILEMV 637
P + VD++S G + EM
Sbjct: 173 LLGSPRYSTPVDIWSIGTIFAEMA 196
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.003
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 19/123 (15%)
Query: 468 EELGRGGSGAVYKGVLADGR-------------AVAVKRLGDLHQGEEV-FWAEVSTIGK 513
E LGRG +Y G+L V +K L H+ + F+ S + +
Sbjct: 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQ 60
Query: 514 IYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF---SSYFLGWKERFKVALGTAKGL 570
+ H ++V ++G C +++ E+VE LD LF S L +FKVA A L
Sbjct: 61 VSHKHIVLLYGVCVRDVENIMVEEFVEFGPLD--LFMHRKSDVLTTPWKFKVAKQLASAL 118
Query: 571 AYL 573
+YL
Sbjct: 119 SYL 121
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262 |
| >gnl|CDD|215652 pfam00008, EGF, EGF-like domain | Back alignment and domain information |
|---|
Score = 35.5 bits (82), Expect = 0.003
Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 1/22 (4%)
Query: 243 CGKNGICVYTPE-PKCSCPPGY 263
C G CV TP C CP GY
Sbjct: 7 CSNGGTCVDTPGGYTCECPEGY 28
|
There is no clear separation between noise and signal. pfam00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is the main reason of discrepancy between swiss-prot domain start/end and Pfam). The family is hard to model due to many similar but different sub-types of EGF domains. Pfam certainly misses a number of EGF domains. Length = 32 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.003
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 33/126 (26%)
Query: 537 EYVEKQSLDKHLFSS-----YFLGWKERFKVALGTAKGLAYLH------HDEFEP----- 580
E+++ SLD+ L + LG K+++ +GL YL H + +P
Sbjct: 79 EHMDGGSLDQVLKKAGRIPENILG-----KISIAVLRGLTYLREKHKIMHRDVKPSNILV 133
Query: 581 ------KIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVI 633
K+ DFG++ +L +NS GT+ YM+PE T + D++S G+ +
Sbjct: 134 NSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYTVQSDIWSLGLSL 188
Query: 634 LEMVKG 639
+EM G
Sbjct: 189 VEMAIG 194
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins | Back alignment and domain information |
|---|
Score = 35.3 bits (82), Expect = 0.004
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 240 HGVCGKNGICVYTPE-PKCSCPPGYE 264
C G CV T +CSCPPGY
Sbjct: 8 GNPCQNGGTCVNTVGSYRCSCPPGYT 33
|
Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.004
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 42/212 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVF----WAEVSTIG 512
EL + S K+ +G G G+V + G VA+K+L Q E+F + E++ +
Sbjct: 12 ELPERYTSLKQ-VGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLK 69
Query: 513 KIYHMNLVRMWG-FCSEGRHR-------LLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL 564
+ H N++ + F S ++ Y + Q + H S K ++ V
Sbjct: 70 HMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSED----KVQYLV-Y 124
Query: 565 GTAKGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKG 608
GL Y+H H + +P KI DFGLA+ ++ + T+
Sbjct: 125 QMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRW 179
Query: 609 YMAPEWASN-LPITAKVDVYSYGVVILEMVKG 639
Y APE N + VD++S G ++ EM+ G
Sbjct: 180 YRAPEVILNWMHYNQTVDIWSVGCIMAEMLTG 211
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.004
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 32/197 (16%)
Query: 468 EELGRGGSGAVYKG-VLADGRAVAVKRLGDLHQGEEVFWA--EVSTIGKIYHMNLVRMWG 524
++LG G V+KG VA+K + H+ A EVS + + H N+V +
Sbjct: 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHD 70
Query: 525 FCSEGRHRLLIYEYVE---KQSLDK--HLFSSYFLGWKERFKVALGTAKGLAYLHH---- 575
R L++EY++ KQ LD +L S + + + F L +GL+Y H
Sbjct: 71 IIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNV---KIFMFQL--LRGLSYCHKRKIL 125
Query: 576 ------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITA 622
++ E K+ADFGLA+ + + +S T Y P+ + +
Sbjct: 126 HRDLKPQNLLINEKGELKLADFGLAR--AKSVPTKTYSNEVVTLWYRPPDVLLGSTEYST 183
Query: 623 KVDVYSYGVVILEMVKG 639
+D++ G ++ EM G
Sbjct: 184 PIDMWGVGCILYEMATG 200
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.004
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 18/101 (17%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRG---TKGYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+I+D GLA G IRG T GYMAPE N T D + G +I EM+
Sbjct: 142 RISDLGLAVEIPEGE------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMI 195
Query: 638 KGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678
+G ++ ++KR EV+R++ ++E + E+
Sbjct: 196 EG-------KSPFRQRKEKVKR--EEVERRVKEDQEEYSEK 227
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.004
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ DFGL+K S + GT YMAPE + T D +S+GV++ EM+ G
Sbjct: 138 KLTDFGLSKESIDHEKKAY--SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 194
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 736 | |||
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.98 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.98 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.98 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.98 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.98 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.98 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.98 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.98 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.98 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.98 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.98 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.98 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.98 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.98 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.98 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.98 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.98 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.98 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.98 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.98 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.98 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.98 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.98 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.98 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.98 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.97 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.97 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.97 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.97 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.97 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.97 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.97 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.97 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.97 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.97 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.97 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.97 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.97 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.97 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.97 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.97 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.97 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.97 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.97 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.97 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.97 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.97 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.97 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.97 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.97 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.97 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.97 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.97 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.97 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.97 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.97 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.97 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.97 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.97 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.97 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.97 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.97 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.97 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.97 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.97 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.97 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.97 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.97 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.97 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.97 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.97 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.97 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.97 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.97 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.97 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.97 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.97 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.97 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.97 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.97 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.97 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.97 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.97 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.97 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.97 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.97 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.97 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.97 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.97 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.97 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.97 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.97 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.97 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.97 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.97 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.97 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.97 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.97 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.97 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.97 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.97 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.97 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.97 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.97 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.97 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.97 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.97 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.97 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.97 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.97 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.97 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.97 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.97 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.96 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.96 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.96 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.96 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.96 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.96 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.96 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.96 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.96 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.96 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.96 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.96 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.96 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.96 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.96 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.96 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.96 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.96 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.96 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.96 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.96 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.96 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.96 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.96 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.96 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.96 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.96 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.96 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.96 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.96 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.96 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.96 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.96 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.96 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.96 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.96 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.96 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.96 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.96 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.96 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.95 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.95 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.95 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.95 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.95 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.95 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.95 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.95 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.95 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.95 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.95 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.95 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.95 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.95 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.95 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.95 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.95 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.95 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.95 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.95 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.95 | |
| PF01453 | 114 | B_lectin: D-mannose binding lectin; InterPro: IPR0 | 99.95 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.95 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.95 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.95 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.95 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.94 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.94 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.94 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.93 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.93 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.93 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.93 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.93 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.92 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.92 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.92 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.91 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.91 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.91 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.91 | |
| cd00028 | 116 | B_lectin Bulb-type mannose-specific lectin. The do | 99.91 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.9 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.89 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.89 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.89 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.89 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.89 | |
| smart00108 | 114 | B_lectin Bulb-type mannose-specific lectin. | 99.89 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.88 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.87 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.86 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.85 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.85 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.84 | |
| PF00954 | 110 | S_locus_glycop: S-locus glycoprotein family; Inter | 99.84 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.8 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.73 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.7 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.68 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.67 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.62 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.55 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.55 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.5 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.49 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.49 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.47 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.45 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.44 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.38 | |
| PF08276 | 66 | PAN_2: PAN-like domain; InterPro: IPR013227 PAN do | 99.35 | |
| cd01098 | 84 | PAN_AP_plant Plant PAN/APPLE-like domain; present | 99.34 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.3 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.29 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.28 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.27 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.25 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.24 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.2 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.2 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.18 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.13 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.12 | |
| cd00129 | 80 | PAN_APPLE PAN/APPLE-like domain; present in N-term | 99.11 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 98.98 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.95 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 98.87 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 98.81 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 98.57 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.44 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.38 | |
| smart00108 | 114 | B_lectin Bulb-type mannose-specific lectin. | 98.37 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.35 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 98.33 | |
| smart00473 | 78 | PAN_AP divergent subfamily of APPLE domains. Apple | 98.24 | |
| cd00028 | 116 | B_lectin Bulb-type mannose-specific lectin. The do | 98.24 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 98.2 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.19 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.15 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 98.09 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 97.88 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 97.75 | |
| cd01100 | 73 | APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d | 97.55 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 97.5 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 97.32 | |
| PF01453 | 114 | B_lectin: D-mannose binding lectin; InterPro: IPR0 | 97.3 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 97.19 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 97.09 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 96.9 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 96.54 | |
| PF13095 | 207 | FTA2: Kinetochore Sim4 complex subunit FTA2 | 96.38 | |
| PLN02876 | 822 | acyl-CoA dehydrogenase | 96.32 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 96.3 | |
| PRK10593 | 297 | hypothetical protein; Provisional | 96.24 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 96.22 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 96.19 | |
| KOG1093 | 725 | consensus Predicted protein kinase (contains TBC a | 96.17 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 95.84 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 95.16 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 95.09 | |
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 94.68 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 94.52 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 94.27 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 94.26 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 94.06 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 92.41 | |
| smart00223 | 79 | APPLE APPLE domain. Four-fold repeat in plasma kal | 91.8 | |
| KOG1826 | 2724 | consensus Ras GTPase activating protein RasGAP/neu | 91.55 | |
| PF14295 | 51 | PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A. | 91.11 | |
| PRK09550 | 401 | mtnK methylthioribose kinase; Reviewed | 90.77 | |
| cd05157 | 235 | ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. | 90.72 | |
| PF00024 | 79 | PAN_1: PAN domain This Prosite entry concerns appl | 90.28 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 89.76 | |
| PF10707 | 199 | YrbL-PhoP_reg: PhoP regulatory network protein Yrb | 89.4 | |
| PF03109 | 119 | ABC1: ABC1 family; InterPro: IPR004147 This entry | 88.15 | |
| cd05155 | 235 | APH_ChoK_like_1 Uncharacterized bacterial proteins | 86.84 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 83.14 | |
| PF03881 | 288 | Fructosamin_kin: Fructosamine kinase; InterPro: IP | 82.74 | |
| PF07645 | 42 | EGF_CA: Calcium-binding EGF domain; InterPro: IPR0 | 82.18 | |
| PLN02756 | 418 | S-methyl-5-thioribose kinase | 81.46 | |
| cd05156 | 302 | ChoK_euk Choline Kinase (ChoK) in eukaryotes. The | 81.04 |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-45 Score=392.67 Aligned_cols=265 Identities=45% Similarity=0.765 Sum_probs=227.4
Q ss_pred ccccccHHHHHHhhhhcc--cccCeeceeEEEEeeeCCCcEEEEEEeCccccc-HHHHHHHHHHHhcCCCCceeeEEEEE
Q 041821 450 QFRRFSYAELKKSTKSFK--EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQG-EEVFWAEVSTIGKIYHMNLVRMWGFC 526 (736)
Q Consensus 450 ~~~~~~~~~i~~~~~~~~--~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~ 526 (736)
..+.|++.+|..+|.+|. ..||+|+||.||+|.+++++.||||++...... .++|.+|+.+|.+++|||||+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 567899999999999999 589999999999999999999999999765544 66799999999999999999999999
Q ss_pred EeCC-eEEEEEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcC-------------------CCccEEcc
Q 041821 527 SEGR-HRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHD-------------------EFEPKIAD 584 (736)
Q Consensus 527 ~~~~-~~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~-------------------~~~~kl~D 584 (736)
.+.+ +.+||||||++|+|.++|+... +++|..|++|+.++|+||+|||+. ++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9998 5999999999999999998765 899999999999999999999953 67999999
Q ss_pred cCcccccCC-CCCcceeecc-cccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHH
Q 041821 585 FGLAKLSQR-GSNSSQFSQI-RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR 662 (736)
Q Consensus 585 FGla~~~~~-~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 662 (736)
||+|+.... ... .... .||.+|+|||++..+..+.|+|||||||+|+||++|+++.+......+ ..++.
T Consensus 221 FGLa~~~~~~~~~---~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~------~~l~~ 291 (361)
T KOG1187|consen 221 FGLAKLGPEGDTS---VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGE------LSLVE 291 (361)
T ss_pred ccCcccCCccccc---eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCccc------ccHHH
Confidence 999976654 221 2222 799999999999999999999999999999999999988875432211 22566
Q ss_pred HHHHHHhhhccccccccccCccC-CCCCH-HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 663 EVKRKILYEEEAWIEEIVDPRLK-GKFNT-NQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~d~~~~-~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
|+...+..+. +.+++|+.+. ...+. .+..++..++.+|++.+|++||+|.||+++|+.+..
T Consensus 292 w~~~~~~~~~---~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 292 WAKPLLEEGK---LREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHHHHHHCcc---hhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 6666555554 9999999987 55554 688899999999999999999999999999976654
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=358.20 Aligned_cols=242 Identities=29% Similarity=0.432 Sum_probs=198.0
Q ss_pred HhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccccc---HHHHHHHHHHHhcCCCCceeeEEEEEEeCC-eEEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMWGFCSEGR-HRLLIY 536 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ 536 (736)
.....+.+.||+|+||+||+|.+.....||||++...... .+.|.+|+.+|.+++|||||+++|+|.+.. ..+|||
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence 3344455669999999999999965445999999764322 568999999999999999999999999988 799999
Q ss_pred ecCCCCCHhhhccc--CCCCCHHHHHHHHHHHHHHhhhhhcCC------------------CccEEcccCcccccCCCCC
Q 041821 537 EYVEKQSLDKHLFS--SYFLGWKERFKVALGTAKGLAYLHHDE------------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 537 e~~~~gsL~~~l~~--~~~l~~~~~~~i~~~i~~gL~yLH~~~------------------~~~kl~DFGla~~~~~~~~ 596 (736)
|||++|+|.++++. ...+++..+++++.|||+||.|||+++ .++||+|||+++......
T Consensus 120 Ey~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~- 198 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK- 198 (362)
T ss_pred EeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence 99999999999988 468999999999999999999999876 278999999998766532
Q ss_pred cceeecccccCcccChhccc--CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 597 SSQFSQIRGTKGYMAPEWAS--NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
...+...||+.|||||++. ..+|+.|+|||||||+||||+||+.||..... ...
T Consensus 199 -~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~---------~~~-------------- 254 (362)
T KOG0192|consen 199 -TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP---------VQV-------------- 254 (362)
T ss_pred -ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH---------HHH--------------
Confidence 1234478999999999999 56899999999999999999999999975432 011
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
...++....+...+..+...+..|+.+||+.||..||++.+|+..|+.+....
T Consensus 255 -~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 255 -ASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred -HHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 11112222333444457788999999999999999999999999999876543
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-41 Score=355.87 Aligned_cols=231 Identities=25% Similarity=0.309 Sum_probs=197.5
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCc----ccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGD----LHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
.+|...+.||+|||+.||+++. ..|+.||+|++.+ .....+.+.+||++.+.|+|||||+++++|++.+..|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5678888999999999999995 7899999999976 3345677899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|+|++++|.+++++.+++++.+++.+++||+.||.|||+. ++++||+|||||..+..+... .
T Consensus 98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er--k 175 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER--K 175 (592)
T ss_pred EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccc--c
Confidence 9999999999999888999999999999999999999975 448999999999988765433 5
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
.+.+|||.|+|||++....++..+||||+||+||.|+.|++||+... +. ....++...+
T Consensus 176 ~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~---------vk----ety~~Ik~~~-------- 234 (592)
T KOG0575|consen 176 KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT---------VK----ETYNKIKLNE-------- 234 (592)
T ss_pred ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch---------HH----HHHHHHHhcC--------
Confidence 67899999999999999999999999999999999999999997331 11 2222222111
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
-.+|...+....+||.++|+.||.+|||+++|+.+
T Consensus 235 -----Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 235 -----YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred -----cccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 12333455678899999999999999999999975
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=354.08 Aligned_cols=247 Identities=26% Similarity=0.365 Sum_probs=208.2
Q ss_pred HHHHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 456 YAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 456 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
..++.+..+.+.+.||+|.||+||.|.+.....||+|.++......+.|.+|+++|++|+|+|||+++|+|..++.++||
T Consensus 200 ~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIV 279 (468)
T KOG0197|consen 200 PWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIV 279 (468)
T ss_pred CeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEE
Confidence 34667778889999999999999999997777999999988777778899999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccc--CCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCc
Q 041821 536 YEYVEKQSLDKHLFS--SYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~--~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~ 597 (736)
||||+.|+|.++|+. ...+...+.+.++.|||+||+||+++ +..+||+|||||+.+..+...
T Consensus 280 tE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~ 359 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT 359 (468)
T ss_pred EEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCcee
Confidence 999999999999987 34799999999999999999999865 337899999999965544332
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
. .....-...|.|||.+....|+.|||||||||+||||+| |+.|+..... .. +
T Consensus 360 ~-~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn---------~e----------------v 413 (468)
T KOG0197|consen 360 A-SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN---------EE----------------V 413 (468)
T ss_pred e-cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH---------HH----------------H
Confidence 2 222334679999999999999999999999999999999 5666543211 11 3
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
.+.++...+-..|..++..+.+||..||+.+|++|||++.+...|+.+....
T Consensus 414 ~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 414 LELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred HHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 4445555666677788999999999999999999999999999998876543
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=364.80 Aligned_cols=251 Identities=28% Similarity=0.393 Sum_probs=205.6
Q ss_pred HHHHHHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEE
Q 041821 456 YAELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCS 527 (736)
Q Consensus 456 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 527 (736)
..++......+.++||+|+||+||+|+.. +...||||.++... +..++|.+|+++|+.++|||||+|+|+|.
T Consensus 480 ~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~ 559 (774)
T KOG1026|consen 480 VLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR 559 (774)
T ss_pred eeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence 44677888889999999999999999943 24679999998644 46788999999999999999999999999
Q ss_pred eCCeEEEEEecCCCCCHhhhcccCC--------------CCCHHHHHHHHHHHHHHhhhhhcC----------------C
Q 041821 528 EGRHRLLIYEYVEKQSLDKHLFSSY--------------FLGWKERFKVALGTAKGLAYLHHD----------------E 577 (736)
Q Consensus 528 ~~~~~~lv~e~~~~gsL~~~l~~~~--------------~l~~~~~~~i~~~i~~gL~yLH~~----------------~ 577 (736)
+++..++|+|||..|||.++|.... +|+..+.+.||.|||.||.||-++ +
T Consensus 560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence 9999999999999999999996421 388999999999999999999543 4
Q ss_pred CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhH
Q 041821 578 FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAE 656 (736)
Q Consensus 578 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~ 656 (736)
+.+||+||||+|.+-..+.......---..+|||||.+..++|+++||||||||+|||+++ |+.|+......
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~------- 712 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ------- 712 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH-------
Confidence 5899999999997765544332222334679999999999999999999999999999998 77887644321
Q ss_pred HHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccccc
Q 041821 657 LKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEIH 731 (736)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 731 (736)
++ +..+-+.++ -+.|..++..+.+||..||+.+|++||+++||-..|+...+..+..
T Consensus 713 ------EV-----------Ie~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~~ 769 (774)
T KOG1026|consen 713 ------EV-----------IECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPKY 769 (774)
T ss_pred ------HH-----------HHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCccc
Confidence 11 111222222 4567788899999999999999999999999999999987766553
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=333.40 Aligned_cols=237 Identities=24% Similarity=0.295 Sum_probs=193.1
Q ss_pred HHhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcccc--------cHHHHHHHHHHHhcCCCCceeeEEEEEEeCC
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQ--------GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR 530 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 530 (736)
....|-+.+.||+|+||.|-+|. .++|+.||||++++... ......+|+++|++|+|||||++++++...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 45677888999999999999999 56799999999965321 1233579999999999999999999999999
Q ss_pred eEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCccccc
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLS 591 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~~~ 591 (736)
..||||||+.+|+|.+++-..+.+.+..-+.++.|++.|+.|||+.++ .+||+|||+|+..
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~ 329 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS 329 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcc
Confidence 999999999999999999999999999999999999999999997643 6799999999988
Q ss_pred CCCCCcceeecccccCcccChhcccCCC---CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHH
Q 041821 592 QRGSNSSQFSQIRGTKGYMAPEWASNLP---ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKI 668 (736)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (736)
+... .+.+.+||+.|.|||++.+.. +..++||||+||+||-+++|.+||.....+.. ..+++
T Consensus 330 g~~s---fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s------------l~eQI 394 (475)
T KOG0615|consen 330 GEGS---FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS------------LKEQI 394 (475)
T ss_pred ccce---ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc------------HHHHH
Confidence 7443 367899999999999998654 34488999999999999999999985543321 11111
Q ss_pred hhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 669 LYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 669 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+. + ...+.......++.++||.+||..||++|||++|+++|
T Consensus 395 ~~G~---y------~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 395 LKGR---Y------AFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred hcCc---c------cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 1111 0 00112234556789999999999999999999999875
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-39 Score=322.36 Aligned_cols=234 Identities=24% Similarity=0.272 Sum_probs=193.4
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCc--ccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC-eEEEEEec
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGD--LHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR-HRLLIYEY 538 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 538 (736)
..+..+.||+|..|+|||++++ +++.+|+|.+.. .....+++.+|++++++.+||+||++||.|..+. ...|+|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 3445678999999999999964 588999999943 3445678999999999999999999999999988 59999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhc-C----------------CCccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH-D----------------EFEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~-~----------------~~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|.+|||+.+++..+.+++...-.|+.++++||.|||+ + .+++||+|||.++.+... ...
T Consensus 160 MDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS----~a~ 235 (364)
T KOG0581|consen 160 MDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS----IAN 235 (364)
T ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh----hcc
Confidence 9999999999988889999999999999999999995 2 347899999999987654 256
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
+.+||..|||||.+.+..|+.++||||||++++|+.+|+.|+....++.. ....+ +..+++
T Consensus 236 tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~----~~~~L---------------l~~Iv~ 296 (364)
T KOG0581|consen 236 TFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYL----DIFEL---------------LCAIVD 296 (364)
T ss_pred cccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCC----CHHHH---------------HHHHhc
Confidence 78999999999999999999999999999999999999999875411111 11111 222333
Q ss_pred CccCCCCCH-HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 682 PRLKGKFNT-NQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 682 ~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
... +..+. ..++++.+++..||++||.+||++.|+++|
T Consensus 297 ~pp-P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 297 EPP-PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCC-CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 211 12233 367789999999999999999999999987
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=325.10 Aligned_cols=182 Identities=26% Similarity=0.364 Sum_probs=163.9
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
..|.+.++||+|+||+||+|+++ ++..||||.+.+. .+..+.+..|+.+|+.++|||||++++++..++..+||||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 45777888999999999999954 4899999999654 2345667899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------------CccEEcccCcccccCCCC
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------------~~~kl~DFGla~~~~~~~ 595 (736)
||.+|+|.++|+..+.+++..++.++.|||.||++||+++ ..+||+|||+|+.+....
T Consensus 90 yC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~ 169 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS 169 (429)
T ss_pred eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh
Confidence 9999999999999989999999999999999999999763 357999999999987544
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCcc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWV 646 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~ 646 (736)
. ..+.+|++.|||||++....|+.|+|+||+|+|||+|++|+.||+..
T Consensus 170 ~---a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 170 M---AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred H---HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 3 56789999999999999999999999999999999999999999844
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=310.95 Aligned_cols=239 Identities=22% Similarity=0.264 Sum_probs=194.0
Q ss_pred HHHhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCc---ccccHHHHHHHHHHHhcCCCCceeeEEE-EEEeCCe-E
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGD---LHQGEEVFWAEVSTIGKIYHMNLVRMWG-FCSEGRH-R 532 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~ 532 (736)
...+.|.+.++||+|+||+|||+. +.+|..+|.|.++- ..+..+....|+.+|++|+|||||++++ .+.++.. .
T Consensus 16 ~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl 95 (375)
T KOG0591|consen 16 KTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL 95 (375)
T ss_pred ccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence 345678889999999999999999 77899999999964 2345567889999999999999999998 5555555 8
Q ss_pred EEEEecCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcC--------------------CCccEEcccCcc
Q 041821 533 LLIYEYVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHD--------------------EFEPKIADFGLA 588 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~--------------------~~~~kl~DFGla 588 (736)
+||||||..|+|.+.+++ .+.++++.+++++.|+++||.++|.. ++.+||+|||++
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhH
Confidence 999999999999998864 34799999999999999999999972 337899999999
Q ss_pred cccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHH
Q 041821 589 KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKI 668 (736)
Q Consensus 589 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (736)
+++...... ....+|||.||+||.+.+.+|+.||||||+||++|||+.-++||.... + ....+++
T Consensus 176 r~l~s~~tf--A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n---------~----~~L~~KI 240 (375)
T KOG0591|consen 176 RFLSSKTTF--AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN---------L----LSLCKKI 240 (375)
T ss_pred hHhcchhHH--HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc---------H----HHHHHHH
Confidence 998765432 456899999999999999999999999999999999999999998431 1 1122232
Q ss_pred hhhccccccccccCccCCCCC-HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 669 LYEEEAWIEEIVDPRLKGKFN-TNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 669 ~~~~~~~~~~~~d~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
..++ . .+.| ...+..+..||..|+..||+.||+...+++.+...
T Consensus 241 ~qgd-----------~-~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~~ 285 (375)
T KOG0591|consen 241 EQGD-----------Y-PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQSE 285 (375)
T ss_pred HcCC-----------C-CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHHH
Confidence 2222 1 1123 45677889999999999999999976666666553
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=327.68 Aligned_cols=225 Identities=27% Similarity=0.361 Sum_probs=191.7
Q ss_pred cccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCHh
Q 041821 466 FKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLD 545 (736)
Q Consensus 466 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 545 (736)
-.+-||.|+-|.||+|++. ++.||||+++..+ ..+|+-|++|+||||+.|.|+|.....++||||||+.|-|.
T Consensus 128 ELeWlGSGaQGAVF~Grl~-netVAVKKV~elk------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhhccCcccceeeeecc-CceehhHHHhhhh------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 3567999999999999984 6899999885432 36889999999999999999999999999999999999999
Q ss_pred hhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceeecccccCcc
Q 041821 546 KHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGY 609 (736)
Q Consensus 546 ~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y 609 (736)
+.|+...++.......+..+||.||.|||.+.+ .+||+|||.++..... .....+.||..|
T Consensus 201 ~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STkMSFaGTVaW 277 (904)
T KOG4721|consen 201 EVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STKMSFAGTVAW 277 (904)
T ss_pred HHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh---hhhhhhhhhHhh
Confidence 999999999999999999999999999996532 6899999999876554 235568899999
Q ss_pred cChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCC
Q 041821 610 MAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFN 689 (736)
Q Consensus 610 ~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 689 (736)
||||++.+.+.++|+||||||||||||+||..|+....... .+--+-...+.-..+
T Consensus 278 MAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA------------------------IIwGVGsNsL~LpvP 333 (904)
T KOG4721|consen 278 MAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA------------------------IIWGVGSNSLHLPVP 333 (904)
T ss_pred hCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe------------------------eEEeccCCcccccCc
Confidence 99999999999999999999999999999999986432110 022233344455667
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 690 TNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 690 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
..+++.+.=|+++||+..|..||++++|+.||+-.
T Consensus 334 stcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 334 STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 77888899999999999999999999999999754
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-38 Score=338.59 Aligned_cols=243 Identities=25% Similarity=0.380 Sum_probs=201.5
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCC----CcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 531 (736)
||..+...+.++||.|.||+|++|+++. ...||||.++.. .+.+.+|+.|+.||.+++||||++|-|+....+.
T Consensus 625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~P 704 (996)
T KOG0196|consen 625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKP 704 (996)
T ss_pred hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCce
Confidence 4556666777899999999999999653 457999999864 4556789999999999999999999999999999
Q ss_pred EEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRG 594 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~ 594 (736)
.+||+|||++|+|+.+|+.+. .+++.+...++++||.||.||-+. +...|++|||+++.+.++
T Consensus 705 vMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccC
Confidence 999999999999999998754 799999999999999999998643 447899999999988665
Q ss_pred CCcceeeccc--ccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 595 SNSSQFSQIR--GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 595 ~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
.... .+..- -..+|.|||.+....++.+||||||||+|||.++ |.+|+-.... . .
T Consensus 785 ~~~~-ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN-Q--------d------------ 842 (996)
T KOG0196|consen 785 PEAA-YTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-Q--------D------------ 842 (996)
T ss_pred CCcc-ccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch-H--------H------------
Confidence 5222 22222 3479999999999999999999999999999776 8888753321 0 1
Q ss_pred ccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 672 EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 672 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
+..-+...++-+.|.+++..|.+||+.|||+|-.+||.+.+|+.+|+++..
T Consensus 843 ----VIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 843 ----VIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred ----HHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 222334455566788899999999999999999999999999999998753
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-38 Score=321.51 Aligned_cols=251 Identities=20% Similarity=0.258 Sum_probs=194.8
Q ss_pred HHhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcccccHHH--HHHHHHHHhcCC-CCceeeEEEEEEeCC-eEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV--FWAEVSTIGKIY-HMNLVRMWGFCSEGR-HRLL 534 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~--~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~l 534 (736)
...+|.+.++||.|.||.||+|+ ...+..||||++++.-...++ -++|++.|++|+ |||||++.+++.+.+ .+++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 45789999999999999999999 666899999999875444433 478999999998 999999999999888 9999
Q ss_pred EEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCc
Q 041821 535 IYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~ 597 (736)
|||||+ .+|.++++++. .+++..++.|+.||++||+|+|.+++ .+||+|||+||.+.....
T Consensus 88 VfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP- 165 (538)
T KOG0661|consen 88 VFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPP- 165 (538)
T ss_pred eHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCC-
Confidence 999996 89999998765 79999999999999999999998754 579999999998876554
Q ss_pred ceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH----HHHhhhc
Q 041821 598 SQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK----RKILYEE 672 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 672 (736)
.+..+.|.+|+|||++.. ..|+.+.||||+|||++|+.+-++.|....+-+ .+..+..-+- +.+..+.
T Consensus 166 --YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D-----qi~KIc~VLGtP~~~~~~eg~ 238 (538)
T KOG0661|consen 166 --YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID-----QIYKICEVLGTPDKDSWPEGY 238 (538)
T ss_pred --cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH-----HHHHHHHHhCCCccccchhHH
Confidence 677889999999999764 569999999999999999999999998654322 1111111100 0000000
Q ss_pred c-----c-cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 673 E-----A-WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 673 ~-----~-~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. . .+.+.....+..-.+ ....++++|+.+|++.||.+||||.+++++
T Consensus 239 ~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 0 0 011111111111122 266789999999999999999999999986
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=353.09 Aligned_cols=246 Identities=28% Similarity=0.400 Sum_probs=198.0
Q ss_pred HHHHHhhhhcccccCeeceeEEEEeeeCC--C----cEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEe
Q 041821 457 AELKKSTKSFKEELGRGGSGAVYKGVLAD--G----RAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE 528 (736)
Q Consensus 457 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~--~----~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 528 (736)
.++.....++.+.||+|.||.||+|+..+ + ..||||.+++. .+...+|++|..+|++++|||||+++|+|.+
T Consensus 687 p~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~ 766 (1025)
T KOG1095|consen 687 PEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD 766 (1025)
T ss_pred ccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence 34556777888899999999999999544 3 34999999764 4566789999999999999999999999999
Q ss_pred CCeEEEEEecCCCCCHhhhcccC-------CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEccc
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSS-------YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADF 585 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~-------~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DF 585 (736)
....+|++|||++|+|..+|++. ..++..+.+.++.|||+|+.||+++++ .+||+||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEccc
Confidence 99999999999999999999875 268999999999999999999997643 7899999
Q ss_pred CcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHH
Q 041821 586 GLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREV 664 (736)
Q Consensus 586 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 664 (736)
|+|+.+...+.........-..+|||||.+.+..|+.|+|||||||+|||++| |..|+..... . ++
T Consensus 847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n-~-----~v------- 913 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-F-----EV------- 913 (1025)
T ss_pred chhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch-H-----HH-------
Confidence 99996655443322222233469999999999999999999999999999999 5666653221 0 00
Q ss_pred HHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 665 KRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 665 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
+...+... +-+.|..++..+.+||.+||+.+|++||++..|++.+..+...
T Consensus 914 -----------~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 914 -----------LLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred -----------HHHHHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 01011111 3345777889999999999999999999999999998887543
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=319.97 Aligned_cols=244 Identities=29% Similarity=0.394 Sum_probs=196.9
Q ss_pred cHHHHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe
Q 041821 455 SYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 455 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 531 (736)
.+.||..+...+.+.||+|+||+||+|++. -.||||.++.. .+..+.|++|+.++++-+|.||+-+.|+|..+..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 456777788888999999999999999974 47999999653 3455789999999999999999999999999887
Q ss_pred EEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRG 594 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~ 594 (736)
.||+.+|++.+|..+|+... .++..+.+.|+.|||+||.|||.+ +.++||+||||+..-..-
T Consensus 463 -AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w 541 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW 541 (678)
T ss_pred -eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeee
Confidence 99999999999999998755 799999999999999999999965 358999999999654332
Q ss_pred CCcceeecccccCcccChhccc---CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 595 SNSSQFSQIRGTKGYMAPEWAS---NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
..........|...|||||++. ..+|+..+||||||+++|||++|.-|+.....+.
T Consensus 542 ~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq--------------------- 600 (678)
T KOG0193|consen 542 SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ--------------------- 600 (678)
T ss_pred ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh---------------------
Confidence 2222344566889999999986 4579999999999999999999999987322111
Q ss_pred ccccccccccCc-cCC---CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 672 EEAWIEEIVDPR-LKG---KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 672 ~~~~~~~~~d~~-~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
+.-++-.. +.. ....++..++.+|+..||..++++||.+.+|+..|+.+..
T Consensus 601 ----IifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 601 ----IIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ----eEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 11111111 111 1234566789999999999999999999999999988766
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-37 Score=326.76 Aligned_cols=246 Identities=28% Similarity=0.385 Sum_probs=194.2
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCC--C---cEEEEEEeCc----ccccHHHHHHHHHHHhcCCCCceeeEEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD--G---RAVAVKRLGD----LHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE 528 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~--~---~~vavK~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 528 (736)
+|..++..+.++||+|+||+||+|++.. + ..||||..+. ......+|++|+++|++++|||||+++|++..
T Consensus 153 el~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~ 232 (474)
T KOG0194|consen 153 ELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL 232 (474)
T ss_pred EEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC
Confidence 4555666677999999999999999543 2 2389999874 23456789999999999999999999999999
Q ss_pred CCeEEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCccccc
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLS 591 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~ 591 (736)
..+++||||+|+||+|.++|+..+ .++..++..++.+.|.||+|||+++ ..+||+|||+++.-
T Consensus 233 ~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 233 EEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred CCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCC
Confidence 999999999999999999999877 5999999999999999999999652 35799999998754
Q ss_pred CCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhh
Q 041821 592 QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILY 670 (736)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (736)
..... ......-...|+|||.+....|+.++|||||||++||+++ |..|+..... ..+..++
T Consensus 313 ~~~~~--~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~-------------~~v~~kI-- 375 (474)
T KOG0194|consen 313 SQYVM--KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN-------------YEVKAKI-- 375 (474)
T ss_pred cceee--ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH-------------HHHHHHH--
Confidence 31111 1112234679999999999999999999999999999999 7788764321 1122222
Q ss_pred hccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccc
Q 041821 671 EEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729 (736)
Q Consensus 671 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (736)
+....+...+...+..+..++.+||..+|++||+|.+|.+.|+.+....+
T Consensus 376 ---------~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 376 ---------VKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred ---------HhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 11222233344556777888889999999999999999999998866544
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=304.20 Aligned_cols=226 Identities=22% Similarity=0.205 Sum_probs=186.8
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
..+.+++.++||+|+||+|++++.+ +++.+|+|++++.. ...+...+|..+|.+++||.||+++-.|++.+.+||
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 4467788999999999999999954 48999999997643 234667899999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
|+||+.||.|..+|.+++.+++..++-++.+|+.||.|||+.+ ++++|+|||+++.......
T Consensus 103 Vld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~-- 180 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD-- 180 (357)
T ss_pred EEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCC--
Confidence 9999999999999999999999999999999999999999764 4889999999996544332
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
...+.+||+.|||||++.+..|+.++|.||+|+++|||++|.+||.... ..... +++..++
T Consensus 181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~---------~~~~~----~~I~~~k------ 241 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED---------VKKMY----DKILKGK------ 241 (357)
T ss_pred ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc---------HHHHH----HHHhcCc------
Confidence 2455899999999999999999999999999999999999999998442 11111 1211111
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP 712 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 712 (736)
....+.-......+++.+.|+.||++|.
T Consensus 242 ------~~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 242 ------LPLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred ------CCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 0111222456788899999999999995
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=315.85 Aligned_cols=230 Identities=25% Similarity=0.319 Sum_probs=194.2
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccH---HHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
+.|.+.+.||+|+||.||||+. .+.+.||+|.+.+....+ +.+.+|+++++.++|||||.+++.|+...+.++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 3577788999999999999994 458899999997755444 557899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|+.+ +|..+|.....++++.+..|+.|++.||.|||+. ++.+|++|||+|+.+.... ...+
T Consensus 82 ~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t--~vlt 158 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT--SVLT 158 (808)
T ss_pred hhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCc--eeee
Confidence 9986 9999999999999999999999999999999975 3478999999999876643 3467
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
.+.||+.|||||+..+.+|+..+|+||+|||+|||++|++||... .+..+++.+. . |
T Consensus 159 sikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~---------si~~Lv~~I~----~----------d 215 (808)
T KOG0597|consen 159 SIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR---------SITQLVKSIL----K----------D 215 (808)
T ss_pred eccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH---------HHHHHHHHHh----c----------C
Confidence 789999999999999999999999999999999999999999732 2223322221 1 1
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+ ...+......+..++...|+.||.+|.|..+++.|
T Consensus 216 ~---v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 216 P---VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred C---CCCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 1 12344667789999999999999999999998865
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=311.86 Aligned_cols=252 Identities=23% Similarity=0.281 Sum_probs=203.3
Q ss_pred HHHHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 456 YAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 456 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
..|+.+....|.++||+|-||+|.+++...+..||||+++... ....+|.+|+++|.+++|||||+++|+|..++.++
T Consensus 532 l~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 532 LVEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLC 611 (807)
T ss_pred hhhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchH
Confidence 3567788888999999999999999999778999999998643 44578999999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCC
Q 041821 534 LIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~ 595 (736)
+|+|||++|+|.+++..+. .+.-....+|+.||+.||+||.+- ++++||+|||+++.+-.+.
T Consensus 612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCC
Confidence 9999999999999998763 345666778999999999999642 5689999999999877766
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh--CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK--GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
......+.+-..+|||||.+..++++.++|||+||+++||+++ ..+|+....+ ...++........+.
T Consensus 692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~---------e~vven~~~~~~~~~- 761 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD---------EQVVENAGEFFRDQG- 761 (807)
T ss_pred ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH---------HHHHHhhhhhcCCCC-
Confidence 6555556677889999999999999999999999999999875 5677753321 122222211111110
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
...-...|..++..+.+++++||..|-++||+++++...|++..
T Consensus 762 --------~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 762 --------RQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred --------cceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 11112345667788999999999999999999999999998754
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=290.61 Aligned_cols=251 Identities=19% Similarity=0.268 Sum_probs=190.3
Q ss_pred hhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCcccc---cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 463 TKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQ---GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
.|+...++|+|+||.|||++.++ |+.||||++..+.+ -.+..++|+++|++++|+|+|.++.+|......+||+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 46667789999999999999654 99999999966543 235678999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
|+..-|.++=+....++.+....++.|+++|+.|+|+++ ..+||+|||+|+.+.... ...+.
T Consensus 83 ~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg--d~YTD 160 (396)
T KOG0593|consen 83 CDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG--DNYTD 160 (396)
T ss_pred cchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCc--chhhh
Confidence 987666655444557999999999999999999999763 368999999999887432 23677
Q ss_pred ccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHH-----hhhccccc
Q 041821 603 IRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKI-----LYEEEAWI 676 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 676 (736)
.+.|.+|+|||.+.+ ..|+..+||||+||++.||++|.+.|....+ ...+..+...+-..+ ......++
T Consensus 161 YVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SD-----iDQLy~I~ktLG~L~prhq~iF~~N~~F 235 (396)
T KOG0593|consen 161 YVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSD-----IDQLYLIRKTLGNLIPRHQSIFSSNPFF 235 (396)
T ss_pred hhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcch-----HHHHHHHHHHHcccCHHHHHHhccCCce
Confidence 899999999999987 6799999999999999999999999875432 112222211111100 01111122
Q ss_pred cccccCccCCC-----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGK-----FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.-+.-|..... --+....-+++++..||+.||.+|++.++++.|
T Consensus 236 ~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 236 HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 22222222211 122334578999999999999999999998864
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=315.98 Aligned_cols=233 Identities=24% Similarity=0.339 Sum_probs=194.0
Q ss_pred hhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcccccH-HHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGE-EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
..|.-.++||+|+-|.||.++ ..+++.||||++....+.. +-+.+|+.+|+..+|+|||.+++.+.-.+.+|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 345566789999999999999 6678999999998766554 45789999999999999999999999899999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceeecc
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
++|+|.+.+... .+++.++..|++++++||+|||.+ +..+||+|||++..+..... .....
T Consensus 353 ~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~--KR~Tm 429 (550)
T KOG0578|consen 353 EGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS--KRSTM 429 (550)
T ss_pred CCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC--ccccc
Confidence 999999988654 499999999999999999999965 34799999999998876554 35678
Q ss_pred cccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
+||+.|||||++....|++|+||||||++++||+-|.+||..... +..+ .. +...-.|.
T Consensus 430 VGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P--------lrAl-----yL--------Ia~ng~P~ 488 (550)
T KOG0578|consen 430 VGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP--------LRAL-----YL--------IATNGTPK 488 (550)
T ss_pred cCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh--------HHHH-----HH--------HhhcCCCC
Confidence 999999999999999999999999999999999999999874221 1111 01 11111222
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+ ..+...+..+.+++.+||+.|+++||++.|+|+|
T Consensus 489 l--k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 489 L--KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred c--CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 2 2355667789999999999999999999999986
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-36 Score=319.78 Aligned_cols=245 Identities=24% Similarity=0.343 Sum_probs=188.0
Q ss_pred HHHhhhhcccccCeeceeEEEEeee------CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeC
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEG 529 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 529 (736)
+..++|++.++||+|+||.||+|.. ..++.||||+++... ...+.+.+|+.+|.++ +||||++++++|...
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 4567788999999999999999973 235689999997532 3345688999999999 899999999988764
Q ss_pred -CeEEEEEecCCCCCHhhhcccC---------------------------------------------------------
Q 041821 530 -RHRLLIYEYVEKQSLDKHLFSS--------------------------------------------------------- 551 (736)
Q Consensus 530 -~~~~lv~e~~~~gsL~~~l~~~--------------------------------------------------------- 551 (736)
...++||||+++|+|.+++...
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 4578999999999999988642
Q ss_pred -----CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccccCccc
Q 041821 552 -----YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYM 610 (736)
Q Consensus 552 -----~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~ 610 (736)
.++++.++..++.||++||+|||+.+ ..+||+|||+++...............+++.||
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 243 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWM 243 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcccc
Confidence 24778889999999999999999763 368999999998664432222223345678899
Q ss_pred ChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCC
Q 041821 611 APEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFN 689 (736)
Q Consensus 611 aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 689 (736)
|||++.+..++.++|||||||++|||++ |..||...... .. +. .....+. . ...+
T Consensus 244 aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~-----~~---~~----~~~~~~~--------~----~~~~ 299 (338)
T cd05102 244 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN-----EE---FC----QRLKDGT--------R----MRAP 299 (338)
T ss_pred CcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc-----HH---HH----HHHhcCC--------C----CCCC
Confidence 9999999999999999999999999997 99998643211 00 11 1111110 0 0112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 690 TNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 690 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
...+..+.+|+.+||+.||++|||+.+|++.|+.+.++
T Consensus 300 ~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 300 ENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 23346788999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=309.60 Aligned_cols=232 Identities=23% Similarity=0.295 Sum_probs=194.7
Q ss_pred hhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
..|+-.+.||+|.||.||||. ...++.||+|++... ....+.+.+|+.+|..++|+||.++||.+..+..++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 345556899999999999999 455889999999653 34456788999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
|.+|++.+.|+....+++.++.-|+++++.||.|||.+ .+.+||+|||.+..+...... ..+
T Consensus 93 ~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r--r~t 170 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKR--RKT 170 (467)
T ss_pred hcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhc--ccc
Confidence 99999999998888789999999999999999999965 347899999999877665443 367
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
.+||+.|||||++....|+.|+||||||++.+||++|.+|+....+.. +.-++..
T Consensus 171 fvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr-------------------------vlflIpk 225 (467)
T KOG0201|consen 171 FVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR-------------------------VLFLIPK 225 (467)
T ss_pred ccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce-------------------------EEEeccC
Confidence 899999999999998899999999999999999999999987554321 2223332
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+.........+.+++..||+.||+.||+|.++++|
T Consensus 226 ~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 226 SAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred CCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 22223333556779999999999999999999999976
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=306.47 Aligned_cols=242 Identities=21% Similarity=0.319 Sum_probs=188.5
Q ss_pred cccccHHHHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccccc----HHHHHHHHHHHhcCCCCceeeEEEEE
Q 041821 451 FRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQG----EEVFWAEVSTIGKIYHMNLVRMWGFC 526 (736)
Q Consensus 451 ~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~ 526 (736)
.+.++..+|.... ...||+|+++.||+|.. +++.||||+++..... .+.+.+|+.+|++++||||++++|++
T Consensus 12 ~~~i~~~~i~~~~---~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~ 87 (283)
T PHA02988 12 IKCIESDDIDKYT---SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFI 87 (283)
T ss_pred ceecCHHHcCCCC---CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeE
Confidence 3445555552221 14699999999999998 6899999999764332 35678999999999999999999999
Q ss_pred Ee----CCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEccc
Q 041821 527 SE----GRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADF 585 (736)
Q Consensus 527 ~~----~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DF 585 (736)
.+ ....++||||+++|+|.+++.....+++..+..++.|++.||.|||+. +..+||+||
T Consensus 88 ~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~df 167 (283)
T PHA02988 88 IDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICH 167 (283)
T ss_pred EecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEccc
Confidence 77 356789999999999999998877899999999999999999999953 346899999
Q ss_pred CcccccCCCCCcceeecccccCcccChhcccC--CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHH
Q 041821 586 GLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN--LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVRE 663 (736)
Q Consensus 586 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 663 (736)
|+++...... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... ......
T Consensus 168 g~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~---------~~~~~~ 233 (283)
T PHA02988 168 GLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT---------KEIYDL 233 (283)
T ss_pred chHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH---------HHHHHH
Confidence 9998654321 23468899999999976 6799999999999999999999999974311 111111
Q ss_pred HHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 664 VKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 664 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
+. ........+...+..+.+++.+||+.||++|||+.||++.|+...
T Consensus 234 i~---------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 234 II---------------NKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HH---------------hcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 10 000111122234567899999999999999999999999998753
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=312.06 Aligned_cols=246 Identities=26% Similarity=0.359 Sum_probs=206.1
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCC---C--cEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD---G--RAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR 530 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~---~--~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 530 (736)
+|.++...+.+.||+|.||.||+|...+ | -.||||.-+.. ....+.|+.|..+|++++|||||+++|+|.+ .
T Consensus 385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~ 463 (974)
T KOG4257|consen 385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-Q 463 (974)
T ss_pred eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-c
Confidence 5667777888999999999999999433 3 35899988763 3456789999999999999999999999987 5
Q ss_pred eEEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCC
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQR 593 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~ 593 (736)
..|||||.++.|.|.++|+.++ .|+......++.||+.||+|||+.++ .+||+|||+++.+..
T Consensus 464 P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 7899999999999999998765 78899999999999999999997644 579999999999877
Q ss_pred CCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhc
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (736)
+.... .+...-...|||||.+...+|+.++|||-|||.+||++. |.+||.+....+
T Consensus 544 ~~yYk-aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD---------------------- 600 (974)
T KOG4257|consen 544 DAYYK-ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD---------------------- 600 (974)
T ss_pred cchhh-ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc----------------------
Confidence 65543 334445679999999999999999999999999999876 899998654321
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccccc
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEI 730 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 730 (736)
+.-.+...-+.+.|+.++..+..|+.+||.+||.+||.+.++...|+.+.++...
T Consensus 601 ---VI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qeek~ 655 (974)
T KOG4257|consen 601 ---VIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEEKI 655 (974)
T ss_pred ---eEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHhhh
Confidence 3333444445667889999999999999999999999999999999988765544
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=278.70 Aligned_cols=250 Identities=21% Similarity=0.270 Sum_probs=189.9
Q ss_pred hhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCccccc---HHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 462 STKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.+|.-.++||+|.||.||+|+ ..+|+.||||+++..+.. ....++|++.|+.++|+||+.++++|-+.+...||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 356677899999999999999 567999999999764432 3567899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCccee
Q 041821 538 YVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
||+ .+|...+++.. .++..+++.++.++++||+|||.+ +..+||+|||+|+.+...... .
T Consensus 82 fm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~--~ 158 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI--Q 158 (318)
T ss_pred ecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc--c
Confidence 997 79999998765 799999999999999999999965 447899999999988765543 3
Q ss_pred ecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc--c--
Q 041821 601 SQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA--W-- 675 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-- 675 (736)
+..+-|.+|+|||.+.+. .|+..+||||.|||+.||+.|.+-|....+ .+.+..+....-........+ .
T Consensus 159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD-----idQL~~If~~LGTP~~~~WP~~~~lp 233 (318)
T KOG0659|consen 159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD-----IDQLSKIFRALGTPTPDQWPEMTSLP 233 (318)
T ss_pred ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch-----HHHHHHHHHHcCCCCcccCccccccc
Confidence 344789999999998875 499999999999999999999887764332 222222211111000000000 0
Q ss_pred ----ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 676 ----IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 676 ----~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+...-.+.+.. .-+......++|+.+|+..||.+|+|++|+++|
T Consensus 234 dY~~~~~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 234 DYVKIQQFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cHHHHhcCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11111111111 223345567999999999999999999999876
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=302.75 Aligned_cols=251 Identities=23% Similarity=0.279 Sum_probs=189.4
Q ss_pred HHhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcccc---cHHHHHHHHHHHhcCCCCceeeEEEEEEeC--CeEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQ---GEEVFWAEVSTIGKIYHMNLVRMWGFCSEG--RHRL 533 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 533 (736)
....|+.+++||+|.||.||+|+ ..+|+.||+|++..... ...-..+||.||++|+||||++|.+...+. ..+|
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 34567778899999999999999 66799999999965432 224457999999999999999999998876 6899
Q ss_pred EEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCC
Q 041821 534 LIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~ 596 (736)
||+|||+ -+|..++.... .+++.+++.++.|++.||+|+|++ ++.+||+|||||++......
T Consensus 195 lVFeYMd-hDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~ 273 (560)
T KOG0600|consen 195 LVFEYMD-HDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS 273 (560)
T ss_pred EEEeccc-chhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCC
Confidence 9999997 68888887754 799999999999999999999965 34789999999998876654
Q ss_pred cceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
.. ++..+-|++|+|||++.+. .|+.++|+||.||||.||+.|++.+....+-+ .+..+.... -...+..|
T Consensus 274 ~~-~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEve-----Ql~kIfklc---GSP~e~~W 344 (560)
T KOG0600|consen 274 AP-YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVE-----QLHKIFKLC---GSPTEDYW 344 (560)
T ss_pred cc-cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHH-----HHHHHHHHh---CCCChhcc
Confidence 43 6777889999999999875 59999999999999999999999988654321 121111110 00000011
Q ss_pred c----c--ccccCccC--CC---CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 676 I----E--EIVDPRLK--GK---FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 676 ~----~--~~~d~~~~--~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
- . ....+... .. .-...+...++|+..+|..||.+|.|+.++++.
T Consensus 345 ~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 345 PVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred ccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 1 0 11111100 00 011123567889999999999999999998864
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-35 Score=296.79 Aligned_cols=245 Identities=21% Similarity=0.273 Sum_probs=192.4
Q ss_pred HHhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
....|++.++||.|.-++||+|+ .+.++.||||++.-.. ...+.+.+|++.|+.++||||++++..|..+..+|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 35678999999999999999999 6778999999996432 33578899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcc
Q 041821 537 EYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~ 598 (736)
.||.+||+.++++..- .+++..+..|++++++||.|||++ ++.+||+|||.+..+.......
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~ 183 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQ 183 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCcee
Confidence 9999999999998643 589999999999999999999965 4589999999987654433222
Q ss_pred --eeecccccCcccChhcccC--CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 599 --QFSQIRGTKGYMAPEWASN--LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 599 --~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.....+||+.|||||++.. ..|+.|+||||||++..||.+|..||....+. .-+ ..++....
T Consensus 184 ~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm--------kvL----l~tLqn~p-- 249 (516)
T KOG0582|consen 184 VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM--------KVL----LLTLQNDP-- 249 (516)
T ss_pred eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH--------HHH----HHHhcCCC--
Confidence 1256789999999999654 35999999999999999999999999754221 111 11111111
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
....-..+..+........+.+++..||+.||++|||+++++++
T Consensus 250 --p~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 250 --PTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred --CCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 00011111222233344588999999999999999999999875
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=312.27 Aligned_cols=250 Identities=23% Similarity=0.323 Sum_probs=206.6
Q ss_pred ccHHHHHHhhhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 454 FSYAELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 454 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
....|+.+.++....+||-|.||.||.|.++. .-.||||.++...-..++|++|+.+|+.|+|||+|+|+|+|.....+
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 35567778888888999999999999999765 67899999998888889999999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRG 594 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~ 594 (736)
|||+|||.+|+|.++|++.. .++.-..+.++.||+.||.||..++| .+||+||||++++..+
T Consensus 339 YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD 418 (1157)
T ss_pred EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCC
Confidence 99999999999999998754 56777788999999999999975533 6899999999998765
Q ss_pred CCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
.... .....-.+.|.|||.+....|+.|+|||+|||+||||.| |-.|+.... +. .
T Consensus 419 TYTA-HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid---------lS----q---------- 474 (1157)
T KOG4278|consen 419 TYTA-HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID---------LS----Q---------- 474 (1157)
T ss_pred ceec-ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc---------HH----H----------
Confidence 4322 222223578999999999999999999999999999998 555654221 11 1
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccc
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (736)
+-.++...++-..+..+++.+.+||+.||+.+|.+||++.||-+.+|.+..+..
T Consensus 475 --VY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sS 528 (1157)
T KOG4278|consen 475 --VYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSS 528 (1157)
T ss_pred --HHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcccc
Confidence 223344444555567788899999999999999999999999999998865544
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=302.29 Aligned_cols=239 Identities=26% Similarity=0.288 Sum_probs=185.8
Q ss_pred hhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC--eEEEEEec
Q 041821 463 TKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR--HRLLIYEY 538 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e~ 538 (736)
++...+.||+|+||.||++...+ |...|||.+.... ...+.+.+|+++|.+++|||||+++|...... .++|.|||
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence 45567789999999999999544 8999999986542 22466889999999999999999999854444 68999999
Q ss_pred CCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC-----------------CccEEcccCcccccCCC-CCcce
Q 041821 539 VEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE-----------------FEPKIADFGLAKLSQRG-SNSSQ 599 (736)
Q Consensus 539 ~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~-----------------~~~kl~DFGla~~~~~~-~~~~~ 599 (736)
+++|+|.+++.+.+ .+++..+..+..||++||+|||+++ ..+||+|||+++..... .....
T Consensus 98 ~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~ 177 (313)
T KOG0198|consen 98 APGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDS 177 (313)
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccc
Confidence 99999999998876 7999999999999999999999752 47899999999877641 11112
Q ss_pred eecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....||+.|||||++..+ ....++|||||||++.||+||++||..... .... +..
T Consensus 178 ~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~-----------~~~~------------~~~ 234 (313)
T KOG0198|consen 178 ELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFE-----------EAEA------------LLL 234 (313)
T ss_pred cccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcc-----------hHHH------------HHH
Confidence 3457899999999999963 234599999999999999999999873200 0000 000
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
+......+..+...+....+++.+|++.||++||||+++++|.--.
T Consensus 235 ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~ 280 (313)
T KOG0198|consen 235 IGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLK 280 (313)
T ss_pred HhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence 1111111244555667888999999999999999999999986443
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=284.54 Aligned_cols=219 Identities=25% Similarity=0.222 Sum_probs=186.5
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
.++++.+.||.|+||.|.+++. .+|..+|+|++++.. +..+...+|..+|+.+.||+++++++.+.+.+..+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 4567788999999999999994 458899999997643 33456789999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
||+++|.|..+|++.++++++.++-++.||+.||+|||+. ++.+||+|||+|+.+... +
T Consensus 124 eyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r-----T 198 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR-----T 198 (355)
T ss_pred eccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCc-----E
Confidence 9999999999999999999999999999999999999976 347899999999977542 5
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
.+.+||+.|+|||++...+|+.++|.|||||++|||+.|.+||....+ ..+.+++..
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-------------~~iY~KI~~---------- 255 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-------------IQIYEKILE---------- 255 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-------------HHHHHHHHh----------
Confidence 678999999999999999999999999999999999999999985432 112222222
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCC
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKR 711 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 711 (736)
.. -.+|......+.+|+...|+.|-.+|
T Consensus 256 -~~--v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 256 -GK--VKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred -Cc--ccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 22 23455566788899999999999999
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-35 Score=298.59 Aligned_cols=256 Identities=27% Similarity=0.356 Sum_probs=186.4
Q ss_pred hhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhc--CCCCceeeEEEEEEeCC----eEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGK--IYHMNLVRMWGFCSEGR----HRLLI 535 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~lv 535 (736)
...++.+.||+|+||.||||.+. ++.||||++.. +..+.|.+|-.|.+. ++|+||+++++.-.... .++||
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~--~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE--QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCH--HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 34567789999999999999984 59999999964 334556666666554 68999999999887666 88999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC-------------------------CCccEEcccCcccc
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-------------------------EFEPKIADFGLAKL 590 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~-------------------------~~~~kl~DFGla~~ 590 (736)
+||.++|+|.++|+.+ .++|....+|+..+++||+|||++ |++..|+|||+|..
T Consensus 287 t~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR 365 (534)
T ss_pred eeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence 9999999999999765 599999999999999999999964 45778999999999
Q ss_pred cCCCCCcceeecccccCcccChhcccCCC-Cc-----cccceechhHHHHHHHhCCCCCCccccCCcc--chhHHH--HH
Q 041821 591 SQRGSNSSQFSQIRGTKGYMAPEWASNLP-IT-----AKVDVYSYGVVILEMVKGIRLSNWVVEDGEG--QEAELK--RF 660 (736)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~--~~~~~~--~~ 660 (736)
+..+.........+||.+|||||++.+.. +. .+.||||+|.|||||+++..-++....++-. ....+. .-
T Consensus 366 ~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt 445 (534)
T KOG3653|consen 366 LEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPT 445 (534)
T ss_pred ecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCC
Confidence 88777766677799999999999998643 22 3799999999999999987655321110000 000000 01
Q ss_pred HHHHHHHHhhhccccccccccCccCCCCC-HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 661 VREVKRKILYEEEAWIEEIVDPRLKGKFN-TNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
...++..+ +.+-..|.+....- ...+..+.+.+..||..||+.|.|+.-|-+++.++..-.
T Consensus 446 ~e~mq~~V-------V~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 446 LEEMQELV-------VRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred HHHHHHHH-------HhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 11111111 11111122211111 123567889999999999999999999988887765433
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=315.65 Aligned_cols=243 Identities=28% Similarity=0.364 Sum_probs=186.5
Q ss_pred HHHHhhhhcccccCeeceeEEEEeee------CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE 528 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 528 (736)
++....+.+.+.||+|+||.||+|+. ..+..||||+++... ...+.+.+|+.+|+.+ +||||++++++|.+
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 44566788899999999999999973 235689999996533 3345688999999999 89999999999999
Q ss_pred CCeEEEEEecCCCCCHhhhcccCC--------------------------------------------------------
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSSY-------------------------------------------------------- 552 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~~-------------------------------------------------------- 552 (736)
++..++|||||++|+|.+++....
T Consensus 111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 999999999999999998885421
Q ss_pred -------------------CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 553 -------------------FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 553 -------------------~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
.+++..+..++.||++||.|||+.+ ..+||+|||+++........
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 4788899999999999999999763 25799999999876543322
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
.......++..|+|||++.+..++.++|||||||++|||++ |..||...... ..+.... ..+
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~--------~~~~~~~----~~~----- 333 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD--------SKFYKMI----KEG----- 333 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch--------HHHHHHH----HhC-----
Confidence 21222345678999999999999999999999999999998 77787532211 0111111 110
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.....+...+..+.+|+.+||+.||++|||+.+|+++|++.
T Consensus 334 -------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 334 -------YRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -------ccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 00011112245788999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-34 Score=300.90 Aligned_cols=246 Identities=24% Similarity=0.299 Sum_probs=184.5
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCC-----------------CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCcee
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLAD-----------------GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLV 520 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv 520 (736)
....|.+.++||+|+||.||+++..+ +..||+|.+.... .....+.+|+.+|.+++||||+
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCee
Confidence 45678889999999999999997532 3469999987532 3346789999999999999999
Q ss_pred eEEEEEEeCCeEEEEEecCCCCCHhhhcccCC-------------------CCCHHHHHHHHHHHHHHhhhhhcCCC---
Q 041821 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-------------------FLGWKERFKVALGTAKGLAYLHHDEF--- 578 (736)
Q Consensus 521 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-------------------~l~~~~~~~i~~~i~~gL~yLH~~~~--- 578 (736)
++++++.+.+..++||||+++|+|.+++.... .+++..+..++.||+.||.|||+.++
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~ 162 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHR 162 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 99999999999999999999999999885421 36788899999999999999997643
Q ss_pred -------------ccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhC--CCCC
Q 041821 579 -------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG--IRLS 643 (736)
Q Consensus 579 -------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg--~~p~ 643 (736)
.+||+|||+++.+.............++..|||||++....++.++||||||+++|||+++ ..||
T Consensus 163 dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~ 242 (304)
T cd05096 163 DLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPY 242 (304)
T ss_pred CcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCC
Confidence 6899999999866443322222334567899999999888899999999999999999975 4455
Q ss_pred CccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 644 NWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
..... .............. .... ....++..+..+.+++.+||+.||++|||+.+|.+.|++
T Consensus 243 ~~~~~---------~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 243 GELTD---------EQVIENAGEFFRDQ----GRQV-----YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CcCCH---------HHHHHHHHHHhhhc----cccc-----cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 42210 11111111111000 0000 001122344678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-35 Score=302.81 Aligned_cols=234 Identities=20% Similarity=0.218 Sum_probs=193.5
Q ss_pred hhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCccc----ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 535 (736)
.++.|.+.||+|+|++|++|+ ...++.+|||++.+.. ...+-+..|-.+|.+| .||.|++|+-.|++...+|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 457789999999999999999 5568999999997642 2234466788899999 899999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCc--
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNS-- 597 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~-- 597 (736)
+||+++|+|.++|++.+.+++..++.++.+|+.||+|||+. ++++||+|||.|+.+......
T Consensus 153 Le~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~ 232 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQE 232 (604)
T ss_pred EEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhcccc
Confidence 99999999999999999999999999999999999999965 558999999999988654332
Q ss_pred -------ce--eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHH
Q 041821 598 -------SQ--FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKI 668 (736)
Q Consensus 598 -------~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (736)
.. ....+||..|.+||++.+...++.+|+|+||||||.|+.|.+||....+. ..
T Consensus 233 ~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney---------li-------- 295 (604)
T KOG0592|consen 233 NPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY---------LI-------- 295 (604)
T ss_pred CccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH---------HH--------
Confidence 11 24589999999999999999999999999999999999999999854321 11
Q ss_pred hhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 669 LYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 669 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
+..+++-. -.+++..++.+.+|+.+.|..||.+|+|+.+|.+|.
T Consensus 296 -------FqkI~~l~--y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 296 -------FQKIQALD--YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred -------HHHHHHhc--ccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 11111111 123334446788999999999999999999998763
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-35 Score=299.98 Aligned_cols=232 Identities=29% Similarity=0.443 Sum_probs=178.2
Q ss_pred hcccccCeeceeEEEEeeeC-----CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 465 SFKEELGRGGSGAVYKGVLA-----DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 465 ~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
++.+.||.|.||.||+|++. .+..|+||.++... ...+.+.+|++.+++++||||++++|++.+.+..++|||
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 45678999999999999975 25789999996533 346789999999999999999999999998888999999
Q ss_pred cCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcce
Q 041821 538 YVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|+++|+|.++|... ..+++..+..|+.||++||.|||++ +..+||+|||+++..........
T Consensus 82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~ 161 (259)
T PF07714_consen 82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN 161 (259)
T ss_dssp --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999886 5799999999999999999999976 34789999999987743322222
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....+...|+|||.+.+..++.++||||||+++|||++ |+.|+.... ...+.. .+..+.
T Consensus 162 ~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~---------~~~~~~----~~~~~~------ 222 (259)
T PF07714_consen 162 DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD---------NEEIIE----KLKQGQ------ 222 (259)
T ss_dssp STTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC---------HHHHHH----HHHTTE------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc---------cccccc----cccccc------
Confidence 333457789999999998889999999999999999999 677765321 111111 111111
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
....+...+..+.+++.+||+.||++|||+.+|++.|
T Consensus 223 ------~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 223 ------RLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ------ETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ------cceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1112223456788999999999999999999999986
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=312.17 Aligned_cols=243 Identities=24% Similarity=0.335 Sum_probs=186.5
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeC
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEG 529 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 529 (736)
+....|.+.+.||+|+||.||+|+.. ++..||||+++... ...+.+.+|+.+++.+ +|+|||+++++|...
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 45667889999999999999998731 24579999997533 2345688999999999 899999999999999
Q ss_pred CeEEEEEecCCCCCHhhhcccC----------------------------------------------------------
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSS---------------------------------------------------------- 551 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~---------------------------------------------------------- 551 (736)
+..++||||+++|+|.+++...
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 9999999999999999987532
Q ss_pred ------------CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecc
Q 041821 552 ------------YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 552 ------------~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
.++++.++..++.||++||.|||+.+ ..+||+|||+++..............
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~ 274 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA 274 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC
Confidence 14788899999999999999999763 36899999999866443322112223
Q ss_pred cccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
.+++.|||||++.+..++.++|||||||++|||++ |+.||....... .+.... ..
T Consensus 275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~--------~~~~~~----~~------------ 330 (374)
T cd05106 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS--------KFYKMV----KR------------ 330 (374)
T ss_pred CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH--------HHHHHH----Hc------------
Confidence 45678999999998899999999999999999997 999986432110 010100 00
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
......+...+..+.+++.+||+.||++|||+.+|+++|+++.
T Consensus 331 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 331 GYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 0001111112457889999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=304.74 Aligned_cols=229 Identities=24% Similarity=0.302 Sum_probs=192.9
Q ss_pred hhcccccCeeceeEEEEee-eCCCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 464 KSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+++.+.||.|+-|.|-+|+ ..+|+.+|||++.+. ......+.+|+.+|+.|.|||++++|+++++..++|+|.||
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy 93 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY 93 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence 5677899999999999999 567999999999653 12234578999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+++|.|.++|.+.+++++.++.+++.||+.|+.|.|+.+ .++||+|||+|.+-..+.- ..+
T Consensus 94 v~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl---LeT 170 (786)
T KOG0588|consen 94 VPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL---LET 170 (786)
T ss_pred cCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCcc---ccc
Confidence 999999999999999999999999999999999999642 3699999999987655432 567
Q ss_pred ccccCcccChhcccCCCC-ccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 603 IRGTKGYMAPEWASNLPI-TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
.+|++.|.|||++.+.+| +.++||||.|||||.|++|+.||+.. .+..+...+.+ +.
T Consensus 171 SCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd---------Nir~LLlKV~~----G~--------- 228 (786)
T KOG0588|consen 171 SCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD---------NIRVLLLKVQR----GV--------- 228 (786)
T ss_pred cCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc---------cHHHHHHHHHc----Cc---------
Confidence 889999999999999998 56999999999999999999999822 23334333332 11
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
-.+|...+.++.+|+.+|+..||+.|.|++||++|-
T Consensus 229 ----f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 229 ----FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred ----ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 123445566788999999999999999999999983
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=303.25 Aligned_cols=234 Identities=22% Similarity=0.263 Sum_probs=190.4
Q ss_pred HHHhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcc-----c-ccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCC
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDL-----H-QGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGR 530 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~-----~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 530 (736)
.....|.+.+.||+|+||+|++|. ..+++.||||.+.+. . ...+.+.+|+.++++++ ||||++++.++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 345678889999999999999998 456899999977553 1 23455678999999999 999999999999999
Q ss_pred eEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------C-CccEEcccCcccccCC
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------E-FEPKIADFGLAKLSQR 593 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~-~~~kl~DFGla~~~~~ 593 (736)
..++||||+.+|+|.+++...+++.+.++..++.|++.|++|+|++ + .++||+|||++....
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~- 172 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP- 172 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC-
Confidence 9999999999999999999988999999999999999999999965 3 589999999999874
Q ss_pred CCCcceeecccccCcccChhcccCCC-Cc-cccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASNLP-IT-AKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
.........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+... ...+... +..+
T Consensus 173 -~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~---------~~~l~~k----i~~~ 238 (370)
T KOG0583|consen 173 -GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN---------VPNLYRK----IRKG 238 (370)
T ss_pred -CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc---------HHHHHHH----HhcC
Confidence 1122366788999999999999877 85 79999999999999999999998421 1111111 1111
Q ss_pred ccccccccccCccCCCCCHHH-HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 672 EEAWIEEIVDPRLKGKFNTNQ-AATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 672 ~~~~~~~~~d~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. + .++... ...+.+|+.+|++.||.+|+|+.+|+.+
T Consensus 239 ~-----------~--~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 239 E-----------F--KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred C-----------c--cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 1 0 112222 5678899999999999999999999954
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=291.43 Aligned_cols=235 Identities=23% Similarity=0.320 Sum_probs=186.7
Q ss_pred hhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
.++++.+.||+|+||.||+++..++..+|+|.+.......+.+.+|+.+|++++||||+++++++...+..++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 56788899999999999999988888999999876555567889999999999999999999999999999999999999
Q ss_pred CCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeeccc
Q 041821 542 QSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIR 604 (736)
Q Consensus 542 gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~ 604 (736)
|+|.+++... ..+++..+..++.|++.||.|||+.+ ..+||+|||+++......... .....
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~-~~~~~ 162 (256)
T cd05114 84 GCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS-SSGAK 162 (256)
T ss_pred CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceec-cCCCC
Confidence 9999998753 46899999999999999999999764 368999999998654322211 12234
Q ss_pred ccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 605 gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
++..|+|||++.+..++.++||||||+++|||++ |+.||..... ........ .+. ....
T Consensus 163 ~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~---------~~~~~~i~----~~~-----~~~~-- 222 (256)
T cd05114 163 FPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN---------YEVVEMIS----RGF-----RLYR-- 222 (256)
T ss_pred CchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH---------HHHHHHHH----CCC-----CCCC--
Confidence 5678999999988889999999999999999999 8888853211 11111111 110 0001
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
+......+.+++.+||+.+|++||++.++++.|.
T Consensus 223 -----~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 223 -----PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred -----CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1112357889999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-34 Score=309.99 Aligned_cols=245 Identities=23% Similarity=0.285 Sum_probs=189.2
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCC------CcEEEEEEeCccc--ccHHHHHHHHHHHhcCC-CCceeeEEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD------GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIY-HMNLVRMWGFCSE 528 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 528 (736)
++....+.+.+.||+|+||.||+|+... +..||||+++... ...+.+.+|+++|+++. ||||+++++++.+
T Consensus 33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 4456778889999999999999998421 3479999996533 33467899999999996 9999999999999
Q ss_pred CCeEEEEEecCCCCCHhhhcccC---------------------------------------------------------
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSS--------------------------------------------------------- 551 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~--------------------------------------------------------- 551 (736)
....+||||||++|+|.++|...
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 99999999999999999887532
Q ss_pred ---------------------------------------CCCCHHHHHHHHHHHHHHhhhhhcCC---------------
Q 041821 552 ---------------------------------------YFLGWKERFKVALGTAKGLAYLHHDE--------------- 577 (736)
Q Consensus 552 ---------------------------------------~~l~~~~~~~i~~~i~~gL~yLH~~~--------------- 577 (736)
..+++..+..++.||++||.|||+.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~ 272 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeC
Confidence 13778888999999999999999763
Q ss_pred -CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchh
Q 041821 578 -FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEA 655 (736)
Q Consensus 578 -~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~ 655 (736)
..+||+|||+++...............++..|||||.+.+..++.++|||||||++|||++ |..||.....+.
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~----- 347 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS----- 347 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH-----
Confidence 3689999999987644332222233456788999999998899999999999999999997 888886432110
Q ss_pred HHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 656 ELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
.+.. ....+ .....+...+..+.+++.+||+.||++||++.+|+++|+.+.+
T Consensus 348 ---~~~~----~~~~~------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 348 ---TFYN----KIKSG------------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred ---HHHH----HHhcC------------CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 0111 11100 0111122345678999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=287.24 Aligned_cols=232 Identities=21% Similarity=0.305 Sum_probs=194.9
Q ss_pred HHhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
...+|+|.+.||+|.||.|-++. ...|+.||||.++++. +..-.+.+|++||..|+||||++++.+|++.+.+.|
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 34678999999999999999999 5679999999997654 233457899999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~ 598 (736)
||||..+|.|.+++.+.+.|++.+++++++||..|+.|.|.+ +.++||+|||++.++..+..
T Consensus 131 vMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kf-- 208 (668)
T KOG0611|consen 131 VMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKF-- 208 (668)
T ss_pred EEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccH--
Confidence 999999999999999999999999999999999999999965 45899999999988765443
Q ss_pred eeecccccCcccChhcccCCCC-ccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPI-TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
..+++|++-|.+||++.+.+| ++.+|-||+||+||-|+.|..||+.. +..++++.+. .+
T Consensus 209 -LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~---------Dhk~lvrQIs----~G------ 268 (668)
T KOG0611|consen 209 -LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR---------DHKRLVRQIS----RG------ 268 (668)
T ss_pred -HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc---------hHHHHHHHhh----cc------
Confidence 567899999999999999998 57899999999999999999999843 2333333322 11
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
.+++ +..+....-||++||..||+.|.|+.+|..|-
T Consensus 269 -----aYrE---P~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 269 -----AYRE---PETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred -----cccC---CCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 1111 12233556789999999999999999999875
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-34 Score=296.35 Aligned_cols=239 Identities=26% Similarity=0.396 Sum_probs=188.9
Q ss_pred HhhhhcccccCeeceeEEEEeeeCC------CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLAD------GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
..++.+.+.||+|+||.||+|.... ...||+|.++... .....+.+|+.++++++||||+++++++.+....
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 3567889999999999999998533 2579999986533 3345689999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccC----------------CCCCHHHHHHHHHHHHHHhhhhhcCC----------------Ccc
Q 041821 533 LLIYEYVEKQSLDKHLFSS----------------YFLGWKERFKVALGTAKGLAYLHHDE----------------FEP 580 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~ 580 (736)
+++|||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ..+
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTV 163 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcE
Confidence 9999999999999998653 35788999999999999999999763 368
Q ss_pred EEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHH
Q 041821 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKR 659 (736)
Q Consensus 581 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~ 659 (736)
||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||..... ..
T Consensus 164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~---------~~ 234 (283)
T cd05048 164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN---------QE 234 (283)
T ss_pred EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH---------HH
Confidence 9999999986644332222334457889999999998889999999999999999998 9989864321 11
Q ss_pred HHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 660 FVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
... .+.. ......+...+..+.+|+.+||+.||++||++.+|+++|+++
T Consensus 235 ~~~----~i~~------------~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 235 VIE----MIRS------------RQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHH----HHHc------------CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 111 1111 111122334567899999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=293.58 Aligned_cols=240 Identities=22% Similarity=0.301 Sum_probs=187.5
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC----CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
|....+.+.+.||+|+||.||+|.+. .+..||+|.++... .....+.+|+.++++++||||+++++++..++..
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 45567889999999999999999843 35689999997542 3345788999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
++||||+++|+|.+++... ..+++..++.++.|++.||+|||+.+ ..+||+|||.+.......
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 9999999999999998764 47899999999999999999999763 368999999876543221
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.. ......++..|+|||.+.+..++.++|||||||++||+++ |..||..... ...... +..+
T Consensus 162 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~---------~~~~~~----~~~~--- 224 (266)
T cd05064 162 IY-TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG---------QDVIKA----VEDG--- 224 (266)
T ss_pred hh-cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH---------HHHHHH----HHCC---
Confidence 11 1122345678999999999999999999999999999775 9999863311 011111 1110
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.....+...+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 225 ---------~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 225 ---------FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ---------CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 01112233456788999999999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=299.48 Aligned_cols=232 Identities=21% Similarity=0.292 Sum_probs=193.1
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe-EEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH-RLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ 536 (736)
+.|...+.+|+|+||.++..+.+ +++.+++|.+.... ..++...+|+.++++++|||||.+++.+..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 46788899999999999999843 57899999996432 334567899999999999999999999998888 89999
Q ss_pred ecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc
Q 041821 537 EYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
+||+||+|.+.|.+.+ .++++.+..++.|++.|+.|||+++ -.+||+|||+|+.+.....
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~-- 161 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS-- 161 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchh--
Confidence 9999999999998755 6899999999999999999999642 2679999999999877652
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....+||+.||.||++.+.+|+.|+|||||||++|||++-+++|.... ...++..+.+
T Consensus 162 ~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~---------m~~Li~ki~~------------ 220 (426)
T KOG0589|consen 162 LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN---------MSELILKINR------------ 220 (426)
T ss_pred hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc---------hHHHHHHHhh------------
Confidence 2567889999999999999999999999999999999999999997432 2222222211
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......+......+..++..|++.+|+.||++.+++.+
T Consensus 221 ----~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 221 ----GLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ----ccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 11233455667789999999999999999999999976
|
|
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=290.61 Aligned_cols=240 Identities=25% Similarity=0.321 Sum_probs=191.3
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
|....+.+.++||+|+||.||+|...+++.||+|.+.......+.+.+|+.++++++|+||+++++.+.+.+..+++|||
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 3 IPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred CchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 45567889999999999999999987888999999876555567889999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 539 VEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 539 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
+++++|.+++... ..+++..+..++.|+++||+|||+.+ ..+||+|||+++......... .
T Consensus 83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~-~ 161 (261)
T cd05072 83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA-R 161 (261)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceec-c
Confidence 9999999998653 36889999999999999999999763 368999999998765432211 2
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....++..|+|||.+....++.++|||||||++|||++ |..||..... ....... ...
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---------~~~~~~~----~~~-------- 220 (261)
T cd05072 162 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN---------SDVMSAL----QRG-------- 220 (261)
T ss_pred CCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH---------HHHHHHH----HcC--------
Confidence 23346778999999988889999999999999999998 8888853210 0111111 000
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
... ......+..+.+++.+||+.+|++||+++++.+.|+++
T Consensus 221 ~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 221 YRM----PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCC----CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 000 11112345788999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=289.41 Aligned_cols=241 Identities=24% Similarity=0.349 Sum_probs=192.3
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
++...++++.+.||+|+||.||+|...+++.||||.++......+++.+|+.++++++||||+++++++...+..++|||
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 2 EIDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred ccchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 35567788999999999999999998778899999997665566779999999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 538 YVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|+++++|.+++.... .+++..+..++.|++.||.|||+.+ ..+||+|||+++........ .
T Consensus 82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~-~ 160 (261)
T cd05068 82 LMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE-A 160 (261)
T ss_pred cccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc-c
Confidence 999999999997644 6899999999999999999999763 36899999999876532211 1
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
......+..|+|||++.+..++.++||||||+++|||++ |+.||..... ........ .
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---------~~~~~~~~----~-------- 219 (261)
T cd05068 161 REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN---------AEVLQQVD----Q-------- 219 (261)
T ss_pred cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH---------HHHHHHHH----c--------
Confidence 122223458999999998899999999999999999999 8888853210 01111110 0
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
......+...+..+.+++.+|++.+|++||++.+|++.|++.
T Consensus 220 ----~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 220 ----GYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ----CCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 000111223456789999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=298.76 Aligned_cols=183 Identities=23% Similarity=0.251 Sum_probs=159.4
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
|....|++.+.||+|+||.||+++.. ++..+|+|.+.... ...+.+.+|+++|++++||||+++++++..++..++|
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 34567888999999999999999954 58899999986532 3346789999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEcccCcccccCCCCCcc
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~~~~~~~~~~ 598 (736)
|||+++++|.+++.....+++..+..++.|++.||.|||+. +..+||+|||+++......
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 158 (331)
T cd06649 82 MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 158 (331)
T ss_pred eecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccc---
Confidence 99999999999998877899999999999999999999964 2368999999997654321
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNW 645 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~ 645 (736)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 -~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 159 -ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred -cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 2345689999999999998999999999999999999999999963
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=298.10 Aligned_cols=235 Identities=18% Similarity=0.175 Sum_probs=186.9
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.|.+.+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|+.++..++||||+++++++.+++..+||||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 4678899999999999999965 48899999996532 234568899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|+++++|.+++.....+++..+..++.|++.||.|||+.+ ..+||+|||+++.... ...
T Consensus 82 ~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-----~~~ 156 (333)
T cd05600 82 YVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-----YAN 156 (333)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-----ccC
Confidence 9999999999988778999999999999999999999763 3689999999986543 134
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.. ....+.
T Consensus 157 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~---------~~~~~~i~~---------~~~~~~ 218 (333)
T cd05600 157 SVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP---------NETWENLKY---------WKETLQ 218 (333)
T ss_pred CcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH---------HHHHHHHHh---------cccccc
Confidence 46799999999999998999999999999999999999999864321 011111110 000111
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...........+..+.+++.+||+.+|++||++.+++++
T Consensus 219 ~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 219 RPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 100000012335678899999999999999999999987
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=289.93 Aligned_cols=242 Identities=23% Similarity=0.257 Sum_probs=189.7
Q ss_pred HhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcccc---------------cHHHHHHHHHHHhcCCCCceeeEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQ---------------GEEVFWAEVSTIGKIYHMNLVRMWG 524 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~---------------~~~~~~~E~~~l~~l~h~niv~l~~ 524 (736)
..+|++.+.||+|.||.|-+|+ ..+++.||||++.+... ..+...+|+.+|++++|||||+|+.
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 3568889999999999999999 45689999999954221 1146789999999999999999999
Q ss_pred EEEe--CCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccC
Q 041821 525 FCSE--GRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFG 586 (736)
Q Consensus 525 ~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFG 586 (736)
+..+ .+.+|||+|||..|.+...-.....+++.+++.|++++..||+|||.+ +.++||+|||
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFG 255 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFG 255 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccc
Confidence 9876 457899999999998876543333499999999999999999999965 3478999999
Q ss_pred cccccCCCC---CcceeecccccCcccChhcccCCC----CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHH
Q 041821 587 LAKLSQRGS---NSSQFSQIRGTKGYMAPEWASNLP----ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKR 659 (736)
Q Consensus 587 la~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~ 659 (736)
.+.....+. ........+||+.|||||.+.++. .+.+.||||+||+||.|+.|+.||.....
T Consensus 256 Vs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~----------- 324 (576)
T KOG0585|consen 256 VSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE----------- 324 (576)
T ss_pred eeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH-----------
Confidence 998663331 112345578999999999988632 35689999999999999999999974321
Q ss_pred HHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 660 FVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
... ...++...+.-...++..+.+.+||+++|.+||++|.+..+|..|..-..+
T Consensus 325 --~~l-----------~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 325 --LEL-----------FDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred --HHH-----------HHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 111 233333444333344567889999999999999999999999988765443
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=333.03 Aligned_cols=250 Identities=26% Similarity=0.485 Sum_probs=187.7
Q ss_pred ccHHHHHHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 454 FSYAELKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 454 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
+++.++.. .+...+.||+|+||.||+|+. .++..||||+++...... ..|++++++++|||||+++|+|.+.+..
T Consensus 683 ~~~~~~~~-~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---~~~~~~l~~l~HpnIv~~~~~~~~~~~~ 758 (968)
T PLN00113 683 ITINDILS-SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP---SSEIADMGKLQHPNIVKLIGLCRSEKGA 758 (968)
T ss_pred hhHHHHHh-hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcccc---HHHHHHHhhCCCCCcceEEEEEEcCCCC
Confidence 45555543 345567899999999999995 578999999986543222 3568899999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC--------CC-----------ccEEcccCcccccCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD--------EF-----------EPKIADFGLAKLSQR 593 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~--------~~-----------~~kl~DFGla~~~~~ 593 (736)
++||||+++|+|.++++. ++|.++.+|+.||++||+|||++ ++ .+++. ||.+.....
T Consensus 759 ~lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~ 834 (968)
T PLN00113 759 YLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT 834 (968)
T ss_pred EEEEeCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc
Confidence 999999999999999963 89999999999999999999943 11 22332 444332211
Q ss_pred CCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
.....||+.|||||++.+..++.++|||||||++|||++|+.||+...... .....+.........
T Consensus 835 ------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~-------~~~~~~~~~~~~~~~- 900 (968)
T PLN00113 835 ------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVH-------GSIVEWARYCYSDCH- 900 (968)
T ss_pred ------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCC-------CcHHHHHHHhcCccc-
Confidence 122367899999999999999999999999999999999999985432211 112222222211111
Q ss_pred ccccccccCccCC--CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 674 AWIEEIVDPRLKG--KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 674 ~~~~~~~d~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
....+|+.+.. ..+..+..++.+++.+||+.||++||||+||+++|+++...
T Consensus 901 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 901 --LDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred --hhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 33445555433 24556777899999999999999999999999999988653
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=289.06 Aligned_cols=240 Identities=22% Similarity=0.312 Sum_probs=190.0
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
+....+.+.++||+|+||.||+|... .++.||+|.++......+.+.+|++++++++||||+++++++..+...+++||
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 82 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence 34556788899999999999999954 48899999997665556778999999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 538 YVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|+++++|.+++.... .+++..++.++.|+++||+|||+.+ ..+||+|||++..........
T Consensus 83 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~- 161 (263)
T cd05052 83 FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA- 161 (263)
T ss_pred eCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeec-
Confidence 999999999986533 6899999999999999999999763 368999999998765432211
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....++..|+|||.+.+..++.++|||||||++|||++ |..|+..... .... .....
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~---------~~~~----~~~~~-------- 220 (263)
T cd05052 162 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---------SQVY----ELLEK-------- 220 (263)
T ss_pred cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---------HHHH----HHHHC--------
Confidence 112234668999999998899999999999999999998 8888753210 1111 11110
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
......+...+..+.+++.+||+.||++|||+.+++++|+.+
T Consensus 221 ----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 221 ----GYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ----CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 011112223346788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=287.72 Aligned_cols=236 Identities=22% Similarity=0.306 Sum_probs=187.5
Q ss_pred HhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
...|.+.+.||+|+||.||+|+..++..+|||.+.......+.+.+|+.++++++||||+++++++.+....++||||++
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 45678899999999999999998777789999997655556779999999999999999999999999999999999999
Q ss_pred CCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecc
Q 041821 541 KQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 541 ~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
+++|.+++... ..+++..++.++.||+.||.|||+.+ ..+||+|||+++........ .....
T Consensus 83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~-~~~~~ 161 (256)
T cd05113 83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT-SSVGS 161 (256)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCcee-ecCCC
Confidence 99999998764 36899999999999999999999753 36899999999866443221 12223
Q ss_pred cccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
.++..|+|||.+.+..++.++|||||||++|||++ |..||..... ..... ...... .
T Consensus 162 ~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---------~~~~~----~~~~~~--------~- 219 (256)
T cd05113 162 KFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN---------SETVE----KVSQGL--------R- 219 (256)
T ss_pred ccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH---------HHHHH----HHhcCC--------C-
Confidence 45678999999988889999999999999999998 8888753211 00111 111100 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
...+......+.+++.+||+.+|.+||++.+|++.|+
T Consensus 220 ---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 220 ---LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ---CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0111123467899999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=292.13 Aligned_cols=233 Identities=23% Similarity=0.250 Sum_probs=183.1
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
+|...+.||+|+||.||++.. .+++.||||.+.... .....+.+|+.++++++|+||+++++++.+++..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 356778999999999999994 568999999986432 233457899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 538 YVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|+++|+|..++... ..+++..+..++.|++.||+|||+.+ ..+||+|||++........
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 157 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET--- 157 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe---
Confidence 99999999887543 36899999999999999999999753 3689999999987543221
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.....||+.|||||++.+..++.++|||||||++|||++|+.||........ . .........
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-----~----~~~~~~~~~--------- 219 (285)
T cd05631 158 VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-----R----EEVDRRVKE--------- 219 (285)
T ss_pred ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-----H----HHHHHHhhc---------
Confidence 3345799999999999999999999999999999999999999974322110 0 011111000
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT-----MDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 720 (736)
. ....+...+..+.+|+.+||+.||++||+ +++++++
T Consensus 220 --~--~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 220 --D--QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred --c--cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 0 01122233457888999999999999997 8888875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-34 Score=297.77 Aligned_cols=227 Identities=22% Similarity=0.185 Sum_probs=184.7
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.|++.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+....++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 4678899999999999999954 58999999986432 234568899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|+++|+|.+++.....+++..+..++.|++.||+|||+.+ ..+||+|||+++..... ..
T Consensus 82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-----~~ 156 (291)
T cd05612 82 YVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-----TW 156 (291)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC-----cc
Confidence 9999999999988778999999999999999999999763 36899999999866432 22
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..... .+..+.
T Consensus 157 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~---------~~~~~----~i~~~~--------- 214 (291)
T cd05612 157 TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP---------FGIYE----KILAGK--------- 214 (291)
T ss_pred cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHH----HHHhCC---------
Confidence 35689999999999998899999999999999999999999864211 01111 111110
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPT-----MDSVVQS 720 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 720 (736)
..++......+.+++.+||+.||.+||+ +.++++|
T Consensus 215 ----~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 215 ----LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ----cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 0112223457889999999999999995 8888876
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=298.61 Aligned_cols=225 Identities=22% Similarity=0.210 Sum_probs=180.8
Q ss_pred cccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCC
Q 041821 468 EELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 542 (736)
+.||+|+||.||+++. .+++.||||+++... .....+.+|+.++++++||||+++++++...+..+|||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999995 468999999996532 23356788999999999999999999999999999999999999
Q ss_pred CHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeeccccc
Q 041821 543 SLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGT 606 (736)
Q Consensus 543 sL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt 606 (736)
+|.+++.....+++..+..++.||+.||+|||+.+ ..+||+|||+++....... ......||
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt 158 (323)
T cd05571 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGT 158 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC--cccceecC
Confidence 99999988788999999999999999999999764 3689999999975432221 13446799
Q ss_pred CcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCC
Q 041821 607 KGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKG 686 (736)
Q Consensus 607 ~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 686 (736)
+.|||||++.+..++.++|||||||++|||++|+.||..... ...... +... + .
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~---------~~~~~~----~~~~---------~----~ 212 (323)
T cd05571 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---------EKLFEL----ILME---------E----I 212 (323)
T ss_pred ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH---------HHHHHH----HHcC---------C----C
Confidence 999999999999999999999999999999999999863210 011111 0000 0 0
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 687 KFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 687 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
.++......+.+++.+||+.||++|| ++.++++|
T Consensus 213 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 213 RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 12223456788999999999999999 79999865
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=306.98 Aligned_cols=237 Identities=24% Similarity=0.339 Sum_probs=196.2
Q ss_pred hcccccCeeceeEEEEee-eCCC----cEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 465 SFKEELGRGGSGAVYKGV-LADG----RAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 465 ~~~~~lG~G~fg~Vy~~~-~~~~----~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
...++||+|+||+||+|. .+.+ .+||||++... .+..++++.|+-+|.+++||||++|+|+|.... +.||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 345689999999999998 4544 47999998653 345688999999999999999999999998876 889999
Q ss_pred cCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCccee
Q 041821 538 YVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~ 600 (736)
||+.|.|.++++.++ .+..+..+.+..|||+||.|||+++. .+||+|||+|+.+..+......
T Consensus 778 ~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~ 857 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSA 857 (1177)
T ss_pred hcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccc
Confidence 999999999998755 89999999999999999999997643 6799999999999887666545
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....-.+.|||-|.+....|+.++|||||||++||++| |.+|++.... +. +.++
T Consensus 858 ~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~-------------~e------------I~dl 912 (1177)
T KOG1025|consen 858 PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA-------------EE------------IPDL 912 (1177)
T ss_pred cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH-------------HH------------hhHH
Confidence 55555679999999999999999999999999999998 7888764321 11 2233
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
+....+-+.|+.+..++..++.+||..|+..||+++++...+.+...+
T Consensus 913 le~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 913 LEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred HhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 333334456778889999999999999999999999999888776443
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=299.66 Aligned_cols=229 Identities=23% Similarity=0.206 Sum_probs=185.4
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
...|.+.+.||+|+||.||+|+.. +++.||||.++... ...+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 356788999999999999999954 58899999996532 2345688999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|||+++|+|.+++.....+++..+..++.||+.||+|||+.+ ..+||+|||+++.....
T Consensus 97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----- 171 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR----- 171 (329)
T ss_pred EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC-----
Confidence 999999999999988878999999999999999999999763 37899999999866432
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ... .+.+..+.
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~---------~~~----~~~i~~~~------- 231 (329)
T PTZ00263 172 TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP---------FRI----YEKILAGR------- 231 (329)
T ss_pred cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH---------HHH----HHHHhcCC-------
Confidence 2235699999999999999999999999999999999999999863210 011 11111110
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT-----MDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 720 (736)
+ ..+......+.+++.+||+.||++||+ +.+++.|
T Consensus 232 ----~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 232 ----L--KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred ----c--CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 0 111223456789999999999999996 6888766
|
|
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=299.62 Aligned_cols=245 Identities=26% Similarity=0.369 Sum_probs=187.5
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEEEe-
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE- 528 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~- 528 (736)
+..++|++.+.||+|+||.||+|... .++.||+|+++... ...+.+.+|+.++.++ +|+||++++++|..
T Consensus 4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 34567899999999999999999732 24789999986532 2345678899999999 89999999998865
Q ss_pred CCeEEEEEecCCCCCHhhhcccC---------------------------------------------------------
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSS--------------------------------------------------------- 551 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~--------------------------------------------------------- 551 (736)
+...+++|||+++++|.+++...
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 45678999999999999888532
Q ss_pred ----CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceeecccccCcccC
Q 041821 552 ----YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611 (736)
Q Consensus 552 ----~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~a 611 (736)
..+++..+..++.||+.||+|||+.++ .+||+|||+++.+.............++..|||
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 257899999999999999999997633 589999999987644332222333456788999
Q ss_pred hhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCH
Q 041821 612 PEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNT 690 (736)
Q Consensus 612 PE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 690 (736)
||++.+..++.++|||||||++|||++ |..||...... .. +.. ...... ....+.
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~-----~~---~~~----~~~~~~------------~~~~~~ 299 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID-----EE---FCR----RLKEGT------------RMRAPE 299 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc-----HH---HHH----HHhccC------------CCCCCc
Confidence 999999999999999999999999998 98888642211 00 111 111000 011122
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 691 NQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 691 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
.....+.+++.+||+.+|++||++.||+++|+.+.++
T Consensus 300 ~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 300 YATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 2345788999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=272.11 Aligned_cols=236 Identities=22% Similarity=0.269 Sum_probs=192.8
Q ss_pred HHhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCc---ccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGD---LHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
..+.|++.++||+|.|+.||++. .+.|+.+|+|++.. .....+++.+|++|.+.|+|||||++.+.+.+....|||
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 34667888999999999999998 56689999998853 334667889999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCcccccCCCCC
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~~~~~~~~ 596 (736)
+|+|.+++|..-|-.+...++..+-..+.||+.+|.|.|.+++ -+||+|||+|..+..+.
T Consensus 89 Fe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~- 167 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE- 167 (355)
T ss_pred EecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcc-
Confidence 9999999998877666678899999999999999999998754 57999999999887332
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
.....+|||+|||||++...+|+..+|||+-||+||-|+.|.+||.... ..++.+.+. .+.
T Consensus 168 --~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~---------~~rlye~I~----~g~---- 228 (355)
T KOG0033|consen 168 --AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED---------QHRLYEQIK----AGA---- 228 (355)
T ss_pred --ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc---------HHHHHHHHh----ccc----
Confidence 2567889999999999999999999999999999999999999997421 122222221 111
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
--+++ +.-+...+...+|+.+||..||.+|.|+.|.++|
T Consensus 229 -yd~~~----~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 229 -YDYPS----PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred -cCCCC----cccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 01111 1223445678899999999999999999999876
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=291.79 Aligned_cols=250 Identities=19% Similarity=0.237 Sum_probs=185.2
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+|++.+.||+|+||.||+++.. +++.||||+++... ...+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 4778899999999999999964 57899999986532 2345678999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
++++.+..+......+++..+..++.|++.||.|||+.+ ..+||+|||+++........ ....
T Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~ 160 (287)
T cd07848 82 VEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNA-NYTE 160 (287)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccc-cccc
Confidence 998877766555557999999999999999999999763 36899999999876443221 1334
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHH-------HHHHHHhhhcccc
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR-------EVKRKILYEEEAW 675 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 675 (736)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........ ....... .. ..
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~-~~ 233 (287)
T cd07848 161 YVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEI-----DQLFTIQKVLGPLPAEQMKLFY-SN-PR 233 (287)
T ss_pred cccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHhhCCCCHHHHHhhh-cc-ch
Confidence 57899999999999888999999999999999999999999743211 11111000 0000000 00 00
Q ss_pred ccccccCccCC------CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 676 IEEIVDPRLKG------KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 676 ~~~~~d~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......+.... ......+..+.+++.+||+.||++|||++++++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000011100 0111234579999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=301.03 Aligned_cols=227 Identities=24% Similarity=0.275 Sum_probs=185.5
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 532 (736)
+....+.+.++||+|+||+|+++..+ +++.+|||.+++. ....+..+.|.+|+.... ||.|+.++.+|+..+++
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 34456788999999999999999954 5889999999874 344567888999888875 99999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~ 596 (736)
+.||||+.||++.. +.+...+++..+.-++..|+.||.|||++++ .+||+|||+++.......
T Consensus 445 ~fvmey~~Ggdm~~-~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~ 523 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMH-HIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGD 523 (694)
T ss_pred EEEEEecCCCcEEE-EEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCC
Confidence 99999999999443 3344579999999999999999999998743 789999999986543322
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
.+.+.+||+.|||||++.+..|+.++|.|||||+||||+.|..||....++ +. +
T Consensus 524 --~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe-----e~-------------------F 577 (694)
T KOG0694|consen 524 --RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE-----EV-------------------F 577 (694)
T ss_pred --ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH-----HH-------------------H
Confidence 367899999999999999999999999999999999999999999854321 11 1
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM 714 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 714 (736)
..++.. ...+|...+.+.+.++.++|..+|++|.-+
T Consensus 578 dsI~~d--~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 578 DSIVND--EVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHhcC--CCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 111111 123455667788899999999999999855
|
|
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=290.75 Aligned_cols=239 Identities=24% Similarity=0.370 Sum_probs=187.4
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCC------CcEEEEEEeCcccc--cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLAD------GRAVAVKRLGDLHQ--GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 531 (736)
...+|.+.+.||+|+||.||+|+..+ ++.||||.++.... ..+.+.+|+++|++++|+||+++++++.....
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 45678889999999999999998533 47899999976433 35679999999999999999999999999999
Q ss_pred EEEEEecCCCCCHhhhcccC--------------CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccE
Q 041821 532 RLLIYEYVEKQSLDKHLFSS--------------YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPK 581 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~--------------~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~k 581 (736)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ..+|
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~k 162 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVK 162 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEE
Confidence 99999999999999998653 24788999999999999999999753 3689
Q ss_pred EcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHH
Q 041821 582 IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRF 660 (736)
Q Consensus 582 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~ 660 (736)
|+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||..... ...
T Consensus 163 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~---------~~~ 233 (280)
T cd05049 163 IGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN---------EEV 233 (280)
T ss_pred ECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH---------HHH
Confidence 999999986543322111223346788999999999999999999999999999998 9988863211 011
Q ss_pred HHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 661 VREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
.... ..+. ....+...+..+.+++.+||+.||++||++.||++.|++
T Consensus 234 ~~~~----~~~~------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 234 IECI----TQGR------------LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHH----HcCC------------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1111 1110 011122334678899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=293.94 Aligned_cols=223 Identities=21% Similarity=0.222 Sum_probs=178.1
Q ss_pred cCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 470 LGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 470 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
||+|+||.||+++.. +++.||+|+++.. ......+.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999954 5789999998642 23345678899999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccccCc
Q 041821 545 DKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGTKG 608 (736)
Q Consensus 545 ~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~ 608 (736)
.+++.....+++..+..++.||++||.|||+.+ ..+||+|||+++....... ......||+.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~ 158 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD--KTNTFCGTPE 158 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC--ccccccCCcc
Confidence 999988778999999999999999999999763 3689999999986433222 2345679999
Q ss_pred ccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCC
Q 041821 609 YMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKF 688 (736)
Q Consensus 609 y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 688 (736)
|+|||++.+..++.++|||||||++|||++|+.||..... .... +..... . ...
T Consensus 159 y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~---------~~~~----~~~~~~-----------~--~~~ 212 (312)
T cd05585 159 YLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV---------NEMY----RKILQE-----------P--LRF 212 (312)
T ss_pred cCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH---------HHHH----HHHHcC-----------C--CCC
Confidence 9999999999999999999999999999999999963210 1111 111110 0 112
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCC---HHHHHHH
Q 041821 689 NTNQAATLIGIGISCVDEDRSKRPT---MDSVVQS 720 (736)
Q Consensus 689 ~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~ 720 (736)
+......+.+++.+||+.||++||+ +.+++.+
T Consensus 213 ~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 213 PDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 2233457889999999999999975 6777654
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=268.60 Aligned_cols=244 Identities=21% Similarity=0.259 Sum_probs=193.9
Q ss_pred HHhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC-----eE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR-----HR 532 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 532 (736)
...+|.+.+.||+|||+.||+++ ..+++.+|+|++.... +..+..++|++..++++||||++++++...+. ..
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 45678999999999999999999 7789999999997655 56678899999999999999999999875433 48
Q ss_pred EEEEecCCCCCHhhhcccC----CCCCHHHHHHHHHHHHHHhhhhhcC------------------CCccEEcccCcccc
Q 041821 533 LLIYEYVEKQSLDKHLFSS----YFLGWKERFKVALGTAKGLAYLHHD------------------EFEPKIADFGLAKL 590 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~i~~gL~yLH~~------------------~~~~kl~DFGla~~ 590 (736)
||+++|...|+|.+.+... ..+++.+.+.|+.+|++||++||+. ...++|.|||.+..
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 9999999999999988642 3799999999999999999999965 24789999999976
Q ss_pred cCCCCCcc-------eeecccccCcccChhccc---CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHH
Q 041821 591 SQRGSNSS-------QFSQIRGTKGYMAPEWAS---NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRF 660 (736)
Q Consensus 591 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~ 660 (736)
....-... .......|..|+|||.+. +...++++|||||||+||+|+.|..||+.....+.
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg--------- 249 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG--------- 249 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC---------
Confidence 54321111 112245789999999986 45578999999999999999999999975443222
Q ss_pred HHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 661 VREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
+....+..+.+.-......++.+.+++.+|++.||.+||++.+++..++.+.
T Consensus 250 -------------SlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 250 -------------SLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred -------------eEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1122333333332223336789999999999999999999999999998753
|
|
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=284.00 Aligned_cols=239 Identities=26% Similarity=0.349 Sum_probs=190.4
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
+|..++|++.++||+|+||.||+|..++++.||+|.+.......+.+.+|+.++++++|+||+++++++. .+..+++||
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 80 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITE 80 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEE
Confidence 4667889999999999999999999888899999999876666678999999999999999999999874 456899999
Q ss_pred cCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 538 YVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|+++++|.+++... ..+++.++..++.|++.||+|||+.+ ..++|+|||++......... .
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-~ 159 (260)
T cd05067 81 YMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT-A 159 (260)
T ss_pred cCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc-c
Confidence 99999999998653 36899999999999999999999753 36899999999876532221 1
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....++..|+|||++....++.++||||||+++|||++ |+.||..... ....... ...
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---------~~~~~~~----~~~------- 219 (260)
T cd05067 160 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN---------PEVIQNL----ERG------- 219 (260)
T ss_pred ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh---------HHHHHHH----HcC-------
Confidence 223346778999999998889999999999999999999 9999863211 0111111 000
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
.....+...+..+.+++.+||+.+|++||+++++++.|+.
T Consensus 220 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 220 -----YRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 0011122234578999999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=289.72 Aligned_cols=239 Identities=24% Similarity=0.366 Sum_probs=185.5
Q ss_pred HHhhhhcccccCeeceeEEEEeee-----CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVL-----ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
+..++++.+.||+|+||.||+|.. ..+..||+|.+.... .....+.+|+.++++++||||+++++++..+...
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence 346778889999999999999983 246789999997533 2335788999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccC-----------------CCCCHHHHHHHHHHHHHHhhhhhcCC----------------Cc
Q 041821 533 LLIYEYVEKQSLDKHLFSS-----------------YFLGWKERFKVALGTAKGLAYLHHDE----------------FE 579 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~-----------------~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~ 579 (736)
++||||+++++|.+++... ..+++.+...++.|++.||.|||+++ ..
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCc
Confidence 9999999999999988522 24788899999999999999999763 36
Q ss_pred cEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHH
Q 041821 580 PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELK 658 (736)
Q Consensus 580 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~ 658 (736)
+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||..... .
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~---------~ 233 (283)
T cd05090 163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN---------Q 233 (283)
T ss_pred EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH---------H
Confidence 89999999987644332222333446778999999988889999999999999999998 8888753210 0
Q ss_pred HHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 659 RFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
....... .......+...+..+.+++.+||+.||++||++.+|+++|.+
T Consensus 234 ~~~~~~~----------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 234 EVIEMVR----------------KRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHH----------------cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1111110 000011122334678889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=284.01 Aligned_cols=235 Identities=24% Similarity=0.315 Sum_probs=185.8
Q ss_pred hhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
.++.+.+.||+|+||.||++..+.+..+|+|.+.........+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 45778899999999999999987777899999876555566788999999999999999999999999999999999999
Q ss_pred CCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeeccc
Q 041821 542 QSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIR 604 (736)
Q Consensus 542 gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~ 604 (736)
++|.+++... ..+++..+..++.|++.||+|||+.+ ..+||+|||+++......... .....
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~ 162 (256)
T cd05059 84 GCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS-SQGTK 162 (256)
T ss_pred CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccc-cCCCC
Confidence 9999998753 36899999999999999999999763 368999999998664322111 11222
Q ss_pred ccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 605 gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ...... ... ...
T Consensus 163 ~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---------~~~~~~----~~~--------~~~-- 219 (256)
T cd05059 163 FPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN---------SEVVES----VSA--------GYR-- 219 (256)
T ss_pred CCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH---------HHHHHH----HHc--------CCc--
Confidence 4568999999998899999999999999999999 7888763211 001111 110 001
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
...+...+..+.+++.+||+.+|++|||+.+|++.|.
T Consensus 220 --~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 220 --LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred --CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 1112224567899999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=302.03 Aligned_cols=245 Identities=23% Similarity=0.301 Sum_probs=188.2
Q ss_pred HHHHHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCC-CCceeeEEEEEE
Q 041821 457 AELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIY-HMNLVRMWGFCS 527 (736)
Q Consensus 457 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 527 (736)
.++....+.+.++||+|+||.||+|+.. .+..||||+++... ...+.+.+|+.+|.++. |||||++++++.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 4566777888899999999999999853 24689999997542 22356889999999997 999999999999
Q ss_pred eCCeEEEEEecCCCCCHhhhcccCC-------------------------------------------------------
Q 041821 528 EGRHRLLIYEYVEKQSLDKHLFSSY------------------------------------------------------- 552 (736)
Q Consensus 528 ~~~~~~lv~e~~~~gsL~~~l~~~~------------------------------------------------------- 552 (736)
..+..++||||+++|+|.++++...
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 9999999999999999999885421
Q ss_pred -------------------------------------------CCCHHHHHHHHHHHHHHhhhhhcCC------------
Q 041821 553 -------------------------------------------FLGWKERFKVALGTAKGLAYLHHDE------------ 577 (736)
Q Consensus 553 -------------------------------------------~l~~~~~~~i~~~i~~gL~yLH~~~------------ 577 (736)
.+++..+..++.||++||.|||+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiL 271 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVL 271 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEE
Confidence 3567788899999999999999763
Q ss_pred ----CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCcc
Q 041821 578 ----FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEG 652 (736)
Q Consensus 578 ----~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~ 652 (736)
..+||+|||+++...............+++.|||||.+.+..++.++|||||||++|||++ |+.||......
T Consensus 272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~--- 348 (401)
T cd05107 272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN--- 348 (401)
T ss_pred EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch---
Confidence 3679999999986543322111223457789999999998889999999999999999998 88887532110
Q ss_pred chhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 653 QEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
. .... ... .......+...+..+.+++.+||+.+|++||++++|++.|+++.
T Consensus 349 --~---~~~~----~~~------------~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 349 --E---QFYN----AIK------------RGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred --H---HHHH----HHH------------cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 0 0000 000 00111112233467889999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-33 Score=272.42 Aligned_cols=250 Identities=22% Similarity=0.190 Sum_probs=185.2
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccH---HHHHHHHHHHhcCCCCceeeEEEEEEe--CCeEEEEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMWGFCSE--GRHRLLIY 536 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 536 (736)
.|+....|++|.||.||+|+. ++++.||+|+++-..... -.-++||.+|.+++|||||.+-.+... -+.+||||
T Consensus 77 efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VM 156 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVM 156 (419)
T ss_pred HHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeH
Confidence 456677899999999999994 458999999997543221 235799999999999999999988754 45799999
Q ss_pred ecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcce
Q 041821 537 EYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|||+ .+|..++..-+ ++...+++.++.|+++||+|||++ .+.+||+|||+|+.+.... ..
T Consensus 157 e~~E-hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~--k~ 233 (419)
T KOG0663|consen 157 EYVE-HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL--KP 233 (419)
T ss_pred HHHH-hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc--cc
Confidence 9997 68888887654 799999999999999999999964 4578999999999887653 23
Q ss_pred eecccccCcccChhcccCCC-CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc---
Q 041821 600 FSQIRGTKGYMAPEWASNLP-ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW--- 675 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 675 (736)
++..+-|.+|+|||++.+.+ |++++|+||+|||+.||+++++.|....+- ..+..+....-..-......+
T Consensus 234 ~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~-----dQl~~If~llGtPte~iwpg~~~l 308 (419)
T KOG0663|consen 234 YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI-----DQLDKIFKLLGTPSEAIWPGYSEL 308 (419)
T ss_pred CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH-----HHHHHHHHHhCCCccccCCCcccc
Confidence 67788999999999998765 999999999999999999999998855432 222222221110000000000
Q ss_pred -------ccccccCccCCCCCHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 676 -------IEEIVDPRLKGKFNTN-QAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 676 -------~~~~~d~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+..-..++..+... ..+.-.+|+..+|..||.+|.|++|.+++
T Consensus 309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 0000001112222222 34667889999999999999999999876
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=284.95 Aligned_cols=239 Identities=26% Similarity=0.353 Sum_probs=187.6
Q ss_pred HhhhhcccccCeeceeEEEEeeeCC----CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
.+.+.+.+.||+|+||.||+|+... ...||||.++... .....+.+|+.++++++||||+++++++.+.+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 4567888999999999999998642 4579999986533 334678899999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 535 IYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
||||+++++|.+++.... .+++..+..++.|++.||.|||+.+ ..+||+|||+++........
T Consensus 83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd05033 83 ITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT 162 (266)
T ss_pred EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccc
Confidence 999999999999987643 6899999999999999999999764 36899999999877532222
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
.......++..|+|||.+.+..++.++||||||+++|||++ |..||.... . ..+.... ...
T Consensus 163 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~------~---~~~~~~~----~~~----- 224 (266)
T cd05033 163 YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS------N---QDVIKAV----EDG----- 224 (266)
T ss_pred eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC------H---HHHHHHH----HcC-----
Confidence 22223345678999999998889999999999999999998 888875321 0 1111111 100
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.....+...+..+.+++.+||+.+|++||++.+|+++|+++
T Consensus 225 -------~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 225 -------YRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00011223346788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-33 Score=285.79 Aligned_cols=238 Identities=25% Similarity=0.368 Sum_probs=191.5
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccc-cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQ-GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
....|.+.++||+|+||.||+|...+++.+|+|.+..... ....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 3466888999999999999999987799999999976543 456788999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 539 VEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 539 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
+++++|.+++... ..+++..+..++.||+.||.|||+.+ ..+||+|||++......... .
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~--~ 161 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL--S 161 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcccc--c
Confidence 9999999999763 36899999999999999999999763 36799999999876443221 2
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....++..|+|||.+....++.++||||||+++|||++ |+.||..... ........
T Consensus 162 ~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~---------~~~~~~~~-------------- 218 (261)
T cd05148 162 SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN---------HEVYDQIT-------------- 218 (261)
T ss_pred cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH---------HHHHHHHH--------------
Confidence 23446778999999998889999999999999999998 7888853210 01111110
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.......+...+..+.+++.+||+.||++|||+.++++.|+++
T Consensus 219 --~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 219 --AGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred --hCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 0111112234456788999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-33 Score=294.15 Aligned_cols=244 Identities=23% Similarity=0.291 Sum_probs=188.0
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC-CCc----EEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA-DGR----AVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 531 (736)
+...+|+..+.||+|+||.||+|++. +++ .||||.++... ...+++.+|+.+++.++||||++++|+|... .
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~ 82 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T 82 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-C
Confidence 34567888899999999999999853 333 48999986432 3456788999999999999999999999875 5
Q ss_pred EEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRG 594 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~ 594 (736)
.++++||+++|+|.+++.... .+++..+..++.||++||+|||+.+ ..+||+|||+++.....
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCC
Confidence 679999999999999997644 6899999999999999999999763 36899999999877654
Q ss_pred CCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
..........++..|+|||++.+..++.++|||||||++|||++ |+.||.... ... +... ...
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~------~~~---~~~~----~~~--- 226 (316)
T cd05108 163 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP------ASE---ISSI----LEK--- 226 (316)
T ss_pred CcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC------HHH---HHHH----HhC---
Confidence 33222223345678999999999999999999999999999998 888886321 011 1110 000
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
......+......+.+++.+||+.+|++||++.+++.+|..+..+.
T Consensus 227 ---------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 227 ---------GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred ---------CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 0001111223456888999999999999999999999998876544
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=296.86 Aligned_cols=231 Identities=21% Similarity=0.185 Sum_probs=186.0
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCC--CcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLAD--GRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
+....|.+.+.||+|+||.||+|.... +..||+|++.... ...+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 27 ~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~ 106 (340)
T PTZ00426 27 MKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYL 106 (340)
T ss_pred CChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEE
Confidence 345678899999999999999998543 3689999986432 2345678999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~ 596 (736)
++||||+++|+|.+++.....+++..+..++.|++.||.|||+.+ ..+||+|||+++.....
T Consensus 107 ~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~-- 184 (340)
T PTZ00426 107 YLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR-- 184 (340)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC--
Confidence 999999999999999988888999999999999999999999753 36899999999876432
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
.....||+.|||||++.+..++.++|||||||++|||++|+.||..... ..... .+..+.
T Consensus 185 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~---------~~~~~----~i~~~~---- 244 (340)
T PTZ00426 185 ---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP---------LLIYQ----KILEGI---- 244 (340)
T ss_pred ---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH---------HHHHH----HHhcCC----
Confidence 2345799999999999988899999999999999999999999963211 00111 111110
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
..++......+.+++.+|++.||++|+ ++++++++
T Consensus 245 ---------~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 245 ---------IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 011222335678899999999999995 89999876
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=282.77 Aligned_cols=238 Identities=26% Similarity=0.351 Sum_probs=188.0
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+..++|++.++||+|+||.||+|...++..+|+|.+.......+.+.+|+.++++++|+||+++++++. ....+++|||
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY 81 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence 455678899999999999999999878888999999776556677999999999999999999999885 4567899999
Q ss_pred CCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCccee
Q 041821 539 VEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 539 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~ 600 (736)
+++++|.+++... ..+++..+..++.|++.||.|||+.++ .+||+|||++.......... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~-~ 160 (260)
T cd05070 82 MSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA-R 160 (260)
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccccc-c
Confidence 9999999998753 358999999999999999999997643 67999999998764432211 1
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....++..|+|||.+.+..++.++||||||+++|||++ |..||..... ....... ..
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---------~~~~~~~----~~--------- 218 (260)
T cd05070 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN---------REVLEQV----ER--------- 218 (260)
T ss_pred cCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH---------HHHHHHH----Hc---------
Confidence 22345678999999988889999999999999999999 8888853210 0111111 00
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
......+...+..+.+++.+|++.+|++|||+.++++.|++
T Consensus 219 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 219 ---GYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---CCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 00111222344678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=293.29 Aligned_cols=225 Identities=24% Similarity=0.230 Sum_probs=180.4
Q ss_pred cccCeeceeEEEEeee-CCCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCC
Q 041821 468 EELGRGGSGAVYKGVL-ADGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 542 (736)
+.||+|+||.||+++. .+++.||||++... ......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999994 46899999999653 223456788999999999999999999999999999999999999
Q ss_pred CHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeeccccc
Q 041821 543 SLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGT 606 (736)
Q Consensus 543 sL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt 606 (736)
+|..++.....+++.++..++.||+.||+|||+.+ ..+||+|||+++....... ......||
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt 158 (328)
T cd05593 81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA--TMKTFCGT 158 (328)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCccc--ccccccCC
Confidence 99999987778999999999999999999999763 3689999999875432211 23446799
Q ss_pred CcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCC
Q 041821 607 KGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKG 686 (736)
Q Consensus 607 ~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 686 (736)
+.|+|||++.+..++.++|||||||++|||++|+.||..... ..... ..... +.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~---------~~~~~----~~~~~---------~~---- 212 (328)
T cd05593 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---------EKLFE----LILME---------DI---- 212 (328)
T ss_pred cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH---------HHHHH----HhccC---------Cc----
Confidence 999999999988999999999999999999999999963211 00111 10000 00
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 687 KFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 687 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
..+......+.+++.+||+.||++|| ++.+++++
T Consensus 213 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 213 KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 11223345788999999999999997 89999876
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=289.56 Aligned_cols=238 Identities=17% Similarity=0.145 Sum_probs=186.1
Q ss_pred HHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
..+++++...||+|+||.||+++. .+|..+|+|+++++. ...+.++.|-.+|...++|.||+|+-.|++.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 445677788999999999999994 459999999998754 334567889999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCC----
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRG---- 594 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~---- 594 (736)
||||.+||++..+|...+.|++..++.++.+++.||.-||+. .+++||+||||+.-+...
T Consensus 219 iMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~ 298 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIE 298 (550)
T ss_pred EEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhh
Confidence 999999999999999999999999999999999999999965 348899999998533210
Q ss_pred -------------------CCc----c------------------eeecccccCcccChhcccCCCCccccceechhHHH
Q 041821 595 -------------------SNS----S------------------QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVI 633 (736)
Q Consensus 595 -------------------~~~----~------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl 633 (736)
... . .....+|||.|||||++.+..|+..+|.||+|||+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Im 378 (550)
T KOG0605|consen 299 SYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIM 378 (550)
T ss_pred hhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHH
Confidence 000 0 01125799999999999999999999999999999
Q ss_pred HHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC
Q 041821 634 LEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT 713 (736)
Q Consensus 634 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 713 (736)
|||+.|-+||....+. +....+..|-. .+ .-| .......+..+||.+|+. ||++|.-
T Consensus 379 yEmLvGyPPF~s~tp~-----~T~rkI~nwr~-~l-----------~fP-----~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 379 YEMLVGYPPFCSETPQ-----ETYRKIVNWRE-TL-----------KFP-----EEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHhCCCCCCCCCHH-----HHHHHHHHHhh-hc-----------cCC-----CcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 9999999999854321 11222222211 11 111 111223678899999998 9999964
Q ss_pred ---HHHHHHH
Q 041821 714 ---MDSVVQS 720 (736)
Q Consensus 714 ---~~evl~~ 720 (736)
+.||.+|
T Consensus 436 ~~G~~EIK~H 445 (550)
T KOG0605|consen 436 SKGAEEIKKH 445 (550)
T ss_pred cccHHHHhcC
Confidence 6777654
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=288.39 Aligned_cols=244 Identities=23% Similarity=0.347 Sum_probs=190.2
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
+...+.+.+.||+|+||.||+|+.. ++..+++|.+.... ...+.+.+|+.++++++|+||+++++++...+..
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL 82 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCce
Confidence 3456778889999999999999742 34569999986544 3346788999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCC----------------CCCHHHHHHHHHHHHHHhhhhhcCC----------------Ccc
Q 041821 533 LLIYEYVEKQSLDKHLFSSY----------------FLGWKERFKVALGTAKGLAYLHHDE----------------FEP 580 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~ 580 (736)
++||||+++++|.+++.... .+++..+..++.||+.||+|||+++ ..+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~ 162 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLV 162 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence 99999999999999986432 3789999999999999999999764 368
Q ss_pred EEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHH
Q 041821 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKR 659 (736)
Q Consensus 581 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~ 659 (736)
||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ..
T Consensus 163 ~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---------~~ 233 (291)
T cd05094 163 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN---------TE 233 (291)
T ss_pred EECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---------HH
Confidence 9999999986544332222233456789999999998899999999999999999999 8888753211 01
Q ss_pred HHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 660 FVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
... ....+. .. ..+...+..+.+++.+||+.||++|||+.+|+++|+++....
T Consensus 234 ~~~----~~~~~~---~~---------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 234 VIE----CITQGR---VL---------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred HHH----HHhCCC---CC---------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 111 111110 10 111223467889999999999999999999999999986543
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-33 Score=294.29 Aligned_cols=225 Identities=22% Similarity=0.206 Sum_probs=179.6
Q ss_pred cccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCC
Q 041821 468 EELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 542 (736)
+.||+|+||.||+++. .+++.||+|.++... .....+.+|+.+++.++||||+++++++...+..+|||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999995 468999999996532 23355778999999999999999999999999999999999999
Q ss_pred CHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeeccccc
Q 041821 543 SLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGT 606 (736)
Q Consensus 543 sL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt 606 (736)
+|..++.....+++..+..++.||+.||.|||+.+ ..+||+|||+++....... ......||
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt 158 (323)
T cd05595 81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGT 158 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC--ccccccCC
Confidence 99999988778999999999999999999999763 3689999999875432221 13346799
Q ss_pred CcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCC
Q 041821 607 KGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKG 686 (736)
Q Consensus 607 ~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 686 (736)
+.|+|||++.+..++.++|||||||++|||++|+.||..... ....... .. .. .
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~---------~~~~~~~----~~-----------~~--~ 212 (323)
T cd05595 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---------ERLFELI----LM-----------EE--I 212 (323)
T ss_pred cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH---------HHHHHHH----hc-----------CC--C
Confidence 999999999998999999999999999999999999863211 0011100 00 00 0
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 687 KFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 687 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
..+......+.+++.+||+.||++|| ++.+++++
T Consensus 213 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 213 RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 11223345788999999999999998 88888865
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=293.01 Aligned_cols=183 Identities=24% Similarity=0.262 Sum_probs=159.2
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
+....|++.++||+|+||.||+++.. ++..+|+|.+.... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence 45678899999999999999999954 58889999886532 3346688999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEcccCcccccCCCCCcc
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~~~~~~~~~~ 598 (736)
|||+++++|.+++.....+++..+..++.|+++||.|||+. +..+||+|||++.......
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--- 158 (333)
T cd06650 82 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 158 (333)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc---
Confidence 99999999999998877899999999999999999999963 2368999999997653321
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNW 645 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~ 645 (736)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 159 -ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred -cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 2335689999999999988899999999999999999999999864
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=288.40 Aligned_cols=244 Identities=23% Similarity=0.342 Sum_probs=189.7
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 531 (736)
|+...+.+.+.||+|+||.||++... ++..+|+|.+.... ...+.+.+|+.++++++||||+++++++...+.
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 34566788899999999999999842 24568999987543 345678999999999999999999999999999
Q ss_pred EEEEEecCCCCCHhhhcccCC-------------CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEE
Q 041821 532 RLLIYEYVEKQSLDKHLFSSY-------------FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKI 582 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~-------------~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl 582 (736)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+.++ .+||
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEe
Confidence 999999999999999986432 48999999999999999999997643 5799
Q ss_pred cccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHH
Q 041821 583 ADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFV 661 (736)
Q Consensus 583 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 661 (736)
+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||..... ....
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~---------~~~~ 232 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---------NEVI 232 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---------HHHH
Confidence 99999986644332222223445778999999998889999999999999999998 8888753211 0111
Q ss_pred HHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 662 REVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
. .+..+. . .. .+...+..+.+++.+||+.||.+|||+.+|++.|+++...
T Consensus 233 ~----~i~~~~---~-----~~----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 233 E----CITQGR---V-----LQ----RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred H----HHHcCC---c-----CC----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 1 111110 0 00 1112335689999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=286.30 Aligned_cols=240 Identities=24% Similarity=0.336 Sum_probs=184.3
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR 530 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 530 (736)
+...+|++.+.||+|+||.||+|... .+..||||++.... ....++.+|+.+++.++||||+++++++.++.
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 45677889999999999999998742 24679999986432 23456889999999999999999999999999
Q ss_pred eEEEEEecCCCCCHhhhcccCC----------CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcc
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSY----------FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIAD 584 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~----------~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~D 584 (736)
..++||||+++++|.+++.... .+++..+..++.|+++||.|||+.+ ..+||+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~d 162 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD 162 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECC
Confidence 9999999999999999986422 3578889999999999999999753 3689999
Q ss_pred cCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHH
Q 041821 585 FGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVRE 663 (736)
Q Consensus 585 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 663 (736)
||+++...............+++.|||||++.+..++.++|||||||++|||++ |..||..... ......
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~---------~~~~~~ 233 (277)
T cd05062 163 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN---------EQVLRF 233 (277)
T ss_pred CCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH---------HHHHHH
Confidence 999976544322211222345778999999998889999999999999999999 6777753211 011111
Q ss_pred HHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 664 VKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 664 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
..... . ...+...+..+.+++.+||+.||++|||+.|++++|++
T Consensus 234 ----~~~~~---~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 234 ----VMEGG---L---------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred ----HHcCC---c---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 00000 0 01112234578899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=287.62 Aligned_cols=243 Identities=25% Similarity=0.312 Sum_probs=188.4
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCC------CcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD------GRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE 528 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 528 (736)
++....|++.+.||+|+||.||++.... ...+|+|.+.... .....+.+|+.++.++ +|+||+++++++..
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 3455677888999999999999998532 3679999986532 3345688999999999 79999999999999
Q ss_pred CCeEEEEEecCCCCCHhhhccc----------------CCCCCHHHHHHHHHHHHHHhhhhhcCC---------------
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFS----------------SYFLGWKERFKVALGTAKGLAYLHHDE--------------- 577 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~----------------~~~l~~~~~~~i~~~i~~gL~yLH~~~--------------- 577 (736)
++..+++|||+++|+|.+++.. ...+++..++.++.|++.||.|||+.+
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTE 167 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcC
Confidence 9999999999999999999853 236889999999999999999999763
Q ss_pred -CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchh
Q 041821 578 -FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEA 655 (736)
Q Consensus 578 -~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~ 655 (736)
..+||+|||+++.+.............++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------- 240 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV------- 240 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH-------
Confidence 3689999999987654332222222345678999999988889999999999999999997 8888753210
Q ss_pred HHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 656 ELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
..... .... ......+......+.+|+.+||+.||++|||+.|+++.|+++.
T Consensus 241 --~~~~~----~~~~------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 241 --EELFK----LLKE------------GYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred --HHHHH----HHHc------------CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 00111 1000 0011122234567889999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=297.01 Aligned_cols=227 Identities=24% Similarity=0.300 Sum_probs=185.2
Q ss_pred ccCeeceeEEEEeeeC-CCcEEEEEEeCcc-cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCHhh
Q 041821 469 ELGRGGSGAVYKGVLA-DGRAVAVKRLGDL-HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDK 546 (736)
Q Consensus 469 ~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 546 (736)
+||+|.||+||-|+.. +...+|||.+... .+..+-+..|+.+.++|+|.|||+++|.+.++++.-|.||-++||+|..
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 6999999999999954 4668999999653 3445667889999999999999999999999999999999999999999
Q ss_pred hcccCC-CC--CHHHHHHHHHHHHHHhhhhhcCCC-----------------ccEEcccCcccccCCCCCcceeeccccc
Q 041821 547 HLFSSY-FL--GWKERFKVALGTAKGLAYLHHDEF-----------------EPKIADFGLAKLSQRGSNSSQFSQIRGT 606 (736)
Q Consensus 547 ~l~~~~-~l--~~~~~~~i~~~i~~gL~yLH~~~~-----------------~~kl~DFGla~~~~~~~~~~~~~~~~gt 606 (736)
+|+..- ++ .+..+-.+..||++||.|||++++ .+||+|||.++.+..-.. .+.+..||
T Consensus 662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP--~TETFTGT 739 (1226)
T KOG4279|consen 662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP--CTETFTGT 739 (1226)
T ss_pred HHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCc--cccccccc
Confidence 998653 66 788888899999999999997633 679999999986644322 25567899
Q ss_pred CcccChhcccCCC--CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCcc
Q 041821 607 KGYMAPEWASNLP--ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRL 684 (736)
Q Consensus 607 ~~y~aPE~~~~~~--~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 684 (736)
..|||||++..++ |+.++|||||||++.||.||++||...-.... + +-++---..
T Consensus 740 LQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA------------A-----------MFkVGmyKv 796 (1226)
T KOG4279|consen 740 LQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA------------A-----------MFKVGMYKV 796 (1226)
T ss_pred hhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH------------h-----------hhhhcceec
Confidence 9999999998765 89999999999999999999999974322111 0 000000112
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 685 KGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 685 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+++|.+..+....+|++|+.+||.+||++.++++.
T Consensus 797 HP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 797 HPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred CCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 345688888999999999999999999999999863
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=263.62 Aligned_cols=229 Identities=22% Similarity=0.274 Sum_probs=189.8
Q ss_pred hhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
+++++.+.||+|-||.||.|+ .+++..||+|++.+++ +-..++.+|+++-+.|+||||+++|++|.+....||++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 456788999999999999999 4557899999997643 34567899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccc--CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc
Q 041821 537 EYVEKQSLDKHLFS--SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 537 e~~~~gsL~~~l~~--~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
||.++|+|...|.. ...+++.....++.|+|.||.|+|..+ ..+||+|||-+..... .
T Consensus 102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~----~ 177 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----N 177 (281)
T ss_pred EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCC----C
Confidence 99999999999984 447999999999999999999999653 2679999999875432 2
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....+||..|.|||+..+..++.++|+|++|++.||++.|.+||...... .....+. . .+
T Consensus 178 kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~---------etYkrI~----k------~~ 238 (281)
T KOG0580|consen 178 KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS---------ETYKRIR----K------VD 238 (281)
T ss_pred CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH---------HHHHHHH----H------cc
Confidence 356688999999999999999999999999999999999999999743311 1111111 1 01
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
-.++........++|.+|+..+|.+|.+..|++.+
T Consensus 239 -------~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 239 -------LKFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred -------ccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 12234455678899999999999999999999886
|
|
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=288.74 Aligned_cols=242 Identities=29% Similarity=0.370 Sum_probs=187.4
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeC
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEG 529 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 529 (736)
+...++.+.+.||+|+||.||++... .+..||||.++... ...+.+.+|+.+++++ +||||+++++++...
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 44567888999999999999999731 24579999987543 2345688999999999 799999999999999
Q ss_pred CeEEEEEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCccccc
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLS 591 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~ 591 (736)
+..++||||+++|+|.+++.... .+++.++..++.|++.||.|||+.++ .+||+|||+++..
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~ 191 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDI 191 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccc
Confidence 99999999999999999997543 48999999999999999999997643 5799999999866
Q ss_pred CCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhh
Q 041821 592 QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILY 670 (736)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (736)
.............++..|+|||.+.+..++.++|||||||++|||++ |..||...... . .+.. ...
T Consensus 192 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~-----~---~~~~----~~~- 258 (302)
T cd05055 192 MNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD-----S---KFYK----LIK- 258 (302)
T ss_pred cCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch-----H---HHHH----HHH-
Confidence 54332211223346788999999998889999999999999999998 88887633211 0 0101 000
Q ss_pred hccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 671 EEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 671 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.......+...+..+.+++.+||+.+|++|||+.+|++.|++.
T Consensus 259 -----------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 259 -----------EGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -----------cCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0001111122345788999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=282.04 Aligned_cols=239 Identities=25% Similarity=0.355 Sum_probs=188.2
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+...+|++.++||+|+||.||+|+..+...||+|+++......+.+.+|++++++++||||+++++.+.+ ...++||||
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~ 81 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 81 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEc
Confidence 3456789999999999999999997776789999998655556788999999999999999999998754 567999999
Q ss_pred CCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCccee
Q 041821 539 VEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 539 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~ 600 (736)
+++++|.+++... ..+++..+..++.|+++||+|||+.++ .+||+|||+++......... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~-~ 160 (262)
T cd05071 82 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-R 160 (262)
T ss_pred CCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccccc-c
Confidence 9999999999753 358999999999999999999997633 58999999998665432211 2
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....++..|+|||+..+..++.++||||||+++|||++ |..||..... . .........
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~------~-------~~~~~~~~~-------- 219 (262)
T cd05071 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------R-------EVLDQVERG-------- 219 (262)
T ss_pred cCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh------H-------HHHHHHhcC--------
Confidence 23446778999999988889999999999999999999 7777753210 0 000111000
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.....+...+..+.+++.+|++.||++||++.++++.|+..
T Consensus 220 ----~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 220 ----YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ----CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 00112234456788999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=286.34 Aligned_cols=238 Identities=25% Similarity=0.316 Sum_probs=184.1
Q ss_pred HhhhhcccccCeeceeEEEEeeeCC------CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLAD------GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
...+.+.+.||+|+||.||+|.... +..||+|.+.... .....+.+|+.++++++|+||+++++++.+....
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4567788999999999999999643 5689999886432 3345689999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCC-------CCCHHHHHHHHHHHHHHhhhhhcCC-------------------CccEEcccC
Q 041821 533 LLIYEYVEKQSLDKHLFSSY-------FLGWKERFKVALGTAKGLAYLHHDE-------------------FEPKIADFG 586 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~-------~l~~~~~~~i~~~i~~gL~yLH~~~-------------------~~~kl~DFG 586 (736)
++||||+++++|.+++.... .+++..+..++.||++||+|||+.+ ..+||+|||
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg 164 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFG 164 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCc
Confidence 99999999999999986543 5899999999999999999999763 247999999
Q ss_pred cccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHH
Q 041821 587 LAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVK 665 (736)
Q Consensus 587 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (736)
+++.+..............+..|+|||++.+..++.++|||||||++|||++ |..||..... . .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~------~---~~~~~-- 233 (277)
T cd05036 165 MARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN------Q---EVMEF-- 233 (277)
T ss_pred cccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH------H---HHHHH--
Confidence 9987643222111122234568999999998889999999999999999997 8888863211 0 11110
Q ss_pred HHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 666 RKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 666 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
+.. ......+...+..+.+++.+||+.+|++||++.+|+++|+.
T Consensus 234 --~~~------------~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 234 --VTG------------GGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred --HHc------------CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 000 00111222334678899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=274.97 Aligned_cols=250 Identities=23% Similarity=0.278 Sum_probs=186.1
Q ss_pred hhcccccCeeceeEEEEee-eCCCcEEEEEEeCc---ccccHHHHHHHHHHHhcCCCCceeeEEEEEEe-----CCeEEE
Q 041821 464 KSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGD---LHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE-----GRHRLL 534 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~~~l 534 (736)
|...+.||+|+||.|..+. ..+|+.||||++.. .....++..+|+++|+.++|+||+.+++.+.. -+..|+
T Consensus 24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYi 103 (359)
T KOG0660|consen 24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYL 103 (359)
T ss_pred ecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEE
Confidence 3346789999999999999 45689999999963 22345677899999999999999999999866 346799
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
|+|+| ..+|.+.++.+..|+...+..++.||++||.|+|+.+ ..+||+|||+|+.........
T Consensus 104 V~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~ 182 (359)
T KOG0660|consen 104 VFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDG 182 (359)
T ss_pred ehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCccc
Confidence 99999 5899999998888999999999999999999999753 367999999999886543333
Q ss_pred eeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHH-------HHHHHHhh
Q 041821 599 QFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR-------EVKRKILY 670 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 670 (736)
.++..+-|.+|+|||++.. ..|+.+.||||.|||+.||++|++.|.+...- ..+..+.. .....+..
T Consensus 183 ~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v-----~Ql~lI~~~lGtP~~e~l~~i~s 257 (359)
T KOG0660|consen 183 FMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYV-----HQLQLILELLGTPSEEDLQKIRS 257 (359)
T ss_pred chhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchH-----HHHHHHHHhcCCCCHHHHHHhcc
Confidence 4678889999999998764 56999999999999999999999999754321 11111110 00111110
Q ss_pred hc-cccccccccCccCCCC---CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 671 EE-EAWIEEIVDPRLKGKF---NTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 671 ~~-~~~~~~~~d~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.. ..++..+ ....+..+ -+......++|+.+||..||.+|+|++|+++|
T Consensus 258 ~~ar~yi~sl-p~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 258 EKARPYIKSL-PQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHHHHhC-CCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00 0001111 01111110 11334578899999999999999999999876
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-32 Score=284.84 Aligned_cols=251 Identities=20% Similarity=0.250 Sum_probs=182.5
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+.|.+.++||+|+||.||+|+.. +++.||+|.++... .....+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 45788899999999999999954 58899999986432 2345678999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
++ ++|.+++.... .+++..+..++.||+.||+|||+.+ ..+||+|||+++....... ...
T Consensus 85 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~--~~~ 161 (288)
T cd07871 85 LD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK--TYS 161 (288)
T ss_pred CC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc--ccc
Confidence 98 59998886544 5789999999999999999999764 3689999999976543222 133
Q ss_pred cccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHH----HHhhh-cccc
Q 041821 602 QIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR----KILYE-EEAW 675 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~ 675 (736)
...|++.|+|||++.+ ..++.++||||+||++|||++|+.||..... ............. .+... ....
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 162 NEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTV-----KEELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred CceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCChHHhhccccchh
Confidence 4568999999999875 5689999999999999999999999864321 1111111110000 00000 0000
Q ss_pred ccccccCccCCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 676 IEEIVDPRLKGK----FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 676 ~~~~~d~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......+..... ........+.+|+.+||+.||.+|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 111111111100 011123567899999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=279.95 Aligned_cols=230 Identities=25% Similarity=0.358 Sum_probs=178.3
Q ss_pred cccCeeceeEEEEeee-CCCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 468 EELGRGGSGAVYKGVL-ADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
+.||+|+||.||+|+. .+++.+|+|.+... ......+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 4799999999999995 46889999988643 23446789999999999999999999999999999999999999999
Q ss_pred hhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceeecccccC
Q 041821 545 DKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTK 607 (736)
Q Consensus 545 ~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~ 607 (736)
.+++.... .+++..+..++.|++.||.|||+.++ .+||+|||++................++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 160 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPV 160 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCce
Confidence 99987544 68999999999999999999997643 58999999997654322111111112345
Q ss_pred cccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCC
Q 041821 608 GYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKG 686 (736)
Q Consensus 608 ~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 686 (736)
.|+|||.+.+..++.++||||||+++|||++ |..|+..... . ...... . .....
T Consensus 161 ~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~------~-------~~~~~~--------~----~~~~~ 215 (252)
T cd05084 161 KWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN------Q-------QTREAI--------E----QGVRL 215 (252)
T ss_pred eecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH------H-------HHHHHH--------H----cCCCC
Confidence 7999999998889999999999999999998 7777753210 0 000000 0 00111
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 687 KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 687 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
..+...+..+.+++.+||+.+|++|||+.+|+++|+
T Consensus 216 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 216 PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 122233567889999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=291.68 Aligned_cols=225 Identities=23% Similarity=0.221 Sum_probs=179.1
Q ss_pred cccCeeceeEEEEeee----CCCcEEEEEEeCccc-----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 468 EELGRGGSGAVYKGVL----ADGRAVAVKRLGDLH-----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+.||+|+||.||+++. ..++.||||.++... .....+.+|+.+|+.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999984 347899999986532 2234577899999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+++++|.+++.....+.+..+..++.||+.||.|||+.+ ..+||+|||+++....... ....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~ 159 (323)
T cd05584 82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT--VTHT 159 (323)
T ss_pred CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC--cccc
Confidence 999999999988888899999999999999999999763 3689999999875433222 1334
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
..||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..... .+.. .
T Consensus 160 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~---------~~~~~----~~~~-----------~ 215 (323)
T cd05584 160 FCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR---------KKTID----KILK-----------G 215 (323)
T ss_pred cCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH---------HHHHH----HHHc-----------C
Confidence 5799999999999988899999999999999999999999863211 01111 1111 1
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
. ...+......+.+++.+||+.||++|| ++.+++++
T Consensus 216 ~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 216 K--LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred C--CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 0 011222345788999999999999999 78888775
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.6e-33 Score=294.12 Aligned_cols=236 Identities=25% Similarity=0.313 Sum_probs=191.4
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCC--C--cEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLAD--G--RAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~--~--~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
|..+...+.++||+|.||.|++|.+.. | ..||||.++... .....|++|+.+|.+|+|+|+|+|||+..+ ...
T Consensus 107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred ccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chh
Confidence 445566778899999999999999754 3 369999997644 356789999999999999999999999988 788
Q ss_pred EEEEecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRG 594 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~ 594 (736)
.+|+|+++.|+|.+.|++. ..|-......++.|||.||.||..+++ .+||+||||.+.+...
T Consensus 186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 9999999999999999873 267788899999999999999976532 6899999999988776
Q ss_pred CCcceee-cccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhc
Q 041821 595 SNSSQFS-QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 595 ~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (736)
+....+. ...-...|.|||.+....|+.++|||+|||++|||++ |..||...... .
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~-------------q--------- 323 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI-------------Q--------- 323 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH-------------H---------
Confidence 5543222 2233568999999999999999999999999999999 56677543210 0
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+.+.+|..-+-.-+..+++++.+++..||..+|++|||+..|.+.
T Consensus 324 ---IL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 324 ---ILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred ---HHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 333444444445567789999999999999999999999999743
|
|
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.3e-32 Score=286.64 Aligned_cols=247 Identities=21% Similarity=0.286 Sum_probs=184.0
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCC---------------CcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceee
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLAD---------------GRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVR 521 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~---------------~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~ 521 (736)
++..+|++.+.||+|+||.||+++... ...||+|.++.. ......+.+|++++++++|+||++
T Consensus 2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 2 FPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred CchHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCe
Confidence 455678899999999999999987532 235899998653 233456899999999999999999
Q ss_pred EEEEEEeCCeEEEEEecCCCCCHhhhcccCC------------CCCHHHHHHHHHHHHHHhhhhhcCC------------
Q 041821 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY------------FLGWKERFKVALGTAKGLAYLHHDE------------ 577 (736)
Q Consensus 522 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------~l~~~~~~~i~~~i~~gL~yLH~~~------------ 577 (736)
+++++...+..++||||+++++|.+++.... .+++..++.++.|+++||+|||+.+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 9999999999999999999999999885431 3688999999999999999999763
Q ss_pred ----CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh--CCCCCCccccCCc
Q 041821 578 ----FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK--GIRLSNWVVEDGE 651 (736)
Q Consensus 578 ----~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t--g~~p~~~~~~~~~ 651 (736)
..+||+|||+++...............++..|+|||++....++.++|||||||++|||++ +..||.....
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~--- 238 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD--- 238 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh---
Confidence 3689999999986544322222223445778999999988889999999999999999998 4455542211
Q ss_pred cchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 652 GQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
............... .......+...+..+.+++.+||+.||++|||+++|++.|+.
T Consensus 239 ------~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 239 ------EQVIENTGEFFRNQG---------RQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred ------HHHHHHHHHhhhhcc---------ccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 111111111100000 000001111234689999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.4e-33 Score=298.19 Aligned_cols=235 Identities=20% Similarity=0.199 Sum_probs=186.1
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
+|.+.+.||+|+||.||+|+.. +++.||||+++... .....+.+|+.++..++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 5778899999999999999954 68999999996532 334568899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC------
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS------ 595 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~------ 595 (736)
|+++++|.+++.....+++..+..++.||+.||+|||+.+ ..+||+|||+++......
T Consensus 82 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 161 (350)
T cd05573 82 YMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYL 161 (350)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccc
Confidence 9999999999988778999999999999999999999753 368999999998665433
Q ss_pred ---------------------CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccch
Q 041821 596 ---------------------NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQE 654 (736)
Q Consensus 596 ---------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~ 654 (736)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~------ 235 (350)
T cd05573 162 NDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL------ 235 (350)
T ss_pred cccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH------
Confidence 00112345799999999999999999999999999999999999999974321
Q ss_pred hHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHH
Q 041821 655 AELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT-MDSVVQS 720 (736)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~ 720 (736)
.... ..+... .....-+ .....+..+.+++.+|++ ||.+||+ +.+++++
T Consensus 236 ---~~~~----~~i~~~----~~~~~~p-----~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 236 ---QETY----NKIINW----KESLRFP-----PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred ---HHHH----HHHhcc----CCcccCC-----CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 0000 111000 0000001 011135678889999997 9999999 9999986
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3e-32 Score=297.37 Aligned_cols=236 Identities=19% Similarity=0.167 Sum_probs=179.5
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.|.+.+.||+|+||+||+|+. .+++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 467788999999999999984 458899999996532 234568899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCc----
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNS---- 597 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~---- 597 (736)
|+++|+|.+++.....+++..+..++.||+.||.|||+.++ .+||+|||+++.+......
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~ 161 (381)
T cd05626 82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ 161 (381)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence 99999999999887789999999999999999999997643 6899999998643211000
Q ss_pred -----------------------------------------ceeecccccCcccChhcccCCCCccccceechhHHHHHH
Q 041821 598 -----------------------------------------SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636 (736)
Q Consensus 598 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el 636 (736)
......+||+.|||||++.+..++.++|||||||++|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el 241 (381)
T cd05626 162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM 241 (381)
T ss_pred ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence 001235799999999999988899999999999999999
Q ss_pred HhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHH--cccCCCCCCCCH
Q 041821 637 VKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGIS--CVDEDRSKRPTM 714 (736)
Q Consensus 637 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPs~ 714 (736)
++|+.||...... .... .+.. ... .+...........+.+++.+ |+..+|..||++
T Consensus 242 ltG~~Pf~~~~~~-----~~~~--------~i~~-----~~~----~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~ 299 (381)
T cd05626 242 LVGQPPFLAPTPT-----ETQL--------KVIN-----WEN----TLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGA 299 (381)
T ss_pred HhCCCCCcCCCHH-----HHHH--------HHHc-----ccc----ccCCCCCCCCCHHHHHHHHHHccCcccccCCCCH
Confidence 9999999743210 0000 0000 000 00000111223466677766 566777779999
Q ss_pred HHHHHH
Q 041821 715 DSVVQS 720 (736)
Q Consensus 715 ~evl~~ 720 (736)
.+|++|
T Consensus 300 ~~~l~h 305 (381)
T cd05626 300 DDIKAH 305 (381)
T ss_pred HHHhcC
Confidence 999987
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-32 Score=285.99 Aligned_cols=239 Identities=24% Similarity=0.324 Sum_probs=185.5
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCcccc--cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLHQ--GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 531 (736)
...++.+.++||+|+||.||+|+.. .++.||||+++.... ..+.+.+|+.++..++||||+++++++.....
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP 82 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc
Confidence 3456788899999999999999853 247899999975432 23568899999999999999999999999999
Q ss_pred EEEEEecCCCCCHhhhcccC----------------CCCCHHHHHHHHHHHHHHhhhhhcCC----------------Cc
Q 041821 532 RLLIYEYVEKQSLDKHLFSS----------------YFLGWKERFKVALGTAKGLAYLHHDE----------------FE 579 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~ 579 (736)
.++++||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ..
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCc
Confidence 99999999999999998421 24788899999999999999999763 36
Q ss_pred cEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHH
Q 041821 580 PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELK 658 (736)
Q Consensus 580 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~ 658 (736)
+||+|||+++...............+++.|+|||.+....++.++|||||||++|||++ |..||..... .
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---------~ 233 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN---------Q 233 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH---------H
Confidence 89999999986644332222233456789999999988889999999999999999998 7777753210 1
Q ss_pred HHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 659 RFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
... ..+... .. ...+...+..+.+++.+||+.+|++||++.+|++.|+.
T Consensus 234 ~~~----~~i~~~-----------~~-~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 234 DVI----EMIRNR-----------QV-LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHH----HHHHcC-----------Cc-CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111 111111 10 11222345668899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.5e-32 Score=285.15 Aligned_cols=243 Identities=21% Similarity=0.282 Sum_probs=189.3
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCC-----CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEe-CC
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLAD-----GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE-GR 530 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 530 (736)
+...+|.+.+.||+|+||.||+|.... +..||+|++.... ...+.+.+|+.++++++||||+++++++.. +.
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 456778889999999999999999655 6889999986532 334668899999999999999999998876 56
Q ss_pred eEEEEEecCCCCCHhhhcccC--------CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccC
Q 041821 531 HRLLIYEYVEKQSLDKHLFSS--------YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFG 586 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~--------~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFG 586 (736)
..++++||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ..+||+|||
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g 162 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNA 162 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCC
Confidence 789999999999999998653 35889999999999999999999763 368999999
Q ss_pred cccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHH
Q 041821 587 LAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVK 665 (736)
Q Consensus 587 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (736)
+++.+.............++..|+|||++.+..++.++||||||+++||+++ |+.||..... . .+....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~------~---~~~~~~- 232 (280)
T cd05043 163 LSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP------F---EMAAYL- 232 (280)
T ss_pred CcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH------H---HHHHHH-
Confidence 9986644332211223346778999999998889999999999999999999 9998863211 0 111111
Q ss_pred HHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 666 RKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 666 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
..+ .. ...+...+..+.+++.+||+.||++|||+.+|++.|+.+.+
T Consensus 233 ---~~~--------~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 233 ---KDG--------YR----LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred ---HcC--------CC----CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 000 00 01112234578899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.3e-32 Score=284.15 Aligned_cols=242 Identities=24% Similarity=0.290 Sum_probs=183.8
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCc----EEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGR----AVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
...+++.+.||+|+||.||+|... +++ .+++|.+.... ....++..|+.++++++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~ 84 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQ 84 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccE
Confidence 345677889999999999999953 344 47888875432 233567888999999999999999998754 5578
Q ss_pred EEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC
Q 041821 534 LIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~ 596 (736)
+++||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ ..+||+|||+++.......
T Consensus 85 ~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK 164 (279)
T ss_pred EEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCc
Confidence 899999999999999764 47899999999999999999999753 3689999999987654333
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ... .. .+..+.
T Consensus 165 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~------~~~---~~----~~~~~~--- 228 (279)
T cd05111 165 KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP------HEV---PD----LLEKGE--- 228 (279)
T ss_pred ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH------HHH---HH----HHHCCC---
Confidence 222334557789999999998899999999999999999998 9888863211 001 01 011110
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
.... +......+.+++.+||+.||++|||+.|+++.|..+..+.
T Consensus 229 --~~~~-------~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 229 --RLAQ-------PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred --cCCC-------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 0011 1112346788999999999999999999999998876543
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.7e-32 Score=289.18 Aligned_cols=234 Identities=19% Similarity=0.207 Sum_probs=179.5
Q ss_pred cccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|+||.||+++. .+++.||||+++... ...+.+..|..++.++ +||||+++++++.+.+..+|||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999995 458899999997532 2234578899999988 699999999999999999999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
|+|..++.....+++..+..++.|++.||.|||+.+ ..+||+|||+++....... ......|
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~g 158 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD--TTSTFCG 158 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCC--ccccccC
Confidence 999999887778999999999999999999999763 3689999999975322211 2344679
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
|+.|+|||++.+..++.++|||||||++|||++|+.||............ .. ......+.. ...
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~-~~---~~~~~~~~~-----------~~~- 222 (329)
T cd05588 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQN-TE---DYLFQVILE-----------KQI- 222 (329)
T ss_pred CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccccccc-ch---HHHHHHHHc-----------CCC-
Confidence 99999999999999999999999999999999999999643221110000 00 111111111 000
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCC------HHHHHHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRPT------MDSVVQS 720 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~evl~~ 720 (736)
..+......+.+++.+||+.||.+||+ +.++++|
T Consensus 223 -~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 223 -RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred -CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 112223456889999999999999997 6777765
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.2e-32 Score=279.63 Aligned_cols=239 Identities=23% Similarity=0.248 Sum_probs=185.7
Q ss_pred HHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
...+|++.++||+|+||.||+|+. .+++.||+|++.... .....+.+|+.++++++||||+++++++...+..++|||
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e 86 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME 86 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence 345788899999999999999995 568899999986433 334567899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|+++++|.+++.....+++..+..++.|++.||.|||+.++ .+||+|||+++....... ...
T Consensus 87 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~--~~~ 164 (267)
T cd06646 87 YCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA--KRK 164 (267)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccccc--ccC
Confidence 99999999999877789999999999999999999997643 689999999986643221 123
Q ss_pred cccccCcccChhccc---CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 602 QIRGTKGYMAPEWAS---NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
...|++.|+|||.+. ...++.++|||||||++|||++|+.|+........ .. ... ...
T Consensus 165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~--------~~-----~~~------~~~ 225 (267)
T cd06646 165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA--------LF-----LMS------KSN 225 (267)
T ss_pred ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh--------he-----eee------cCC
Confidence 356889999999884 34578899999999999999999999853211100 00 000 000
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
...+... .....+..+.+++.+||+.+|++|||+++|+++|
T Consensus 226 ~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 226 FQPPKLK--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCCCCc--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0011111 1122346788999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.2e-32 Score=279.77 Aligned_cols=230 Identities=24% Similarity=0.323 Sum_probs=179.6
Q ss_pred ccCeeceeEEEEeee---CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCC
Q 041821 469 ELGRGGSGAVYKGVL---ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542 (736)
Q Consensus 469 ~lG~G~fg~Vy~~~~---~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 542 (736)
+||+|+||.||+|.+ .++..+|+|+++... ...+++.+|+.+++.++||||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 699999999999974 347889999986433 23467889999999999999999999885 45678999999999
Q ss_pred CHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcc-eeecccc
Q 041821 543 SLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSS-QFSQIRG 605 (736)
Q Consensus 543 sL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~-~~~~~~g 605 (736)
+|.+++.....+++..+..++.|++.||+|||+.++ .+||+|||+++......... ......+
T Consensus 81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~ 160 (257)
T cd05116 81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKW 160 (257)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCC
Confidence 999999877789999999999999999999997643 57999999998765433221 1122334
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCcc
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRL 684 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 684 (736)
++.|+|||.+....++.++|||||||++|||++ |..||..... ...... +..+ .
T Consensus 161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---------~~~~~~----i~~~------------~ 215 (257)
T cd05116 161 PVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG---------NEVTQM----IESG------------E 215 (257)
T ss_pred CccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---------HHHHHH----HHCC------------C
Confidence 679999999988889999999999999999998 8888863211 011111 1111 1
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 685 KGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 685 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
....+...+..+.+++.+||+.||++||++.+|.++|++.
T Consensus 216 ~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 216 RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 1112223456788999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.4e-32 Score=283.57 Aligned_cols=246 Identities=22% Similarity=0.284 Sum_probs=186.8
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCC-----------------CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCcee
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLAD-----------------GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLV 520 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv 520 (736)
....|++.+.||+|+||.||+++... +..||+|.+.... ...+.+.+|++++++++||||+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEe
Confidence 34578889999999999999988532 2468999987543 3456788999999999999999
Q ss_pred eEEEEEEeCCeEEEEEecCCCCCHhhhcccCC-----------CCCHHHHHHHHHHHHHHhhhhhcCC------------
Q 041821 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-----------FLGWKERFKVALGTAKGLAYLHHDE------------ 577 (736)
Q Consensus 521 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------~l~~~~~~~i~~~i~~gL~yLH~~~------------ 577 (736)
++++++..++..+++|||+++++|.+++.... .+++..+..++.|++.||.|||+.+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil 162 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL 162 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence 99999999999999999999999999987654 6899999999999999999999764
Q ss_pred ----CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh--CCCCCCccccCCc
Q 041821 578 ----FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK--GIRLSNWVVEDGE 651 (736)
Q Consensus 578 ----~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t--g~~p~~~~~~~~~ 651 (736)
..+||+|||+++...............+++.|||||.+.+..++.++|||||||++|||++ +..|+....
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~---- 238 (296)
T cd05051 163 VGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT---- 238 (296)
T ss_pred ecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC----
Confidence 3689999999986544332222334456789999999988889999999999999999998 556654221
Q ss_pred cchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 652 GQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
............... ........+...+..+.+++.+||+.||++|||+.||++.|+.
T Consensus 239 -----~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 239 -----DQQVIENAGHFFRDD---------GRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred -----hHHHHHHHHhccccc---------cccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 011111111100000 0000011122334678999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-32 Score=288.58 Aligned_cols=245 Identities=25% Similarity=0.280 Sum_probs=188.5
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC--------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA--------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFC 526 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 526 (736)
++....|.+.+.||+|+||.||+++.. ....+|+|.++... .....+.+|+.+++++ +||||+++++++
T Consensus 14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (307)
T cd05098 14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 93 (307)
T ss_pred eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 455678899999999999999999742 23579999997532 3345688899999999 799999999999
Q ss_pred EeCCeEEEEEecCCCCCHhhhcccCC----------------CCCHHHHHHHHHHHHHHhhhhhcCC-------------
Q 041821 527 SEGRHRLLIYEYVEKQSLDKHLFSSY----------------FLGWKERFKVALGTAKGLAYLHHDE------------- 577 (736)
Q Consensus 527 ~~~~~~~lv~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~i~~gL~yLH~~~------------- 577 (736)
...+..++||||+++|+|.+++.... .+++.+++.++.|++.||+|||+.+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill 173 (307)
T cd05098 94 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 173 (307)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEE
Confidence 99999999999999999999997532 4889999999999999999999763
Q ss_pred ---CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccc
Q 041821 578 ---FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQ 653 (736)
Q Consensus 578 ---~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~ 653 (736)
..+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~------ 247 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------ 247 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC------
Confidence 3689999999976643222111222234578999999998889999999999999999998 777775221
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 654 EAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
. ..+.. .... ......+......+.+++.+||+.+|++|||+.+|++.|+++...
T Consensus 248 ~---~~~~~----~~~~------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 248 V---EELFK----LLKE------------GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred H---HHHHH----HHHc------------CCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 0 11111 1100 001112223456788899999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.4e-32 Score=288.24 Aligned_cols=234 Identities=20% Similarity=0.211 Sum_probs=178.7
Q ss_pred cccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|+||.||+++.. +++.||+|.+++.. ...+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999954 57899999996532 2334577898888776 799999999999999999999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
|+|..++.....+++..+..++.||+.||.|||+.+ ..+||+|||+++....... ......|
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~--~~~~~~g 158 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCG 158 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC--ccccccC
Confidence 999999887778999999999999999999999763 3789999999975432221 1334679
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
|+.|+|||++.+..++.++|||||||++|||++|+.||.............. ......+... .
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~----~~~~~~i~~~-----------~-- 221 (329)
T cd05618 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE----DYLFQVILEK-----------Q-- 221 (329)
T ss_pred CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccH----HHHHHHHhcC-----------C--
Confidence 9999999999999999999999999999999999999964221111000000 1111111110 0
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCC------HHHHHHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRPT------MDSVVQS 720 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~evl~~ 720 (736)
...+......+.+++.+||+.||++||+ +.++++|
T Consensus 222 ~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 222 IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred CCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 1122233457889999999999999998 4677655
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-32 Score=296.87 Aligned_cols=235 Identities=19% Similarity=0.155 Sum_probs=181.7
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.|.+.+.||+|+||.||+++. .+++.||||++.... .....+.+|+.+|..++||||+++++++.+++..+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 467889999999999999995 458999999996532 233557889999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc---
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS--- 598 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~--- 598 (736)
|+++|+|.+++.....+++..+..++.||+.||+|||+.+ ..+||+|||+++.+.......
T Consensus 82 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 161 (364)
T cd05599 82 YLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYR 161 (364)
T ss_pred CCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccccc
Confidence 9999999999988778999999999999999999999763 368999999997653221100
Q ss_pred ---------------------------------eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCc
Q 041821 599 ---------------------------------QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNW 645 (736)
Q Consensus 599 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~ 645 (736)
.....+||+.|||||++.+..++.++|||||||++|||++|..||..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~ 241 (364)
T cd05599 162 ILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCS 241 (364)
T ss_pred cccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCC
Confidence 01124699999999999999999999999999999999999999963
Q ss_pred cccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC---HHHHHHH
Q 041821 646 VVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT---MDSVVQS 720 (736)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~ 720 (736)
... . .... .+... ......+ ........+.+++.+|+. +|.+|++ +.+++++
T Consensus 242 ~~~-----~----~~~~----~i~~~----~~~~~~~-----~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 242 DNP-----Q----ETYR----KIINW----KETLQFP-----DEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCH-----H----HHHH----HHHcC----CCccCCC-----CCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 321 0 0001 11000 0000000 011224567788889996 9999998 9998875
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.4e-32 Score=278.94 Aligned_cols=238 Identities=25% Similarity=0.338 Sum_probs=187.3
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+...++.+.++||+|+||.||++....+..+|+|.+.......+.+.+|++++++++|||++++++++. .+..+++|||
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF 81 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence 445678889999999999999999877778999998765555677899999999999999999999875 4567899999
Q ss_pred CCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 539 VEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 539 ~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
+++++|.+++.... .+++..+..++.|++.||.|||+.+ ..+||+|||+++........ ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~-~~ 160 (260)
T cd05069 82 MGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT-AR 160 (260)
T ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc-cc
Confidence 99999999997543 5899999999999999999999753 36899999999876443221 12
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....++..|+|||...+..++.++||||||+++|||++ |..||..... ....... ...
T Consensus 161 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---------~~~~~~~----~~~-------- 219 (260)
T cd05069 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN---------REVLEQV----ERG-------- 219 (260)
T ss_pred CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH---------HHHHHHH----HcC--------
Confidence 22346778999999988889999999999999999999 8888763211 0011111 000
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
.....+...+..+.+++.+||+.||++||++.+|++.|++
T Consensus 220 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 220 ----YRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ----CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0011222345678999999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.5e-32 Score=278.68 Aligned_cols=240 Identities=18% Similarity=0.255 Sum_probs=187.8
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
.+|.+.+.||+|+||.||+|+. .+++.||||.++.. ......+.+|+.+++.++||||+++++++.+.+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 3577889999999999999994 46899999987542 233456889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCC
Q 041821 537 EYVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 537 e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~ 596 (736)
||+++++|.+++.. ...++...+..++.|+++||.|||++++ .++|+|||++........
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~ 161 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence 99999999988753 2358899999999999999999997643 689999999987644322
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ...+... +
T Consensus 162 --~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~-------~~~~~~~------------~ 220 (267)
T cd08228 162 --AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-------LFSLCQK------------I 220 (267)
T ss_pred --HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc-------HHHHHHH------------H
Confidence 123356889999999998888999999999999999999999998532111 0111111 1
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
.....+ ..........+.+++.+||+.+|++||++.+|++.|+++.
T Consensus 221 ~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 221 EQCDYP---PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred hcCCCC---CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 110111 1112234567899999999999999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.8e-32 Score=278.71 Aligned_cols=239 Identities=23% Similarity=0.328 Sum_probs=189.0
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
++..+++.+.++||+|+||.||++....+..+|+|.+.......+.+.+|+.++++++|+||+++++++.+ ...+++||
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e 80 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE 80 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence 45667889999999999999999997777889999987655556778999999999999999999999887 77899999
Q ss_pred cCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 538 YVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|+++++|.+++... ..+++..+..++.|++.||.|||+.+ ..+||+|||++......... .
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-~ 159 (260)
T cd05073 81 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT-A 159 (260)
T ss_pred eCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc-c
Confidence 99999999999763 36789999999999999999999763 36899999999766433221 1
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....++..|+|||++....++.++|||||||++|||++ |+.||..... ...... +..+
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---------~~~~~~----~~~~------- 219 (260)
T cd05073 160 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN---------PEVIRA----LERG------- 219 (260)
T ss_pred ccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH---------HHHHHH----HhCC-------
Confidence 223345678999999998889999999999999999999 8888863210 011111 1110
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
.....+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 220 -----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 220 -----YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -----CCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0001112334578899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8e-32 Score=287.23 Aligned_cols=236 Identities=25% Similarity=0.290 Sum_probs=196.1
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCcccc----cHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQ----GEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 533 (736)
....|++.++||+|.||.||+++.+. |+.+|+|.+.+... ..+.+.+|+++|+++. |||||++++.+++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 44568888999999999999999554 99999999976432 3467899999999998 999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC--------------------CccEEcccCcccccCC
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE--------------------FEPKIADFGLAKLSQR 593 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~--------------------~~~kl~DFGla~~~~~ 593 (736)
+|||++.+|.|.+.+... .+++..+..++.||+.++.|||+.+ ..+|++|||++.....
T Consensus 113 lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred EEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 999999999999998776 4999999999999999999999652 3689999999998876
Q ss_pred CCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
+ ......+||+.|+|||++...+|+.++||||+||++|.|++|.+||........ +. .+..+.
T Consensus 192 ~---~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~--------~~-----~i~~~~- 254 (382)
T KOG0032|consen 192 G---ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI--------FL-----AILRGD- 254 (382)
T ss_pred C---ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH--------HH-----HHHcCC-
Confidence 2 236788999999999999999999999999999999999999999985532211 00 111111
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
.......-......+.+++..|+..||.+|+|+.++++|-
T Consensus 255 --------~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~Hp 294 (382)
T KOG0032|consen 255 --------FDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHP 294 (382)
T ss_pred --------CCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCc
Confidence 1122223334567889999999999999999999999983
|
|
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.6e-32 Score=293.60 Aligned_cols=245 Identities=25% Similarity=0.343 Sum_probs=184.7
Q ss_pred HHHhhhhcccccCeeceeEEEEeee------CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeC
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEG 529 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 529 (736)
+..++|.+.+.||+|+||.||+|.. ..++.||||+++... .....+.+|+.+|.++ +||||+++++++...
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 4567899999999999999999973 346789999997532 2345688999999999 689999999988654
Q ss_pred -CeEEEEEecCCCCCHhhhcccC---------------------------------------------------------
Q 041821 530 -RHRLLIYEYVEKQSLDKHLFSS--------------------------------------------------------- 551 (736)
Q Consensus 530 -~~~~lv~e~~~~gsL~~~l~~~--------------------------------------------------------- 551 (736)
...++||||+++|+|.+++...
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 5678999999999999988542
Q ss_pred ----------CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 552 ----------YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 552 ----------~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
..+++..+..++.||++||+|||+.+ ..+||+|||+++...............+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 13678888999999999999999763 3689999999986543322222223345
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCcc
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRL 684 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 684 (736)
+..|+|||.+.+..++.++||||||+++|||++ |..|+...... . .+.. ....+.
T Consensus 244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~---~~~~----~~~~~~------------ 299 (343)
T cd05103 244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-----E---EFCR----RLKEGT------------ 299 (343)
T ss_pred CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-----H---HHHH----HHhccC------------
Confidence 678999999988889999999999999999997 88887532110 0 0111 111110
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 685 KGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 685 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
....+......+.+++.+||+.||++|||+.+|+++|+.+.+.
T Consensus 300 ~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 300 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0001111234688999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.9e-32 Score=279.68 Aligned_cols=234 Identities=23% Similarity=0.308 Sum_probs=181.2
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEeC------CeE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEG------RHR 532 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------~~~ 532 (736)
.+.|++.+.||+|+||.||+|.. .+++.||+|.+.........+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 84 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence 35577788999999999999995 4588999999976666667788999999998 699999999998753 468
Q ss_pred EEEEecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRG 594 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~ 594 (736)
++||||+++++|.+++... ..+++..+..++.|++.||+|||++++ .+||+|||+++.....
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~ 164 (272)
T cd06637 85 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 164 (272)
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccc
Confidence 9999999999999998763 368999999999999999999997643 6899999999865432
Q ss_pred CCcceeecccccCcccChhccc-----CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 595 SNSSQFSQIRGTKGYMAPEWAS-----NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
.. ......|++.|+|||++. +..++.++|||||||++|||++|+.||...... ... ... .
T Consensus 165 ~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~--------~~~-~~~----~ 229 (272)
T cd06637 165 VG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM--------RAL-FLI----P 229 (272)
T ss_pred cc--cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH--------HHH-HHH----h
Confidence 21 234466899999999986 345888999999999999999999998632110 000 000 0
Q ss_pred hhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 670 YEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 670 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
....+.. .....+..+.+++.+||+.||.+|||+.+|+++
T Consensus 230 --------~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 230 --------RNPAPRL---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred --------cCCCCCC---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 0000000 111234568899999999999999999999864
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.3e-32 Score=282.82 Aligned_cols=239 Identities=24% Similarity=0.338 Sum_probs=184.6
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
+..++.+.++||+|+||.||++... ++..+|+|.+.... ...+.+.+|++++++++|+||+++++++.+....
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPL 82 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCce
Confidence 3456778899999999999999632 35689999986543 3456789999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCC---------------CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccE
Q 041821 533 LLIYEYVEKQSLDKHLFSSY---------------FLGWKERFKVALGTAKGLAYLHHDE----------------FEPK 581 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~---------------~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~k 581 (736)
+++|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ..+|
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~k 162 (280)
T cd05092 83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVK 162 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEE
Confidence 99999999999999986542 4789999999999999999999764 3689
Q ss_pred EcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHH
Q 041821 582 IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRF 660 (736)
Q Consensus 582 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~ 660 (736)
|+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||..... . ..
T Consensus 163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~---~~ 233 (280)
T cd05092 163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN------T---EA 233 (280)
T ss_pred ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH------H---HH
Confidence 999999976543322111223345788999999998899999999999999999998 8888753211 0 00
Q ss_pred HHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 661 VREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
.. ...... . ...+...+..+.+++.+||+.||++||++.+|++.|++
T Consensus 234 ~~----~~~~~~--------~----~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 234 IE----CITQGR--------E----LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HH----HHHcCc--------c----CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 00 000000 0 01112234568899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.6e-32 Score=281.58 Aligned_cols=233 Identities=24% Similarity=0.279 Sum_probs=183.1
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
+|+..++||+|+||+||++.. .+++.||||.+.... .....+.+|+.++++++||||+++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 467788999999999999995 468999999996532 223457789999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcce
Q 041821 538 YVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~ 599 (736)
|+++|+|.+++... ..+++..+..++.|++.||.|||+.++ .++|+|||+++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~--- 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET--- 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc---
Confidence 99999999888643 368999999999999999999997643 689999999987543322
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||...... ... ..+...+...
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-----~~~----~~~~~~~~~~-------- 220 (285)
T cd05605 158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-----VKR----EEVERRVKED-------- 220 (285)
T ss_pred cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-----hHH----HHHHHHhhhc--------
Confidence 23457899999999999888999999999999999999999999743211 000 1111110000
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
....+...+..+.+++.+||+.||++|| ++++++++
T Consensus 221 -----~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 221 -----QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred -----ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 0112233456788999999999999999 88898776
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=281.04 Aligned_cols=249 Identities=21% Similarity=0.235 Sum_probs=191.4
Q ss_pred HHHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
|...+|++.++||+|+||+||++.. .+++.||+|.+... ....+.+.+|+++++.++||||+++++++......++|
T Consensus 2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 2 LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred ccHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence 4567788999999999999999995 45889999988543 23456789999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEcccCcccccCCCCCcc
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~~~~~~~~~~ 598 (736)
|||+++++|.+++...+.+++..+..++.+++.||.|||+. +..++|+|||++.......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--- 158 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--- 158 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc---
Confidence 99999999999988777899999999999999999999963 2368999999987543221
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||.......+.. .....+..... .
T Consensus 159 -~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~-~~~~~~~~~~~------------~ 224 (284)
T cd06620 159 -ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ-DDPMGILDLLQ------------Q 224 (284)
T ss_pred -cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh-hhhhHHHHHHH------------H
Confidence 223568999999999988889999999999999999999999997543221100 00011111111 1
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
+.............+..+.+++.+||+.||++|||+.||+++..-+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~ 270 (284)
T cd06620 225 IVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI 270 (284)
T ss_pred HhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 1111000001112445788999999999999999999999985443
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.6e-32 Score=282.01 Aligned_cols=241 Identities=26% Similarity=0.340 Sum_probs=187.7
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCC------CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD------GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG 529 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 529 (736)
+|....+.+.+.||+|+||.||+|.... +..||+|.+.... .....+.+|+.+++.++||||+++++++...
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG 81 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC
Confidence 3556778889999999999999998532 3689999986543 3345688999999999999999999999999
Q ss_pred CeEEEEEecCCCCCHhhhcccCC----------CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEc
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSSY----------FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIA 583 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~~----------~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~ 583 (736)
...++||||+++++|.+++.... .+++..+..++.|++.||.|||+.+ ..+||+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEEC
Confidence 99999999999999999986422 4688899999999999999999753 368999
Q ss_pred ccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHH
Q 041821 584 DFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVR 662 (736)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 662 (736)
|||+++.+.............++..|+|||.+.+..++.++|||||||++|||++ |..||..... .....
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---------~~~~~ 232 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN---------EEVLK 232 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH---------HHHHH
Confidence 9999986654332222233456789999999988889999999999999999998 8888753211 11111
Q ss_pred HHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 663 EVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
.. .... ....+...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus 233 ~~----~~~~------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 233 FV----IDGG------------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HH----hcCC------------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 11 0000 001122235678899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.7e-32 Score=278.34 Aligned_cols=240 Identities=28% Similarity=0.395 Sum_probs=191.4
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
++....+.+.+.||+|+||.||+|...+++.||||.+.......+.+.+|+.++++++|+||+++++++......++|||
T Consensus 2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 2 EIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred ccchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 35567888999999999999999998778899999998766667789999999999999999999999999899999999
Q ss_pred cCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 538 YVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|+++++|.+++.... .+++..+..++.|++.||.|||+.+ ..+||+|||+++........ .
T Consensus 82 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~ 160 (261)
T cd05034 82 YMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT-A 160 (261)
T ss_pred ccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhh-h
Confidence 999999999997643 6899999999999999999999764 36899999999876532111 1
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ........ ..
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---------~~~~~~~~----~~------- 220 (261)
T cd05034 161 REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN---------REVLEQVE----RG------- 220 (261)
T ss_pred hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---------HHHHHHHH----cC-------
Confidence 122234578999999998889999999999999999998 8888853210 01111110 00
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
.....+...+..+.+++.+|++.+|++||+++++++.|+.
T Consensus 221 -----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 221 -----YRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 0011111224578899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.4e-32 Score=290.75 Aligned_cols=251 Identities=19% Similarity=0.292 Sum_probs=180.1
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeC-----CeEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG-----RHRL 533 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 533 (736)
+|++.++||+|+||.||+|+. .+++.||||++... ......+.+|+.++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 367889999999999999994 46899999998642 22345688999999999999999999988643 2479
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
+||||+. ++|.+++.....+++..+..++.||++||.|||+.+ ..+||+|||+++........
T Consensus 81 lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 159 (338)
T cd07859 81 VVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 159 (338)
T ss_pred EEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCc
Confidence 9999995 799999987778999999999999999999999763 36899999999865432221
Q ss_pred -ceeecccccCcccChhcccC--CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHH-------HHHHH
Q 041821 598 -SQFSQIRGTKGYMAPEWASN--LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR-------EVKRK 667 (736)
Q Consensus 598 -~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~ 667 (736)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ........ .....
T Consensus 160 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV-----HQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH-----HHHHHHHHHhCCCCHHHHHH
Confidence 11234579999999999875 67899999999999999999999998643210 00000000 00000
Q ss_pred Hhhhc-cccccccccCccCCCCC---HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 668 ILYEE-EAWIEEIVDPRLKGKFN---TNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 668 ~~~~~-~~~~~~~~d~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+.... ......+... ...... +.....+.+++.+||+.||++|||++|++++
T Consensus 235 i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 235 VRNEKARRYLSSMRKK-QPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhhhhHHHHHHhhccc-CCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000 0000000000 000000 1123567899999999999999999999976
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.9e-32 Score=292.09 Aligned_cols=231 Identities=22% Similarity=0.276 Sum_probs=176.7
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
..+++.++||+|+||.||+|+. .+++.||||++.... ...+.+.+|+++++.++|+||+++++++.+.+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 3455678999999999999995 468999999986432 3346788999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+++++|.... ...+..+..++.||++||.|||+.+ ..+||+|||+++.+..... ....
T Consensus 154 ~~~~~L~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--~~~~ 227 (353)
T PLN00034 154 MDGGSLEGTH----IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD--PCNS 227 (353)
T ss_pred CCCCcccccc----cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc--cccc
Confidence 9999987532 3567888899999999999999753 3689999999987654322 1234
Q ss_pred ccccCcccChhcccC-----CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 603 IRGTKGYMAPEWASN-----LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
..||..|+|||++.. ...+.++|||||||++|||++|+.||...... .......... ..
T Consensus 228 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~------~~~~~~~~~~----~~------ 291 (353)
T PLN00034 228 SVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG------DWASLMCAIC----MS------ 291 (353)
T ss_pred cccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc------cHHHHHHHHh----cc------
Confidence 579999999998743 23456999999999999999999999722111 1111111100 00
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.....+......+.+|+.+||+.||++|||+.||+++
T Consensus 292 ------~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 292 ------QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ------CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011122345678999999999999999999999987
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=5e-32 Score=303.55 Aligned_cols=233 Identities=19% Similarity=0.230 Sum_probs=183.2
Q ss_pred hhhcccccCeeceeEEEEeeeC-C-CcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-D-GRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
.|.+.+.||+|+||.||+|... + ++.||+|.+.... .....+.+|+.+|+.++|||||++++++..++..+|||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 3788899999999999999843 3 6788999875433 33356788999999999999999999999999999999999
Q ss_pred CCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 540 EKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 540 ~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
++|+|.+++.. ..++++.++..++.||+.||.|||+.+ ..+||+|||+++..........
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~ 227 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDV 227 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccccc
Confidence 99999987753 336899999999999999999999763 3689999999987654332222
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....+||+.|||||++.+..++.++|||||||++|||++|+.||..... .... .....+.
T Consensus 228 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~---------~~~~----~~~~~~~------- 287 (478)
T PTZ00267 228 ASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ---------REIM----QQVLYGK------- 287 (478)
T ss_pred ccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH---------HHHH----HHHHhCC-------
Confidence 3456799999999999999999999999999999999999999863210 1111 1111111
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+ ..+......+.+++.+||+.||++||++.+++.+
T Consensus 288 ~~-----~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 288 YD-----PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred CC-----CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 00 1122334578899999999999999999998753
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.1e-32 Score=293.39 Aligned_cols=254 Identities=17% Similarity=0.199 Sum_probs=183.3
Q ss_pred HHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
....|.+.++||+|+||.||+++. ..++.||+|.... ..+.+|+++|++++|||||++++++......++|+|+
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 345688999999999999999994 4588999997532 3467899999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+. ++|..++.....+++.+++.++.||+.||.|||+.++ .+||+|||+|+....... .....
T Consensus 165 ~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~-~~~~~ 242 (391)
T PHA03212 165 YK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA-NKYYG 242 (391)
T ss_pred CC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc-ccccc
Confidence 95 7899988777789999999999999999999997643 689999999975432221 12345
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCcc--chhHHHHHHHHHHH---HHhhhcccccc
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEG--QEAELKRFVREVKR---KILYEEEAWIE 677 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~ 677 (736)
..||+.|+|||++.+..++.++|||||||++|||++|+.|+......... ....+..+...... .........+.
T Consensus 243 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~ 322 (391)
T PHA03212 243 WAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLD 322 (391)
T ss_pred ccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHH
Confidence 67999999999999999999999999999999999999887533211100 00111111110000 00000000000
Q ss_pred c---------cccCccCCCC--CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 678 E---------IVDPRLKGKF--NTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 678 ~---------~~d~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ...+..+... ....+..+.+|+.+||+.||++|||+.|++++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 323 EIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0 0001000000 01234578899999999999999999999975
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.4e-32 Score=294.48 Aligned_cols=238 Identities=17% Similarity=0.157 Sum_probs=183.7
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
+....|++.+.||+|+||.||+++.. +++.||+|.+.+.. ...+.+.+|+.+++.++||||+++++++.+++..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34567888999999999999999954 58899999996422 23345778999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
+||||+++|+|.+++... .+++..+..++.||+.||.|||+.+ ..+||+|||+++........
T Consensus 120 lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~ 198 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV 198 (370)
T ss_pred EEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcc
Confidence 999999999999988654 5889999999999999999999763 37899999999876443221
Q ss_pred ceeecccccCcccChhcccCC----CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 598 SQFSQIRGTKGYMAPEWASNL----PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
......||+.|||||++.+. .++.++|||||||++|||++|+.||..... ..... .+....
T Consensus 199 -~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~---------~~~~~----~i~~~~- 263 (370)
T cd05596 199 -RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL---------VGTYS----KIMDHK- 263 (370)
T ss_pred -cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH---------HHHHH----HHHcCC-
Confidence 12345799999999998653 478999999999999999999999974311 00111 111000
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSK--RPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 720 (736)
. .+.-......+..+.+++.+||+.+|++ ||++.+++++
T Consensus 264 ---~-----~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 264 ---N-----SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred ---C-----cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0 0000111123467888999999999987 9999999876
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.8e-32 Score=288.24 Aligned_cols=225 Identities=22% Similarity=0.241 Sum_probs=178.4
Q ss_pred cccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|+||.||+|+.. +++.||||+++... ...+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999954 47899999996532 2335577899998866 799999999999999999999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
++|..++.....+++..+..++.||+.||.|||+.+ ..+||+|||+++....... ......|
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~g 158 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV--TTTTFCG 158 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc--ccccccc
Confidence 999999988778999999999999999999999763 3689999999975433222 1344679
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
|+.|+|||++.+..++.++|||||||++|||++|+.||..... ..... .+.... .
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~---------~~~~~----~i~~~~------~------ 213 (321)
T cd05591 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE---------DDLFE----SILHDD------V------ 213 (321)
T ss_pred CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH---------HHHHH----HHHcCC------C------
Confidence 9999999999998999999999999999999999999974321 01111 111100 0
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCC-------CHHHHHHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRP-------TMDSVVQS 720 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RP-------s~~evl~~ 720 (736)
..+......+.+++.+||+.||++|| ++.+++++
T Consensus 214 -~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 214 -LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred -CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 11112345788899999999999999 88888866
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=280.98 Aligned_cols=251 Identities=25% Similarity=0.291 Sum_probs=185.4
Q ss_pred hhcccccCeeceeEEEEeee-----CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC--CeEEE
Q 041821 464 KSFKEELGRGGSGAVYKGVL-----ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG--RHRLL 534 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 534 (736)
+.+.+.||+|+||+||++.. .++..||+|.++... .....+.+|+++|++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 37788999999999988652 357789999997543 3456788999999999999999999988753 46789
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
||||+++++|.+++... .+++.++..++.|+++||.|||+.+ ..+||+|||+++.........
T Consensus 86 v~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 164 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 164 (283)
T ss_pred EecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchhh
Confidence 99999999999998764 5999999999999999999999763 368999999998765432211
Q ss_pred e-eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 599 Q-FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 599 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
. .....++..|+|||.+.+..++.++||||||+++|||++|..|+....... .............. ...
T Consensus 165 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-------~~~~~~~~~~~~~~---~~~ 234 (283)
T cd05080 165 RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-------EEMIGPKQGQMTVV---RLI 234 (283)
T ss_pred ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-------hhhhcccccccchh---hhh
Confidence 1 112335667999999988889999999999999999999999875332110 00000000000000 011
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
+.++.......+...+..+.+++.+||+.+|++|||+++|++.|+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 235 ELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 112222222223334568899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.6e-32 Score=286.02 Aligned_cols=248 Identities=20% Similarity=0.242 Sum_probs=180.2
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+.|++.+.||+|+||.||+|+.. +++.||||++.... .....+.+|+.+++.++||||+++++++.++...++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 56888999999999999999954 68899999986533 2334577899999999999999999999999999999999
Q ss_pred CCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
++ ++|.+++... ..+++..+..++.||+.||+|||+.+ ..+||+|||+++....... ...
T Consensus 85 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~ 161 (303)
T cd07869 85 VH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSH--TYS 161 (303)
T ss_pred CC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCc--cCC
Confidence 96 6787777653 46899999999999999999999763 3689999999975433221 133
Q ss_pred cccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhc-ccc----
Q 041821 602 QIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE-EAW---- 675 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---- 675 (736)
...||+.|+|||++.+ ..++.++|||||||++|||++|..||...... ...+..... ...... ..+
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~~~~~----~~~~~~~~~~~~~~ 233 (303)
T cd07869 162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI----QDQLERIFL----VLGTPNEDTWPGVH 233 (303)
T ss_pred CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH----HHHHHHHHH----HhCCCChhhccchh
Confidence 4568999999999875 45899999999999999999999999743211 111111111 000000 000
Q ss_pred -ccccccCccCCCCC---------HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 676 -IEEIVDPRLKGKFN---------TNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 676 -~~~~~d~~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.............+ ......+.+++.+||+.||++|||+.|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 234 SLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred hccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00000000000000 0112467899999999999999999999975
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-32 Score=279.37 Aligned_cols=237 Identities=21% Similarity=0.260 Sum_probs=199.0
Q ss_pred HhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
+.-|.+.+.||+|.|+.|.+++ .-.|+.||||++.+.+ .....+.+|++.|+.++|||||+||.+......+|||+
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 3457888899999999999999 4479999999997654 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcC-----C------------CccEEcccCcccccCCCCCcc
Q 041821 537 EYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHD-----E------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~-----~------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
|+=.+|+|.++|.++. .+.+..+.+++.||+.|+.|.|.- + +-+||+|||++-.+.++..
T Consensus 97 ELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k-- 174 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK-- 174 (864)
T ss_pred EecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcch--
Confidence 9999999999987644 799999999999999999999942 2 2579999999988777654
Q ss_pred eeecccccCcccChhcccCCCCc-cccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPIT-AKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
....+|++.|-|||++.+..|+ +++||||+|||||-|++|++||+...+.+. +-
T Consensus 175 -L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET------------------------LT 229 (864)
T KOG4717|consen 175 -LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET------------------------LT 229 (864)
T ss_pred -hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh------------------------hh
Confidence 6678999999999999999887 589999999999999999999985543221 33
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hhcccc
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS--LLECET 726 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~~ 726 (736)
.++|-.+ ..|.....++.+||..||..||++|.+.+||+.+ |+.+.+
T Consensus 230 mImDCKY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 230 MIMDCKY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred hhhcccc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence 4444433 3567788899999999999999999999999875 444433
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-32 Score=288.17 Aligned_cols=225 Identities=23% Similarity=0.266 Sum_probs=177.7
Q ss_pred cccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|+||.||+|+.. +++.||||++++. ....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999954 5889999999653 22345677888888876 699999999999999999999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
|+|..++.....+++..+..++.|++.||.|||+.+ ..+||+|||+++....... ......|
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~--~~~~~~g 158 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK--TTSTFCG 158 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC--ccccccc
Confidence 999999988778999999999999999999999763 3689999999875432221 1344679
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
|+.|||||++.+..++.++|||||||++|||++|+.||..... .... ..+....
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~---------~~~~----~~i~~~~------------- 212 (320)
T cd05590 159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE---------DDLF----EAILNDE------------- 212 (320)
T ss_pred CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH---------HHHH----HHHhcCC-------------
Confidence 9999999999998999999999999999999999999964321 0111 1111100
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRPTM------DSVVQS 720 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 720 (736)
...+......+.+++.+||+.||++||++ +++++|
T Consensus 213 ~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 213 VVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred CCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 01122234578899999999999999998 666654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-32 Score=286.60 Aligned_cols=224 Identities=22% Similarity=0.281 Sum_probs=176.0
Q ss_pred cccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhc-CCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGK-IYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|+||.||+|+.. +++.||||+++.. ....+.+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999954 4789999999653 2233456778888876 4899999999999999999999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
|+|.+++.....+++.++..++.|+++||.|||+.+ ..+||+|||+++....... ......|
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g 158 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA--KTCTFCG 158 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC--ceeeecC
Confidence 999999987778999999999999999999999763 3689999999875432221 2345679
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
|+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+ ... .+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---------~~~~~~i----~~~---------~~--- 213 (316)
T cd05619 159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE---------EELFQSI----RMD---------NP--- 213 (316)
T ss_pred CccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH---------HHHHHHH----HhC---------CC---
Confidence 9999999999998999999999999999999999999863211 1111111 100 01
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRPTMD-SVVQ 719 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 719 (736)
..+......+.+++.+||+.||++||++. ++++
T Consensus 214 -~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 214 -CYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred -CCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 11122345678899999999999999996 6654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-32 Score=292.84 Aligned_cols=183 Identities=21% Similarity=0.187 Sum_probs=156.8
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.|++.+.||+|+||+||+++. .+++.||||++.+.. .....+.+|+.++.+++||||+++++.+.+....+||||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence 467889999999999999985 458899999996532 223567889999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc----
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS---- 597 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~---- 597 (736)
|+++|+|.+++.....+++..+..++.|++.||+|||+.+ ..+||+|||+++.+......
T Consensus 82 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~ 161 (363)
T cd05628 82 FLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYR 161 (363)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccc
Confidence 9999999999988888999999999999999999999763 37899999999765321100
Q ss_pred -----------------------------ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCc
Q 041821 598 -----------------------------SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNW 645 (736)
Q Consensus 598 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~ 645 (736)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 162 NLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred cccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 001235799999999999999999999999999999999999999963
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-32 Score=288.35 Aligned_cols=234 Identities=22% Similarity=0.213 Sum_probs=182.2
Q ss_pred hhcccccCeeceeEEEEeee----CCCcEEEEEEeCccc-----ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEE
Q 041821 464 KSFKEELGRGGSGAVYKGVL----ADGRAVAVKRLGDLH-----QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 533 (736)
|++.+.||+|+||.||+++. .+++.||+|++.+.. ...+.+.+|+.++.++ +||||+++++++...+..+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 67788999999999999884 357899999986422 2235578899999999 5999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
+||||+++|+|.+++.....+++.++..++.||+.||.|||+.+ ..+||+|||+++........
T Consensus 82 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~ 161 (332)
T cd05614 82 LILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKE 161 (332)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCC
Confidence 99999999999999988778999999999999999999999763 37899999999865433222
Q ss_pred ceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
......||+.|||||++.+. .++.++|||||||++|||++|+.||........ ...+ ...+..
T Consensus 162 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-----~~~~----~~~~~~------ 225 (332)
T cd05614 162 -RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-----QSEV----SRRILK------ 225 (332)
T ss_pred -ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-----HHHH----HHHHhc------
Confidence 13346799999999999865 478999999999999999999999964322111 0111 111110
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
.++. .+......+.+++.+||+.||++|| ++.+++++
T Consensus 226 ---~~~~----~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 226 ---CDPP----FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred ---CCCC----CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 1111 1222345678899999999999999 77788865
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-32 Score=287.61 Aligned_cols=225 Identities=25% Similarity=0.253 Sum_probs=178.6
Q ss_pred cccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|+||.||+++.. +++.||||++++.. .....+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999954 47899999997532 2345567899999887 699999999999999999999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
|+|..++.....+++..+..++.|++.||.|||+.+ ..+||+|||+++....... ......|
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g 158 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV--TTSTFCG 158 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC--cccceec
Confidence 999999988778999999999999999999999763 3689999999875322221 1334568
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
|+.|+|||++.+..++.++|||||||++|||++|+.||..... ..... .+... .
T Consensus 159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~---------~~~~~----~i~~~-----------~-- 212 (318)
T cd05570 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE---------DELFQ----SILED-----------E-- 212 (318)
T ss_pred CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH---------HHHHH----HHHcC-----------C--
Confidence 9999999999999999999999999999999999999863211 11111 11100 0
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRPTM-----DSVVQS 720 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 720 (736)
...+...+..+.+++.+||+.||++||++ .+++++
T Consensus 213 ~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 213 VRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 01122234578899999999999999999 888765
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=276.72 Aligned_cols=239 Identities=20% Similarity=0.278 Sum_probs=188.2
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
+.|++.+.||+|+||.||+++. .+++.+|||.+.... .....+.+|+.+++.++||||+++++++.+++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3577888999999999999994 578999999885422 23457889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC
Q 041821 537 EYVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 537 e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~ 596 (736)
||+++++|.+++.. ...+++..+..++.||++||.|||+.+ ..++|+|||++........
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc
Confidence 99999999998863 336899999999999999999999763 3689999999886644322
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
. .....|+..|+|||.+.+..++.++||||||+++|||++|..||...... ....... +
T Consensus 162 ~--~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~------------~ 220 (267)
T cd08229 162 A--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-------LYSLCKK------------I 220 (267)
T ss_pred c--cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch-------HHHHhhh------------h
Confidence 1 23456889999999999888999999999999999999999998632110 0111110 1
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.....+. .........+.+++.+||+.||++||||.+|++.++++
T Consensus 221 ~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 221 EQCDYPP---LPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred hcCCCCC---CCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1111111 11223456788999999999999999999999998865
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=280.02 Aligned_cols=227 Identities=22% Similarity=0.260 Sum_probs=177.6
Q ss_pred cCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 470 LGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 470 lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
||+|+||+||++.. .+++.||+|.+.... ...+.+..|+.++++++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 79999999999995 468899999986432 2235577899999999999999999999999999999999999999
Q ss_pred hhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeeccc
Q 041821 545 DKHLFS----SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIR 604 (736)
Q Consensus 545 ~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~ 604 (736)
..++.. ...+++..+..++.||+.||.|||+.+ ..+||+|||+++.+...... .....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~ 158 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK--TKGYA 158 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc--ccccC
Confidence 887743 336899999999999999999999763 36899999999866543321 33457
Q ss_pred ccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCcc
Q 041821 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRL 684 (736)
Q Consensus 605 gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 684 (736)
||+.|+|||++.+..++.++|||||||++|||++|+.||........ . ..... .+....
T Consensus 159 g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-----~----~~~~~-----------~~~~~~- 217 (280)
T cd05608 159 GTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-----N----KELKQ-----------RILNDS- 217 (280)
T ss_pred CCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-----H----HHHHH-----------hhcccC-
Confidence 89999999999999999999999999999999999999974321110 0 00000 011110
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 685 KGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 685 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
...+...+..+.+++.+||+.||++|| ++++++++
T Consensus 218 -~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 218 -VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred -CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 112233456788999999999999999 77888875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-32 Score=294.96 Aligned_cols=235 Identities=17% Similarity=0.117 Sum_probs=179.0
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.|.+.++||+|+||.||+++. .+++.||||++.... ...+.+.+|++++++++||||+++++++.++...+||||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 467889999999999999984 468999999986432 233567889999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc----
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS---- 597 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~---- 597 (736)
|+++|+|.+++.....+++..+..++.|++.||+|||+.+ ..+||+|||+++........
T Consensus 82 ~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 161 (377)
T cd05629 82 FLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQ 161 (377)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccccc
Confidence 9999999999988778999999999999999999999763 36899999999643211000
Q ss_pred --------c---------------------------------eeecccccCcccChhcccCCCCccccceechhHHHHHH
Q 041821 598 --------S---------------------------------QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636 (736)
Q Consensus 598 --------~---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el 636 (736)
. .....+||+.|+|||++.+..++.++|||||||++|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 241 (377)
T cd05629 162 KLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFEC 241 (377)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhh
Confidence 0 00124699999999999998999999999999999999
Q ss_pred HhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCC---CC
Q 041821 637 VKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKR---PT 713 (736)
Q Consensus 637 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps 713 (736)
++|..||..... .... .. +... ...+.-+ ........+.+++.+|++ +|.+| ++
T Consensus 242 ltG~~Pf~~~~~-----~~~~----~~----i~~~----~~~~~~p-----~~~~~s~~~~dli~~lL~-~~~~r~~r~~ 298 (377)
T cd05629 242 LIGWPPFCSENS-----HETY----RK----IINW----RETLYFP-----DDIHLSVEAEDLIRRLIT-NAENRLGRGG 298 (377)
T ss_pred hcCCCCCCCCCH-----HHHH----HH----HHcc----CCccCCC-----CCCCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence 999999963221 0000 10 0000 0000001 011223567889999997 67765 59
Q ss_pred HHHHHHH
Q 041821 714 MDSVVQS 720 (736)
Q Consensus 714 ~~evl~~ 720 (736)
+.+++++
T Consensus 299 ~~~~l~h 305 (377)
T cd05629 299 AHEIKSH 305 (377)
T ss_pred HHHHhcC
Confidence 9999887
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=277.86 Aligned_cols=236 Identities=24% Similarity=0.308 Sum_probs=181.0
Q ss_pred hhcccccCeeceeEEEEeeeCC----CcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe-----
Q 041821 464 KSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH----- 531 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 531 (736)
+.+.+.||+|+||.||+|.... +..||||+++... .....+.+|+..++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 3567899999999999998542 3679999997532 234578899999999999999999999876554
Q ss_pred -EEEEEecCCCCCHhhhcccC------CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcc
Q 041821 532 -RLLIYEYVEKQSLDKHLFSS------YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLA 588 (736)
Q Consensus 532 -~~lv~e~~~~gsL~~~l~~~------~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla 588 (736)
.++++||+++++|..++... ..+++..+..++.|++.||.|||+.+ ..+||+|||++
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 79999999999999888432 26899999999999999999999763 36899999999
Q ss_pred cccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHH
Q 041821 589 KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRK 667 (736)
Q Consensus 589 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (736)
+...............++..|+|||.+.+..++.++|||||||++|||++ |..||..... .......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~---------~~~~~~~--- 228 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN---------HEIYDYL--- 228 (273)
T ss_pred eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH---------HHHHHHH---
Confidence 87654332211222335678999999988889999999999999999999 7777753210 0111111
Q ss_pred HhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 668 ILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 668 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
..+. ....+...+..+.+++.+||+.||++|||+.||++.|+++
T Consensus 229 -~~~~------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 229 -RHGN------------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred -HcCC------------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0000 0112233456789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-32 Score=285.75 Aligned_cols=243 Identities=25% Similarity=0.335 Sum_probs=185.0
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC-CCc--EEEEEEeCcc--cccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA-DGR--AVAVKRLGDL--HQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~--~vavK~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 532 (736)
|.-..+.+.+.||+|+||.||+|+.. ++. .+|+|.++.. ....+.+.+|+.++.++ +||||+++++++..++..
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 34456788899999999999999954 343 4688887642 23446788999999999 899999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCC----------------CCCHHHHHHHHHHHHHHhhhhhcCCC----------------cc
Q 041821 533 LLIYEYVEKQSLDKHLFSSY----------------FLGWKERFKVALGTAKGLAYLHHDEF----------------EP 580 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~ 580 (736)
++||||+++++|.+++.... .+++.+++.++.|+++||+|||+.++ .+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcE
Confidence 99999999999999986432 47899999999999999999997643 68
Q ss_pred EEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHH
Q 041821 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKR 659 (736)
Q Consensus 581 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~ 659 (736)
||+|||+++....... .....++..|+|||++.+..++.++|||||||++|||++ |..||..... ..
T Consensus 164 kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---------~~ 231 (303)
T cd05088 164 KIADFGLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---------AE 231 (303)
T ss_pred EeCccccCcccchhhh---cccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh---------HH
Confidence 9999999864321111 112234668999999988889999999999999999998 9888853211 00
Q ss_pred HHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccc
Q 041821 660 FVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729 (736)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (736)
..... ... .....+...+..+.+++.+||+.+|++||++.+++++|+.+.++..
T Consensus 232 ~~~~~----~~~------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 232 LYEKL----PQG------------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred HHHHH----hcC------------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 11111 000 0001111234568899999999999999999999999988766544
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-32 Score=294.46 Aligned_cols=235 Identities=17% Similarity=0.102 Sum_probs=178.0
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.|.+.++||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.++++++||||+++++.+.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 467788999999999999994 458899999996532 233567899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC-----
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN----- 596 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~----- 596 (736)
||++|+|.+++.+...+++..+..++.||+.||+|||+.+ ..+||+|||+++.+.....
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~ 161 (382)
T cd05625 82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 161 (382)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccc
Confidence 9999999999987778999999999999999999999763 3689999999853321000
Q ss_pred ----------------------------------------cceeecccccCcccChhcccCCCCccccceechhHHHHHH
Q 041821 597 ----------------------------------------SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636 (736)
Q Consensus 597 ----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el 636 (736)
.......+||+.|||||++.+..++.++|||||||++|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~el 241 (382)
T cd05625 162 SGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 241 (382)
T ss_pred cccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHH
Confidence 0001235799999999999999999999999999999999
Q ss_pred HhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC---
Q 041821 637 VKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT--- 713 (736)
Q Consensus 637 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs--- 713 (736)
++|+.||...... .... .+... ...+...........+.+++.+|+ .+|++|++
T Consensus 242 ltG~~Pf~~~~~~-----~~~~--------~i~~~---------~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~ 298 (382)
T cd05625 242 LVGQPPFLAQTPL-----ETQM--------KVINW---------QTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNG 298 (382)
T ss_pred HhCCCCCCCCCHH-----HHHH--------HHHcc---------CCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCC
Confidence 9999999743210 0000 00000 000000111122345667777765 49999997
Q ss_pred HHHHHHH
Q 041821 714 MDSVVQS 720 (736)
Q Consensus 714 ~~evl~~ 720 (736)
+.++++|
T Consensus 299 ~~ei~~h 305 (382)
T cd05625 299 ADEIKAH 305 (382)
T ss_pred HHHHhcC
Confidence 8888765
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-32 Score=289.54 Aligned_cols=221 Identities=20% Similarity=0.181 Sum_probs=176.0
Q ss_pred cccCeeceeEEEEeee----CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 468 EELGRGGSGAVYKGVL----ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
+.||+|+||.||+++. .+++.+|+|++.... .....+.+|+++|++++||||+++++++.+++..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 357899999996532 233456789999999999999999999999999999999999
Q ss_pred CCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeeccc
Q 041821 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIR 604 (736)
Q Consensus 541 ~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~ 604 (736)
+|+|.+++.....+++..+..++.||++||.|||+.+ ..+||+|||+++....... ......
T Consensus 82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~ 159 (318)
T cd05582 82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSFC 159 (318)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC--ceeccc
Confidence 9999999987778999999999999999999999763 3689999999986543321 234467
Q ss_pred ccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCcc
Q 041821 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRL 684 (736)
Q Consensus 605 gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 684 (736)
||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....... ....
T Consensus 160 g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~---------~~~~~~i----~~~~------------ 214 (318)
T cd05582 160 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR---------KETMTMI----LKAK------------ 214 (318)
T ss_pred CChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH---------HHHHHHH----HcCC------------
Confidence 99999999999988899999999999999999999999863211 0111111 0000
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 041821 685 KGKFNTNQAATLIGIGISCVDEDRSKRPTMDS 716 (736)
Q Consensus 685 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 716 (736)
...+......+.+++.+||+.||++||++.+
T Consensus 215 -~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 215 -LGMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 0112223456888999999999999999544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=281.98 Aligned_cols=238 Identities=25% Similarity=0.325 Sum_probs=184.0
Q ss_pred hhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 464 KSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
+.+.+.||+|+||.||+|+.. ....+|+|.+.... ...+.+.+|+.+++.++||||+++++.+...+..+++
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 567789999999999999842 23578999886533 2345788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccC------------------------CCCCHHHHHHHHHHHHHHhhhhhcCC--------------
Q 041821 536 YEYVEKQSLDKHLFSS------------------------YFLGWKERFKVALGTAKGLAYLHHDE-------------- 577 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~------------------------~~l~~~~~~~i~~~i~~gL~yLH~~~-------------- 577 (736)
+||+++++|.+++... ..+++..+..++.|++.||.|||+.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~ 161 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVA 161 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEc
Confidence 9999999999987532 24788999999999999999999763
Q ss_pred --CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccch
Q 041821 578 --FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQE 654 (736)
Q Consensus 578 --~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~ 654 (736)
..+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.... .
T Consensus 162 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~ 235 (290)
T cd05045 162 EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA------P 235 (290)
T ss_pred CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC------H
Confidence 3689999999986544332222223346778999999988889999999999999999998 888875321 1
Q ss_pred hHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 655 AELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
. .+..... .......+...+..+.+++.+||+.+|++||++.+|++.|+++..
T Consensus 236 ~---~~~~~~~----------------~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 236 E---RLFNLLK----------------TGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred H---HHHHHHh----------------CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 1 1111110 001111122334578899999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-32 Score=292.34 Aligned_cols=239 Identities=17% Similarity=0.168 Sum_probs=182.4
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
++....|++.+.||+|+||.||+++.. +++.+|+|.+.+.. ...+.+.+|+.+++.++||||+++++++.+++..
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 344577889999999999999999954 58899999986422 2334578899999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~ 596 (736)
++||||+++|+|.+++... .+++..+..++.||+.||+|||+.+ ..+||+|||+++.......
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~ 197 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 197 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCc
Confidence 9999999999999998654 5899999999999999999999763 3789999999987643322
Q ss_pred cceeecccccCcccChhcccCCC----CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLP----ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (736)
. ......||+.|||||++.+.. ++.++|||||||++|||++|+.||..... ..... .+....
T Consensus 198 ~-~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~---------~~~~~----~i~~~~ 263 (370)
T cd05621 198 V-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL---------VGTYS----KIMDHK 263 (370)
T ss_pred e-ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH---------HHHHH----HHHhCC
Confidence 1 134567999999999987543 78899999999999999999999963311 00111 111000
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSK--RPTMDSVVQS 720 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 720 (736)
..+...........+.+++.+|++.+|.. ||++.|+++|
T Consensus 264 ---------~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 264 ---------NSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ---------cccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 00000111123456778888999855543 8899999987
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-32 Score=291.81 Aligned_cols=234 Identities=17% Similarity=0.101 Sum_probs=182.7
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.|.+.+.||+|+||.||+++. .+++.||||+++... ...+.+.+|+.+++.++||||+++++++.+.+..+||||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 467889999999999999995 458899999997532 234567889999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 538 YVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 538 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|+++|+|.+++... ..+++..+..++.||+.||.|||+.+ ..+||+|||+++.+...... ..
T Consensus 82 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~-~~ 160 (330)
T cd05601 82 YQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV-NS 160 (330)
T ss_pred CCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCce-ee
Confidence 99999999999875 57999999999999999999999753 37899999999876543322 22
Q ss_pred ecccccCcccChhccc------CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 601 SQIRGTKGYMAPEWAS------NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~------~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
....||+.|+|||++. ...++.++|||||||++|||++|+.||..... .. ... .+..
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~----~~~----~i~~---- 223 (330)
T cd05601 161 KLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS-----AK----TYN----NIMN---- 223 (330)
T ss_pred ecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH-----HH----HHH----HHHc----
Confidence 3457999999999986 45678999999999999999999999863211 00 011 1100
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
....+. .......+..+.+|+.+|++ +|++||++.+++++
T Consensus 224 -~~~~~~----~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 224 -FQRFLK----FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred -CCCccC----CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 000000 00111234568889999998 99999999999875
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-32 Score=285.27 Aligned_cols=244 Identities=25% Similarity=0.308 Sum_probs=188.9
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC--------CCcEEEEEEeCcc--cccHHHHHHHHHHHhcC-CCCceeeEEEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA--------DGRAVAVKRLGDL--HQGEEVFWAEVSTIGKI-YHMNLVRMWGFC 526 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 526 (736)
++....+.+.+.||+|+||.||+++.. ++..||+|.+... ....+.+.+|+.+++.+ +||||+++++++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 456778888999999999999999731 2457999998653 23446788999999999 899999999999
Q ss_pred EeCCeEEEEEecCCCCCHhhhcccC----------------CCCCHHHHHHHHHHHHHHhhhhhcCCC------------
Q 041821 527 SEGRHRLLIYEYVEKQSLDKHLFSS----------------YFLGWKERFKVALGTAKGLAYLHHDEF------------ 578 (736)
Q Consensus 527 ~~~~~~~lv~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~i~~gL~yLH~~~~------------ 578 (736)
......++||||+++++|.+++... ..+++.++..++.||++||.|||++++
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili 170 (304)
T cd05101 91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV 170 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE
Confidence 9999999999999999999998653 247888999999999999999997643
Q ss_pred ----ccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccc
Q 041821 579 ----EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQ 653 (736)
Q Consensus 579 ----~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~ 653 (736)
.+||+|||+++...............+++.|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------ 244 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------ 244 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC------
Confidence 679999999987654332222233446778999999998889999999999999999998 677764221
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 654 EAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
...+.. .+.... ....+...+..+.+++.+||+.+|++|||+.+|++.|+++..
T Consensus 245 ---~~~~~~----~~~~~~------------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 245 ---VEELFK----LLKEGH------------RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred ---HHHHHH----HHHcCC------------cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 111111 111110 011122345678899999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=279.96 Aligned_cols=242 Identities=22% Similarity=0.293 Sum_probs=186.0
Q ss_pred HHhhhhcccccCeeceeEEEEeee-CCCc----EEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVL-ADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~----~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
...++++.++||+|+||.||+|+. .+++ .||+|.++.. ....+.+.+|+.+++.++||||+++++++... ..
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~ 83 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TV 83 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-Cc
Confidence 456678889999999999999984 3444 4899998643 23456788999999999999999999999764 56
Q ss_pred EEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGS 595 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~ 595 (736)
++++||+++|+|.+++... ..+++..+..++.|+++||+|||+.++ .+||+|||+++......
T Consensus 84 ~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~ 163 (279)
T cd05109 84 QLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE 163 (279)
T ss_pred EEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeeccccc
Confidence 7999999999999999764 468999999999999999999997643 68999999998775433
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.........++..|+|||.+.+..++.++|||||||++|||++ |..||.... ... ....+ ...
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~---~~~~~----~~~--- 227 (279)
T cd05109 164 TEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP------ARE---IPDLL----EKG--- 227 (279)
T ss_pred ceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC------HHH---HHHHH----HCC---
Confidence 2221222345678999999998889999999999999999998 888875321 000 11111 000
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
.....+...+..+.+++.+||+.||++||++.++++.|+.+..+
T Consensus 228 ---------~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 228 ---------ERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred ---------CcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 00111223345788999999999999999999999999887544
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=276.08 Aligned_cols=235 Identities=24% Similarity=0.383 Sum_probs=186.2
Q ss_pred hhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
..+++.+.||+|+||.||++...++..+|+|.+.........+.+|++++++++||||+++++++......++||||+++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 46778899999999999999977788999999976655667799999999999999999999999999999999999999
Q ss_pred CCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceeeccc
Q 041821 542 QSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIR 604 (736)
Q Consensus 542 gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~~~~ 604 (736)
++|.+++... ..+++..+..++.|++.||+|||+.++ .+||+|||+++......... .....
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~-~~~~~ 162 (256)
T cd05112 84 GCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS-STGTK 162 (256)
T ss_pred CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccc-cCCCc
Confidence 9999998764 368999999999999999999997643 68999999997654322111 12233
Q ss_pred ccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 605 gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
++..|+|||.+.+..++.++||||||+++|||++ |..||..... ....... ..+ .....+.
T Consensus 163 ~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---------~~~~~~~----~~~-----~~~~~~~ 224 (256)
T cd05112 163 FPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN---------SEVVETI----NAG-----FRLYKPR 224 (256)
T ss_pred cchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH---------HHHHHHH----hCC-----CCCCCCC
Confidence 5678999999998889999999999999999998 8888863210 1111111 000 0111111
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
..+..+.+|+.+||+.+|++|||+.+|+++|.
T Consensus 225 -------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 225 -------LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred -------CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 12467889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=273.95 Aligned_cols=229 Identities=25% Similarity=0.338 Sum_probs=179.8
Q ss_pred cccCeeceeEEEEeeeCCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCHh
Q 041821 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLD 545 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 545 (736)
+.||+|+||.||+|...++..+|+|.+.... .....+.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 4699999999999998788999999986543 23456889999999999999999999999999999999999999999
Q ss_pred hhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccccCc
Q 041821 546 KHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGTKG 608 (736)
Q Consensus 546 ~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~ 608 (736)
+++... ..+++..+..++.|++.||.|||+.+ ..+||+|||++.......... .....++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~-~~~~~~~~~ 159 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS-SGLKQIPIK 159 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccccccc-CCCCCCccc
Confidence 998654 36899999999999999999999763 257999999997544322111 112234678
Q ss_pred ccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCC
Q 041821 609 YMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGK 687 (736)
Q Consensus 609 y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 687 (736)
|+|||++....++.++||||||+++|||++ |..||..... ..... ..... ....
T Consensus 160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~---------~~~~~----~~~~~------------~~~~ 214 (250)
T cd05085 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN---------QQARE----QVEKG------------YRMS 214 (250)
T ss_pred ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH---------HHHHH----HHHcC------------CCCC
Confidence 999999998889999999999999999998 8888863311 01111 11100 0111
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 688 FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 688 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
.+...+..+.+++.+|++.+|++||++.++++.|.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 215 CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 12233567899999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-32 Score=285.68 Aligned_cols=224 Identities=25% Similarity=0.279 Sum_probs=174.6
Q ss_pred cccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhc-CCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGK-IYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|+||.||+|+.. +++.||||.++... ...+.+..|..++.. .+||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999954 57899999996532 223445667777765 4899999999999999999999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
|+|..++.....+++..+..++.||+.||.|||+.+ ..+||+|||+++....... ......|
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~--~~~~~~g 158 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG--KASTFCG 158 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC--ccccccC
Confidence 999999987778999999999999999999999763 3689999999986533221 2344679
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
|+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+ ... .
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~---------~~~~~~i----~~~---------~---- 212 (316)
T cd05592 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE---------DELFDSI----LND---------R---- 212 (316)
T ss_pred CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH---------HHHHHHH----HcC---------C----
Confidence 9999999999998999999999999999999999999964321 0111111 000 0
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRPTMD-SVVQ 719 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 719 (736)
...+......+.+++.+||+.||++||++. ++++
T Consensus 213 ~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 213 PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 111222345678899999999999999875 5554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-32 Score=286.94 Aligned_cols=228 Identities=25% Similarity=0.269 Sum_probs=176.6
Q ss_pred hhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHH---hcCCCCceeeEEEEEEeCCeEEEE
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTI---GKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
|++.+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|++++ +.++||||+++++++.+.+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 45778999999999999995 458999999996532 2234566676655 567899999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|||+++++|..++.. ..+++..+..++.||+.||.|||+.+ ..+||+|||+++....... .
T Consensus 81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~--~ 157 (324)
T cd05589 81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD--R 157 (324)
T ss_pred EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC--c
Confidence 999999999988865 46999999999999999999999763 3689999999875432221 2
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.....|++.|||||++.+..++.++|||||||++|||++|+.||..... ..... .+....
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~---------~~~~~----~i~~~~------- 217 (324)
T cd05589 158 TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE---------EEVFD----SIVNDE------- 217 (324)
T ss_pred ccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH---------HHHHH----HHHhCC-------
Confidence 3446799999999999998999999999999999999999999863311 01111 111100
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
...+...+..+.+++.+||+.||.+|| ++.+++++
T Consensus 218 ------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 218 ------VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred ------CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 011222345678899999999999999 57777765
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-32 Score=290.06 Aligned_cols=225 Identities=23% Similarity=0.221 Sum_probs=179.1
Q ss_pred cccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCC
Q 041821 468 EELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 542 (736)
+.||+|+||.||+++. .+++.||+|.++... .....+.+|+++++.++||||+++++++...+..+|||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999994 468999999996532 23356778999999999999999999999999999999999999
Q ss_pred CHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhc-C----------------CCccEEcccCcccccCCCCCcceeecccc
Q 041821 543 SLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH-D----------------EFEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 543 sL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~-~----------------~~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
+|..++.....+++..+..++.||+.||.|||+ . +..+||+|||+++....... ......|
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~g 158 (325)
T cd05594 81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCG 158 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc--ccccccC
Confidence 999999877789999999999999999999996 3 23689999999875432221 1334579
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
|+.|||||++.+..++.++|||||||++|||++|+.||..... . .... .+... ..
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~------~---~~~~----~i~~~---------~~--- 213 (325)
T cd05594 159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------E---KLFE----LILME---------EI--- 213 (325)
T ss_pred CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH------H---HHHH----HHhcC---------CC---
Confidence 9999999999998999999999999999999999999963211 0 0101 00000 00
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
..+......+.+++.+||+.||++|+ ++.+++++
T Consensus 214 -~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 214 -RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred -CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 11222345688899999999999996 89999876
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-33 Score=269.09 Aligned_cols=235 Identities=22% Similarity=0.248 Sum_probs=192.7
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
..+-+.+.++||+|+||.|||+.++ .|+.+|||.+... ...+++.+|+.+|++...|++|++||.+.....+||||||
T Consensus 31 PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY 109 (502)
T KOG0574|consen 31 PEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY 109 (502)
T ss_pred hHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence 3455678899999999999999954 5999999998643 3456788999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhc-----C-----------CCccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHH-----D-----------EFEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~-----~-----------~~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|.-|++.+.++.+ .+|++.++..++...++||+|||. + ++.+||+|||.|..+...- ....
T Consensus 110 CGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM--AKRN 187 (502)
T KOG0574|consen 110 CGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM--AKRN 187 (502)
T ss_pred cCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhH--HhhC
Confidence 9999999999754 489999999999999999999994 2 4478999999997664422 2345
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
.++||+.|||||++..-.|+.++||||+|++..||..|++|+...++... .+.--..
T Consensus 188 TVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA-----------------------IFMIPT~ 244 (502)
T KOG0574|consen 188 TVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA-----------------------IFMIPTK 244 (502)
T ss_pred ccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce-----------------------eEeccCC
Confidence 68899999999999999999999999999999999999999875433211 0111111
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
|...-.-+...+..+-++++.||-.+|++|-|+.++++|
T Consensus 245 PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 245 PPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 222222356677889999999999999999999998876
|
|
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-32 Score=282.03 Aligned_cols=239 Identities=24% Similarity=0.341 Sum_probs=184.4
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 531 (736)
...++++.+.||+|+||.||++... ++..||+|.+.... ...+.+.+|+.++++++||||+++++++.++..
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 3456788899999999999999853 36789999986532 334678899999999999999999999999999
Q ss_pred EEEEEecCCCCCHhhhcccC----------------------CCCCHHHHHHHHHHHHHHhhhhhcCC------------
Q 041821 532 RLLIYEYVEKQSLDKHLFSS----------------------YFLGWKERFKVALGTAKGLAYLHHDE------------ 577 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~----------------------~~l~~~~~~~i~~~i~~gL~yLH~~~------------ 577 (736)
.++||||+++++|.+++... ..+++..++.++.|++.||.|||+.+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil 162 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL 162 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheE
Confidence 99999999999999998632 14778889999999999999999763
Q ss_pred ----CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCcc
Q 041821 578 ----FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEG 652 (736)
Q Consensus 578 ----~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~ 652 (736)
..+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 163 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~---- 238 (288)
T cd05050 163 VGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH---- 238 (288)
T ss_pred ecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH----
Confidence 3689999999876543322111222335678999999988889999999999999999997 7777752211
Q ss_pred chhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 653 QEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
.... ..+..+. . ...+...+..+.+++.+||+.||++|||+.||++.|++
T Consensus 239 -----~~~~----~~~~~~~---~---------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 -----EEVI----YYVRDGN---V---------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred -----HHHH----HHHhcCC---C---------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 1111 1111111 0 01122334678999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=278.53 Aligned_cols=239 Identities=24% Similarity=0.366 Sum_probs=184.7
Q ss_pred HhhhhcccccCeeceeEEEEeeeCC-C---cEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLAD-G---RAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
...+++.+.||+|+||.||+|+... + ..||||.++.. ....+.|..|+.++++++||||+++++++.++...++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 82 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI 82 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence 3457888999999999999999543 3 36999998653 2345678999999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 535 IYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
||||+++++|.+++... ..+++.++..++.|++.||.|||+.+ ..+||+|||+++........
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~ 162 (269)
T cd05065 83 ITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 162 (269)
T ss_pred EEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccc
Confidence 99999999999998754 46899999999999999999999763 36899999999866543322
Q ss_pred ceeeccc---ccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 598 SQFSQIR---GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 598 ~~~~~~~---gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
....... .+..|+|||.+.+..++.++|||||||++|||++ |..||..... ......+. .
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~---------~~~~~~i~----~--- 226 (269)
T cd05065 163 PTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---------QDVINAIE----Q--- 226 (269)
T ss_pred cccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH---------HHHHHHHH----c---
Confidence 1111111 2457999999998899999999999999999886 9888853210 11111110 0
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.. ....+...+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 227 -----~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 227 -----DY----RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -----CC----cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 0111223345678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=277.64 Aligned_cols=240 Identities=25% Similarity=0.375 Sum_probs=185.6
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCC-C---cEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLAD-G---RAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~---~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
....++..+.||+|+||.||+|+... + ..+|+|.++... ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 34567778899999999999999643 3 379999986542 33467889999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC
Q 041821 534 LIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~ 596 (736)
+||||+++++|.+++... ..+++.++..++.|++.||+|||+.+ ..+||+|||++........
T Consensus 83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 162 (268)
T cd05063 83 IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE 162 (268)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccc
Confidence 999999999999998754 47899999999999999999999763 3689999999986654322
Q ss_pred cce-eecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 597 SSQ-FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 597 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
... ......+..|+|||++....++.++|||||||++|||++ |+.||..... ......+ ...
T Consensus 163 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~---------~~~~~~i----~~~--- 226 (268)
T cd05063 163 GTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN---------HEVMKAI----NDG--- 226 (268)
T ss_pred cceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH---------HHHHHHH----hcC---
Confidence 111 111223457999999988889999999999999999997 9999853211 0111111 100
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.....+...+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 227 ---------~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 227 ---------FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ---------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 01111122346788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=276.32 Aligned_cols=235 Identities=21% Similarity=0.256 Sum_probs=184.9
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc------ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH------QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
.|.+.+.||+|+||.||++.. .+++.+|+|.+.... ...+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 82 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIF 82 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEE
Confidence 467788999999999999985 458999999985432 1234678899999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
+||+++++|.+++.....+++..+..++.|++.||.|||+.+ ..+||+|||+++..........
T Consensus 83 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~ 162 (263)
T cd06625 83 MEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGT 162 (263)
T ss_pred EEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccc
Confidence 999999999999987778999999999999999999999763 3789999999976543221111
Q ss_pred -eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 -FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 -~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....|+..|+|||++.+..++.++||||||+++|||++|+.||..... ..... ..
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--------~~~~~-~~-------------- 219 (263)
T cd06625 163 GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA--------MAAIF-KI-------------- 219 (263)
T ss_pred cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch--------HHHHH-HH--------------
Confidence 1234578899999999998899999999999999999999999863210 00000 00
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
.........+......+.+++.+||+.+|++|||+.+++++.
T Consensus 220 -~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 220 -ATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred -hccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence 000011122333455788899999999999999999999763
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=274.63 Aligned_cols=232 Identities=27% Similarity=0.362 Sum_probs=180.7
Q ss_pred cccCeeceeEEEEeeeCC----CcEEEEEEeCcccc--cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLAD----GRAVAVKRLGDLHQ--GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
++||+|+||.||+|.... +..+|+|.+..... ..+.+.+|+++++++.||||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 479999999999998432 26899999976443 4567899999999999999999999876 4567999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc-eeeccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS-QFSQIR 604 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~-~~~~~~ 604 (736)
++|.+++.....+++..+..++.|++.||.|||+.+ ..+||+|||+++......... ......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~ 159 (257)
T cd05060 80 GPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGR 159 (257)
T ss_pred CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCcc
Confidence 999999987778999999999999999999999763 368999999998765433221 111223
Q ss_pred ccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 605 gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
++..|+|||.+.+..++.++||||||+++|||++ |..||..... ..+..... ...
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~---------~~~~~~~~----~~~----------- 215 (257)
T cd05060 160 WPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG---------AEVIAMLE----SGE----------- 215 (257)
T ss_pred ccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH---------HHHHHHHH----cCC-----------
Confidence 4568999999998889999999999999999998 8888863210 11111111 000
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
....+...+..+.+++.+||+.+|++||++.+|++.|+++.
T Consensus 216 -~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 216 -RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred -cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 00112223467889999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-32 Score=294.75 Aligned_cols=235 Identities=15% Similarity=0.105 Sum_probs=179.4
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.|++.+.||+|+||.||+++. .+++.||||.+.... ...+.+.+|+.+|++++||||+++++.+.+++..+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 477889999999999999994 458999999996532 234567899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCC-----
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSN----- 596 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~----- 596 (736)
|+++|+|.+++.....+++..+..++.||+.||+|||+.++ .+||+|||+|..+.....
T Consensus 82 ~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~ 161 (376)
T cd05598 82 YIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 161 (376)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccc
Confidence 99999999999887789999999999999999999997633 689999999853321000
Q ss_pred ------------------------------------cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCC
Q 041821 597 ------------------------------------SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI 640 (736)
Q Consensus 597 ------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~ 640 (736)
.......+||+.|||||++.+..++.++|||||||++|||++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~ 241 (376)
T cd05598 162 KGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQ 241 (376)
T ss_pred cccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCC
Confidence 00012357999999999999999999999999999999999999
Q ss_pred CCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC---CHHHH
Q 041821 641 RLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP---TMDSV 717 (736)
Q Consensus 641 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~ev 717 (736)
.||...... .... .+... .... . ..........+.+++.+|+ .+|.+|+ ++.++
T Consensus 242 ~Pf~~~~~~-----~~~~--------~i~~~----~~~~-~----~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 242 PPFLADTPA-----ETQL--------KVINW----ETTL-H----IPSQAKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred CCCCCCCHH-----HHHH--------HHhcc----Cccc-c----CCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 999743210 0000 00000 0000 0 0011122345667777766 5999999 89999
Q ss_pred HHH
Q 041821 718 VQS 720 (736)
Q Consensus 718 l~~ 720 (736)
+++
T Consensus 299 l~h 301 (376)
T cd05598 299 KAH 301 (376)
T ss_pred hCC
Confidence 977
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=275.11 Aligned_cols=233 Identities=27% Similarity=0.396 Sum_probs=187.7
Q ss_pred HhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
...+++.+.||+|+||.||+|... ++.||||.++......+++.+|+.++++++|+||+++++++.+....++||||++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 456788899999999999999874 7899999997665556788999999999999999999999999999999999999
Q ss_pred CCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 541 KQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 541 ~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+++|.+++.... .+++..+..++.|++.||.|||+.+ ..+||+|||+++....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-----~ 158 (256)
T cd05039 84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-----S 158 (256)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccc-----c
Confidence 999999997655 6899999999999999999999764 3689999999987633221 2
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
..++..|+|||.+....++.++||||||+++|||++ |..||.... ...+..... ..
T Consensus 159 ~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~---------~~~~~~~~~----~~---------- 215 (256)
T cd05039 159 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP---------LKDVVPHVE----KG---------- 215 (256)
T ss_pred CCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC---------HHHHHHHHh----cC----------
Confidence 334668999999988889999999999999999997 888875321 011111110 00
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.....+...+..+.+++.+||+.+|++|||+.+++++|+++
T Consensus 216 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 216 --YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred --CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 01111222346788999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-32 Score=302.05 Aligned_cols=235 Identities=19% Similarity=0.229 Sum_probs=184.0
Q ss_pred HhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC------
Q 041821 461 KSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR------ 530 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 530 (736)
..+|.+.+.||+|+||+||+++ ..+++.||||++... ......+.+|+.++..++|+||+++++.+...+
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~ 110 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPEN 110 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCccc
Confidence 3578899999999999999998 456899999998643 233456789999999999999999988775432
Q ss_pred --eEEEEEecCCCCCHhhhcccC----CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcc
Q 041821 531 --HRLLIYEYVEKQSLDKHLFSS----YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLA 588 (736)
Q Consensus 531 --~~~lv~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla 588 (736)
..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ ..+||+|||++
T Consensus 111 ~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls 190 (496)
T PTZ00283 111 VLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFS 190 (496)
T ss_pred ceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccC
Confidence 367999999999999988642 36899999999999999999999753 36899999999
Q ss_pred cccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHH
Q 041821 589 KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKI 668 (736)
Q Consensus 589 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (736)
+...............||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...+.. ..
T Consensus 191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~---------~~~~~~----~~ 257 (496)
T PTZ00283 191 KMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN---------MEEVMH----KT 257 (496)
T ss_pred eeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC---------HHHHHH----HH
Confidence 87654333222345679999999999999999999999999999999999999986321 111111 11
Q ss_pred hhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 669 LYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 669 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+. . ...+...+..+.+++.+||+.||++||++.+++++
T Consensus 258 ~~~~-------~-----~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 258 LAGR-------Y-----DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred hcCC-------C-----CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1110 0 11223345678899999999999999999999875
|
|
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=286.45 Aligned_cols=229 Identities=21% Similarity=0.214 Sum_probs=179.5
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEe
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 537 (736)
|++.+.||+|+||.||+|+.. +++.||||.+.+.. ...+.+..|..++..+ +|++|+++++++.+.+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 667889999999999999954 57899999986532 2234567788888777 58999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|+++|+|..++.....+++..+..++.||+.||+|||+.+ ..+||+|||+++....... ...
T Consensus 82 ~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~--~~~ 159 (323)
T cd05616 82 YVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGV--TTK 159 (323)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCC--ccc
Confidence 9999999999987778999999999999999999999753 3689999999975432221 134
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+ ...
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~---------~~~~~~i----~~~---------- 216 (323)
T cd05616 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---------DELFQSI----MEH---------- 216 (323)
T ss_pred cCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH---------HHHHHHH----HhC----------
Confidence 46799999999999999999999999999999999999999964321 1111111 110
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM-----DSVVQS 720 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 720 (736)
. ...+......+.+++.+|++.||++|++. .+++++
T Consensus 217 -~--~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 217 -N--VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred -C--CCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 0 11222334678899999999999999984 566543
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=286.45 Aligned_cols=229 Identities=21% Similarity=0.235 Sum_probs=179.7
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCC-CceeeEEEEEEeCCeEEEEEe
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYH-MNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e 537 (736)
|++.+.||+|+||.||+|+.. +++.||||++... ....+.+..|++++..+.| ++|+++++++.+.+..++|||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 678899999999999999954 4789999999653 2334567889999999976 468889999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|+++|+|.+++.....+++..+..++.||+.||.|||+.+ ..+||+|||+++....... ...
T Consensus 82 ~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~--~~~ 159 (324)
T cd05587 82 YVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK--TTR 159 (324)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC--cee
Confidence 9999999999988778999999999999999999999763 3689999999875332221 234
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+ ...
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---------~~~~~~i----~~~---------- 216 (324)
T cd05587 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE---------DELFQSI----MEH---------- 216 (324)
T ss_pred eecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---------HHHHHHH----HcC----------
Confidence 56799999999999999999999999999999999999999963311 0111111 000
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM-----DSVVQS 720 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 720 (736)
....+......+.+++.+||+.||++||+. .+++++
T Consensus 217 ---~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 217 ---NVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred ---CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 011122234567899999999999999976 566554
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=279.68 Aligned_cols=244 Identities=23% Similarity=0.291 Sum_probs=186.4
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG 529 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 529 (736)
++...+|++.+.||+|+||.||+|... .+..||+|.+.... .....+.+|+.++++++||||+++++++.+.
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 345678899999999999999999743 24589999986543 2334678999999999999999999999999
Q ss_pred CeEEEEEecCCCCCHhhhcccC----------CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEc
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSS----------YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIA 583 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~----------~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~ 583 (736)
...++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ ..+||+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEEC
Confidence 9999999999999999999642 23567888999999999999999764 368999
Q ss_pred ccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHH
Q 041821 584 DFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVR 662 (736)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 662 (736)
|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||..... .. .
T Consensus 162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~------~~---~-- 230 (288)
T cd05061 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN------EQ---V-- 230 (288)
T ss_pred cCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH------HH---H--
Confidence 9999986544332221222345678999999998889999999999999999998 6777753210 00 1
Q ss_pred HHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 663 EVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
......+. . ...+...+..+.+++.+||+.||++|||+.++++.|.+...
T Consensus 231 --~~~~~~~~---~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 280 (288)
T cd05061 231 --LKFVMDGG---Y---------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 280 (288)
T ss_pred --HHHHHcCC---C---------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC
Confidence 11111100 0 01112234679999999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=276.75 Aligned_cols=235 Identities=23% Similarity=0.306 Sum_probs=177.7
Q ss_pred hcccccCeeceeEEEEeeeCC-Cc--EEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeC------CeE
Q 041821 465 SFKEELGRGGSGAVYKGVLAD-GR--AVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG------RHR 532 (736)
Q Consensus 465 ~~~~~lG~G~fg~Vy~~~~~~-~~--~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~ 532 (736)
.+.++||+|+||.||+|.... +. .+|+|.++.. ....+.+.+|+.+++.++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456889999999999999654 32 6999998653 23346788999999999999999999987542 246
Q ss_pred EEEEecCCCCCHhhhccc------CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccc
Q 041821 533 LLIYEYVEKQSLDKHLFS------SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKL 590 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~------~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~ 590 (736)
+++|||+++|+|.+++.. ...+++..+..++.|++.||+|||+++ ..+||+|||+++.
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccc
Confidence 899999999999988742 125889999999999999999999763 3689999999987
Q ss_pred cCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 591 SQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
..............+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ..... .+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---------~~~~~----~~~ 228 (272)
T cd05075 162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN---------SEIYD----YLR 228 (272)
T ss_pred cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH---------HHHHH----HHH
Confidence 654332111122345678999999998899999999999999999999 7788753210 01111 111
Q ss_pred hhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 670 YEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 670 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.+. . ...+...+..+.+++.+||+.||++|||+.+|+++|+++
T Consensus 229 ~~~---~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 229 QGN---R---------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred cCC---C---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 110 0 011222345688999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=274.29 Aligned_cols=230 Identities=24% Similarity=0.317 Sum_probs=184.6
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
|.+.+.||+|+||.||+++.. +++.|++|.+... ....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA 81 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence 567789999999999999954 5899999998642 234567889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 540 EKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 540 ~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
++++|.+++... ..+++..+..++.|++.||.|||+.+ ..+||+|||+++........ ..
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~--~~ 159 (256)
T cd08529 82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF--AN 159 (256)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccch--hh
Confidence 999999998764 47899999999999999999999763 36899999999876543221 23
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
...|++.|+|||++.+..++.++||||||++++||++|+.||..... .... .....+.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---------~~~~----~~~~~~~--------- 217 (256)
T cd08529 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ---------GALI----LKIIRGV--------- 217 (256)
T ss_pred ccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH---------HHHH----HHHHcCC---------
Confidence 45688999999999998999999999999999999999999863321 0011 1111100
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
....+......+.+++.+||+.+|++||++.+++++
T Consensus 218 ---~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 218 ---FPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ---CCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 011122344678999999999999999999999875
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=283.70 Aligned_cols=244 Identities=25% Similarity=0.308 Sum_probs=186.8
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC--------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA--------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFC 526 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 526 (736)
++...++.+.++||+|+||.||+++.. ....+|+|.++... .....+.+|+.+++++ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 345567888999999999999999732 24579999987532 3345688999999999 699999999999
Q ss_pred EeCCeEEEEEecCCCCCHhhhcccC----------------CCCCHHHHHHHHHHHHHHhhhhhcCCC------------
Q 041821 527 SEGRHRLLIYEYVEKQSLDKHLFSS----------------YFLGWKERFKVALGTAKGLAYLHHDEF------------ 578 (736)
Q Consensus 527 ~~~~~~~lv~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~i~~gL~yLH~~~~------------ 578 (736)
.+....+++|||+++|+|.+++... ..+++.++..++.|++.||.|||+.++
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill 167 (314)
T cd05099 88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV 167 (314)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE
Confidence 9999999999999999999998642 248899999999999999999997633
Q ss_pred ----ccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccc
Q 041821 579 ----EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQ 653 (736)
Q Consensus 579 ----~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~ 653 (736)
.+||+|||+++...............++..|||||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~----- 242 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV----- 242 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH-----
Confidence 689999999986654322211222234568999999998889999999999999999999 7888753210
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 654 EAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
..+... ..... ....+...+..+.+++.+||+.+|++|||+.++++.|+++..
T Consensus 243 ----~~~~~~----~~~~~------------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 243 ----EELFKL----LREGH------------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred ----HHHHHH----HHcCC------------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 011111 10000 011122334578899999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-32 Score=285.87 Aligned_cols=225 Identities=25% Similarity=0.292 Sum_probs=181.9
Q ss_pred ccccCeeceeEEEEee-eCCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 467 KEELGRGGSGAVYKGV-LADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
.+.||.|+||.||-++ ..+.+.||||++.-+. ..-..+++|+..|+++.|||+|.+.|+|......|||||||-
T Consensus 31 LrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl- 109 (948)
T KOG0577|consen 31 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL- 109 (948)
T ss_pred HHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-
Confidence 4579999999999999 5568899999996532 223568999999999999999999999999999999999996
Q ss_pred CCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceeeccc
Q 041821 542 QSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFSQIR 604 (736)
Q Consensus 542 gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~~~~ 604 (736)
|+-.+++.-. .++.+.++..|..+.+.||+|||+. .+.+||+|||.|....+ ...++
T Consensus 110 GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P------AnsFv 183 (948)
T KOG0577|consen 110 GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP------ANSFV 183 (948)
T ss_pred ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc------hhccc
Confidence 7777777643 4799999999999999999999965 33789999999987655 44678
Q ss_pred ccCcccChhccc---CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 605 GTKGYMAPEWAS---NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 605 gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
|||.|||||++. .+.|+-|+||||+|++..||.-+++|...+... .... . +.+.-.
T Consensus 184 GTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM---------SALY----H--------IAQNes 242 (948)
T KOG0577|consen 184 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---------SALY----H--------IAQNES 242 (948)
T ss_pred CCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH---------HHHH----H--------HHhcCC
Confidence 999999999985 467999999999999999999999997643211 0001 1 122222
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
|.+. ..+.+..+..++..||+.-|++|||..+++.|--
T Consensus 243 PtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~f 280 (948)
T KOG0577|consen 243 PTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRF 280 (948)
T ss_pred CCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcch
Confidence 3222 4566788999999999999999999999988743
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-32 Score=282.35 Aligned_cols=237 Identities=22% Similarity=0.319 Sum_probs=190.6
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCc---ccccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGD---LHQGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 534 (736)
++...|++.++||+||.+.||++...+.+.+|+|++.. ..+....|.+|+..|.+|+ |.+||+|++|-..++.+||
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 34566888899999999999999988888899988753 3345577999999999995 9999999999999999999
Q ss_pred EEecCCCCCHhhhcccCCC--CCHHHHHHHHHHHHHHhhhhhcCCC---------------ccEEcccCcccccCCCCCc
Q 041821 535 IYEYVEKQSLDKHLFSSYF--LGWKERFKVALGTAKGLAYLHHDEF---------------EPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~--l~~~~~~~i~~~i~~gL~yLH~~~~---------------~~kl~DFGla~~~~~~~~~ 597 (736)
||||= ..+|..+|++... .+| .++.+..|++.++.++|++++ .+||+|||+|..+..+...
T Consensus 438 vmE~G-d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTs 515 (677)
T KOG0596|consen 438 VMECG-DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTS 515 (677)
T ss_pred Eeecc-cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhcccCccccc
Confidence 99986 4799999987662 334 788899999999999998744 6899999999998887666
Q ss_pred ceeecccccCcccChhcccCCC-----------CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHH
Q 041821 598 SQFSQIRGTKGYMAPEWASNLP-----------ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR 666 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~-----------~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 666 (736)
......+||+.||+||.+.... .+.++||||+|||||+|+.|++||.. +.++...
T Consensus 516 I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~-----------~~n~~aK--- 581 (677)
T KOG0596|consen 516 IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ-----------IINQIAK--- 581 (677)
T ss_pred eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH-----------HHHHHHH---
Confidence 6666789999999999986322 56799999999999999999999862 2222221
Q ss_pred HHhhhccccccccccCccCCCCCHHH-HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 667 KILYEEEAWIEEIVDPRLKGKFNTNQ-AATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 667 ~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+..+.+|...-+++..- ...+++++..||+.||.+|||+.|+|++
T Consensus 582 ---------l~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 582 ---------LHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ---------HHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 44555664433332211 1229999999999999999999999976
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=284.66 Aligned_cols=224 Identities=24% Similarity=0.277 Sum_probs=175.6
Q ss_pred cccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|+||.||+|+.. +++.||||.++... ...+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999954 58899999996532 2344567788888754 899999999999999999999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
|+|..++.....+++.++..++.|+++||+|||+.+ ..+||+|||+++....... ......|
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g 158 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN--RASTFCG 158 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC--ceeccCC
Confidence 999999987778999999999999999999999763 3689999999875322211 2345679
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
|+.|+|||++.+..++.++|||||||++|||++|+.||..... ....... ... .+.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~---------~~~~~~~----~~~---------~~~-- 214 (316)
T cd05620 159 TPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE---------DELFESI----RVD---------TPH-- 214 (316)
T ss_pred CcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---------HHHHHHH----HhC---------CCC--
Confidence 9999999999999999999999999999999999999963211 1111111 000 011
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRPTMD-SVVQ 719 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 719 (736)
.+......+.+++.+||+.||++||++. ++++
T Consensus 215 --~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 215 --YPRWITKESKDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred --CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 1112345678899999999999999984 6654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-32 Score=273.40 Aligned_cols=244 Identities=24% Similarity=0.272 Sum_probs=178.8
Q ss_pred hhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC-----eEEEEEe
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR-----HRLLIYE 537 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e 537 (736)
|.-.+.+|+|+||.||+|.. ..++.||||+.-...... -+|+++|+++.|||||+++-+|.... ...+|||
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k---nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVle 102 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK---NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLE 102 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC---cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHH
Confidence 34457899999999999994 457999999985443322 26999999999999999998886532 2358999
Q ss_pred cCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcCC-----------------CccEEcccCcccccCCCCC
Q 041821 538 YVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHDE-----------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 538 ~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~~-----------------~~~kl~DFGla~~~~~~~~ 596 (736)
||| .+|.+.++. +..++...++-+..||.+||+|||+.+ +.+||+|||.|+.+..+..
T Consensus 103 ymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ep 181 (364)
T KOG0658|consen 103 YMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEP 181 (364)
T ss_pred hch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCC
Confidence 998 689888874 457888889999999999999999653 2679999999998877665
Q ss_pred cceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHH----HHHHhhh
Q 041821 597 SSQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV----KRKILYE 671 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 671 (736)
. .....|..|+|||.+.+. .|+.+.||||.|||+.||+-|++.|...... ..+..+.+.+ .+.+..-
T Consensus 182 n---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~-----dQL~eIik~lG~Pt~e~I~~m 253 (364)
T KOG0658|consen 182 N---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV-----DQLVEIIKVLGTPTREDIKSM 253 (364)
T ss_pred c---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH-----HHHHHHHHHhCCCCHHHHhhc
Confidence 3 456689999999998875 5999999999999999999999999854321 1122111111 0111110
Q ss_pred ccccccccccCccC-----CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 672 EEAWIEEIVDPRLK-----GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 672 ~~~~~~~~~d~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
... ..+...+.+. .-.......+.++++.++++++|.+|.++.|++.|
T Consensus 254 n~~-y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 254 NPN-YTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred Ccc-cccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 000 1111112221 11334456788999999999999999999999875
|
|
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-31 Score=272.77 Aligned_cols=230 Identities=29% Similarity=0.394 Sum_probs=185.5
Q ss_pred cccCeeceeEEEEeeeCC----CcEEEEEEeCccccc--HHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLAD----GRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|+||.||+|.... +..||+|.++..... .+.+.+|+++++.++|+||+++++++.+....++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999543 789999999765433 57789999999999999999999999999999999999999
Q ss_pred CCHhhhcccC---------CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC
Q 041821 542 QSLDKHLFSS---------YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 542 gsL~~~l~~~---------~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~ 596 (736)
++|.+++... ..+++.++..++.|+++||+|||+.+ ..+||+|||.+........
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 160 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY 160 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence 9999999875 67999999999999999999999763 3689999999987765432
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
........++..|+|||.+....++.++||||||+++|||++ |..||..... ..+.. ....+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---------~~~~~----~~~~~---- 223 (262)
T cd00192 161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN---------EEVLE----YLRKG---- 223 (262)
T ss_pred cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH---------HHHHH----HHHcC----
Confidence 222334567889999999988889999999999999999999 5888864311 11111 11100
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
.....+...+..+.+++.+||+.+|++|||+.+++++|+
T Consensus 224 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 224 --------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred --------CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 011122333568899999999999999999999999884
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=273.08 Aligned_cols=230 Identities=22% Similarity=0.277 Sum_probs=177.3
Q ss_pred ccCeeceeEEEEeeeC---CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCC
Q 041821 469 ELGRGGSGAVYKGVLA---DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQS 543 (736)
Q Consensus 469 ~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 543 (736)
.||+|+||.||+|.+. .+..||+|.+.... ...+.+.+|+.++++++||||+++++++.. +..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 4899999999999753 35579999986543 234668999999999999999999998864 57899999999999
Q ss_pred Hhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc-eeecccc
Q 041821 544 LDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS-QFSQIRG 605 (736)
Q Consensus 544 L~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~-~~~~~~g 605 (736)
|.+++.. ...+++..+..++.|+++||.|||+++ ..+||+|||+++......... ......+
T Consensus 81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 160 (257)
T cd05115 81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKW 160 (257)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCC
Confidence 9999875 347899999999999999999999763 368999999998654432211 1112234
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCcc
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRL 684 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 684 (736)
+..|+|||.+....++.++|||||||++|||++ |..||..... ... ...+..+ .
T Consensus 161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---------~~~----~~~~~~~------------~ 215 (257)
T cd05115 161 PLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG---------PEV----MSFIEQG------------K 215 (257)
T ss_pred CcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH---------HHH----HHHHHCC------------C
Confidence 578999999988889999999999999999996 9988863211 001 1111111 1
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 685 KGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 685 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
....+...+..+.+++.+||+.+|++||++.+|.+.|+.+
T Consensus 216 ~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 216 RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1122334456888999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=278.53 Aligned_cols=246 Identities=22% Similarity=0.294 Sum_probs=183.2
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-----------------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCcee
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-----------------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLV 520 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-----------------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv 520 (736)
...+|++.++||+|+||.||+++.. +...+|+|.+.... .....+.+|+.++++++|+||+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcc
Confidence 3456889999999999999998532 23469999997532 3346789999999999999999
Q ss_pred eEEEEEEeCCeEEEEEecCCCCCHhhhcccCC-----------CCCHHHHHHHHHHHHHHhhhhhcCCC-----------
Q 041821 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-----------FLGWKERFKVALGTAKGLAYLHHDEF----------- 578 (736)
Q Consensus 521 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------~l~~~~~~~i~~~i~~gL~yLH~~~~----------- 578 (736)
++++++..++..++||||+++++|.+++.... .+++.++..++.|++.||+|||+.++
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil 162 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL 162 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence 99999999999999999999999999986532 36788999999999999999997643
Q ss_pred -----ccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh--CCCCCCccccCCc
Q 041821 579 -----EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK--GIRLSNWVVEDGE 651 (736)
Q Consensus 579 -----~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t--g~~p~~~~~~~~~ 651 (736)
.+||+|||+++.+.............++..|+|||......++.++|||||||++|||++ |..||.....
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~--- 239 (296)
T cd05095 163 VGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD--- 239 (296)
T ss_pred EcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh---
Confidence 579999999986644322111222344678999999888889999999999999999998 5566643211
Q ss_pred cchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 652 GQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
.............. ...... ..+..++..+.+++.+||+.||++||++.+|++.|++
T Consensus 240 ------~~~~~~~~~~~~~~----~~~~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 ------EQVIENTGEFFRDQ----GRQVYL-----PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ------HHHHHHHHHHHhhc----cccccC-----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11111111100000 000000 1122234678899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=284.83 Aligned_cols=220 Identities=25% Similarity=0.271 Sum_probs=171.9
Q ss_pred cccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHH-HHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVS-TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|+||+||+|+.. +++.||||++.... .....+..|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999954 68999999996432 22234555554 56789999999999999999999999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
|+|..++.....+++..+..++.||++||.|||+.+ ..+||+|||+++....... ......|
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g 158 (323)
T cd05575 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK--TTSTFCG 158 (323)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC--ccccccC
Confidence 999999988778999999999999999999999763 3789999999875432221 2344679
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
|+.|+|||++.+..++.++|||||||++|||++|+.||.... ...... .+... ..
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~---------~~~~~~----~i~~~-----------~~- 213 (323)
T cd05575 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD---------TAEMYD----NILNK-----------PL- 213 (323)
T ss_pred ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC---------HHHHHH----HHHcC-----------CC-
Confidence 999999999999999999999999999999999999986321 011111 11110 00
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRPTMD 715 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 715 (736)
..+...+..+.+++.+||+.||++||++.
T Consensus 214 -~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 214 -RLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred -CCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 11112345788999999999999999984
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=277.80 Aligned_cols=229 Identities=24% Similarity=0.265 Sum_probs=175.5
Q ss_pred cCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 470 LGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 470 lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
||+|+||.||+++. .+++.+|+|.+.... .....+..|++++++++||||+++++++.++...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999995 458999999996422 2234456799999999999999999999999999999999999999
Q ss_pred hhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeeccccc
Q 041821 545 DKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGT 606 (736)
Q Consensus 545 ~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt 606 (736)
..++.... .+++..+..++.||+.||+|||+.+ ..+||+|||++........ .....|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~~ 157 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT---ITQRAGT 157 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce---eeccCCC
Confidence 98886433 5899999999999999999999763 3689999999986654321 2345689
Q ss_pred CcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCC
Q 041821 607 KGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKG 686 (736)
Q Consensus 607 ~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 686 (736)
..|+|||++.+..++.++|||||||++|||++|+.||........ . ......... ..+..
T Consensus 158 ~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~-----~----~~~~~~~~~-------~~~~~---- 217 (277)
T cd05607 158 NGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA-----K----EELKRRTLE-------DEVKF---- 217 (277)
T ss_pred CCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh-----H----HHHHHHhhc-------ccccc----
Confidence 999999999988899999999999999999999999864321110 0 011111000 00000
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 687 KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 687 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
........+.+++.+||+.||++||++.|+++.+.
T Consensus 218 -~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 218 -EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred -ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 01123456889999999999999999977665443
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-31 Score=282.22 Aligned_cols=232 Identities=19% Similarity=0.183 Sum_probs=178.8
Q ss_pred cccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|+||.||+++. .+++.||+|+++... ...+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999995 457899999997532 2335578899999888 699999999999999999999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
|+|..++.....+++..+..++.||++||+|||+.+ ..+||+|||+++....... ......|
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g 158 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD--TTSTFCG 158 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC--ceecccC
Confidence 999999887778999999999999999999999763 3789999999975332221 2345679
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
|+.|+|||++.+..++.++|||||||++|||++|+.||........... . ......... ..
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~--~----~~~~~~~~~-----------~~-- 219 (327)
T cd05617 159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNT--E----DYLFQVILE-----------KP-- 219 (327)
T ss_pred CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccccc--H----HHHHHHHHh-----------CC--
Confidence 9999999999999999999999999999999999999964332211100 0 001111100 00
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRPTM------DSVVQS 720 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 720 (736)
...+...+..+.+++.+||+.||++||++ .++++|
T Consensus 220 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 220 IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 01122234567889999999999999984 576654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=278.11 Aligned_cols=251 Identities=24% Similarity=0.301 Sum_probs=183.2
Q ss_pred hhhhcccccCeeceeEEEEeeeC-----CCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEe--CCeEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-----DGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE--GRHRL 533 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 533 (736)
..+.+.+.||+|+||.||++... ++..||+|.+.... ...+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 45678889999999999999742 47899999986543 345678899999999999999999998754 34678
Q ss_pred EEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC
Q 041821 534 LIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~ 596 (736)
+||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ..+||+|||+++.......
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 163 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKE 163 (284)
T ss_pred EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCc
Confidence 999999999999999754 36899999999999999999999764 3689999999987654332
Q ss_pred ccee-ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCc---cchhHHHHHHHHHHHHHhhhc
Q 041821 597 SSQF-SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGE---GQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 597 ~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 672 (736)
.... ....++..|+|||++.+..++.++|||||||++|||++|..++........ ............
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 234 (284)
T cd05081 164 YYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYH--------- 234 (284)
T ss_pred ceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHH---------
Confidence 1111 112234569999999988899999999999999999998776532211000 000000000000
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
+.+.+........+...+..+.+++.+||+.+|++|||+.+|++.|+.+
T Consensus 235 ---~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 235 ---LIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred ---HHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0011111111111223346788999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-31 Score=273.61 Aligned_cols=237 Identities=21% Similarity=0.226 Sum_probs=183.8
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
...|.+.+.||+|+||.||+|+. .+++.||+|.++... .....+.+|+.+++.++||||+++++.+...+..++||||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 45778889999999999999984 458899999986543 3335678899999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+++++|.+++.....+++.++..++.|++.||.|||+.+ ..+||+|||++........ ....
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~ 165 (267)
T cd06645 88 CGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA--KRKS 165 (267)
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccc--cccc
Confidence 999999999987778999999999999999999999763 3689999999876543221 1334
Q ss_pred ccccCcccChhccc---CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 603 IRGTKGYMAPEWAS---NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 603 ~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
..|+..|+|||++. ...++.++|||||||++|||++|..|+....... ...... ....
T Consensus 166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~--------~~~~~~-----------~~~~ 226 (267)
T cd06645 166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR--------ALFLMT-----------KSNF 226 (267)
T ss_pred ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh--------hHHhhh-----------ccCC
Confidence 57899999999974 4568899999999999999999999985322100 000000 0000
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+.... ....+..+.+++.+||+.+|++||++++|+++
T Consensus 227 ~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 227 QPPKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred CCCcccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 0111110 11123467889999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=275.57 Aligned_cols=231 Identities=28% Similarity=0.374 Sum_probs=179.3
Q ss_pred cccCeeceeEEEEeeeCC-------CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 468 EELGRGGSGAVYKGVLAD-------GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+.||+|+||.||+|+..+ +..+|||.+.... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 369999999999998543 2579999886533 3456788999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccC-------CCCCHHHHHHHHHHHHHHhhhhhcCCC---------------------ccEEcccCcccc
Q 041821 539 VEKQSLDKHLFSS-------YFLGWKERFKVALGTAKGLAYLHHDEF---------------------EPKIADFGLAKL 590 (736)
Q Consensus 539 ~~~gsL~~~l~~~-------~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------------~~kl~DFGla~~ 590 (736)
+++++|.+++... ..+++.++..++.|++.||.|||+.++ .+||+|||+++.
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 9999999998642 247899999999999999999997632 589999999986
Q ss_pred cCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 591 SQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
..............++..|+|||.+.+..++.++|||||||++|||++ |..||..... . ...... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~------~---~~~~~~----~ 227 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN------Q---EVLQHV----T 227 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH------H---HHHHHH----h
Confidence 644332222223345788999999999899999999999999999998 8888863210 0 011100 0
Q ss_pred hhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 670 YEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 670 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
. ......+...+..+.+++.+||+.+|++||++.+|++.|++
T Consensus 228 ~------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 228 A------------GGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred c------------CCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0 00111223345678899999999999999999999999864
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-31 Score=277.53 Aligned_cols=246 Identities=24% Similarity=0.309 Sum_probs=176.8
Q ss_pred hhhcccccCeeceeEEEEeee-C-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcC---CCCceeeEEEEEEe-----C
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-A-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKI---YHMNLVRMWGFCSE-----G 529 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~ 529 (736)
+|++.+.||+|+||.||+|+. . .++.||||+++... .....+.+|+.+++.+ +||||+++++++.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 577889999999999999985 3 36889999986432 2234566787777665 69999999999863 4
Q ss_pred CeEEEEEecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCccccc
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLS 591 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~ 591 (736)
...++||||++ ++|.+++... ..+++..+..++.||+.||.|||+.+ ..+||+|||+++..
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY 160 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence 56899999997 6899888653 35899999999999999999999763 36899999999866
Q ss_pred CCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 592 QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
.... ......||+.|+|||++.+..++.++|||||||++|||++|++||..... ...+..+..... ...
T Consensus 161 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~-----~~~~~~i~~~~~---~~~ 229 (290)
T cd07862 161 SFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-----VDQLGKILDVIG---LPG 229 (290)
T ss_pred cCCc---ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCH-----HHHHHHHHHHhC---CCC
Confidence 4432 23445689999999999988999999999999999999999999874321 111111111100 000
Q ss_pred ccccc------cccccCccCC---CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 672 EEAWI------EEIVDPRLKG---KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 672 ~~~~~------~~~~d~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+. .....+.... ...+.....+.+++.+||+.||++|||+.|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 230 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 00000 0001100000 0111234567899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=281.08 Aligned_cols=241 Identities=22% Similarity=0.301 Sum_probs=183.9
Q ss_pred hhhhcccccCeeceeEEEEeeeCC-C--cEEEEEEeCcc--cccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLAD-G--RAVAVKRLGDL--HQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~-~--~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 535 (736)
+.|.+.+.||+|+||.||+|...+ + ..+++|.++.. ....+.+.+|+.++.++ +||||+++++++......++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 357788899999999999998644 3 35788888642 23446788999999999 799999999999999999999
Q ss_pred EecCCCCCHhhhcccCC----------------CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEc
Q 041821 536 YEYVEKQSLDKHLFSSY----------------FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIA 583 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~ 583 (736)
|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ..+||+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~ 161 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIA 161 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEEC
Confidence 99999999999986432 4788999999999999999999763 368999
Q ss_pred ccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHH
Q 041821 584 DFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVR 662 (736)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 662 (736)
|||++........ ......+..|+|||++....++.++|||||||++|||++ |..||..... .....
T Consensus 162 dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~---------~~~~~ 229 (297)
T cd05089 162 DFGLSRGEEVYVK---KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC---------AELYE 229 (297)
T ss_pred CcCCCccccceec---cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---------HHHHH
Confidence 9999864322111 111223567999999998889999999999999999997 9899863211 11111
Q ss_pred HHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccccc
Q 041821 663 EVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEI 730 (736)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 730 (736)
.... ......+...+..+.+++.+||+.+|.+||++++|+++|+++.+....
T Consensus 230 ----~~~~------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 230 ----KLPQ------------GYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred ----HHhc------------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 1100 011111223345788999999999999999999999999988765443
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=285.08 Aligned_cols=244 Identities=26% Similarity=0.306 Sum_probs=187.6
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC--------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA--------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFC 526 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 526 (736)
++...+|.+.+.||+|+||.||+++.. ....||+|.++... ...+.+.+|+++++++ +||||+++++++
T Consensus 8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (334)
T cd05100 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC 87 (334)
T ss_pred ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence 455667899999999999999999732 12368999887532 3346788999999999 799999999999
Q ss_pred EeCCeEEEEEecCCCCCHhhhcccC----------------CCCCHHHHHHHHHHHHHHhhhhhcCC-------------
Q 041821 527 SEGRHRLLIYEYVEKQSLDKHLFSS----------------YFLGWKERFKVALGTAKGLAYLHHDE------------- 577 (736)
Q Consensus 527 ~~~~~~~lv~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~i~~gL~yLH~~~------------- 577 (736)
.+.+..+++|||+++|+|.+++... ..+++.++..++.|+++||.|||+.+
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill 167 (334)
T cd05100 88 TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV 167 (334)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE
Confidence 9999999999999999999998642 24788999999999999999999763
Q ss_pred ---CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccc
Q 041821 578 ---FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQ 653 (736)
Q Consensus 578 ---~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~ 653 (736)
..+||+|||+++...............++..|||||++.+..++.++||||||+++|||++ |..||....
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------ 241 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------ 241 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC------
Confidence 3689999999986654322221222334578999999999899999999999999999998 777775321
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 654 EAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
...+... +... .....+...+..+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus 242 ---~~~~~~~----~~~~------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 242 ---VEELFKL----LKEG------------HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred ---HHHHHHH----HHcC------------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 0111111 1100 0111122334578899999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-31 Score=270.92 Aligned_cols=239 Identities=19% Similarity=0.277 Sum_probs=188.7
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|.+.+.||+|+||.||+|... +++.||+|.++.. ....+.+.+|++++++++|+||+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 35788899999999999999965 7899999988632 123567889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC
Q 041821 537 EYVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 537 e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~ 596 (736)
||+++++|.+++.. ...+++..+..++.|+++||.|||+.+ ..++|+|||+++.......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 99999999998853 235899999999999999999999753 3689999999886544322
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
. .....++..|+|||.+.+..++.++|||||||++|||++|+.||..... ......... ..
T Consensus 162 ~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~----~~------ 222 (267)
T cd08224 162 A--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-------NLYSLCKKI----EK------ 222 (267)
T ss_pred c--cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc-------cHHHHHhhh----hc------
Confidence 1 2334688999999999988899999999999999999999999853211 011111110 00
Q ss_pred cccccCccCCCCC-HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 677 EEIVDPRLKGKFN-TNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 677 ~~~~d~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
......+ ......+.+++.+||+.+|++|||+.+|+++|+.+.
T Consensus 223 ------~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 223 ------CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ------CCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 0011112 234567889999999999999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-31 Score=274.52 Aligned_cols=239 Identities=24% Similarity=0.346 Sum_probs=185.5
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-C---CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-D---GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~---~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
..+|++.+.||+|+||.||+|+.. + +..+|+|.++... ...+.+.+|+.++++++||||+++++++.+++..++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 456788899999999999999853 2 3479999986532 334678999999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 535 IYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
||||+++++|.+++... ..+++.++..++.|++.||.|||+.+ ..+||+|||+++........
T Consensus 83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd05066 83 VTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 162 (267)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccce
Confidence 99999999999999764 36899999999999999999999763 36899999999876543321
Q ss_pred c-eeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 598 S-QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 598 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
. ......++..|+|||.+.+..++.++||||||+++||+++ |..||..... ....... ...
T Consensus 163 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~---------~~~~~~~----~~~---- 225 (267)
T cd05066 163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN---------QDVIKAI----EEG---- 225 (267)
T ss_pred eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH---------HHHHHHH----hCC----
Confidence 1 1122233568999999998889999999999999999886 9988863211 0111111 000
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
. ....+...+..+.+++.+|++.+|++||++.+|++.|+++
T Consensus 226 ----~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 226 ----Y----RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ----C----cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0 0111222345788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=283.39 Aligned_cols=224 Identities=22% Similarity=0.227 Sum_probs=176.4
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEEEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 536 (736)
++++.+.||+|+||.||+++. .+++.||||++.+.. ...+.+..|..++..+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 357788999999999999995 458899999996532 23355778999998885 577888999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
||+++|+|.+++.....+++.++..++.||+.||.|||+.+ ..+||+|||+++....... ..
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~--~~ 158 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV--TT 158 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCc--cc
Confidence 99999999999988778999999999999999999999763 3689999999975433221 13
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+ ...
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---------~~~~~~i----~~~--------- 216 (323)
T cd05615 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE---------DELFQSI----MEH--------- 216 (323)
T ss_pred cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH---------HHHHHHH----HhC---------
Confidence 345699999999999998999999999999999999999999864321 0111111 110
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM 714 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 714 (736)
. ...+......+.+++.+||+.+|.+|++.
T Consensus 217 --~--~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 217 --N--VSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred --C--CCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 0 01122234577889999999999999974
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-31 Score=274.10 Aligned_cols=234 Identities=24% Similarity=0.304 Sum_probs=172.7
Q ss_pred cccCeeceeEEEEeeeCC---CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCC
Q 041821 468 EELGRGGSGAVYKGVLAD---GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 542 (736)
+.||+|+||.||+|...+ +..+|+|.++... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 369999999999998543 4579999986543 33456889999999999999999999999999999999999999
Q ss_pred CHhhhcccCC-----CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 543 SLDKHLFSSY-----FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 543 sL~~~l~~~~-----~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+|.+++.... ..++..+..++.|+++||+|||+.+ ..+||+|||+++............
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~ 160 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPD 160 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCC
Confidence 9999986422 4577888899999999999999763 368999999997554332222222
Q ss_pred cccccCcccChhcccCC-------CCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 602 QIRGTKGYMAPEWASNL-------PITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-------~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
...++..|+|||++... .++.++||||||+++|||++ |+.||..... ...... . ....
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~------~~~~~~--~----~~~~-- 226 (269)
T cd05087 161 QLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD------EQVLTY--T----VREQ-- 226 (269)
T ss_pred CcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh------HHHHHH--H----hhcc--
Confidence 34578899999998642 35789999999999999996 9989863211 000000 0 0000
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
.....++.+.. .....+.+++.+|+ .+|++|||++||+..|+
T Consensus 227 --~~~~~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 227 --QLKLPKPRLKL----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred --cCCCCCCccCC----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11112222211 22345778889999 58999999999999885
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-31 Score=273.64 Aligned_cols=234 Identities=25% Similarity=0.312 Sum_probs=183.1
Q ss_pred hhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc-------ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 464 KSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH-------QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
|...+.||+|+||.||+|...+++.+|||.++... .....+.+|+.++++++|+||+++++++.+.+..++|+
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 56678899999999999998788999999886422 12245788999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC----
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN---- 596 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~---- 596 (736)
||+++++|.+++.+...+++..+..++.|++.||+|||+.+ ..+||+|||++........
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 161 (265)
T cd06631 82 EFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTH 161 (265)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccc
Confidence 99999999999987778899999999999999999999753 3689999999976532111
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
........|+..|+|||.+.+..++.++||||||+++|||++|..||..... ...... . .. .
T Consensus 162 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--------~~~~~~-~----~~-----~ 223 (265)
T cd06631 162 SNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR--------LAAMFY-I----GA-----H 223 (265)
T ss_pred cccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh--------HHHHHH-h----hh-----c
Confidence 1112345689999999999988899999999999999999999999863211 000000 0 00 0
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ...+ ..+......+.+++.+||+.+|++||++.+++++
T Consensus 224 ~-~~~~----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 224 R-GLMP----RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred c-CCCC----CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 0011 1122334678899999999999999999999864
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-31 Score=264.59 Aligned_cols=253 Identities=24% Similarity=0.256 Sum_probs=189.2
Q ss_pred HhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcccc---cHHHHHHHHHHHhcCCCCc-eeeEEEEEEeCC-----
Q 041821 461 KSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQ---GEEVFWAEVSTIGKIYHMN-LVRMWGFCSEGR----- 530 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~----- 530 (736)
...|...++||+|+||+||+|+ ..+|+.||+|++..... ......+|+.+|++++|+| ||++++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 4566777889999999999999 55689999999975433 2245689999999999999 999999998877
Q ss_pred -eEEEEEecCCCCCHhhhcccCC----CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCccc
Q 041821 531 -HRLLIYEYVEKQSLDKHLFSSY----FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAK 589 (736)
Q Consensus 531 -~~~lv~e~~~~gsL~~~l~~~~----~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~ 589 (736)
..++|+||+. .+|..++.... .++...++.++.||++||+|||+++ ..+||+|||+|+
T Consensus 90 ~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 90 GKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLAR 168 (323)
T ss_pred ceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHH
Confidence 7899999995 79999987654 4777899999999999999999763 378999999999
Q ss_pred ccCCCCCcceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHH
Q 041821 590 LSQRGSNSSQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKI 668 (736)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (736)
...-... ..+..++|..|+|||++.+. .|+...||||+|||+.||+++++.|....+ ...+..+.+...
T Consensus 169 a~~ip~~--~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-----~~ql~~If~~lG--- 238 (323)
T KOG0594|consen 169 AFSIPMR--TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-----IDQLFRIFRLLG--- 238 (323)
T ss_pred HhcCCcc--cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-----HHHHHHHHHHcC---
Confidence 6653322 26678899999999999876 699999999999999999999999886543 122222222111
Q ss_pred hhhccccccccccCccCCC---------CCH---HHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hhcc
Q 041821 669 LYEEEAWIEEIVDPRLKGK---------FNT---NQAATLIGIGISCVDEDRSKRPTMDSVVQS--LLEC 724 (736)
Q Consensus 669 ~~~~~~~~~~~~d~~~~~~---------~~~---~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~ 724 (736)
......|-....-+..... ... .......+++.+||+.+|.+|.|+..++.| +...
T Consensus 239 tP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 239 TPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred CCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 1111111111111111100 001 111478899999999999999999999987 5544
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-31 Score=286.81 Aligned_cols=248 Identities=20% Similarity=0.232 Sum_probs=181.6
Q ss_pred hhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC-----eEEE
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR-----HRLL 534 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~l 534 (736)
+++.+.||+|+||.||+++. .+++.||||++.... ...+.+.+|+.+++.++||||+++++++...+ ..++
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence 46778999999999999995 468999999986532 23456889999999999999999999998776 7899
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
||||+. ++|.+.+.....+++..+..++.||+.||.|||+.+ ..+||+|||+++........
T Consensus 82 v~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~- 159 (372)
T cd07853 82 VTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK- 159 (372)
T ss_pred Eeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc-
Confidence 999997 688888877778999999999999999999999763 37899999999865443221
Q ss_pred eeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCc----------cchhHHHHHHHHHHHH
Q 041821 599 QFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGE----------GQEAELKRFVREVKRK 667 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~----------~~~~~~~~~~~~~~~~ 667 (736)
......+++.|+|||++.+. .++.++|||||||++|||++|+.||........ ................
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 239 (372)
T cd07853 160 HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAH 239 (372)
T ss_pred cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHH
Confidence 23345689999999998874 479999999999999999999999974321100 0000000000000000
Q ss_pred HhhhccccccccccCc-cC--CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 668 ILYEEEAWIEEIVDPR-LK--GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 668 ~~~~~~~~~~~~~d~~-~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+.. ....+. .. ..........+.+|+.+||+.||++|||+.|++++
T Consensus 240 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 240 ILR-------GPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHh-------CCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000 000000 00 00111224578899999999999999999999986
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-31 Score=273.96 Aligned_cols=234 Identities=21% Similarity=0.255 Sum_probs=180.8
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
.+++.+.||+|+||.||+|+. .+++.||+|.+... ....+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 456788999999999999984 56889999998643 233467889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecc
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
++++|..+. .+++..+..++.|++.||.|||+.+ ..+||+|||++....... ....
T Consensus 82 ~~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~----~~~~ 153 (279)
T cd06619 82 DGGSLDVYR----KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI----AKTY 153 (279)
T ss_pred CCCChHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc----ccCC
Confidence 999997653 4788899999999999999999763 368999999998654322 2345
Q ss_pred cccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
.||..|+|||++.+..++.++||||||+++|||++|+.||.......... ........... ...+.
T Consensus 154 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~------~~~~~~~~~~~--------~~~~~ 219 (279)
T cd06619 154 VGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL------MPLQLLQCIVD--------EDPPV 219 (279)
T ss_pred CCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc------chHHHHHHHhc--------cCCCC
Confidence 78999999999998889999999999999999999999986432211100 00000010000 00111
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
+ ........+.+++.+||+.+|++||+++|++++-
T Consensus 220 ~---~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~ 254 (279)
T cd06619 220 L---PVGQFSEKFVHFITQCMRKQPKERPAPENLMDHP 254 (279)
T ss_pred C---CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCc
Confidence 1 1112345688999999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-31 Score=274.81 Aligned_cols=242 Identities=24% Similarity=0.307 Sum_probs=187.1
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCC----CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
+...++.+.+.||+|+||.||+|...+ ...||||...... ...+.+.+|+.++++++||||+++++++.+ ...
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPV 81 (270)
T ss_pred echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCc
Confidence 445668888999999999999998533 3478999886543 345678999999999999999999999876 457
Q ss_pred EEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ..+||+|||+++......
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 89999999999999997644 6899999999999999999999764 368999999998765432
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
... .....++..|+|||.+....++.++||||||+++|||++ |..||...... ..... +..+.
T Consensus 162 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---------~~~~~----~~~~~-- 225 (270)
T cd05056 162 YYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN---------DVIGR----IENGE-- 225 (270)
T ss_pred cee-cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH---------HHHHH----HHcCC--
Confidence 211 122334568999999988889999999999999999986 99998643211 00111 11100
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
.. ..+...+..+.+++.+|+..+|++|||+.++++.|+++..+
T Consensus 226 ------~~----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 226 ------RL----PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ------cC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00 11223345788899999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-31 Score=267.04 Aligned_cols=248 Identities=23% Similarity=0.307 Sum_probs=183.6
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHh--cCCCCceeeEEEEEEeCC----eEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIG--KIYHMNLVRMWGFCSEGR----HRL 533 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~--~l~h~niv~l~~~~~~~~----~~~ 533 (736)
.+.+..+.+.||+|.||+||+|++ .|+.||||++... .++.+.+|.+|.+ .|+|+||+.+++.-..++ +++
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr--dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR--DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred hhheeEEEEEecCccccceeeccc-cCCceEEEEeccc--chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 345667889999999999999999 5899999999543 3445556666655 569999999998765443 579
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC------------------------CCccEEcccCccc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD------------------------EFEPKIADFGLAK 589 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~------------------------~~~~kl~DFGla~ 589 (736)
||++|.++|||.++|.+ ..++....++++..+|.||+|||-+ +....|+|+|||.
T Consensus 286 LvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv 364 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 364 (513)
T ss_pred EeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence 99999999999999987 5699999999999999999999932 3467899999997
Q ss_pred ccCCCCCc--ceeecccccCcccChhcccCCC----Cc--cccceechhHHHHHHHhC----------CCCCCccccCCc
Q 041821 590 LSQRGSNS--SQFSQIRGTKGYMAPEWASNLP----IT--AKVDVYSYGVVILEMVKG----------IRLSNWVVEDGE 651 (736)
Q Consensus 590 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~----~~--~~~DvwS~Gvvl~el~tg----------~~p~~~~~~~~~ 651 (736)
........ ......+||.+|||||++.... |. ..+||||||.|+||++.+ +.||....+.+.
T Consensus 365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP 444 (513)
T KOG2052|consen 365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP 444 (513)
T ss_pred EecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC
Confidence 66544221 2345578999999999997532 22 369999999999999864 356654443332
Q ss_pred cchhHHHHHHHHHHHHHhhhccccccccccCccCCC-CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 652 GQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGK-FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
. .+++... + ..+-+.|.+... .+.+....+.+||..||..+|..|-|+-.|.+.|.++.+
T Consensus 445 s-~eeMrkV-------V-------Cv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 445 S-FEEMRKV-------V-------CVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred C-HHHHhcc-------e-------eecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 1 1111000 0 112223333222 234566789999999999999999999999999988764
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=285.67 Aligned_cols=184 Identities=24% Similarity=0.273 Sum_probs=161.7
Q ss_pred HHHhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcccccHHHHHHHHHHHhcCC-C-----CceeeEEEEEEeCCe
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-H-----MNLVRMWGFCSEGRH 531 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~ 531 (736)
...-+|.+.+.||+|.||.|.+|. ..+++.||||+++....-..+-..|+.+|..|+ | -|+|+++++|...++
T Consensus 183 ~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 183 HIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred eeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 333488999999999999999999 556999999999887776677788999999997 4 489999999999999
Q ss_pred EEEEEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCCC------------------ccEEcccCccccc
Q 041821 532 RLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDEF------------------EPKIADFGLAKLS 591 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~~------------------~~kl~DFGla~~~ 591 (736)
.|||+|.+. .+|.++|+.+. .++...++.|+.||+.||.+||+.++ .+||+|||.|...
T Consensus 263 lciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 263 LCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 999999995 89999998765 78999999999999999999997643 7899999999876
Q ss_pred CCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCcccc
Q 041821 592 QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVE 648 (736)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~ 648 (736)
... ....+.++.|+|||++.+.+|+.+.||||||||+.||++|.+.|....+
T Consensus 342 ~q~-----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne 393 (586)
T KOG0667|consen 342 SQR-----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNE 393 (586)
T ss_pred CCc-----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCH
Confidence 543 2366789999999999999999999999999999999999988875543
|
|
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-31 Score=270.70 Aligned_cols=233 Identities=25% Similarity=0.335 Sum_probs=182.6
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEE-eCCeEEEEEec
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCS-EGRHRLLIYEY 538 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~ 538 (736)
...++.+.+.||+|+||.||++... +..||+|.++... ..+.+.+|+.++++++|+||+++++++. .+...+++|||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 4 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred cHHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 3457788899999999999999864 7889999986533 3457889999999999999999999764 45678999999
Q ss_pred CCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 539 VEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 539 ~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
+++++|.+++.... .+++..+..++.|++.||+|||+.+ ..+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----- 156 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----- 156 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC-----
Confidence 99999999987643 4889999999999999999999763 368999999987654322
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....++..|+|||++.+..++.++|||||||++|||++ |+.||.... ......... .+
T Consensus 157 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~---------~~~~~~~~~----~~-------- 215 (256)
T cd05082 157 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP---------LKDVVPRVE----KG-------- 215 (256)
T ss_pred CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC---------HHHHHHHHh----cC--------
Confidence 12234678999999988889999999999999999998 888875221 111111111 00
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.....+...+..+.+++.+||+.+|++|||+.+++++|+++
T Consensus 216 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 216 ----YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ----CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 01111223356788999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=293.05 Aligned_cols=236 Identities=21% Similarity=0.219 Sum_probs=189.3
Q ss_pred hhhcccccCeeceeEEEEeeeCCC-cEEEEEEeCc-ccccHHHHHHHHHHHhcCC-CCceeeEEEE-EEe------CCeE
Q 041821 463 TKSFKEELGRGGSGAVYKGVLADG-RAVAVKRLGD-LHQGEEVFWAEVSTIGKIY-HMNLVRMWGF-CSE------GRHR 532 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~------~~~~ 532 (736)
+.++.+.|.+|||+.||+|....+ ..+|+|++-. .....+...+||.+|++|+ |+|||.+++. ... .-+.
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 456778999999999999997665 9999999854 4455677899999999997 9999999993 221 2367
Q ss_pred EEEEecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcC------------------CCccEEcccCcccccC
Q 041821 533 LLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHD------------------EFEPKIADFGLAKLSQ 592 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~------------------~~~~kl~DFGla~~~~ 592 (736)
+|.||||.+|.|-+++..+ ..|++.++++|+.|+++|+++||.. +.+.||||||.|....
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~ 197 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKI 197 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccccccc
Confidence 8999999999999999743 3699999999999999999999943 3467999999996443
Q ss_pred CCCCcce-------eecccccCcccChhcc---cCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHH
Q 041821 593 RGSNSSQ-------FSQIRGTKGYMAPEWA---SNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR 662 (736)
Q Consensus 593 ~~~~~~~-------~~~~~gt~~y~aPE~~---~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 662 (736)
....... .-...-|+-|+|||++ .+.++++|+|||+|||+||-|+....||+..-
T Consensus 198 ~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg--------------- 262 (738)
T KOG1989|consen 198 LSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG--------------- 262 (738)
T ss_pred CCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc---------------
Confidence 3221110 0112358999999987 47789999999999999999999999997321
Q ss_pred HHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 663 EVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
-..+++..+.-...+....++.+||..||+.||.+||++-+|+..+..+..
T Consensus 263 -------------~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 263 -------------KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred -------------ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 234555555545556788999999999999999999999999999887754
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=275.43 Aligned_cols=233 Identities=21% Similarity=0.280 Sum_probs=184.7
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
.+|.+.+.||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|+.+++.++||||+++++.+..+...++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 4677888999999999999984 468899999986543 34466889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecc
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
++++|.+++... .+++.++..++.|++.||+|||+.+ ..+||+|||++......... ....
T Consensus 100 ~~~~L~~~~~~~-~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~ 176 (296)
T cd06654 100 AGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTM 176 (296)
T ss_pred CCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccc--cCcc
Confidence 999999998643 5899999999999999999999764 36899999998865433221 2334
Q ss_pred cccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
.|++.|+|||.+.+..++.++|||||||++|||++|+.||...... ..+.... ....
T Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~--------~~~~~~~---------------~~~~ 233 (296)
T cd06654 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--------RALYLIA---------------TNGT 233 (296)
T ss_pred cCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH--------HhHHHHh---------------cCCC
Confidence 6889999999999888999999999999999999999998632210 0000000 0000
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.....+......+.+++.+||+.||++|||+.+|+++
T Consensus 234 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 234 PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 0011122344678899999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-31 Score=274.86 Aligned_cols=231 Identities=23% Similarity=0.283 Sum_probs=183.1
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+.|...+.||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 4566778899999999999985 457899999986432 3345788999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+++++|.+++.. ..+++..+..++.|+++||.|||+++ ..+||+|||++..+..... ....
T Consensus 84 ~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~~ 160 (277)
T cd06642 84 LGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--KRNT 160 (277)
T ss_pred cCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcch--hhhc
Confidence 999999998864 46899999999999999999999763 3689999999986654321 1223
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
..|+..|+|||++.+..++.++|||||||++|||++|+.|+....... ... . +.....+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---------~~~----~--------~~~~~~~ 219 (277)
T cd06642 161 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR---------VLF----L--------IPKNSPP 219 (277)
T ss_pred ccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh---------HHh----h--------hhcCCCC
Confidence 457889999999998889999999999999999999999976321100 000 0 0000111
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......+..+.+++.+||+.+|++||++.+|+++
T Consensus 220 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 220 ----TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ----CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 1222345678899999999999999999999986
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-31 Score=270.93 Aligned_cols=230 Identities=22% Similarity=0.305 Sum_probs=179.8
Q ss_pred cccCeeceeEEEEeeeCC--C--cEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLAD--G--RAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~--~--~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|++|.||+|.+.+ + ..||||.+.... ...+.+.+|+.++++++||||+++++.+.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998543 2 369999997643 345678999999999999999999999988 889999999999
Q ss_pred CCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc-eeec
Q 041821 542 QSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS-QFSQ 602 (736)
Q Consensus 542 gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~-~~~~ 602 (736)
++|.+++.... .+++..+..++.|++.||+|||+.+ ..+||+|||+++.+....... ....
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 159 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH 159 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence 99999997654 6899999999999999999999764 368999999998765432211 1123
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
..++..|+|||.+....++.++|||||||++|||++ |..||..... ......... . ...
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---------~~~~~~~~~---~-----~~~--- 219 (257)
T cd05040 160 LKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG---------SQILKKIDK---E-----GER--- 219 (257)
T ss_pred CCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH---------HHHHHHHHh---c-----CCc---
Confidence 457789999999998889999999999999999998 9999853211 011111110 0 000
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
...+...+..+.+++.+||+.+|++||++.+|++.|.
T Consensus 220 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 220 ----LERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ----CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0111223467889999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-31 Score=275.71 Aligned_cols=252 Identities=23% Similarity=0.257 Sum_probs=185.6
Q ss_pred HhhhhcccccCeeceeEEEEeee-----CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC--Ce
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-----ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG--RH 531 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 531 (736)
...|.+.++||+|+||.||+++. .++..||+|.++... ...+.+.+|++++++++||||+++++++.+. ..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 3 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 34567788999999999999973 347889999986532 3345789999999999999999999999875 56
Q ss_pred EEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRG 594 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~ 594 (736)
.++||||+++++|.+++.+.. .+++..+..++.|++.||+|||+++ ..+||+|||+++.+...
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 162 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence 899999999999999986543 6899999999999999999999763 36899999999876543
Q ss_pred CCcc-eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccc--hhHHHHHHHHHHHHHhhh
Q 041821 595 SNSS-QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQ--EAELKRFVREVKRKILYE 671 (736)
Q Consensus 595 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 671 (736)
.... ......++..|+|||++.+..++.++||||||+++|||++++.|........... .................
T Consensus 163 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 241 (284)
T cd05079 163 KEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEE- 241 (284)
T ss_pred ccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHc-
Confidence 3211 1223456778999999988889999999999999999999877653211100000 00000000000000000
Q ss_pred ccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 672 EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 672 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
......+...+..+.+++.+||+.||++|||+.++++.|+++
T Consensus 242 -----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 242 -----------GKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred -----------CccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 001111223456899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.2e-31 Score=269.70 Aligned_cols=233 Identities=23% Similarity=0.301 Sum_probs=186.4
Q ss_pred hhhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 462 STKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
+.|++.+.||+|+||.||+|+..+ ++.+|+|.+..... .+.+.+|++++++++||||+++++++.+....++++||++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 467888999999999999999655 78999999975443 6789999999999999999999999999999999999999
Q ss_pred CCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecc
Q 041821 541 KQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 541 ~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
+++|.+++.. ...+++..+..++.|++.||.|||+.+ ..+||+|||++........ .....
T Consensus 82 ~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~ 159 (256)
T cd06612 82 AGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA--KRNTV 159 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc--ccccc
Confidence 9999999865 347899999999999999999999753 3689999999987654332 12334
Q ss_pred cccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
.|+..|+|||++.+..++.++||||||+++|||++|+.||........ . . . ......+.
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~--------~-~----~--------~~~~~~~~ 218 (256)
T cd06612 160 IGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA--------I-F----M--------IPNKPPPT 218 (256)
T ss_pred cCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh--------h-h----h--------hccCCCCC
Confidence 588999999999988999999999999999999999999864321100 0 0 0 00000011
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+......+.+++.+||+.||++|||+.+|+++
T Consensus 219 --~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 219 --LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred --CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 11223344678999999999999999999999874
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=287.11 Aligned_cols=241 Identities=17% Similarity=0.169 Sum_probs=182.9
Q ss_pred HHHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe
Q 041821 457 AELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 457 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 531 (736)
.++....|++.+.||+|+||.||+++.. +++.+|+|.+.... ...+.+.+|+.+++.++||||+++++.+.+++.
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 3455678999999999999999999954 57899999986422 233457889999999999999999999999999
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.++||||+++|+|.+++... .++...+..++.||+.||.|||+.+ ..+||+|||+++......
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~ 196 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 196 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC
Confidence 99999999999999998654 5889999999999999999999763 368999999998765432
Q ss_pred CcceeecccccCcccChhcccCCC----CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLP----ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
.. ......||+.|||||++.... ++.++|||||||++|||++|+.||..... ...... +...
T Consensus 197 ~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~---------~~~~~~----i~~~ 262 (371)
T cd05622 197 MV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL---------VGTYSK----IMNH 262 (371)
T ss_pred cc-cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH---------HHHHHH----HHcC
Confidence 21 133567999999999987543 78999999999999999999999973211 111111 1100
Q ss_pred ccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHH
Q 041821 672 EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSK--RPTMDSVVQSL 721 (736)
Q Consensus 672 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L 721 (736)
. . .+...........+.+++.+|++.++.+ ||++.+|+++.
T Consensus 263 ~-----~----~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 263 K-----N----SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred C-----C----cccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 0 0 0000111223456788999999844433 78999999875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-31 Score=283.03 Aligned_cols=223 Identities=22% Similarity=0.235 Sum_probs=172.4
Q ss_pred cccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHH-HHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVS-TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|+||.||+++.. +++.||+|++.... .....+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999954 57889999996532 22234444544 56789999999999999999999999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
++|.+++.....+.+..+..++.||++||.|||+.+ ..+||+|||+++....... ......|
T Consensus 81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~--~~~~~~g 158 (325)
T cd05602 81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG--TTSTFCG 158 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC--CcccccC
Confidence 999999988778899999999999999999999763 3689999999975432221 2345679
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
|+.|||||++.+..++.++|||||||++|||++|+.||..... ........ .. ..
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------~~~~~~i~----~~-----------~~- 213 (325)
T cd05602 159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT---------AEMYDNIL----NK-----------PL- 213 (325)
T ss_pred CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH---------HHHHHHHH----hC-----------Cc-
Confidence 9999999999999999999999999999999999999963211 01111110 00 00
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVV 718 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 718 (736)
..++.....+.+++.+||+.||.+||++.+.+
T Consensus 214 -~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 214 -QLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred -CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 11122345688899999999999999887443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=276.49 Aligned_cols=233 Identities=23% Similarity=0.263 Sum_probs=180.7
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
+|+..+.||+|+||.||++.. .+++.||||.+.... .....+.+|+.++++++|+||+++++.+.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 356678899999999999995 458899999986432 223457789999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 538 YVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|+++++|.+++.... .+++..+..++.|++.||.|||+.+ ..++|+|||++........
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~--- 157 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--- 157 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc---
Confidence 999999999885433 5899999999999999999999763 3689999999976543322
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.....|+..|+|||++.+..++.++||||||+++|||++|+.||........ ......+... .
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~--~~~~~~~~~~------------~--- 220 (285)
T cd05630 158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REEVERLVKE------------V--- 220 (285)
T ss_pred ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch--HHHHHhhhhh------------h---
Confidence 2334689999999999998999999999999999999999999974321100 0000000000 0
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT-----MDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 720 (736)
.. ..+......+.+|+.+||+.||++||| +.|++++
T Consensus 221 -~~----~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 221 -QE----EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred -hh----hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 00 111223356789999999999999999 8898874
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-31 Score=277.79 Aligned_cols=249 Identities=19% Similarity=0.193 Sum_probs=184.4
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
.|++.+.||+|+||.||++.. .++..+|+|.++... .....+.+|++++++++||||+++++++.+++..++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 467888999999999999995 457889999886432 23456889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEcccCcccccCCCCCcceeec
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
++++|.+++.....+++..+..++.|+++||.|||+. +..+||+|||++....... ...
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~----~~~ 157 (308)
T cd06615 82 DGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----ANS 157 (308)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccc----ccc
Confidence 9999999998877899999999999999999999963 2368999999987653321 234
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhc----------
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE---------- 672 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 672 (736)
..|+..|+|||.+.+..++.++||||||+++|||++|+.||...... .................
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
T cd06615 158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK------ELEAMFGRPVSEGEAKESHRPVSGHPP 231 (308)
T ss_pred CCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh------hHHHhhcCccccccccCCcccccCCCC
Confidence 56899999999998888999999999999999999999998632210 00000000000000000
Q ss_pred --------cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 673 --------EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 673 --------~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
......+................+.+++.+||+.||++|||+.+|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred CccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0000000000000000111345688999999999999999999999884
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-31 Score=274.41 Aligned_cols=251 Identities=23% Similarity=0.262 Sum_probs=189.2
Q ss_pred hhhhcccccCeeceeEEEEeeeC-----CCcEEEEEEeCcccc--cHHHHHHHHHHHhcCCCCceeeEEEEEEe--CCeE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-----DGRAVAVKRLGDLHQ--GEEVFWAEVSTIGKIYHMNLVRMWGFCSE--GRHR 532 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 532 (736)
..+.+.+.||+|+||.||+++.. .+..+|||.++.... ..+.+.+|+++++.++||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45677889999999999999853 367899999976554 36779999999999999999999999987 5678
Q ss_pred EEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ..+||+|||++.......
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDK 163 (284)
T ss_pred EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCC
Confidence 99999999999999997654 6899999999999999999999763 368999999998776332
Q ss_pred Ccce-eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccch--hHHHHHHHHHHHHHhhhc
Q 041821 596 NSSQ-FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQE--AELKRFVREVKRKILYEE 672 (736)
Q Consensus 596 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 672 (736)
.... .....++..|+|||.+.+..++.++||||||++++||++|..|+........... ...........
T Consensus 164 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 236 (284)
T cd05038 164 DYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL------- 236 (284)
T ss_pred cceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH-------
Confidence 2111 1123355679999999888899999999999999999999988764321110000 00000001111
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
+.+........+...+..+.+++.+||+.+|++||||.||+++|+++
T Consensus 237 -----~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 237 -----ELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred -----HHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 11111111112233446789999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=285.62 Aligned_cols=256 Identities=17% Similarity=0.140 Sum_probs=187.2
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC---CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA---DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
.+...+|.+.+.||+|+||.||++... .+..||||.+.... ...+|+.+|++++||||+++++++......++
T Consensus 88 ~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~----~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 88 SVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK----TPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred hhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc----cHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 344567899999999999999999743 35789999886432 34589999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
|||++. ++|.+++.....+++.+++.++.||+.||.|||+.+ ..+||+|||+++.........
T Consensus 164 v~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~ 242 (392)
T PHA03207 164 VMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTP 242 (392)
T ss_pred EehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccc
Confidence 999996 789888876678999999999999999999999764 368999999998765543333
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhh---hc-cc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILY---EE-EA 674 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~ 674 (736)
......||+.|+|||++....++.++|||||||++|||++|+.||........ ...+..+.......... .. ..
T Consensus 243 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~--~~~l~~i~~~~~~~~~~~~~~~~~~ 320 (392)
T PHA03207 243 QCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSS--SSQLRSIIRCMQVHPLEFPQNGSTN 320 (392)
T ss_pred cccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCc--HHHHHHHHHHhccCccccCCccchh
Confidence 33456799999999999999999999999999999999999999975432211 11111111111000000 00 00
Q ss_pred c------ccccccCccCCC---CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 675 W------IEEIVDPRLKGK---FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 675 ~------~~~~~d~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ......+..... ........+.+++.+||+.||++|||+.|++.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 321 LCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 000000000000 001123567889999999999999999999987
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=269.97 Aligned_cols=232 Identities=22% Similarity=0.267 Sum_probs=186.5
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+.|+..+.||+|+||.||+|... .+..||+|.+... ......+.+|+.++++++||||+++++++.++...++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 45667788999999999999954 5889999998643 23456788999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+++++|.+++.. .++++.++..++.|++.||+|||+.++ .++|+|||++......... ...
T Consensus 84 ~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~ 160 (277)
T cd06640 84 LGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK--RNT 160 (277)
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccc--ccc
Confidence 999999999865 468999999999999999999997643 6899999999766543221 233
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
..++..|+|||++.+..++.++|||||||++|||++|..|+....... .. ..+..
T Consensus 161 ~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---------~~----------------~~~~~ 215 (277)
T cd06640 161 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR---------VL----------------FLIPK 215 (277)
T ss_pred ccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh---------Hh----------------hhhhc
Confidence 468889999999988889999999999999999999999986332100 00 00011
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
..........+..+.+++.+||+.+|++||++.+++++-
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06640 216 NNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHK 254 (277)
T ss_pred CCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhCh
Confidence 111223445667889999999999999999999998873
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=282.90 Aligned_cols=221 Identities=24% Similarity=0.262 Sum_probs=172.3
Q ss_pred cccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHH-HHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVS-TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|+||+||+++. .+++.+|||++.... .....+..|.. +++.++||||+++++.+..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999994 468999999996432 23344556655 56789999999999999999999999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
|+|..++.....+++..+..++.||++||.|||+.+ ..+||+|||+++....... ......|
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--~~~~~~g 158 (325)
T cd05604 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD--TTTTFCG 158 (325)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC--CcccccC
Confidence 999999988778999999999999999999999763 3689999999875432221 2345679
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
|+.|||||++.+..++.++|||||||++|||++|+.||..... ..... ..... .+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---------~~~~~----~~~~~-----------~~- 213 (325)
T cd05604 159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV---------AEMYD----NILHK-----------PL- 213 (325)
T ss_pred ChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH---------HHHHH----HHHcC-----------Cc-
Confidence 9999999999999999999999999999999999999863210 11111 11110 00
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRPTMDS 716 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 716 (736)
..++.....+.+++.+|++.+|++||++.+
T Consensus 214 -~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 214 -VLRPGASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred -cCCCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 011123456788999999999999998863
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-31 Score=273.32 Aligned_cols=238 Identities=23% Similarity=0.322 Sum_probs=184.6
Q ss_pred HhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCcccc--cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLHQ--GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
...+...+.||+|+||.||+|+.. +.+.||+|.+..... ..+.+.+|++++++++|+||+++++++.+....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH 83 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence 456778889999999999999953 246799999865433 346789999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCC---------CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCc
Q 041821 533 LLIYEYVEKQSLDKHLFSSY---------FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGL 587 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~---------~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGl 587 (736)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+.++ .+||+|||+
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~ 163 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSL 163 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccccc
Confidence 99999999999999997655 68999999999999999999997643 579999999
Q ss_pred ccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHH
Q 041821 588 AKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKR 666 (736)
Q Consensus 588 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 666 (736)
++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||..... ..+...
T Consensus 164 ~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~---------~~~~~~--- 230 (275)
T cd05046 164 SKDVYNSEY-YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD---------EEVLNR--- 230 (275)
T ss_pred ccccCcccc-cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch---------HHHHHH---
Confidence 875433221 12333456788999999988889999999999999999999 6777752210 011111
Q ss_pred HHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 667 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
...+. .. ...+...+..+.+++.+||+.+|++|||+.+++++|.+
T Consensus 231 -~~~~~---~~--------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 231 -LQAGK---LE--------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred -HHcCC---cC--------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 11110 00 01112234578899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=282.02 Aligned_cols=220 Identities=22% Similarity=0.249 Sum_probs=171.5
Q ss_pred cccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHH-HHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVS-TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|+||.||+|+.. +++.||+|++.+.. .....+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999954 58899999986432 22334555554 67889999999999999999999999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
++|...+.....+++..+..++.||++||.|||+.+ ..+||+|||+++....... ......|
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g 158 (321)
T cd05603 81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE--TTSTFCG 158 (321)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC--ccccccC
Confidence 999999887778999999999999999999999753 3789999999875422221 2344679
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
|+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+ . ...
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---------~~~~~~~i----~-----------~~~-- 212 (321)
T cd05603 159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD---------VSQMYDNI----L-----------HKP-- 212 (321)
T ss_pred CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC---------HHHHHHHH----h-----------cCC--
Confidence 999999999998899999999999999999999999996321 11111111 0 000
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRPTMD 715 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 715 (736)
...+......+.+++.+||+.||.+||++.
T Consensus 213 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 213 LQLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 111223345788999999999999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-31 Score=269.87 Aligned_cols=230 Identities=17% Similarity=0.204 Sum_probs=182.3
Q ss_pred hhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
|++.++||+|+||.||++.. .+++.+|+|.++.. ....+.+.+|+.+++.++|+||+++++.+.+++..+++|||++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD 81 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence 56788999999999999994 45889999998542 2344678899999999999999999999999999999999999
Q ss_pred CCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 541 KQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 541 ~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+++|.+++... ..++...+..++.|++.||.|||+.+ ..++|+|||++......... ...
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~--~~~ 159 (255)
T cd08219 82 GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY--ACT 159 (255)
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccc--ccc
Confidence 99999988643 35889999999999999999999763 36899999999766443221 234
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
..|++.|+|||++.+..++.++||||||+++|+|++|..||.... ....... ...+. .
T Consensus 160 ~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~---------~~~~~~~----~~~~~---~------ 217 (255)
T cd08219 160 YVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS---------WKNLILK----VCQGS---Y------ 217 (255)
T ss_pred ccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC---------HHHHHHH----HhcCC---C------
Confidence 568999999999998889999999999999999999999986321 0111111 11110 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+......+.+++.+||+.||++|||+.+|+..
T Consensus 218 ---~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 218 ---KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 11122334568899999999999999999999865
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=271.74 Aligned_cols=231 Identities=23% Similarity=0.291 Sum_probs=184.6
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
+|++.+.||.|+||.||+|+.. +++.||+|.+.... .....+.+|+++++.++|+||+++++++.++...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 4677889999999999999954 58899999986532 33456889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceeecc
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
++++|.+++... .+++..+..++.|++.||.|||+.++ .++|+|||+++....... .....
T Consensus 82 ~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--~~~~~ 158 (274)
T cd06609 82 GGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS--KRNTF 158 (274)
T ss_pred CCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccc--ccccc
Confidence 999999998765 78999999999999999999997643 689999999987754321 13345
Q ss_pred cccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
.|+..|+|||.+.+..++.++||||||+++|||++|+.||...... ..... +.....+.
T Consensus 159 ~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~---------~~~~~------------~~~~~~~~ 217 (274)
T cd06609 159 VGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM---------RVLFL------------IPKNNPPS 217 (274)
T ss_pred cCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH---------HHHHH------------hhhcCCCC
Confidence 6888999999999888999999999999999999999998632110 00000 00001111
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+... ..+..+.+++.+||+.+|++|||+++++++
T Consensus 218 ~~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 218 LEGN---KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred Cccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1110 134568889999999999999999999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-31 Score=273.98 Aligned_cols=241 Identities=24% Similarity=0.305 Sum_probs=186.8
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCC-Cc----EEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLAD-GR----AVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
....+++.+.||+|+||.||+|...+ +. .+|+|.+.... .....+.+|+.++++++||||+++++++.. ...
T Consensus 5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 45667888999999999999998543 32 68999886543 334678899999999999999999999987 788
Q ss_pred EEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ ..+||+|||+++......
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~ 163 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE 163 (279)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence 9999999999999999764 36899999999999999999999763 367999999998775443
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.........++..|+|||.+....++.++||||||+++|||++ |+.||..... ..+.. .+....
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---------~~~~~----~~~~~~-- 228 (279)
T cd05057 164 KEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA---------VEIPD----LLEKGE-- 228 (279)
T ss_pred cceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH---------HHHHH----HHhCCC--
Confidence 3222222234578999999988889999999999999999998 9999863211 11111 111100
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
....+......+.+++.+||..||.+||++.++++.|+.+..
T Consensus 229 ----------~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 229 ----------RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred ----------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 011112233568889999999999999999999999998744
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-31 Score=272.74 Aligned_cols=230 Identities=24% Similarity=0.327 Sum_probs=176.0
Q ss_pred cccCeeceeEEEEeeeCC-Cc--EEEEEEeCcc--cccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLAD-GR--AVAVKRLGDL--HQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~-~~--~vavK~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|+||.||+|+..+ +. .+|+|.++.. ....+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 468999999999999644 33 5788988743 23446788999999999 799999999999999999999999999
Q ss_pred CCHhhhcccCC----------------CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCccc
Q 041821 542 QSLDKHLFSSY----------------FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAK 589 (736)
Q Consensus 542 gsL~~~l~~~~----------------~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~ 589 (736)
++|.+++.... .+++.++..++.|++.||+|||+.+ ..+||+|||+++
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence 99999986432 4789999999999999999999753 368999999986
Q ss_pred ccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHH
Q 041821 590 LSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKI 668 (736)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (736)
...... .......+..|+|||++....++.++||||||+++|||++ |..||..... .......
T Consensus 161 ~~~~~~---~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~---------~~~~~~~---- 224 (270)
T cd05047 161 GQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---------AELYEKL---- 224 (270)
T ss_pred ccchhh---hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH---------HHHHHHH----
Confidence 322111 1111224567999999988889999999999999999997 8888853210 1111111
Q ss_pred hhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 669 LYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 669 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
... .....+......+.+++.+||+.||.+|||+.++++.|+++.
T Consensus 225 ~~~------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 225 PQG------------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred hCC------------CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 000 011112223456889999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-31 Score=291.79 Aligned_cols=248 Identities=19% Similarity=0.239 Sum_probs=176.3
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeC--------Ce
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG--------RH 531 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------~~ 531 (736)
...|.+.+.||+|+||.||+|.. ..++.||||++..... ...+|+.+|+.++|||||++++++... ..
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ---YKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 34688899999999999999995 4588999998854322 234799999999999999999987432 24
Q ss_pred EEEEEecCCCCCHhhhcc----cCCCCCHHHHHHHHHHHHHHhhhhhcCC-----------------CccEEcccCcccc
Q 041821 532 RLLIYEYVEKQSLDKHLF----SSYFLGWKERFKVALGTAKGLAYLHHDE-----------------FEPKIADFGLAKL 590 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~----~~~~l~~~~~~~i~~~i~~gL~yLH~~~-----------------~~~kl~DFGla~~ 590 (736)
.++||||++ ++|.+++. ....+++..+..++.||++||+|||+.+ ..+||+|||+|+.
T Consensus 142 l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~ 220 (440)
T PTZ00036 142 LNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKN 220 (440)
T ss_pred EEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchh
Confidence 679999998 56766654 3447899999999999999999999753 2589999999987
Q ss_pred cCCCCCcceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH----
Q 041821 591 SQRGSNSSQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK---- 665 (736)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---- 665 (736)
+..... .....||+.|||||++.+. .++.++|||||||++|||++|.+||..... ...+........
T Consensus 221 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~-----~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 221 LLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSS-----VDQLVRIIQVLGTPTE 292 (440)
T ss_pred ccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHhCCCCH
Confidence 654332 2345689999999998764 699999999999999999999999974321 111111111100
Q ss_pred HHHhhhcccc----ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 666 RKILYEEEAW----IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 666 ~~~~~~~~~~----~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.........+ +..+....+...++...+..+.+|+.+||+.||.+|||+.|+++|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0000000000 000111111111222334678999999999999999999999976
|
|
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=267.63 Aligned_cols=231 Identities=24% Similarity=0.334 Sum_probs=180.5
Q ss_pred cccCeeceeEEEEeeeCCCcEEEEEEeCcccc--cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCHh
Q 041821 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQ--GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLD 545 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 545 (736)
++||+|+||.||++...+++.||+|.+..... ....+.+|++++++++|+||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 47999999999999976699999999865432 4567899999999999999999999999999999999999999999
Q ss_pred hhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccccCc
Q 041821 546 KHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGTKG 608 (736)
Q Consensus 546 ~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~ 608 (736)
+++... ..+++..+..++.+++.||.|||+++ ..+||+|||+++...............++..
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~ 160 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIK 160 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceec
Confidence 998653 46889999999999999999999763 3689999999986543221111112234567
Q ss_pred ccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCC
Q 041821 609 YMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGK 687 (736)
Q Consensus 609 y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 687 (736)
|+|||.+.+..++.++||||||+++|||++ |..||..... ..... ... ......
T Consensus 161 y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~---------~~~~~----~~~------------~~~~~~ 215 (251)
T cd05041 161 WTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN---------QQTRE----RIE------------SGYRMP 215 (251)
T ss_pred cCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH---------HHHHH----HHh------------cCCCCC
Confidence 999999988889999999999999999999 7777753211 00000 000 000111
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 688 FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 688 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
.+...+..+.+++.+||+.+|++|||+.||++.|++
T Consensus 216 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 216 APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 222345678999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=269.66 Aligned_cols=233 Identities=20% Similarity=0.254 Sum_probs=177.9
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc------ccHHHHHHHHHHHhcCCCCceeeEEEEEEe--CCeEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH------QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE--GRHRL 533 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 533 (736)
.|...+.||+|+||.||+|.. ..+..||+|++.... +..+.+.+|+.++++++||||+++++++.+ ....+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 356778999999999999985 458899999885421 223467889999999999999999998875 35778
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC-
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN- 596 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~- 596 (736)
+++||+++++|.+++.....+++.....++.|++.||.|||+.+ ..+||+|||+++.......
T Consensus 83 l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS 162 (266)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc
Confidence 99999999999999987777999999999999999999999764 3689999999986543211
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
........++..|+|||.+.+..++.++|||||||++|||++|+.||..... . ...... .
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~--------~----~~~~~~--------~ 222 (266)
T cd06651 163 GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA--------M----AAIFKI--------A 222 (266)
T ss_pred CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch--------H----HHHHHH--------h
Confidence 1112335588999999999988899999999999999999999999863210 0 000000 0
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..... ...+....+.+.+++ +||..+|++||+++||++|
T Consensus 223 ~~~~~----~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 223 TQPTN----PQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred cCCCC----CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 00011 122333345566666 6888999999999999865
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=270.47 Aligned_cols=232 Identities=25% Similarity=0.320 Sum_probs=182.8
Q ss_pred hhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccc----------cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQ----------GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
+.+...||+|+||.||+|.. .+++.+|+|.+..... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 45678899999999999985 4578999998854221 124578899999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~ 596 (736)
++||||+++++|.+++.....+++..+..++.|++.||+|||+.+ ..+||+|||+++.......
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSL 161 (267)
T ss_pred EEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccc
Confidence 999999999999999988778999999999999999999999764 3689999999987653211
Q ss_pred cc----eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhc
Q 041821 597 SS----QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 597 ~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (736)
.. ......|+..|+|||.+.+..++.++||||||+++|||++|+.||..... .... ..
T Consensus 162 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~----~~------ 223 (267)
T cd06628 162 STKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ--------LQAI----FK------ 223 (267)
T ss_pred cCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH--------HHHH----HH------
Confidence 11 11234588999999999988899999999999999999999999863211 0000 00
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......+ ..+......+.+++.+||+.||++||++.+|+++
T Consensus 224 ---~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 224 ---IGENASP----EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred ---HhccCCC----cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 0111111 1223345678899999999999999999999874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-31 Score=265.87 Aligned_cols=238 Identities=19% Similarity=0.182 Sum_probs=191.2
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
+-...+++.+.||.|.-|+||++++.+ +..+|+|++.+.. +...+...|-+||+.++||.+..||..++.++..+
T Consensus 74 l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~c 153 (459)
T KOG0610|consen 74 LGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSC 153 (459)
T ss_pred cCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeE
Confidence 334556778899999999999999755 5899999997643 33355678999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhc----------------CCCccEEcccCcccccCC--
Q 041821 534 LIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHH----------------DEFEPKIADFGLAKLSQR-- 593 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~----------------~~~~~kl~DFGla~~~~~-- 593 (736)
++||||+||+|..+++++. .+++..++-++.+++-||+|||- +++++.|+||.|+.....
T Consensus 154 l~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 154 LVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred EEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 9999999999999988765 79999999999999999999994 366899999998742210
Q ss_pred -------------------------------CCC---------------------cceeecccccCcccChhcccCCCCc
Q 041821 594 -------------------------------GSN---------------------SSQFSQIRGTKGYMAPEWASNLPIT 621 (736)
Q Consensus 594 -------------------------------~~~---------------------~~~~~~~~gt~~y~aPE~~~~~~~~ 621 (736)
... .......+||-.|+|||++.+...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 000 0011236899999999999999999
Q ss_pred cccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHH
Q 041821 622 AKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGI 701 (736)
Q Consensus 622 ~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~ 701 (736)
.++|.|+|||++|||+.|..||........ +..++-..+.-...+..+..+.+||.
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~T------------------------l~NIv~~~l~Fp~~~~vs~~akDLIr 369 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKET------------------------LRNIVGQPLKFPEEPEVSSAAKDLIR 369 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCchhh------------------------HHHHhcCCCcCCCCCcchhHHHHHHH
Confidence 999999999999999999999986543222 33333333333333456678999999
Q ss_pred HcccCCCCCCCC----HHHHHHH
Q 041821 702 SCVDEDRSKRPT----MDSVVQS 720 (736)
Q Consensus 702 ~cl~~dP~~RPs----~~evl~~ 720 (736)
+.|.+||++|.- +.||.+|
T Consensus 370 ~LLvKdP~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 370 KLLVKDPSKRLGSKRGAAEIKRH 392 (459)
T ss_pred HHhccChhhhhccccchHHhhcC
Confidence 999999999997 8888765
|
|
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=287.06 Aligned_cols=235 Identities=20% Similarity=0.177 Sum_probs=179.2
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.|++.+.||+|+||.||+++.. +++.||||++.... .....+.+|+.++..++||||+++++.+.+.+..+||||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 4677889999999999999954 58899999996422 234567889999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc----
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS---- 597 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~---- 597 (736)
|+++|+|.+++.....+++..+..++.|++.||.|||+.+ ..+||+|||+++.+......
T Consensus 82 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~ 161 (360)
T cd05627 82 FLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYR 161 (360)
T ss_pred CCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccccccc
Confidence 9999999999988778999999999999999999999763 36899999998755321100
Q ss_pred -----------------------------ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCcccc
Q 041821 598 -----------------------------SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVE 648 (736)
Q Consensus 598 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~ 648 (736)
......+||+.|||||++.+..++.++|||||||++|||++|+.||.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~ 241 (360)
T cd05627 162 NLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP 241 (360)
T ss_pred ccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCH
Confidence 001235799999999999999999999999999999999999999964321
Q ss_pred CCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC---HHHHHHH
Q 041821 649 DGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT---MDSVVQS 720 (736)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~ 720 (736)
. .... .+... ...+.-+ . .......+.+++.+++. ||.+|++ +.++++|
T Consensus 242 ~---------~~~~----~i~~~----~~~~~~p---~--~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 242 Q---------ETYR----KVMNW----KETLVFP---P--EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred H---------HHHH----HHHcC----CCceecC---C--CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 0 0001 11000 0000000 0 01123467778877764 9999984 6787766
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=273.17 Aligned_cols=235 Identities=22% Similarity=0.305 Sum_probs=180.6
Q ss_pred HHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEe------CCe
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE------GRH 531 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~------~~~ 531 (736)
....|++.+.||+|+||.||+|+. .+++.+|+|.+.........+..|+.+++++ +|+||+++++++.. ...
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 93 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ 93 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCE
Confidence 345678889999999999999995 4588999999876555556788999999998 69999999999853 467
Q ss_pred EEEEEecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQR 593 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~ 593 (736)
.+++|||+++|+|.+++... ..+++..+..++.||+.||.|||+.++ .+||+|||++.....
T Consensus 94 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~ 173 (282)
T cd06636 94 LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 173 (282)
T ss_pred EEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhc
Confidence 89999999999999998653 358888999999999999999997643 689999999876543
Q ss_pred CCCcceeecccccCcccChhccc-----CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHH
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWAS-----NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKI 668 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (736)
... ......|++.|+|||.+. +..++.++|||||||++|||++|+.||...... .... .
T Consensus 174 ~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~--------~~~~-~----- 237 (282)
T cd06636 174 TVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM--------RALF-L----- 237 (282)
T ss_pred ccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH--------hhhh-h-----
Confidence 221 123456899999999876 345888999999999999999999998632110 0000 0
Q ss_pred hhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 669 LYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 669 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......+.. .....+..+.+++.+||+.||.+||++.||+++
T Consensus 238 -------~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 238 -------IPRNPPPKL---KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred -------HhhCCCCCC---cccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 000001111 111234578999999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-31 Score=278.01 Aligned_cols=243 Identities=23% Similarity=0.316 Sum_probs=184.3
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCc----EEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGR----AVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
....++..+.||+|+||.||+|... ++. .||+|.+.... ....++.+|+.+++.++||||+++++++... ..
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~ 83 (303)
T cd05110 5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI 83 (303)
T ss_pred chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence 3455667789999999999999853 343 57999886543 2234688999999999999999999998764 46
Q ss_pred EEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
++++||+++|+|.+++.... .+++..+..++.|++.||.|||+.+ ..+||+|||+++......
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~ 163 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 163 (303)
T ss_pred eeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcc
Confidence 79999999999999987654 6899999999999999999999763 368999999998765433
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.........++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ... ..... ..+.
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~------~~~---~~~~~----~~~~-- 228 (303)
T cd05110 164 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP------TRE---IPDLL----EKGE-- 228 (303)
T ss_pred cccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC------HHH---HHHHH----HCCC--
Confidence 2222233445778999999998889999999999999999997 888875321 011 11110 0000
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
....+......+.+++.+||..+|++||+++++++.|+.+.++.
T Consensus 229 ----------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 229 ----------RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred ----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 00111223457889999999999999999999999999875443
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=276.82 Aligned_cols=249 Identities=22% Similarity=0.277 Sum_probs=180.9
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
++|.+.++||+|+||.||+|+.. +++.||+|.++... .....+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56788899999999999999954 57889999986432 2334677899999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
++ ++|.+++.... .+++..+..++.|++.||.|||+.+ ..+||+|||+++........ ..
T Consensus 86 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~ 162 (309)
T cd07872 86 LD-KDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKT--YS 162 (309)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccc--cc
Confidence 97 48888776543 5899999999999999999999763 36899999999765433221 23
Q ss_pred cccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHH-------HHHHHhhhcc
Q 041821 602 QIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVRE-------VKRKILYEEE 673 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 673 (736)
...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ......... .+..+....
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~- 236 (309)
T cd07872 163 NEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-----DELHLIFRLLGTPTEETWPGISSND- 236 (309)
T ss_pred cccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCCCCHHHHhhhcchh-
Confidence 4567899999999865 45899999999999999999999999643211 111111100 000000000
Q ss_pred ccccccccCccCC----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKG----KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ......+.... .........+.+++.+||+.||++|||+.|++++
T Consensus 237 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 237 E-FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred h-hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 0 00000000000 0011234567899999999999999999999985
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=276.30 Aligned_cols=179 Identities=22% Similarity=0.286 Sum_probs=144.5
Q ss_pred ccccCeeceeEEEEeeeC---CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEe--CCeEEEEEecCCC
Q 041821 467 KEELGRGGSGAVYKGVLA---DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE--GRHRLLIYEYVEK 541 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~~ 541 (736)
.++||+|+||.||+|+.. +++.+|+|.+..... ...+.+|+.+|++++||||+++++++.. +...+++|||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-
Confidence 358999999999999854 467899999865432 3456789999999999999999998854 456899999996
Q ss_pred CCHhhhcccC---------CCCCHHHHHHHHHHHHHHhhhhhcCC--------------------CccEEcccCcccccC
Q 041821 542 QSLDKHLFSS---------YFLGWKERFKVALGTAKGLAYLHHDE--------------------FEPKIADFGLAKLSQ 592 (736)
Q Consensus 542 gsL~~~l~~~---------~~l~~~~~~~i~~~i~~gL~yLH~~~--------------------~~~kl~DFGla~~~~ 592 (736)
++|.+++... ..+++..+..++.||+.||.|||+.+ ..+||+|||+++...
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence 5887776421 25889999999999999999999763 258999999998765
Q ss_pred CCCCc-ceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccc
Q 041821 593 RGSNS-SQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVV 647 (736)
Q Consensus 593 ~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~ 647 (736)
..... .......||+.|||||++.+. .++.++||||+||++|||++|++||....
T Consensus 164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 164 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred CCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 43221 123456789999999998764 58999999999999999999999997543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=269.81 Aligned_cols=233 Identities=25% Similarity=0.320 Sum_probs=174.4
Q ss_pred cccCeeceeEEEEeeeCC----CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEE-eCCeEEEEEecCC
Q 041821 468 EELGRGGSGAVYKGVLAD----GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCS-EGRHRLLIYEYVE 540 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~~ 540 (736)
+.||+|+||.||+|...+ ...||+|++.... ...+.+.+|+.+++.++||||+++++++. .++..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999998432 4579999985432 33467889999999999999999999876 4556789999999
Q ss_pred CCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc--eee
Q 041821 541 KQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS--QFS 601 (736)
Q Consensus 541 ~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~--~~~ 601 (736)
+++|.+++.... .+++..+..++.|+++||+|||+.+ ..+||+|||+++......... ...
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 160 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHT 160 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccc
Confidence 999999997643 5678888999999999999999753 368999999998654322111 112
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCC-CCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIR-LSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...++..|+|||.+....++.++|||||||++|||++|.. |+.... . ....... ..+.
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~------~---~~~~~~~----~~~~-------- 219 (262)
T cd05058 161 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD------S---FDITVYL----LQGR-------- 219 (262)
T ss_pred cCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC------H---HHHHHHH----hcCC--------
Confidence 3346778999999988889999999999999999999654 443211 0 0111111 0000
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
.+ ..+...+..+.+++.+||+.+|++||++.+|++.|+++.
T Consensus 220 ~~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 220 RL----LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CC----CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 00 111122457889999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=267.75 Aligned_cols=232 Identities=19% Similarity=0.246 Sum_probs=185.1
Q ss_pred hhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 463 TKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
.|++.+.||+|+||.||.++ ..+++.+++|.+... ....+.+.+|+.++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 36788999999999999998 455889999988543 23446688999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 539 VEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 539 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
+++++|.+++... ..+++..+..++.|+++||.|||+.+ ..+||+|||++........ ..
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~--~~ 158 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS--MA 158 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc--cc
Confidence 9999999999765 36899999999999999999999753 3689999999987644332 13
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
....|++.|+|||.+.+..++.++||||||+++|||++|..||..... ....... ..+
T Consensus 159 ~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~---------~~~~~~~----~~~--------- 216 (256)
T cd08221 159 ETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP---------LNLVVKI----VQG--------- 216 (256)
T ss_pred cccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH---------HHHHHHH----HcC---------
Confidence 345689999999999888899999999999999999999999863211 0111111 111
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
.. ...+...+..+.+++.+||+.+|++||++.++++++
T Consensus 217 --~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 217 --NY-TPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred --CC-CCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 00 011123346788999999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=271.71 Aligned_cols=232 Identities=25% Similarity=0.283 Sum_probs=180.0
Q ss_pred hhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
|...+.||+|+||+||++.. .+++.+|+|.+.... .....+.+|+++|++++|+||+++++.+..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 45667899999999999995 468899999986532 2234578899999999999999999999999999999999
Q ss_pred CCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCccee
Q 041821 539 VEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 539 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~ 600 (736)
+++++|..++... ..+++..+..++.|++.||.|||+.++ .+||+|||++........ .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~---~ 158 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES---I 158 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc---c
Confidence 9999999888653 369999999999999999999997643 689999999976543221 2
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
....|+..|+|||++.+..++.++||||||+++|||++|..||...... ... ..+....... .
T Consensus 159 ~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~-----~~~----~~~~~~~~~~-----~--- 221 (285)
T cd05632 159 RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK-----VKR----EEVDRRVLET-----E--- 221 (285)
T ss_pred cCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH-----HHH----HHHHHhhhcc-----c---
Confidence 3456899999999999888999999999999999999999998643210 000 1111111110 0
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT-----MDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 720 (736)
...+......+.+|+.+||+.||++||+ +.+++.+
T Consensus 222 -----~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 222 -----EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred -----cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 0112223446788999999999999999 7777765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=284.12 Aligned_cols=227 Identities=25% Similarity=0.345 Sum_probs=179.9
Q ss_pred hcccccCeeceeEEEEeeeC-CCcEEEEEEe-----CcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe--EEEEE
Q 041821 465 SFKEELGRGGSGAVYKGVLA-DGRAVAVKRL-----GDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH--RLLIY 536 (736)
Q Consensus 465 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~-----~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~ 536 (736)
.|.++||+|+|-+||||... +|..||--.+ .+.....+.|..|+.+|+.|+|||||+++.++.+... .-+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 45678999999999999964 3667763222 2233444789999999999999999999999988665 67899
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC-------------------CccEEcccCcccccCCCCCc
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE-------------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-------------------~~~kl~DFGla~~~~~~~~~ 597 (736)
|.|..|+|..|+++.+.++.+.++.+++||++||.|||+++ +.+||+|+|||.......
T Consensus 123 EL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~-- 200 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH-- 200 (632)
T ss_pred ecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc--
Confidence 99999999999999999999999999999999999999752 378999999999876543
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
...++|||.|||||+.. ..|++.+||||||+.++||+|+..|+..... .+.+.+.+...+++.. +.
T Consensus 201 --aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n--------~AQIYKKV~SGiKP~s---l~ 266 (632)
T KOG0584|consen 201 --AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTN--------PAQIYKKVTSGIKPAA---LS 266 (632)
T ss_pred --cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCC--------HHHHHHHHHcCCCHHH---hh
Confidence 44589999999999988 6699999999999999999999999874321 1222222222221111 33
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+-| ..+.++|.+||.. ..+|||+.|+|.+
T Consensus 267 kV~d------------Pevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 267 KVKD------------PEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred ccCC------------HHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 3333 3567899999999 9999999999875
|
|
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=271.54 Aligned_cols=234 Identities=22% Similarity=0.286 Sum_probs=181.3
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
-|++.++||+|+||.||+|... ++..+|+|.+.... ...+.+.+|+++++.++||||+++++++..++..++||||++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 3677889999999999999954 47788999986543 345678899999999999999999999999999999999999
Q ss_pred CCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecc
Q 041821 541 KQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 541 ~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
+++|..++.. ...+++..+..++.|+++||.|||+.+ ..+||+|||++........ .....
T Consensus 86 ~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~ 163 (282)
T cd06643 86 GGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ--RRDSF 163 (282)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccc--ccccc
Confidence 9999988764 447999999999999999999999763 3689999999876533221 12345
Q ss_pred cccCcccChhccc-----CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 604 RGTKGYMAPEWAS-----NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 604 ~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.++..|+|||++. +..++.++|||||||++|||++|++||..... .. ...... ..
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--------~~-~~~~~~----~~------- 223 (282)
T cd06643 164 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP--------MR-VLLKIA----KS------- 223 (282)
T ss_pred cccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH--------HH-HHHHHh----hc-------
Confidence 6899999999984 44578899999999999999999999863211 00 000000 00
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
..+.. ..+...+..+.+++.+||+.||.+||++.+++++-
T Consensus 224 -~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 224 -EPPTL--AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred -CCCCC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence 00000 11222346788999999999999999999998764
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=269.00 Aligned_cols=230 Identities=25% Similarity=0.270 Sum_probs=182.9
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc------ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH------QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
|...+.||+|+||.||+|... +++.||+|.+.... +..+.+.+|+.+++.++|+||+++++++.++...++++
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 556688999999999999965 68999999985432 23467889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
||+++++|.+++.....+++..+..++.|+++||+|||+.+ ..+||+|||++....... ..
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~---~~ 158 (258)
T cd06632 82 ELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS---FA 158 (258)
T ss_pred EecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc---cc
Confidence 99999999999987777999999999999999999999653 368999999998764433 12
Q ss_pred ecccccCcccChhcccCCC-CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLP-ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....|+..|+|||.+.... ++.++|+||||+++|||++|+.||..... ...... . .. ..
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~--------~~~~~~-~----~~-----~~-- 218 (258)
T cd06632 159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG--------VAAVFK-I----GR-----SK-- 218 (258)
T ss_pred cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH--------HHHHHH-H----Hh-----cc--
Confidence 3456889999999987766 89999999999999999999999863210 000000 0 00 00
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.....+......+.+++.+||+.+|++||++.+++.+
T Consensus 219 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 219 ----ELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred ----cCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 0011222334677889999999999999999999864
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-31 Score=303.47 Aligned_cols=237 Identities=19% Similarity=0.236 Sum_probs=182.7
Q ss_pred HHHHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEe--C
Q 041821 456 YAELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE--G 529 (736)
Q Consensus 456 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~ 529 (736)
..++....|.+.++||+|+||+||+++.. .+..+|+|.+... ......+..|+.+|++|+|||||++++++.+ .
T Consensus 7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~ 86 (1021)
T PTZ00266 7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN 86 (1021)
T ss_pred CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence 34556678999999999999999999954 4778999998643 2334668899999999999999999998865 4
Q ss_pred CeEEEEEecCCCCCHhhhcccC----CCCCHHHHHHHHHHHHHHhhhhhcCC-------C--------------------
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSS----YFLGWKERFKVALGTAKGLAYLHHDE-------F-------------------- 578 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~i~~gL~yLH~~~-------~-------------------- 578 (736)
...+|||||+++++|.++|... ..+++..++.|+.||+.||.|||+.+ +
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg 166 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG 166 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence 5689999999999999988652 46999999999999999999999621 1
Q ss_pred -------------ccEEcccCcccccCCCCCcceeecccccCcccChhcccC--CCCccccceechhHHHHHHHhCCCCC
Q 041821 579 -------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN--LPITAKVDVYSYGVVILEMVKGIRLS 643 (736)
Q Consensus 579 -------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~el~tg~~p~ 643 (736)
.+||+|||+++.+..... .....||+.|+|||++.+ ..++.++||||||||||||++|+.||
T Consensus 167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF 243 (1021)
T PTZ00266 167 KITAQANNLNGRPIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPF 243 (1021)
T ss_pred cccccccccCCCCceEEccCCcccccccccc---ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCC
Confidence 279999999987644322 234579999999999864 45899999999999999999999999
Q ss_pred CccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 644 NWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..... ...+...+.. . +.+. ....+..+.+||..||+.+|.+||++.+++.+
T Consensus 244 ~~~~~--------~~qli~~lk~----~----------p~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 244 HKANN--------FSQLISELKR----G----------PDLP---IKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred CcCCc--------HHHHHHHHhc----C----------CCCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 63211 1111111110 0 0000 01124578899999999999999999999853
|
|
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=278.90 Aligned_cols=236 Identities=17% Similarity=0.098 Sum_probs=176.7
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
+|++.+.||+|+||.||+++. .+++.||||++.+.. ...+.+.+|+.++..++|+||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 577889999999999999995 458899999996422 233557889999999999999999999999999999999
Q ss_pred cCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 538 YVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 538 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|+++|+|.+++.+ ...+++..+..++.||+.||+|||+.+ ..+||+|||++..+....... .
T Consensus 82 ~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-~ 160 (331)
T cd05597 82 YYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ-S 160 (331)
T ss_pred cCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc-c
Confidence 9999999999976 347899999999999999999999763 368999999997654432211 2
Q ss_pred ecccccCcccChhcccC-----CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 601 SQIRGTKGYMAPEWASN-----LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
....||+.|||||++.. ..++.++|||||||++|||++|+.||..... ..... .+...
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~---------~~~~~----~i~~~---- 223 (331)
T cd05597 161 NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL---------VETYG----KIMNH---- 223 (331)
T ss_pred cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH---------HHHHH----HHHcC----
Confidence 23469999999999863 4578899999999999999999999863211 00001 11000
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccC--CCCCCCCHHHHHHH
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDE--DRSKRPTMDSVVQS 720 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~--dP~~RPs~~evl~~ 720 (736)
..... +. ......+..+.+++.+|+.. ++..||++.+++++
T Consensus 224 -~~~~~--~~-~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 224 -KEHFQ--FP-PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred -CCccc--CC-CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 00000 00 01112345677778777654 44447899999987
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=269.30 Aligned_cols=229 Identities=25% Similarity=0.290 Sum_probs=177.7
Q ss_pred ccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 467 KEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
...||+|+||.||+|+. .++..||+|.+.... ...+.+.+|+.++++++|+||+++++++..++..++|+||+++++|
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 92 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSL 92 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCH
Confidence 34799999999999994 457889999986543 3456789999999999999999999999999999999999999999
Q ss_pred hhhcccC-CCC--CHHHHHHHHHHHHHHhhhhhcCCC-----------------ccEEcccCcccccCCCCCcceeeccc
Q 041821 545 DKHLFSS-YFL--GWKERFKVALGTAKGLAYLHHDEF-----------------EPKIADFGLAKLSQRGSNSSQFSQIR 604 (736)
Q Consensus 545 ~~~l~~~-~~l--~~~~~~~i~~~i~~gL~yLH~~~~-----------------~~kl~DFGla~~~~~~~~~~~~~~~~ 604 (736)
.+++... ..+ ++..+..++.||++||+|||+.++ .+||+|||++......... .....
T Consensus 93 ~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~ 170 (268)
T cd06624 93 SALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPC--TETFT 170 (268)
T ss_pred HHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCc--cccCC
Confidence 9999764 345 888899999999999999997632 6899999999765432221 23345
Q ss_pred ccCcccChhcccCCC--CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 605 GTKGYMAPEWASNLP--ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 605 gt~~y~aPE~~~~~~--~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
|++.|+|||++.... ++.++||||||+++|||++|+.||....... .. .. ... ..
T Consensus 171 ~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~------~~-~~---~~~--------~~----- 227 (268)
T cd06624 171 GTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ------AA-MF---KVG--------MF----- 227 (268)
T ss_pred CCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh------hh-Hh---hhh--------hh-----
Confidence 889999999986543 7899999999999999999999986321100 00 00 000 00
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......+......+.+++.+||+.+|++|||+.+++.+
T Consensus 228 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 228 KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 00111233345678899999999999999999999875
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=270.87 Aligned_cols=237 Identities=25% Similarity=0.315 Sum_probs=181.5
Q ss_pred hhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----c-------cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----Q-------GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 531 (736)
|...+.||+|+||.||+|.. .+++.+|+|.++... . ..+.+.+|+.++++++||||+++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 45667899999999999984 468899999885311 0 12457789999999999999999999999999
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.++||||+++++|.+++.....+++..+..++.||+.||.|||+.+ ..+||+|||+++......
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 162 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIY 162 (272)
T ss_pred eEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccc
Confidence 9999999999999999988778999999999999999999999763 368999999997654332
Q ss_pred CcceeecccccCcccChhcccCCC--CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLP--ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
.........|+..|+|||.+.... ++.++||||||+++|||++|..|+..... ...... .
T Consensus 163 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--------~~~~~~----~------ 224 (272)
T cd06629 163 DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA--------IAAMFK----L------ 224 (272)
T ss_pred cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch--------HHHHHH----h------
Confidence 222233456889999999987654 88999999999999999999999852210 000000 0
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......+..........+..+.+++.+||+.+|++|||+.+|+++
T Consensus 225 --~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 225 --GNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred --hccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 000001111111222345678899999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=271.37 Aligned_cols=221 Identities=23% Similarity=0.359 Sum_probs=169.9
Q ss_pred ccCeeceeEEEEeeeCC-------------------------CcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeE
Q 041821 469 ELGRGGSGAVYKGVLAD-------------------------GRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRM 522 (736)
Q Consensus 469 ~lG~G~fg~Vy~~~~~~-------------------------~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l 522 (736)
+||+|+||.||+|.+.. ...||+|.+.... .....+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997421 2358999986543 234568889999999999999999
Q ss_pred EEEEEeCCeEEEEEecCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCCC-----------------------
Q 041821 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDEF----------------------- 578 (736)
Q Consensus 523 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------------- 578 (736)
++++.++...++||||+++|+|..++.. ...+++..+..++.||++||+|||+.++
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~ 161 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSP 161 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccc
Confidence 9999999999999999999999999865 4478999999999999999999997643
Q ss_pred ccEEcccCcccccCCCCCcceeecccccCcccChhcccC-CCCccccceechhHHHHHHH-hCCCCCCccccCCccchhH
Q 041821 579 EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMV-KGIRLSNWVVEDGEGQEAE 656 (736)
Q Consensus 579 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~-tg~~p~~~~~~~~~~~~~~ 656 (736)
.+||+|||++...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|..||...... .
T Consensus 162 ~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~------~ 229 (274)
T cd05076 162 FIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS------E 229 (274)
T ss_pred eeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH------H
Confidence 2689999987644221 22347888999998875 56899999999999999995 688887532110 0
Q ss_pred HHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 657 LKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
...+. . . . .. .+......+.+++.+||+.+|++|||+.+|++.|+
T Consensus 230 ~~~~~----~----~----~-----~~----~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 KERFY----E----K----K-----HR----LPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHH----H----h----c-----cC----CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 00100 0 0 0 00 01111246888999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=271.36 Aligned_cols=236 Identities=23% Similarity=0.283 Sum_probs=179.9
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEE-----eCCeEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCS-----EGRHRL 533 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~-----~~~~~~ 533 (736)
..+|++.+.||+|+||.||+++. ..++.+|+|.+.........+.+|+.+++++ +||||+++++++. .++..+
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~ 96 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLW 96 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEE
Confidence 45678889999999999999985 4578999999876555556788999999999 6999999999884 345789
Q ss_pred EEEecCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCC
Q 041821 534 LIYEYVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQR 593 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~ 593 (736)
+||||+++++|.+++.. ...+++..+..++.|+++||.|||+.+ ..+||+|||+++....
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~ 176 (286)
T cd06638 97 LVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTS 176 (286)
T ss_pred EEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeeccc
Confidence 99999999999988652 346889999999999999999999753 3589999999986643
Q ss_pred CCCcceeecccccCcccChhcccC-----CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHH
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASN-----LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKI 668 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (736)
.... .....|++.|+|||++.. ..++.++|||||||++|||++|+.|+...... ..+..
T Consensus 177 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~--------~~~~~------ 240 (286)
T cd06638 177 TRLR--RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM--------RALFK------ 240 (286)
T ss_pred CCCc--cccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh--------HHHhh------
Confidence 3221 233568999999998753 45789999999999999999999998633110 00000
Q ss_pred hhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 669 LYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 669 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
......+.. ..+......+.+++.+||+.||++|||+.||++++
T Consensus 241 -------~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 241 -------IPRNPPPTL--HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred -------ccccCCCcc--cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 000000000 01112235688999999999999999999999874
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=270.36 Aligned_cols=251 Identities=18% Similarity=0.290 Sum_probs=184.7
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
.|++.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|+.++++++||||+++++++..+...++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 4778889999999999999965 58999999986432 2345678999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
++++.|..++.....+++..+..++.|++.||.|||+.+ ..+||+|||++......... ...
T Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~ 159 (286)
T cd07847 82 CDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDD--YTD 159 (286)
T ss_pred cCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCccc--ccC
Confidence 999999988877667999999999999999999999763 36899999999876543321 233
Q ss_pred ccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH---HH-H-hhhccccc
Q 041821 603 IRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK---RK-I-LYEEEAWI 676 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~~~~~~~~ 676 (736)
..++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ........... .. . ......+.
T Consensus 160 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07847 160 YVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV-----DQLYLIRKTLGDLIPRHQQIFSTNQFF 234 (286)
T ss_pred cccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCCCChHHhhhccccccc
Confidence 457889999999876 55889999999999999999999998643211 11111100000 00 0 00000001
Q ss_pred cccccCccCCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGKFN-----TNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.....+......+ ......+.+++.+||+.+|++||++.|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 1111111111111 1224678899999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=288.09 Aligned_cols=254 Identities=18% Similarity=0.180 Sum_probs=180.6
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
...|.+.+.||+|+||.||+++.. .++.||||.... ..+.+|+++|++++|+|||++++++..++..++|||++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~ 242 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY 242 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence 345778899999999999999965 478899996432 23568999999999999999999999999999999999
Q ss_pred CCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 540 EKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 540 ~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
. ++|.+++... ..+++.+++.|+.||++||.|||+.+ ..+||+|||+++.............
T Consensus 243 ~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 321 (461)
T PHA03211 243 R-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYG 321 (461)
T ss_pred C-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccc
Confidence 5 7888887654 46999999999999999999999763 3689999999987654332222334
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCc--cchhHHHHHHHHHHHHHhhhcc----ccc
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGE--GQEAELKRFVREVKRKILYEEE----AWI 676 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~ 676 (736)
..||+.|||||++.+..++.++|||||||+||||++|..++........ .....+...+.........-.. ...
T Consensus 322 ~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~ 401 (461)
T PHA03211 322 IAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLV 401 (461)
T ss_pred cCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHH
Confidence 6799999999999999999999999999999999998876543221111 0111122222211100000000 000
Q ss_pred c-------ccccCccCCC-CC--HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 E-------EIVDPRLKGK-FN--TNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~-------~~~d~~~~~~-~~--~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ....+..... .. ......+.+|+.+||+.||++|||+.||+++
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 402 SQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 0000000000 00 0122467889999999999999999999986
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=268.39 Aligned_cols=236 Identities=26% Similarity=0.376 Sum_probs=183.4
Q ss_pred hhcccccCeeceeEEEEeeeCC-CcEEEEEEeCcccccHH---HHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 464 KSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEE---VFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~---~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
|++.+.||+|+||+||+++... ++.+|+|.+........ ...+|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 5678899999999999999544 67899999976543332 3456999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecc
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
++++|.+++.....+++..+..++.|+++||.|||+.+ ..++|+|||.+..... ........
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~--~~~~~~~~ 158 (260)
T PF00069_consen 81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE--NNENFNPF 158 (260)
T ss_dssp TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS--TTSEBSSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccc
Confidence 99999999986677999999999999999999999763 3689999999986421 12234556
Q ss_pred cccCcccChhccc-CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 604 RGTKGYMAPEWAS-NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 604 ~gt~~y~aPE~~~-~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
.++..|+|||++. +..++.++||||+|+++|+|++|..|+.... .......+............
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~---------- 223 (260)
T PF00069_consen 159 VGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESN-----SDDQLEIIEKILKRPLPSSS---------- 223 (260)
T ss_dssp SSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSS-----HHHHHHHHHHHHHTHHHHHT----------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccc-----chhhhhhhhhcccccccccc----------
Confidence 7899999999998 7889999999999999999999999987431 01111111111111110000
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.. .......+.+++.+||+.||++||++.+++++
T Consensus 224 -~~---~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 224 -QQ---SREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp -TS---HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred -cc---cchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00 00012688999999999999999999999864
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=267.87 Aligned_cols=222 Identities=24% Similarity=0.357 Sum_probs=170.7
Q ss_pred cccCeeceeEEEEeeeCC-------------CcEEEEEEeCcccc-cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 468 EELGRGGSGAVYKGVLAD-------------GRAVAVKRLGDLHQ-GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~-------------~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
+.||+|+||.||+|+... ...||+|.+..... ....+.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999998432 23589998865433 3456788999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCCC-----------------------ccEEcccCccc
Q 041821 534 LIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDEF-----------------------EPKIADFGLAK 589 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~~-----------------------~~kl~DFGla~ 589 (736)
+||||+++++|..++... ..+++..+..++.||++||+|||+.++ .+|++|||++.
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~ 160 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI 160 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence 999999999999988754 468999999999999999999997632 27899999987
Q ss_pred ccCCCCCcceeecccccCcccChhccc-CCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHH
Q 041821 590 LSQRGSNSSQFSQIRGTKGYMAPEWAS-NLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRK 667 (736)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (736)
.... .....++..|||||.+. +..++.++|||||||++|||++ |..|+..... .....+
T Consensus 161 ~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~------~~~~~~------- 221 (262)
T cd05077 161 TVLS------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL------AEKERF------- 221 (262)
T ss_pred cccC------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch------hHHHHH-------
Confidence 5532 22345788999999887 4668999999999999999984 7777642210 000000
Q ss_pred HhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 668 ILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 668 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
... .... .......+.+|+.+||+.||++||++.+|+++|+
T Consensus 222 -~~~----~~~~---------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 222 -YEG----QCML---------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred -Hhc----CccC---------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 000 0000 0112356789999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=278.54 Aligned_cols=236 Identities=17% Similarity=0.108 Sum_probs=178.3
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.|.+.+.||+|+||.||+++.. +++.||+|.+.+.. .....+.+|+.++..++|+||+++++++.+.+..++|||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 5778899999999999999954 57899999986522 223457889999999999999999999999999999999
Q ss_pred cCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 538 YVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 538 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ ..+||+|||+++........ ..
T Consensus 82 y~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~ 160 (331)
T cd05624 82 YYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV-QS 160 (331)
T ss_pred CCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCce-ee
Confidence 9999999999976 457899999999999999999999763 36899999999866543321 12
Q ss_pred ecccccCcccChhcccC-----CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 601 SQIRGTKGYMAPEWASN-----LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
....||+.|||||++.+ ..++.++|||||||++|||++|+.||..... ..... .+....
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~---------~~~~~----~i~~~~--- 224 (331)
T cd05624 161 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL---------VETYG----KIMNHE--- 224 (331)
T ss_pred ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH---------HHHHH----HHHcCC---
Confidence 34569999999999875 4688999999999999999999999963211 00001 110000
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSK--RPTMDSVVQS 720 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 720 (736)
.. ..+ .......+..+.+++.+|+..++++ |+++++++++
T Consensus 225 -~~---~~~-p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 225 -ER---FQF-PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred -Cc---ccC-CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 00 000 0011123467888899988865544 4688888876
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=267.79 Aligned_cols=236 Identities=22% Similarity=0.310 Sum_probs=185.4
Q ss_pred hhcccccCeeceeEEEEee-eCCCcEEEEEEeCccc-------ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 464 KSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLH-------QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
|+..+.||+|+||.||++. ..+++.||+|.+.... ...+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v 81 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF 81 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence 5566889999999999998 4568999999986422 1235688999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-----------------ccEEcccCcccccCCCCCcc
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-----------------EPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-----------------~~kl~DFGla~~~~~~~~~~ 598 (736)
+||+++++|.+++.+..++++..+..++.|++.||.|||+.++ .+||+|||++..........
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 161 (268)
T cd06630 82 VEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA 161 (268)
T ss_pred EeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccC
Confidence 9999999999999877789999999999999999999997643 47999999997665432111
Q ss_pred --eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 599 --QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 599 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
......|+..|+|||.+.+..++.++||||+|++++||++|..||....... .. ....+
T Consensus 162 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-----~~----~~~~~---------- 222 (268)
T cd06630 162 GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN-----HL----ALIFK---------- 222 (268)
T ss_pred CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc-----hH----HHHHH----------
Confidence 1123468899999999988889999999999999999999999986321100 00 00000
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..........+......+.+++.+|++.+|++||++.+++++
T Consensus 223 --~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 223 --IASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred --HhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 000011122344456788899999999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-31 Score=252.62 Aligned_cols=234 Identities=24% Similarity=0.303 Sum_probs=186.5
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc-----cc----cHHHHHHHHHHHhcC-CCCceeeEEEEEEeCC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL-----HQ----GEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGR 530 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~-----~~----~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 530 (736)
+.|.-.+.||+|..+.|-++.. +.+...|+|++... .. -.+.-.+|+.||+++ .||+|+++.++++.+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 3455677899999999999884 45889999998431 11 124457899999998 5999999999999999
Q ss_pred eEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCC
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRG 594 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~ 594 (736)
..++|+|.|+.|.|.++|.+.-.+++++..+|++|+..|+.|||.+ +.++||+|||+|..+.++
T Consensus 97 F~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~G 176 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPG 176 (411)
T ss_pred hhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCc
Confidence 9999999999999999998888899999999999999999999964 458999999999988776
Q ss_pred CCcceeecccccCcccChhccc-----C-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHH
Q 041821 595 SNSSQFSQIRGTKGYMAPEWAS-----N-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKI 668 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~-----~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (736)
.. ....+||++|+|||.+. + ..|+..+|+||.|||||.|+.|.+||.... . -.+.+.+
T Consensus 177 ek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk--------Q-----mlMLR~I 240 (411)
T KOG0599|consen 177 EK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK--------Q-----MLMLRMI 240 (411)
T ss_pred hh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH--------H-----HHHHHHH
Confidence 54 66789999999999875 2 348899999999999999999999986221 0 0111222
Q ss_pred hhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 669 LYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 669 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+. -....+.-.+.+....+||.+||+.||.+|.|++|+++|
T Consensus 241 meGk---------yqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 241 MEGK---------YQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred Hhcc---------cccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 2221 011122223456678899999999999999999999876
|
|
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=267.60 Aligned_cols=233 Identities=23% Similarity=0.339 Sum_probs=180.2
Q ss_pred hhcccccCeeceeEEEEeeeCC--CcEEEEEEeCcc-----------cccHHHHHHHHHHHhc-CCCCceeeEEEEEEeC
Q 041821 464 KSFKEELGRGGSGAVYKGVLAD--GRAVAVKRLGDL-----------HQGEEVFWAEVSTIGK-IYHMNLVRMWGFCSEG 529 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~-----------~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~ 529 (736)
|.+.+.||+|+||.||+|.... ++.+|+|.+... ......+.+|+.++.+ ++||||+++++++.++
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 5677899999999999999654 688999987431 1122456788888875 7999999999999999
Q ss_pred CeEEEEEecCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhc-C----------------CCccEEcccCcc
Q 041821 530 RHRLLIYEYVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHH-D----------------EFEPKIADFGLA 588 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~-~----------------~~~~kl~DFGla 588 (736)
+..+++|||+++++|.+++.. ...+++..++.++.|++.||.|||+ . +..+||+|||++
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~ 161 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLA 161 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccce
Confidence 999999999999999988743 3368999999999999999999996 3 226899999999
Q ss_pred cccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHH
Q 041821 589 KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKI 668 (736)
Q Consensus 589 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (736)
....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||.... ........
T Consensus 162 ~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~---------~~~~~~~~---- 225 (269)
T cd08528 162 KQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN---------MLSLATKI---- 225 (269)
T ss_pred eeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC---------HHHHHHHH----
Confidence 8765433 2345568999999999998889999999999999999999999986321 01111110
Q ss_pred hhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 669 LYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 669 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
... ...+. ........+.+++.+||+.||++||++.||..+|+.
T Consensus 226 ~~~-------~~~~~----~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 226 VEA-------VYEPL----PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred hhc-------cCCcC----CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 000 00010 011234578899999999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=272.76 Aligned_cols=247 Identities=21% Similarity=0.263 Sum_probs=181.0
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
++|.+.++||+|+||.||+|+.. +++.||+|.++... .....+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56788899999999999999854 57899999986432 3345678899999999999999999999999999999999
Q ss_pred CCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
++ ++|.+++... ..+++..+..++.||++||.|||+.+ ..+||+|||++......... ..
T Consensus 86 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--~~ 162 (301)
T cd07873 86 LD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT--YS 162 (301)
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc--cc
Confidence 97 6898888654 46899999999999999999999763 36899999999765432211 23
Q ss_pred cccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 602 QIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...+++.|+|||++.+. .++.++|||||||++|||++|+.||...... ..... ...............+.
T Consensus 163 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~~ 233 (301)
T cd07873 163 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE-----EQLHF----IFRILGTPTEETWPGIL 233 (301)
T ss_pred ccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH----HHHHcCCCChhhchhhh
Confidence 34578999999998654 5889999999999999999999998643211 11111 11100000000000000
Q ss_pred ---------cCccCCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 ---------DPRLKGK----FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 ---------d~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+..... ........+.+|+.+||+.||.+|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred ccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0110000 011224467899999999999999999999985
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=267.19 Aligned_cols=236 Identities=24% Similarity=0.285 Sum_probs=186.3
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
..|++.+.||+|+||.||+|... +++.+|+|.+.... ...+.+.+|+.++++++||||+++++++.+....+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 46788899999999999999954 57889999986543 34567889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 540 EKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 540 ~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
++++|.+++... ..+++.++..++.|++.||.|||+.+ ..+||+|||++........ ....
T Consensus 83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--~~~~ 160 (262)
T cd06613 83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA--KRKS 160 (262)
T ss_pred CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhh--cccc
Confidence 999999998776 58999999999999999999999763 3689999999976544221 1234
Q ss_pred ccccCcccChhcccCC---CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 603 IRGTKGYMAPEWASNL---PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~---~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
..++..|+|||.+... .++.++||||||+++|||++|+.||...... ..... .. ....
T Consensus 161 ~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~--------~~~~~-~~----------~~~~ 221 (262)
T cd06613 161 FIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM--------RALFL-IS----------KSNF 221 (262)
T ss_pred ccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHH-HH----------hccC
Confidence 5688899999999776 7899999999999999999999998632210 00000 00 0000
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+.+ ......+..+.+++.+||+.+|.+|||+.+|+.+
T Consensus 222 ~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 222 PPPKL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred CCccc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11111 1233445678999999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=270.46 Aligned_cols=233 Identities=21% Similarity=0.269 Sum_probs=185.0
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
.+|.+.+.||+|+||.||++.. .+++.||+|.+.... ...+.+.+|+.+++.++|+||+++++++..++..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 6778889999999999999994 568999999996533 34466789999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecc
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
++++|.+++.+ ..+++.++..++.|++.||.|||+.+ ..+||+|||++......... ....
T Consensus 99 ~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~--~~~~ 175 (297)
T cd06656 99 AGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTM 175 (297)
T ss_pred CCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC--cCcc
Confidence 99999999865 35899999999999999999999763 36899999999765443221 2334
Q ss_pred cccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
.+++.|+|||.+.+..++.++|||||||++|||++|..||........ . ........
T Consensus 176 ~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~--------~---------------~~~~~~~~ 232 (297)
T cd06656 176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--------L---------------YLIATNGT 232 (297)
T ss_pred cCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh--------e---------------eeeccCCC
Confidence 688999999999988899999999999999999999999863321100 0 00000000
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.....+......+.+++.+||+.+|++||++.+|+++
T Consensus 233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 233 PELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011122344567889999999999999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=271.65 Aligned_cols=235 Identities=20% Similarity=0.274 Sum_probs=182.1
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
.+.|++.++||+|+||.||+|+.. +++.+|+|.+.... ...+.+.+|+.+++.++||||+++++.+..+...++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 356888999999999999999954 48899999986543 3456788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+++++|..++.+ ...+++..+..++.|++.||.|||+.+ ..+||+|||++........ ...
T Consensus 91 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~ 168 (292)
T cd06644 91 CPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ--RRD 168 (292)
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccccc--ccc
Confidence 999999988754 346899999999999999999999763 3689999999875433211 123
Q ss_pred cccccCcccChhccc-----CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 602 QIRGTKGYMAPEWAS-----NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
...+++.|+|||++. ...++.++|||||||++|||++|..||..... .. . . .....
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--------~~-~---~-~~~~~------ 229 (292)
T cd06644 169 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--------MR-V---L-LKIAK------ 229 (292)
T ss_pred eecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH--------HH-H---H-HHHhc------
Confidence 456889999999984 34578899999999999999999999863211 00 0 0 00000
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+.. ..+......+.+++.+||+.||++||++.+|+++
T Consensus 230 --~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 230 --SEPPTL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred --CCCccC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 001111 1122334578899999999999999999999875
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=270.14 Aligned_cols=235 Identities=23% Similarity=0.299 Sum_probs=183.8
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
.+.|++.+.||+|+||.||++... ++..+|+|.+.... ...+.+.+|+.++++++||||+++++.+..+...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 356888999999999999999954 58899999986543 3446788999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+++++|.+++... ..+++..+..++.|++.||.|||+.+ ..+||+|||++......... ..
T Consensus 84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~--~~ 161 (280)
T cd06611 84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK--RD 161 (280)
T ss_pred cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccc--cc
Confidence 9999999998764 47999999999999999999999763 36899999998765432221 23
Q ss_pred cccccCcccChhccc-----CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 602 QIRGTKGYMAPEWAS-----NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
...|++.|+|||.+. ..+++.++||||||+++|||++|+.||..... ..... .+...
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~---------~~~~~----~~~~~----- 223 (280)
T cd06611 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP---------MRVLL----KILKS----- 223 (280)
T ss_pred eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH---------HHHHH----HHhcC-----
Confidence 456899999999975 34578899999999999999999999863211 00000 11110
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+.+ ..+......+.+++.+||+.+|++||++.+|+++
T Consensus 224 ---~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 224 ---EPPTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ---CCCCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 00111 1122234568889999999999999999999987
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-30 Score=277.76 Aligned_cols=250 Identities=19% Similarity=0.230 Sum_probs=179.3
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC------
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR------ 530 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 530 (736)
...|.+.+.||+|+||.||+++. ..++.||||++... ......+.+|+.+++.++||||+++++++....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 46788899999999999999995 45899999999643 233456789999999999999999999986543
Q ss_pred eEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCC
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRG 594 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~ 594 (736)
..++||||+++ +|.+.+.. .+++..+..++.|++.||.|||+.+ ..+||+|||+++.....
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 176 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN 176 (359)
T ss_pred eeEEEEeCCCc-CHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccC
Confidence 57999999974 56666543 4788999999999999999999763 37899999999765332
Q ss_pred CCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHH-----------HHH
Q 041821 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRF-----------VRE 663 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~-----------~~~ 663 (736)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...... ...
T Consensus 177 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 248 (359)
T cd07876 177 FM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI-----DQWNKVIEQLGTPSAEFMNR 248 (359)
T ss_pred cc---CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHhcCCCcHHHHHH
Confidence 21 33457899999999999999999999999999999999999999743210 000000 000
Q ss_pred HH---HHHhhhccc----cccccccCcc---CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 664 VK---RKILYEEEA----WIEEIVDPRL---KGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 664 ~~---~~~~~~~~~----~~~~~~d~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
.. ......... ...+...... ...........+.+|+.+||+.||++|||+.|++++-
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 249 LQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred HHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 00 000000000 0000000000 0001112245688999999999999999999999873
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=277.27 Aligned_cols=236 Identities=17% Similarity=0.109 Sum_probs=177.3
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
+|++.++||+|+||.||+++.. .++.+|+|.+.+.. .....+.+|+.++..++|+||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 5778899999999999999964 47889999986422 223457889999999999999999999999999999999
Q ss_pred cCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 538 YVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 538 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|+++|+|.+++.+ ...+++..+..++.||+.||.|||+.+ ..+||+|||+++........ ..
T Consensus 82 y~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~-~~ 160 (332)
T cd05623 82 YYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV-QS 160 (332)
T ss_pred ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcc-ee
Confidence 9999999999976 357899999999999999999999763 36899999999765433221 12
Q ss_pred ecccccCcccChhccc-----CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 601 SQIRGTKGYMAPEWAS-----NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
....||+.|||||++. ...++.++|||||||++|||++|+.||..... ..... .+....
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~---------~~~~~----~i~~~~--- 224 (332)
T cd05623 161 SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL---------VETYG----KIMNHK--- 224 (332)
T ss_pred cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH---------HHHHH----HHhCCC---
Confidence 3457999999999986 34588999999999999999999999963210 00111 111000
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCC--CCCCHHHHHHH
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRS--KRPTMDSVVQS 720 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~--~RPs~~evl~~ 720 (736)
... .. ..........+.+++.+|+..+|. .|+++.++++|
T Consensus 225 -~~~---~~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 225 -ERF---QF-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred -ccc---cC-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 000 00 011122345677888888765444 46899999887
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=297.70 Aligned_cols=242 Identities=21% Similarity=0.270 Sum_probs=183.5
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
.+|++.++||+|+||.||+|+.. .++.||||++.... ...+++.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 35778899999999999999954 58999999996532 23457899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccC-----------CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCccc
Q 041821 537 EYVEKQSLDKHLFSS-----------YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAK 589 (736)
Q Consensus 537 e~~~~gsL~~~l~~~-----------~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~ 589 (736)
||+++++|.+++... ..+++..+..++.||++||+|||+.+ ..+||+|||+++
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 999999999988531 24567788999999999999999763 368999999998
Q ss_pred ccCCCCC----------------cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccc
Q 041821 590 LSQRGSN----------------SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQ 653 (736)
Q Consensus 590 ~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~ 653 (736)
....... .......+||+.|||||++.+..++.++|||||||++|||++|+.||......
T Consensus 162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~---- 237 (932)
T PRK13184 162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR---- 237 (932)
T ss_pred ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh----
Confidence 7622110 00112356999999999999999999999999999999999999998642110
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhcccc
Q 041821 654 EAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-TMDSVVQSLLECET 726 (736)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~ 726 (736)
.... ...+.++... ......+..+.+++.+|++.||++|| +++++++.|+....
T Consensus 238 -----ki~~-------------~~~i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 238 -----KISY-------------RDVILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred -----hhhh-------------hhhccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0000 0000011000 00112345678899999999999996 67777777776543
|
|
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=266.69 Aligned_cols=231 Identities=19% Similarity=0.254 Sum_probs=183.3
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+|.+.+.||+|+||.||+++. .+++.||+|++... ....+++.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 367788999999999999994 46889999998642 23345788999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 539 VEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 539 ~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
+++++|.+++.... .+++.++..++.|++.||.|||+.+ ..++|+|||++......... .
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~--~ 158 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL--A 158 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh--h
Confidence 99999999887543 5789999999999999999999763 36899999999866443221 2
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
....|++.|+|||++.+..++.++|||||||+++||++|+.||.... ........ ..+
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~---------~~~~~~~~----~~~--------- 216 (256)
T cd08218 159 RTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN---------MKNLVLKI----IRG--------- 216 (256)
T ss_pred hhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC---------HHHHHHHH----hcC---------
Confidence 23458889999999998889999999999999999999999986321 01111111 000
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ....+......+.+++.+||+.+|++||++.+|+++
T Consensus 217 --~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 217 --S-YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred --C-CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 0 011222345678899999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-30 Score=266.06 Aligned_cols=233 Identities=21% Similarity=0.235 Sum_probs=180.3
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc------ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC--CeEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH------QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG--RHRL 533 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 533 (736)
.|.+.+.||+|+||.||+|.. .++..||||.+.... ...+.+.+|+.++++++||||+++++++.+. ...+
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS 82 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence 467788999999999999995 458999999885321 2235678899999999999999999998763 4678
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
++|||+++++|.+++.....+++..+..++.|++.||.|||+.+ ..+||+|||+++........
T Consensus 83 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~ 162 (265)
T cd06652 83 IFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS 162 (265)
T ss_pred EEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccccccc
Confidence 99999999999999987777899999999999999999999763 36899999999865432111
Q ss_pred -ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 598 -SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 598 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
.......|+..|+|||.+.+..++.++|||||||++|||++|+.||.... ..... ..
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~--------~~~~~----~~---------- 220 (265)
T cd06652 163 GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE--------AMAAI----FK---------- 220 (265)
T ss_pred ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc--------hHHHH----HH----------
Confidence 11233568899999999988889999999999999999999999986321 00000 00
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..........+......+.+++.+|+. +|++||++++|+++
T Consensus 221 --~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 221 --IATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred --HhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 000011122344555678889999985 89999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=266.03 Aligned_cols=234 Identities=23% Similarity=0.285 Sum_probs=169.9
Q ss_pred cccCeeceeEEEEeeeCC---CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCC
Q 041821 468 EELGRGGSGAVYKGVLAD---GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 542 (736)
++||+|+||.||+|...+ ...+|+|.+.... .....+.+|+.+++.++||||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 369999999999997433 4578899876432 33456889999999999999999999999999999999999999
Q ss_pred CHhhhcccCC-----CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 543 SLDKHLFSSY-----FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 543 sL~~~l~~~~-----~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+|.+++.... ..++.....++.||++||+|||+.+ ..+||+|||+++............
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 160 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKD 160 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccC
Confidence 9999987543 3467888999999999999999763 368999999987543322211122
Q ss_pred cccccCcccChhcccC-------CCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 602 QIRGTKGYMAPEWASN-------LPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~-------~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
...+++.|+|||++.. ..++.++|||||||++|||++ |..||..... . . ... ......
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~------~--~-~~~---~~~~~~-- 226 (269)
T cd05042 161 CHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD------E--Q-VLK---QVVREQ-- 226 (269)
T ss_pred CCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH------H--H-HHH---HHhhcc--
Confidence 3345778999998742 357889999999999999999 6777653210 0 0 000 000000
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
...+..+.+ +......+.+++..|| .||++|||+++|++.|.
T Consensus 227 --~~~~~~~~~----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 227 --DIKLPKPQL----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred --CccCCCCcc----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 111112211 2233456677888888 59999999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-30 Score=265.04 Aligned_cols=229 Identities=20% Similarity=0.264 Sum_probs=182.6
Q ss_pred hhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
|++.+.||+|+||.||++.. .+++.+|||.+... ....+.+.+|++++++++||||+++++.+..++..++||||+
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA 81 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence 67788999999999999985 45889999998643 233567889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCCC-----------------ccEEcccCcccccCCCCCccee
Q 041821 540 EKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDEF-----------------EPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 540 ~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~~-----------------~~kl~DFGla~~~~~~~~~~~~ 600 (736)
++++|.+++... ..+++..+..++.|+++||.|||+.++ .+||+|||++........ .
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~---~ 158 (256)
T cd08220 82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK---A 158 (256)
T ss_pred CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc---c
Confidence 999999999764 358999999999999999999997632 479999999987654322 2
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
....|+..|+|||.+.+..++.++||||||+++|||++|+.||..... ........ ... .
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~---------~~~~~~~~----~~~---~---- 218 (256)
T cd08220 159 YTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL---------PALVLKIM----SGT---F---- 218 (256)
T ss_pred cccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch---------HHHHHHHH----hcC---C----
Confidence 235688999999999988899999999999999999999999863211 11111110 000 0
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+......+.+++.+||+.+|++|||+.|++++
T Consensus 219 -----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 219 -----APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred -----CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 01122234578899999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-31 Score=270.56 Aligned_cols=222 Identities=22% Similarity=0.344 Sum_probs=171.3
Q ss_pred cccCeeceeEEEEeeeCC--------CcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 468 EELGRGGSGAVYKGVLAD--------GRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+.||+|+||.||+|.... ...+|+|.+.... ...+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 479999999999998532 2348888886543 3346788999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC------------------------ccEEcccCcccccCC
Q 041821 539 VEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF------------------------EPKIADFGLAKLSQR 593 (736)
Q Consensus 539 ~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~------------------------~~kl~DFGla~~~~~ 593 (736)
+++|+|.+++.... .+++..++.++.||+.||+|||+.++ .+|++|||++.....
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~ 160 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP 160 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC
Confidence 99999999997654 68999999999999999999997643 158999999865433
Q ss_pred CCCcceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCC-CCCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGI-RLSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
.....+++.|+|||++.+ ..++.++||||||+++|||++|. .|+.... . ..... .. ..
T Consensus 161 ------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~-~-----~~~~~----~~----~~ 220 (258)
T cd05078 161 ------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALD-S-----QKKLQ----FY----ED 220 (258)
T ss_pred ------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhcc-H-----HHHHH----HH----Hc
Confidence 223457889999999986 45899999999999999999995 4443110 0 00000 00 00
Q ss_pred ccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 672 EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 672 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
....+......+.+++.+||+.||++|||+++|++.|+
T Consensus 221 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 221 -------------RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -------------cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00111122356889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=269.30 Aligned_cols=246 Identities=24% Similarity=0.252 Sum_probs=175.8
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcC---CCCceeeEEEEEEe-----CC
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKI---YHMNLVRMWGFCSE-----GR 530 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~~ 530 (736)
+|++.+.||+|+||.||+|+.. +++.||+|.++... .....+.+|+.+++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 3677889999999999999954 58899999986432 2223456777777665 69999999998865 34
Q ss_pred eEEEEEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccC
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQ 592 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~ 592 (736)
..++||||++ ++|.+++.... .+++..+..++.|++.||.|||+.+ ..+||+|||+++...
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 5799999998 58888886533 5899999999999999999999763 368999999998764
Q ss_pred CCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhc
Q 041821 593 RGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (736)
.... .....||..|+|||++.+..++.++|||||||++|||++|++||..... ............ ....
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~-----~~~~~~~~~~~~---~~~~ 228 (288)
T cd07863 160 CQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-----ADQLGKIFDLIG---LPPE 228 (288)
T ss_pred Cccc---CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCH-----HHHHHHHHHHhC---CCCh
Confidence 3322 2345689999999999988999999999999999999999999863321 111111111100 0000
Q ss_pred ccccc------ccccCccC---CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 673 EAWIE------EIVDPRLK---GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 673 ~~~~~------~~~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+.. ....+... ....+.....+.+++.+||+.||++|||+.|++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred hhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000 00000000 00112234568899999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=291.14 Aligned_cols=252 Identities=17% Similarity=0.183 Sum_probs=177.0
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCC------CceeeEEEEEEeC-CeE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH------MNLVRMWGFCSEG-RHR 532 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~~~~-~~~ 532 (736)
..+|.+.++||+|+||+||+|.. ..++.||||+++........+..|++++..++| ++|+++++++... .+.
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 46688899999999999999995 457899999997544444455667777776654 5689999988764 578
Q ss_pred EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC-CC--------------------------------c
Q 041821 533 LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-EF--------------------------------E 579 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~-~~--------------------------------~ 579 (736)
+||||++ +++|.+++.....+++..+..|+.||+.||.|||++ ++ .
T Consensus 208 ~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~ 286 (467)
T PTZ00284 208 CIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCR 286 (467)
T ss_pred EEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCce
Confidence 8999988 688999888777899999999999999999999963 32 3
Q ss_pred cEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHH
Q 041821 580 PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKR 659 (736)
Q Consensus 580 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~ 659 (736)
+||+|||++..... .....+||+.|||||++.+..++.++|||||||++|||++|+.||........ ...+..
T Consensus 287 vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~--~~~i~~ 359 (467)
T PTZ00284 287 VRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEH--LHLMEK 359 (467)
T ss_pred EEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHH
Confidence 89999998864322 13456799999999999999999999999999999999999999974321100 000000
Q ss_pred H----HHHHHHHHhhhc-ccc------ccccccCc-----cCC--CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 660 F----VREVKRKILYEE-EAW------IEEIVDPR-----LKG--KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 660 ~----~~~~~~~~~~~~-~~~------~~~~~d~~-----~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ...+........ ... +....++. ... .........+.+|+.+||+.||++|||++|+++|
T Consensus 360 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 360 TLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred HcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 0 000000000000 000 00000000 000 0001123567899999999999999999999985
|
|
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=273.32 Aligned_cols=251 Identities=19% Similarity=0.284 Sum_probs=184.4
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+|++.++||+|+||.||+|... .++.||+|++.... ...+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 5678899999999999999965 48899999986432 2345688999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+++++|..+......+++.++..++.||++||+|||+.+ ..+||+|||++......... ...
T Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~--~~~ 159 (286)
T cd07846 82 VDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV--YTD 159 (286)
T ss_pred CCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccc--cCc
Confidence 999999988776667999999999999999999999764 36899999999876543321 334
Q ss_pred ccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHH---HHh--hhccccc
Q 041821 603 IRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR---KIL--YEEEAWI 676 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~ 676 (736)
..++..|+|||++.+ ..++.++||||||+++|||++|++||..... ............. ... .......
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07846 160 YVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD-----IDQLYHIIKCLGNLIPRHQEIFQKNPLF 234 (286)
T ss_pred ccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch-----HHHHHHHHHHhCCCchhhHHHhccchHh
Confidence 568899999999875 4478899999999999999999988863221 1111111110000 000 0000000
Q ss_pred cccccCccCCC-----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGK-----FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+..+..... ..+..+..+.+++.+||+.+|++||++.+|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 235 AGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00111111100 011235678999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=267.64 Aligned_cols=235 Identities=24% Similarity=0.301 Sum_probs=182.4
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCC------eE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGR------HR 532 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~------~~ 532 (736)
..+|++.+.||+|+||.||+|... +++.+++|.+.......+.+.+|+.+++++ .|+||+++++++.... ..
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 357888999999999999999964 578999999977666667899999999999 6999999999997644 48
Q ss_pred EEEEecCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccC
Q 041821 533 LLIYEYVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQ 592 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~ 592 (736)
++||||+++++|.+++.. ...+++..+..++.|+++||.|||+.++ .+||+|||++....
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~ 164 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLD 164 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecc
Confidence 999999999999998864 2478999999999999999999997633 68999999997654
Q ss_pred CCCCcceeecccccCcccChhcccC-----CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHH
Q 041821 593 RGSNSSQFSQIRGTKGYMAPEWASN-----LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRK 667 (736)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (736)
.... ......|+..|+|||++.. ..++.++|||||||++|||++|+.||...... ... . .
T Consensus 165 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~-~----~ 229 (275)
T cd06608 165 STLG--RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM--------RAL-F----K 229 (275)
T ss_pred cchh--hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH--------HHH-H----H
Confidence 3221 1234568999999998753 34788999999999999999999998632110 000 0 0
Q ss_pred HhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 668 ILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 668 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
... ...+.+ ..+......+.+++.+||+.||++|||+.+|+++
T Consensus 230 ~~~--------~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 230 IPR--------NPPPTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred hhc--------cCCCCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 000 001111 1122345678899999999999999999999874
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=271.71 Aligned_cols=233 Identities=22% Similarity=0.328 Sum_probs=184.0
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
.+|.+.+.||.|+||.||+|.. .+++.||+|.+.... ...+.+.+|+.+++.++||||+++++++..++..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 3477888999999999999984 568999999986533 34567889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecc
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
++++|.+++... .+++.++..++.|++.||+|||+.+ ..+||+|||++......... ....
T Consensus 99 ~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~ 175 (296)
T cd06655 99 AGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK--RSTM 175 (296)
T ss_pred CCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccccc--CCCc
Confidence 999999988654 5899999999999999999999763 36899999998865443221 2335
Q ss_pred cccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
.|+..|+|||.+.+..++.++|||||||++|||++|+.||..... ..... ... ... .+.
T Consensus 176 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~--------~~~~~-~~~----~~~--------~~~ 234 (296)
T cd06655 176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP--------LRALY-LIA----TNG--------TPE 234 (296)
T ss_pred CCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHH-HHH----hcC--------Ccc
Confidence 688999999999988899999999999999999999999864321 00000 000 000 000
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+ ..+......+.+++.+||+.||++||++.+|+++
T Consensus 235 ~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 235 L--QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred c--CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0 1122234568889999999999999999999875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-30 Score=264.75 Aligned_cols=221 Identities=26% Similarity=0.399 Sum_probs=172.6
Q ss_pred cccCeeceeEEEEeeeCCCc-----------EEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 468 EELGRGGSGAVYKGVLADGR-----------AVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
+.||+|+||.||+|...+.. .+++|.+.........+.+|+.++++++||||+++++++.. ...++||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 46999999999999965432 58888876554446788999999999999999999999988 7789999
Q ss_pred ecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC-----------------------ccEEcccCcccccC
Q 041821 537 EYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF-----------------------EPKIADFGLAKLSQ 592 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~-----------------------~~kl~DFGla~~~~ 592 (736)
||+++|+|.+++.... .+++..+..++.||+.||+|||+.++ .+||+|||++....
T Consensus 80 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~ 159 (259)
T cd05037 80 EYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVL 159 (259)
T ss_pred EcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccccc
Confidence 9999999999998765 78999999999999999999997632 48999999998654
Q ss_pred CCCCcceeecccccCcccChhcccCC--CCccccceechhHHHHHHHhC-CCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 593 RGSNSSQFSQIRGTKGYMAPEWASNL--PITAKVDVYSYGVVILEMVKG-IRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~Gvvl~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
. .....++..|+|||++... .++.++||||||+++|||++| ..|+...... ..... ..
T Consensus 160 ~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~------~~~~~-------~~ 220 (259)
T cd05037 160 S------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS------EKERF-------YQ 220 (259)
T ss_pred c------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch------hHHHH-------Hh
Confidence 3 1223467789999999876 789999999999999999995 5565432110 00000 00
Q ss_pred hhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 670 YEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 670 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
. ... . +......+.+++.+||+.+|.+|||+.+|++.|+
T Consensus 221 ~-----~~~-----~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 D-----QHR-----L----PMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred c-----CCC-----C----CCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 000 0 0001167889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-30 Score=275.43 Aligned_cols=176 Identities=21% Similarity=0.229 Sum_probs=147.5
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
....|.+.+.||+|+||.||+|+.. .++.||+|..... ....|+.++++++||||+++++++......++||||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 138 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH 138 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence 3446888999999999999999954 4778999985432 234699999999999999999999999999999999
Q ss_pred CCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+. ++|.+++.. ...+++..+..|+.||+.||.|||+.++ .+||+|||+++...... ...
T Consensus 139 ~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~---~~~ 214 (357)
T PHA03209 139 YS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP---AFL 214 (357)
T ss_pred cC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCc---ccc
Confidence 95 688888765 3479999999999999999999997643 67999999997543322 133
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCC
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSN 644 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~ 644 (736)
...||+.|+|||++.+..++.++|||||||++|||+++..++.
T Consensus 215 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 215 GLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred cccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 4569999999999999999999999999999999999766553
|
|
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-30 Score=264.86 Aligned_cols=236 Identities=24% Similarity=0.306 Sum_probs=184.0
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccc---cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQ---GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+|...+.||+|+||.||+|.. .+++.||+|.++.... ..+.+.+|+.++++++|+||+++++.+...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 366788999999999999995 4688999999865433 456789999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce--e
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ--F 600 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~--~ 600 (736)
+++++|.+++.....+++..+..++.|+++||.|||+.+ ..+||+|||++........... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 160 (264)
T cd06626 81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEV 160 (264)
T ss_pred CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccc
Confidence 999999999988777899999999999999999999764 3689999999987654332211 1
Q ss_pred ecccccCcccChhcccCCC---CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 601 SQIRGTKGYMAPEWASNLP---ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~---~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
....++..|+|||++.... ++.++||||||+++|||++|+.||...... ..... .....
T Consensus 161 ~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~--------~~~~~----~~~~~------ 222 (264)
T cd06626 161 QSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE--------FQIMF----HVGAG------ 222 (264)
T ss_pred cCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch--------HHHHH----HHhcC------
Confidence 2356788999999998766 889999999999999999999998632110 00000 00000
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+.+.. .......+.+++.+||+.+|++|||+.+++.+
T Consensus 223 --~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 223 --HKPPIPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred --CCCCCCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0111110 11124567889999999999999999998764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-30 Score=271.57 Aligned_cols=178 Identities=22% Similarity=0.289 Sum_probs=143.0
Q ss_pred cccCeeceeEEEEeeeC---CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEe--CCeEEEEEecCCCC
Q 041821 468 EELGRGGSGAVYKGVLA---DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE--GRHRLLIYEYVEKQ 542 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~~g 542 (736)
.+||+|+||.||+|+.. ++..||+|.+..... ...+.+|+.++++++||||+++++++.. +...++||||+. +
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~ 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-H 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-C
Confidence 47999999999999954 357899999865432 3457789999999999999999998854 567899999987 5
Q ss_pred CHhhhccc---------CCCCCHHHHHHHHHHHHHHhhhhhcCC--------------------CccEEcccCcccccCC
Q 041821 543 SLDKHLFS---------SYFLGWKERFKVALGTAKGLAYLHHDE--------------------FEPKIADFGLAKLSQR 593 (736)
Q Consensus 543 sL~~~l~~---------~~~l~~~~~~~i~~~i~~gL~yLH~~~--------------------~~~kl~DFGla~~~~~ 593 (736)
+|.+++.. ...+++..+..++.||+.||.|||+.+ ..+||+|||+++....
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~ 164 (317)
T cd07867 85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 164 (317)
T ss_pred cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCC
Confidence 77766532 125889999999999999999999753 2589999999987654
Q ss_pred CCCc-ceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccc
Q 041821 594 GSNS-SQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVV 647 (736)
Q Consensus 594 ~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~ 647 (736)
.... .......||+.|+|||++.+. .++.++|||||||++|||++|++||....
T Consensus 165 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~ 220 (317)
T cd07867 165 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred CcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence 3221 123346789999999998764 58999999999999999999999997543
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=264.99 Aligned_cols=229 Identities=25% Similarity=0.356 Sum_probs=179.8
Q ss_pred hhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
.+|.+.+.||+|+||.||++.. .++.||+|.++... ..+.+.+|+.++++++||||+++++++... ..++||||+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~ 82 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSK 82 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCC
Confidence 5678889999999999999985 67889999986532 345788999999999999999999998765 47999999999
Q ss_pred CCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecc
Q 041821 542 QSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 542 gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
++|.+++.... .+++..+..++.|++.||.|||+.+ ..+||+|||+++...... ...
T Consensus 83 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~-----~~~ 157 (254)
T cd05083 83 GNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV-----DNS 157 (254)
T ss_pred CCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccC-----CCC
Confidence 99999987543 5899999999999999999999763 368999999997643321 122
Q ss_pred cccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
..+..|+|||.+.+..++.++||||||+++|||++ |+.||..... .... .....+
T Consensus 158 ~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---------~~~~----~~~~~~----------- 213 (254)
T cd05083 158 KLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL---------KEVK----ECVEKG----------- 213 (254)
T ss_pred CCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH---------HHHH----HHHhCC-----------
Confidence 34568999999988889999999999999999998 8888863210 1111 111100
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
.....+...+..+.+++.+||+.+|++||++++|++.|++
T Consensus 214 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 214 -YRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -CCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0111122334678899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=274.45 Aligned_cols=180 Identities=16% Similarity=0.116 Sum_probs=146.2
Q ss_pred cccccCee--ceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 466 FKEELGRG--GSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 466 ~~~~lG~G--~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
+.++||+| +|++||+++. .+++.||||+++... ...+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 56789999 7899999984 568999999996532 23355778999999999999999999999999999999999
Q ss_pred CCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc---
Q 041821 540 EKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS--- 598 (736)
Q Consensus 540 ~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~--- 598 (736)
++|+|.+++... ..+++..+..++.|++.||+|||+.+ ..++++||+.+..........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 161 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVV 161 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccccc
Confidence 999999998653 35899999999999999999999763 257899998654332211100
Q ss_pred --eeecccccCcccChhcccC--CCCccccceechhHHHHHHHhCCCCCCc
Q 041821 599 --QFSQIRGTKGYMAPEWASN--LPITAKVDVYSYGVVILEMVKGIRLSNW 645 (736)
Q Consensus 599 --~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~el~tg~~p~~~ 645 (736)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 162 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred ccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 0112346788999999876 4589999999999999999999999964
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=280.36 Aligned_cols=235 Identities=19% Similarity=0.284 Sum_probs=186.8
Q ss_pred HhhhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCc-ccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGD-LHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
.+.++++..||.|+||.||++..++ +-..|-|.+.. +....+.++-|+.||+.+.||+||+|++.|...+.++|+.||
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 3456788899999999999999654 44567788864 345567899999999999999999999999999999999999
Q ss_pred CCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|.||-++..+.. ...|.+.++..++.|++.||.|||++ ++.++|+|||.+....... ....
T Consensus 111 C~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~--qkRD 188 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR--QKRD 188 (1187)
T ss_pred cCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHH--hhhc
Confidence 999999988765 34899999999999999999999986 4478999999986543321 2245
Q ss_pred cccccCcccChhccc-----CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 602 QIRGTKGYMAPEWAS-----NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
.++||++|||||+.. +.+|+.++||||||++|.||..+.+|...... .+.+-.+ .
T Consensus 189 sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp---------MRVllKi----a------- 248 (1187)
T KOG0579|consen 189 SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP---------MRVLLKI----A------- 248 (1187)
T ss_pred cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch---------HHHHHHH----h-------
Confidence 688999999999864 67899999999999999999999999763321 1111111 1
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.--.|.+ ..|......+.+++.+||..||..||+++++++|
T Consensus 249 -KSePPTL--lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 249 -KSEPPTL--LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred -hcCCCcc--cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 1111222 1355667789999999999999999999999876
|
|
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=278.71 Aligned_cols=224 Identities=19% Similarity=0.170 Sum_probs=170.8
Q ss_pred cCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcC---CCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 470 LGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKI---YHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 470 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
||+|+||+||+|+.. +++.||||++.... .....+..|..++..+ +||||+++++.+.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999954 58999999996432 1223345677777665 699999999999999999999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
|+|..++.....+++..+..++.||++||+|||+.+ ..+||+|||+++....... ......|
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g 158 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK--TTNTFCG 158 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC--CccCccC
Confidence 999999988778999999999999999999999763 3689999999975433222 1334679
Q ss_pred cCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCcc
Q 041821 606 TKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRL 684 (736)
Q Consensus 606 t~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 684 (736)
|+.|||||++.+. .++.++|||||||++|||++|+.||..... ... ...+..+. ..+
T Consensus 159 t~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~---------~~~----~~~i~~~~---------~~~ 216 (330)
T cd05586 159 TTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT---------QQM----YRNIAFGK---------VRF 216 (330)
T ss_pred CccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH---------HHH----HHHHHcCC---------CCC
Confidence 9999999998754 489999999999999999999999863211 111 11111111 000
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCC----CHHHHHHH
Q 041821 685 KGKFNTNQAATLIGIGISCVDEDRSKRP----TMDSVVQS 720 (736)
Q Consensus 685 ~~~~~~~~~~~l~~li~~cl~~dP~~RP----s~~evl~~ 720 (736)
. .......+.+++.+||+.||++|| ++.+++++
T Consensus 217 ~---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 217 P---KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred C---CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 0 011245678899999999999998 56666654
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-30 Score=265.37 Aligned_cols=231 Identities=23% Similarity=0.281 Sum_probs=183.0
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+.|.+.+.||+|+||.||+|.. .+++.||||.+.... ...+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 4567788999999999999985 468899999986432 3345688999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+++++|.+++.. ..+++..+..++.|++.||.|||+.+ ..++|+|||++..+..... ....
T Consensus 84 ~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~~ 160 (277)
T cd06641 84 LGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--KRNT 160 (277)
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchh--hhcc
Confidence 999999999864 46899999999999999999999763 3689999999976644321 1233
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
..++..|+|||.+....++.++|||||||++|||++|..|+..... ..... .+...
T Consensus 161 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---------~~~~~----~~~~~----------- 216 (277)
T cd06641 161 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP---------MKVLF----LIPKN----------- 216 (277)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch---------HHHHH----HHhcC-----------
Confidence 4688899999999888899999999999999999999999863211 00000 00000
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.....+...+..+.+++.+||+.+|++||++.+++++
T Consensus 217 -~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 217 -NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred -CCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0111222334668889999999999999999999996
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-30 Score=277.40 Aligned_cols=249 Identities=19% Similarity=0.228 Sum_probs=179.2
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC------C
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG------R 530 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 530 (736)
..+|.+.+.||+|+||.||++.. ..++.||||++.... ...+.+.+|+.+++.++||||+++++++... .
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 95 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ 95 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence 35788889999999999999984 458899999996532 2345678899999999999999999988653 3
Q ss_pred eEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCC
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRG 594 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~ 594 (736)
..++||||++ ++|.+.+.. .+++..+..++.|+++||.|||+.+ ..+||+|||+++.....
T Consensus 96 ~~~lv~e~~~-~~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~ 172 (355)
T cd07874 96 DVYLVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172 (355)
T ss_pred eeEEEhhhhc-ccHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc
Confidence 5799999997 467666643 4889999999999999999999763 37899999999865432
Q ss_pred CCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHH-----------
Q 041821 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVRE----------- 663 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----------- 663 (736)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .........
T Consensus 173 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 244 (355)
T cd07874 173 FM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-----DQWNKVIEQLGTPCPEFMKK 244 (355)
T ss_pred cc---cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhCCCCHHHHHh
Confidence 21 33457899999999999989999999999999999999999999643210 111111000
Q ss_pred HH---HHHhhhcccc----ccccccCcc---CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 664 VK---RKILYEEEAW----IEEIVDPRL---KGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 664 ~~---~~~~~~~~~~----~~~~~d~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.. .......... ......... ...........+.+++.+||+.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred hcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00 0000000000 000000000 001112234578899999999999999999999987
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-30 Score=264.05 Aligned_cols=230 Identities=22% Similarity=0.294 Sum_probs=181.1
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEe-CCeEEEEEec
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE-GRHRLLIYEY 538 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~ 538 (736)
|++.+.||+|++|.||++... +++.||+|++.... ...+.+.+|+.++++++|+|++++++.+.. ....+++|||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 678899999999999999954 47899999986432 334568899999999999999999998764 4467899999
Q ss_pred CCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCccee
Q 041821 539 VEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 539 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~ 600 (736)
+++++|.+++... ..+++.++..++.|++.||+|||+.++ .++|+|||++........ ..
T Consensus 82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~ 159 (257)
T cd08223 82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD--MA 159 (257)
T ss_pred cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCC--cc
Confidence 9999999998753 368999999999999999999997643 689999999987643322 13
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
....|++.|+|||++.+..++.++||||||++++||++|+.||.... ...... ....+. .
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~---------~~~~~~----~~~~~~---~---- 219 (257)
T cd08223 160 STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD---------MNSLVY----RIIEGK---L---- 219 (257)
T ss_pred ccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC---------HHHHHH----HHHhcC---C----
Confidence 34568999999999999899999999999999999999999986321 011111 110110 0
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+......+.+++.+|++.||++|||+.+++++
T Consensus 220 -----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 220 -----PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred -----CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11223345678899999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=265.78 Aligned_cols=248 Identities=22% Similarity=0.214 Sum_probs=178.7
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
|.+.+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL 81 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence 567889999999999999954 58999999986432 23466889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccC---CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 540 EKQSLDKHLFSS---YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 540 ~~gsL~~~l~~~---~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
+ ++|.+++... ..+++..+..++.|+++||.|||+.+ ..+||+|||++........ ..
T Consensus 82 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--~~ 158 (285)
T cd07861 82 S-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR--VY 158 (285)
T ss_pred C-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc--cc
Confidence 7 6888887542 46899999999999999999999763 3689999999976543321 12
Q ss_pred ecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH-------HHHhh-h
Q 041821 601 SQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK-------RKILY-E 671 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~ 671 (736)
....+++.|+|||++.+. .++.++|||||||++|||++|+.||...... ........... ..... .
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd07861 159 THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI-----DQLFRIFRILGTPTEDVWPGVTSLP 233 (285)
T ss_pred cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHHHhCCCChhhhhcchhhH
Confidence 334578999999988654 5789999999999999999999998643211 11111100000 00000 0
Q ss_pred c-cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 672 E-EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 672 ~-~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ............. .........+.+++.+||+.||++|||+.+|+++
T Consensus 234 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 234 DYKNTFPKWKKGSLR-SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HHHhhccccCcchhH-HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0 0000000000000 0011134577899999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-30 Score=263.61 Aligned_cols=231 Identities=29% Similarity=0.403 Sum_probs=182.4
Q ss_pred hcccccCeeceeEEEEeeeCC-----CcEEEEEEeCcccc--cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 465 SFKEELGRGGSGAVYKGVLAD-----GRAVAVKRLGDLHQ--GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 465 ~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.+.+.||+|+||.||+++..+ +..||+|.+..... ..+.+.+|+.++..++|+||+++++++.+.+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 467889999999999999644 38899999976443 45678999999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCC--CCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcce
Q 041821 538 YVEKQSLDKHLFSSYF--LGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~--l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~ 599 (736)
|+++++|.+++..... +++..+..++.|++.||+|||+.++ .+||+|||+++.........
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~- 160 (258)
T smart00219 82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK- 160 (258)
T ss_pred ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccc-
Confidence 9999999999976553 8999999999999999999997632 68999999998766542221
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....+++.|+|||.+.+..++.++||||+|++++||++ |..||.... ...+..... ...
T Consensus 161 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~---------~~~~~~~~~----~~~------ 221 (258)
T smart00219 161 KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS---------NEEVLEYLK----KGY------ 221 (258)
T ss_pred cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC---------HHHHHHHHh----cCC------
Confidence 112337789999999988889999999999999999998 677765321 111111111 100
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
....+...+..+.+++.+|++.||++|||+.++++.|
T Consensus 222 ------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 ------RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ------CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0111222456788999999999999999999999865
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-30 Score=267.68 Aligned_cols=234 Identities=24% Similarity=0.284 Sum_probs=179.6
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEeC-----CeEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEG-----RHRLL 534 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-----~~~~l 534 (736)
..|.+.+.||+|+||.||++.. .+++.+|+|.+.........+.+|+.+++++ +||||+++++++... ...++
T Consensus 22 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~l 101 (291)
T cd06639 22 DTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWL 101 (291)
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEE
Confidence 5577888999999999999995 4588999999976555556778899999999 799999999998754 35899
Q ss_pred EEecCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCC
Q 041821 535 IYEYVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRG 594 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~ 594 (736)
||||+++++|.++++. ...+++..+..++.|++.||.|||+.+ ..+||+|||+++.....
T Consensus 102 v~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~ 181 (291)
T cd06639 102 VLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTST 181 (291)
T ss_pred EEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccc
Confidence 9999999999998753 346899999999999999999999763 36899999999865433
Q ss_pred CCcceeecccccCcccChhcccCC-----CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 595 SNSSQFSQIRGTKGYMAPEWASNL-----PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
... .....|+..|+|||.+... .++.++|||||||++|||++|+.||..... ...... +.
T Consensus 182 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~--------~~~~~~-----~~ 246 (291)
T cd06639 182 RLR--RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP--------VKTLFK-----IP 246 (291)
T ss_pred ccc--ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH--------HHHHHH-----Hh
Confidence 221 2234688999999997643 368899999999999999999999863211 000100 00
Q ss_pred hhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 670 YEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 670 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
... . +.+ ..+......+.+++.+||+.+|++||++.|++++
T Consensus 247 ~~~---~-----~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 247 RNP---P-----PTL--LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred cCC---C-----CCC--CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 000 0 011 1112234568899999999999999999999875
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-30 Score=267.68 Aligned_cols=252 Identities=21% Similarity=0.250 Sum_probs=185.9
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+|++.++||+|+||.||+|... +++.||||+++.. ....+.+.+|++++++++|+||+++++++..++..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 4778899999999999999965 5889999998653 23346789999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
++++.+..++.....+++.++..++.||++||.|||+. +..+||+|||++......... ....
T Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~-~~~~ 160 (288)
T cd07833 82 VERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPAS-PLTD 160 (288)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccc-cccC
Confidence 99888877776666799999999999999999999975 347899999999876654321 1334
Q ss_pred ccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHH-------HHHHhhhccc
Q 041821 603 IRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV-------KRKILYEEEA 674 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 674 (736)
..++..|+|||++.+. .++.++||||||+++|||++|+.||..... ........... ..........
T Consensus 161 ~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07833 161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSD-----IDQLYLIQKCLGPLPPSHQELFSSNPRF 235 (288)
T ss_pred cccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence 5688999999999887 789999999999999999999998863311 11111100000 0000000000
Q ss_pred ---cccccccCc-cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 675 ---WIEEIVDPR-LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 675 ---~~~~~~d~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+..++. .....+...+..+.+++.+||+.+|++|||+++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 000000000 0001122235788999999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=262.86 Aligned_cols=237 Identities=24% Similarity=0.321 Sum_probs=185.3
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
+|++.+.||.|+||+||+|.. .++..+|+|++.... ...+.+.+|+.+++.++|+||+++++.+..++..++|||++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 577889999999999999994 457899999986432 34567899999999999999999999999999999999999
Q ss_pred CCCCHhhhcccC---CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc--
Q 041821 540 EKQSLDKHLFSS---YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS-- 598 (736)
Q Consensus 540 ~~gsL~~~l~~~---~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~-- 598 (736)
++++|.+++... ..+++..+..++.|++.||.|||+.+ ..+||+|||++..........
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~ 161 (267)
T cd06610 82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRK 161 (267)
T ss_pred CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccccc
Confidence 999999999764 35899999999999999999999763 368999999998765543321
Q ss_pred eeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
......|+..|+|||++... .++.++|||||||++|||++|+.||...... ..+.... ..
T Consensus 162 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--------~~~~~~~----~~------- 222 (267)
T cd06610 162 VRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM--------KVLMLTL----QN------- 222 (267)
T ss_pred ccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh--------hhHHHHh----cC-------
Confidence 12345689999999998876 7899999999999999999999998633211 0011100 00
Q ss_pred ccccCccCCCC-CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 678 EIVDPRLKGKF-NTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 678 ~~~d~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+.+.... ....+..+.+++.+||+.||++||++.+|+++
T Consensus 223 --~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 223 --DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred --CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 011111111 12345678899999999999999999999875
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-30 Score=276.73 Aligned_cols=249 Identities=20% Similarity=0.235 Sum_probs=179.3
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC------C
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG------R 530 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 530 (736)
..+|.+.+.||+|+||.||++.. ..++.||||++.... ...+.+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 35688889999999999999994 458899999996532 3345678999999999999999999987643 3
Q ss_pred eEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCC
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRG 594 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~ 594 (736)
..++||||++ ++|.+.+.. .+++..+..++.|++.||.|||+++ ..+||+|||+++.....
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 179 (364)
T cd07875 103 DVYIVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179 (364)
T ss_pred eEEEEEeCCC-CCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC
Confidence 5799999997 577777643 4889999999999999999999763 36899999999865432
Q ss_pred CCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHH-----------H
Q 041821 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR-----------E 663 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~-----------~ 663 (736)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......... .
T Consensus 180 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 251 (364)
T cd07875 180 FM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-----IDQWNKVIEQLGTPCPEFMKK 251 (364)
T ss_pred Cc---ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHhcCCCCHHHHHh
Confidence 21 3345789999999999999999999999999999999999999964321 111111110 0
Q ss_pred HHHH---Hhhhcccc----ccccccCcc---CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 664 VKRK---ILYEEEAW----IEEIVDPRL---KGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 664 ~~~~---~~~~~~~~----~~~~~d~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.... ........ ......... ...........+.+++.+||+.||.+|||+.++++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred hhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 00000000 000000000 001111223578899999999999999999999987
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=271.16 Aligned_cols=246 Identities=22% Similarity=0.213 Sum_probs=178.9
Q ss_pred hhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
|.+.+.||+|+||.||+|+. .+|+.+|+|+++... .....+.+|+.++++++||||+++++++.+....++|+||+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 67788999999999999995 458999999986432 22356778999999999999999999999999999999999
Q ss_pred CCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 540 EKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 540 ~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+ ++|.+++.. ...+++..+..++.||++||.|||+.+ ..+||+|||+++....... ....
T Consensus 82 ~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~ 158 (284)
T cd07839 82 D-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR--CYSA 158 (284)
T ss_pred C-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC--CcCC
Confidence 7 578877754 457899999999999999999999763 3689999999986543322 1234
Q ss_pred ccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc---cccc
Q 041821 603 IRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA---WIEE 678 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 678 (736)
..+++.|+|||++.+. .++.++|||||||++|||++|+.|+...... ......... ........ ...+
T Consensus 159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~----~~~~~~~~~----~~~~~~~~~~~~~~~ 230 (284)
T cd07839 159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV----DDQLKRIFR----LLGTPTEESWPGVSK 230 (284)
T ss_pred CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH----HHHHHHHHH----HhCCCChHHhHHhhh
Confidence 4678999999998764 4799999999999999999999886532211 111111110 00000000 0000
Q ss_pred cccC----ccCC-----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 679 IVDP----RLKG-----KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 679 ~~d~----~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+. .... ...+.....+.+++.+||+.||.+|||+.+++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 231 LPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred cccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 0000 0000 0112234678899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-30 Score=262.84 Aligned_cols=226 Identities=21% Similarity=0.226 Sum_probs=180.1
Q ss_pred cCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 470 LGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 470 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
||.|+||.||+++.. +++.+|+|.+.... ...+.+.+|+.++++++||||+++++.+.++...++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 799999999999964 48899999986432 3346789999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccccCc
Q 041821 545 DKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGTKG 608 (736)
Q Consensus 545 ~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~ 608 (736)
.+++.+...+++..+..++.|+++||.|||+.+ ..+||+|||+++....... .....|+..
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~ 157 (262)
T cd05572 81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK---TWTFCGTPE 157 (262)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccc---cccccCCcC
Confidence 999988777999999999999999999999763 3789999999987654321 233468899
Q ss_pred ccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCC
Q 041821 609 YMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKF 688 (736)
Q Consensus 609 y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 688 (736)
|+|||.+.+..++.++|+||||+++|||++|..||.....+. .... ..+.+.......
T Consensus 158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~---------------~~~~~~~~~~~~ 215 (262)
T cd05572 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP-------MEIY---------------NDILKGNGKLEF 215 (262)
T ss_pred ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH-------HHHH---------------HHHhccCCCCCC
Confidence 999999988889999999999999999999999987432110 0000 111111111122
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 041821 689 NTNQAATLIGIGISCVDEDRSKRPT-----MDSVVQS 720 (736)
Q Consensus 689 ~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 720 (736)
+......+.+++.+||+.+|++||+ +.|++++
T Consensus 216 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 216 PNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred CcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence 2233568899999999999999999 7777663
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-30 Score=268.19 Aligned_cols=232 Identities=22% Similarity=0.283 Sum_probs=181.9
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
+|++.+.||+|+||.||+++.. .++.||+|.++.. ......+.+|+.++++++||||+++++.+...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5788899999999999999964 6899999988643 233467889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccC---CCCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEcccCcccccCCCCCcce
Q 041821 540 EKQSLDKHLFSS---YFLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 540 ~~gsL~~~l~~~---~~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~~~~~~~~~~~ 599 (736)
++++|..++... ..+++..+..++.|++.||.|||+. +..+||+|||++.......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---- 157 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL---- 157 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc----
Confidence 999999988763 2689999999999999999999963 2368999999997653322
Q ss_pred eecccccCcccChhcccCC------CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 600 FSQIRGTKGYMAPEWASNL------PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~------~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
.....+++.|+|||.+.+. .++.++|||||||++|||++|+.||..... .......
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---------~~~~~~~--------- 219 (286)
T cd06622 158 AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY---------ANIFAQL--------- 219 (286)
T ss_pred cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch---------hhHHHHH---------
Confidence 2334588899999998543 358899999999999999999999863211 0000100
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+.+.. ....+......+.+++.+||+.+|++||++.+++.+
T Consensus 220 ---~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 220 ---SAIVDGD-PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred ---HHHhhcC-CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 0111110 112233456778899999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=262.58 Aligned_cols=234 Identities=20% Similarity=0.270 Sum_probs=169.8
Q ss_pred cccCeeceeEEEEeeeCCC---cEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCC
Q 041821 468 EELGRGGSGAVYKGVLADG---RAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~---~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 542 (736)
++||+|+||.||+|+..++ ..+++|.++... ...+.+.+|+.+++.++||||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3699999999999985433 356677765432 34567899999999999999999999999999999999999999
Q ss_pred CHhhhcccC----CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 543 SLDKHLFSS----YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 543 sL~~~l~~~----~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+|.+++.+. ..+++..+..++.||++||+|||+.+ ..+||+|||++..............
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 160 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD 160 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence 999998753 24667788899999999999999763 3689999999864332221112234
Q ss_pred ccccCcccChhcccC-------CCCccccceechhHHHHHHHhC-CCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 603 IRGTKGYMAPEWASN-------LPITAKVDVYSYGVVILEMVKG-IRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~-------~~~~~~~DvwS~Gvvl~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
..++..|+|||++.. ..++.++|||||||++|||+++ ..||..... .. ....+ ..+.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~----~~~~~----~~~~-- 225 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-----RE----VLNHV----IKDQ-- 225 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-----HH----HHHHH----Hhhc--
Confidence 567899999998753 2457899999999999999975 556542210 00 11111 0111
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
...+.++.+... ....+.+++..|| .+|++||++++|++.|.
T Consensus 226 -~~~~~~~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 226 -QVKLFKPQLELP----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred -ccccCCCccCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 122233333222 2356777888999 67999999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-30 Score=268.87 Aligned_cols=227 Identities=25% Similarity=0.242 Sum_probs=183.2
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.|.+.+.||+|+||.||++... +++.+|+|.+.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 4678899999999999999954 58999999986532 234568899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|+++++|.+++.....++...+..++.|++.||.|||+.+ ..+||+|||+++..... ..
T Consensus 82 ~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-----~~ 156 (290)
T cd05580 82 YVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-----TY 156 (290)
T ss_pred cCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-----CC
Confidence 9999999999988788999999999999999999999753 36899999999876543 23
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
...|++.|+|||.+.+...+.++||||||+++|||++|+.||..... . ........+
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---------~----~~~~~~~~~---------- 213 (290)
T cd05580 157 TLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP---------I----QIYEKILEG---------- 213 (290)
T ss_pred CCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH---------H----HHHHHHhcC----------
Confidence 34688999999999888899999999999999999999999863210 0 011111000
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
. ...+......+.+++.+||+.||.+|| +++|++++
T Consensus 214 -~--~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 214 -K--VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred -C--ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 0 011222346788999999999999999 77777754
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=263.34 Aligned_cols=230 Identities=27% Similarity=0.340 Sum_probs=180.7
Q ss_pred hhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc--cccHHHHHHHHHHHhcCC---CCceeeEEEEEEeCCeEEEEEe
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIY---HMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e 537 (736)
|++.+.||+|+||.||+|.. .+++.||+|.+... ....+++.+|+.++++++ |||++++++++.++...++|||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 56778999999999999995 56899999998653 234466889999999986 9999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|+++++|.+++... .+++..+..++.|++.||.|||+.++ .++|+|||++......... ..
T Consensus 83 ~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~--~~ 159 (277)
T cd06917 83 YAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK--RS 159 (277)
T ss_pred cCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc--cc
Confidence 99999999998654 78999999999999999999997643 6899999999876544321 23
Q ss_pred cccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 602 QIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...|+..|+|||.+.+ ..++.++||||||+++|||++|..||....... ... . .....
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~---------~~~----~--------~~~~~ 218 (277)
T cd06917 160 TFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR---------AMM----L--------IPKSK 218 (277)
T ss_pred cccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh---------hhh----c--------cccCC
Confidence 4568999999999865 457899999999999999999999986321100 000 0 11111
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+.+... .....+.+++.+||+.||++||++.+++.+
T Consensus 219 ~~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 219 PPRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 1111111 134578899999999999999999999875
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=262.50 Aligned_cols=230 Identities=22% Similarity=0.270 Sum_probs=181.9
Q ss_pred hhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEe--CCeEEEEEe
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE--GRHRLLIYE 537 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e 537 (736)
|++.+.||.|+||.||++.. .+++.+|+|.+... ....+.+.+|++++++++||||+++++++.. +...+++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence 66788999999999999984 46889999998643 2334568899999999999999999998764 456799999
Q ss_pred cCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhh-----cCC----------------CccEEcccCcccccC
Q 041821 538 YVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLH-----HDE----------------FEPKIADFGLAKLSQ 592 (736)
Q Consensus 538 ~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH-----~~~----------------~~~kl~DFGla~~~~ 592 (736)
|+++++|.+++.. ...+++..+..++.||++||.||| +.+ ..+||+|||++....
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~ 161 (265)
T cd08217 82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILG 161 (265)
T ss_pred hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccccc
Confidence 9999999999865 347899999999999999999999 542 368999999998765
Q ss_pred CCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhc
Q 041821 593 RGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (736)
..... .....|++.|+|||.+.+..++.++||||||+++++|++|+.||.... ...+.. ....+
T Consensus 162 ~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---------~~~~~~----~~~~~- 225 (265)
T cd08217 162 HDSSF--AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN---------QLQLAS----KIKEG- 225 (265)
T ss_pred CCccc--ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC---------HHHHHH----HHhcC-
Confidence 43321 234568999999999998889999999999999999999999986321 011111 11110
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.....+......+.+++.+|++.+|++||++.+|+++
T Consensus 226 -----------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 226 -----------KFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -----------CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0112233445688999999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=266.32 Aligned_cols=234 Identities=25% Similarity=0.349 Sum_probs=185.9
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
..|++.+.||+|+||.||+|... ++..+|+|.+.......+.+.+|++++++++|+||+++++.+......++|+||++
T Consensus 19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 98 (286)
T cd06614 19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMD 98 (286)
T ss_pred ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccC
Confidence 44667789999999999999965 58899999997655456678899999999999999999999999999999999999
Q ss_pred CCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceeecc
Q 041821 541 KQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 541 ~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
+++|.+++.... .+++..+..++.|++.||.|||+.++ .+||+|||++........ .....
T Consensus 99 ~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~ 176 (286)
T cd06614 99 GGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS--KRNSV 176 (286)
T ss_pred CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh--hhccc
Confidence 999999998776 79999999999999999999997633 689999999876543322 12334
Q ss_pred cccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
.++..|+|||++.+..++.++||||||+++|||++|+.|+...... ... ... .... . +.
T Consensus 177 ~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~--------~~~-~~~----~~~~---~-----~~ 235 (286)
T cd06614 177 VGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL--------RAL-FLI----TTKG---I-----PP 235 (286)
T ss_pred cCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH--------HHH-HHH----HhcC---C-----CC
Confidence 5788999999998888999999999999999999999998632110 000 000 0000 0 00
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.......+..+.+++.+||+.+|.+||++.+|+++
T Consensus 236 --~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 236 --LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred --CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 01111234678899999999999999999999875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-30 Score=265.84 Aligned_cols=236 Identities=21% Similarity=0.286 Sum_probs=178.6
Q ss_pred hhcccccCeeceeEEEEeeeC----CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC------
Q 041821 464 KSFKEELGRGGSGAVYKGVLA----DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR------ 530 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 530 (736)
|.+.+.||+|+||.||+|... .++.||||++.... ...+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 356778999999999999843 36789999986532 33456889999999999999999999886543
Q ss_pred eEEEEEecCCCCCHhhhcccC------CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcc
Q 041821 531 HRLLIYEYVEKQSLDKHLFSS------YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLA 588 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~------~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla 588 (736)
..++++||+++|+|..++... ..+++.....++.|++.||+|||+++ ..+||+|||++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 247899999999998876422 15789999999999999999999763 36899999999
Q ss_pred cccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHH
Q 041821 589 KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRK 667 (736)
Q Consensus 589 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (736)
+...............+++.|++||.+....++.++||||||+++|||++ |++||..... ......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~---------~~~~~~---- 227 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN---------SEIYNY---- 227 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH---------HHHHHH----
Confidence 86644332222223345678999999998889999999999999999999 7777753210 011111
Q ss_pred HhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 668 ILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 668 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
+.... . ...+...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 228 ~~~~~--------~----~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 228 LIKGN--------R----LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHcCC--------c----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 10000 0 011122346789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=261.71 Aligned_cols=234 Identities=23% Similarity=0.263 Sum_probs=189.0
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
.+++.+.||+|++|.||+++.. +++.||||++.... ...+.+.+|+.++.+++|+||+++++++..++..++||||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 4667889999999999999965 48999999987643 34567899999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhc-CC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH-DE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~-~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
++++|.+++.....+++..+..++.|+++||.|||+ .+ ..++|+|||++......... ...
T Consensus 82 ~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~--~~~ 159 (264)
T cd06623 82 DGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ--CNT 159 (264)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc--ccc
Confidence 999999999877789999999999999999999999 63 36899999999876543332 224
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
..++..|+|||.+....++.++||||||+++|||++|+.|+...... .......... . ...
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~------~~~~~~~~~~----~--------~~~- 220 (264)
T cd06623 160 FVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP------SFFELMQAIC----D--------GPP- 220 (264)
T ss_pred eeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc------CHHHHHHHHh----c--------CCC-
Confidence 56889999999999888999999999999999999999998643210 1111111111 0 000
Q ss_pred ccCCCCCHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 683 RLKGKFNTN-QAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 683 ~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+.. .+..+.+++.+||+.+|++||++.+++++
T Consensus 221 ---~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 ---PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ---CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 111222 45688999999999999999999999985
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-30 Score=264.21 Aligned_cols=234 Identities=23% Similarity=0.306 Sum_probs=184.9
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
++++.+.||+|+||.||++... +++.+|+|++.... ...+.+.+|++++++++||||+++++.+......++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 4667789999999999999965 58899999986542 34567889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhc-CC----------------CccEEcccCcccccCCCCCcceee
Q 041821 540 EKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHH-DE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 540 ~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~-~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
++++|.+++... ..+++..+..++.|++.||+|||+ .+ ..+||+|||.+........ .
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~----~ 157 (265)
T cd06605 82 DGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA----K 157 (265)
T ss_pred CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh----h
Confidence 999999999875 678999999999999999999998 53 3689999999876543221 1
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
...++..|+|||.+.+..++.++||||||+++|||++|+.||........ ...... +.. ..
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~----~~~-----------~~ 218 (265)
T cd06605 158 TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD----GIFELL----QYI-----------VN 218 (265)
T ss_pred cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc----cHHHHH----HHH-----------hc
Confidence 25688899999999988999999999999999999999999864321111 011111 110 01
Q ss_pred CccCCCCCHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 682 PRLKGKFNTN-QAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 682 ~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.. ....+.. ....+.+++.+||..||++|||+.+++.+
T Consensus 219 ~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 219 EP-PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CC-CCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 00 0111111 45678899999999999999999999875
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-29 Score=263.26 Aligned_cols=240 Identities=23% Similarity=0.229 Sum_probs=180.5
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC--CeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG--RHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 537 (736)
+++..+.||.|++|.||++... +++.+|+|.+.... .....+.+|++++++++||||+++++++.+. ...++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 4567789999999999999964 58899999986533 3456789999999999999999999998653 46899999
Q ss_pred cCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 538 YVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 538 ~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
|+++++|.+++.. ...++...+..++.|++.||.|||+.+ ..+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-- 159 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL-- 159 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc--
Confidence 9999999987653 336889999999999999999999763 368999999987654322
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
.....++..|+|||.+.+..++.++||||||+++|||++|..||........ .. ........ ... ..
T Consensus 160 --~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~---~~~~~~~~----~~~---~~ 226 (287)
T cd06621 160 --AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL-GP---IELLSYIV----NMP---NP 226 (287)
T ss_pred --cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCC-Ch---HHHHHHHh----cCC---ch
Confidence 1234578899999999988999999999999999999999999874422100 00 11111110 000 00
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+ .... .........+.+++.+||+.+|++|||+.||+++
T Consensus 227 ~~-~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 227 EL-KDEP--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred hh-ccCC--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 00 0000 0011235678999999999999999999999985
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=266.13 Aligned_cols=232 Identities=23% Similarity=0.291 Sum_probs=184.6
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
.+|.+.+.||+|+||.||++.. .+++.||+|.+.... ...+.+.+|+.++++++||||+++++++..++..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 5678889999999999999984 467899999986433 34467889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecc
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
++++|.+++.+. .+++.++..++.|++.||.|||+.+ ..+||+|||++......... ....
T Consensus 99 ~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~--~~~~ 175 (293)
T cd06647 99 AGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTM 175 (293)
T ss_pred CCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccc--cccc
Confidence 999999998654 5889999999999999999999763 36899999998765443321 2334
Q ss_pred cccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc-ccC
Q 041821 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI-VDP 682 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~ 682 (736)
.|++.|+|||.+....++.++||||||+++|||++|+.||........ ...+ ..+
T Consensus 176 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~------------------------~~~~~~~~ 231 (293)
T cd06647 176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA------------------------LYLIATNG 231 (293)
T ss_pred cCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh------------------------eeehhcCC
Confidence 688999999999888899999999999999999999999964321100 0000 000
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......+......+.+++.+||+.+|++||++.+++.+
T Consensus 232 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 232 TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011122334578899999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=268.91 Aligned_cols=229 Identities=24% Similarity=0.269 Sum_probs=177.6
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|.+.+.||+|+||.||+|+.. +++.||+|.+.... ...+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45778889999999999999954 58999999985322 23356889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 537 EYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 537 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
||++ |+|.+++.. ...+++..+..++.|++.||.|||+.+ ..+||+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~----- 168 (307)
T cd06607 95 EYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA----- 168 (307)
T ss_pred HhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC-----
Confidence 9997 677666643 447899999999999999999999763 36899999998765432
Q ss_pred eecccccCcccChhccc---CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 600 FSQIRGTKGYMAPEWAS---NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
....+++.|+|||++. ...++.++||||||+++|||++|..||..... ....... ...
T Consensus 169 -~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~---------~~~~~~~----~~~----- 229 (307)
T cd06607 169 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---------MSALYHI----AQN----- 229 (307)
T ss_pred -CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH---------HHHHHHH----hcC-----
Confidence 2345788999999874 45688999999999999999999999863210 0000000 000
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
..+.+ ........+.+++.+||+.+|++||++.+|+.+.
T Consensus 230 ---~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 230 ---DSPTL---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred ---CCCCC---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 00111 1223456789999999999999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-30 Score=292.96 Aligned_cols=245 Identities=25% Similarity=0.313 Sum_probs=193.7
Q ss_pred HHHHHHhhhhcccccCeeceeEEEEeeeCC--------CcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEE
Q 041821 456 YAELKKSTKSFKEELGRGGSGAVYKGVLAD--------GRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWG 524 (736)
Q Consensus 456 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~ 524 (736)
..|+..+...+.+.||+|.||.|++|.... ...||||.++... ...+.+..|+++|+.+ .|+||+.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 456666666778899999999999998321 3579999997643 4457789999999999 5999999999
Q ss_pred EEEeCCeEEEEEecCCCCCHhhhcccCC----------------CCCHHHHHHHHHHHHHHhhhhhcC------------
Q 041821 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSY----------------FLGWKERFKVALGTAKGLAYLHHD------------ 576 (736)
Q Consensus 525 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~i~~gL~yLH~~------------ 576 (736)
+|......++|+||+..|+|.++|+..+ .++..+.+.++.|||+|++||++.
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNV 449 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNV 449 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhE
Confidence 9999999999999999999999998655 388999999999999999999865
Q ss_pred ----CCccEEcccCcccccCCCCCcceeecccc--cCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccC
Q 041821 577 ----EFEPKIADFGLAKLSQRGSNSSQFSQIRG--TKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVED 649 (736)
Q Consensus 577 ----~~~~kl~DFGla~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~ 649 (736)
+..+||+|||+|+......... .....| ...|||||.+....|+.|+|||||||+||||++ |..|+.....
T Consensus 450 Li~~~~~~kIaDFGlar~~~~~~~y~-~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~- 527 (609)
T KOG0200|consen 450 LITKNKVIKIADFGLARDHYNKDYYR-TKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP- 527 (609)
T ss_pred EecCCCEEEEccccceeccCCCCceE-ecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-
Confidence 3378999999999766544432 121222 456999999999999999999999999999999 5566543110
Q ss_pred CccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 650 GEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
...+ .+.+....+...|..+..++.++|+.||+.+|++||++.++++.++...
T Consensus 528 -------~~~l----------------~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 528 -------TEEL----------------LEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred -------HHHH----------------HHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 0111 1122233334456667788999999999999999999999999998853
|
|
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-30 Score=262.98 Aligned_cols=230 Identities=20% Similarity=0.303 Sum_probs=181.9
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
|.+.+.||+|+||.||++... ++..+|+|.+... ....+.+.+|+.++++++|+||+++++.+.+....++|+||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC 81 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence 567889999999999999954 5889999998643 234456789999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCCC-----------------ccEEcccCcccccCCCCCccee
Q 041821 540 EKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDEF-----------------EPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 540 ~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~~-----------------~~kl~DFGla~~~~~~~~~~~~ 600 (736)
++++|.+++.... .+++..+..++.|+++||.|||+.++ .+||+|||.+......... .
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~--~ 159 (257)
T cd08225 82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMEL--A 159 (257)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCccc--c
Confidence 9999999987543 57999999999999999999997642 4699999999876543221 2
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
....|++.|+|||++....++.++||||||++++||++|..||.... ...... . . .....
T Consensus 160 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---------~~~~~~---~-~-------~~~~~ 219 (257)
T cd08225 160 YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN---------LHQLVL---K-I-------CQGYF 219 (257)
T ss_pred cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---------HHHHHH---H-H-------hcccC
Confidence 33468999999999988889999999999999999999999986321 011111 1 0 00001
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. .........+.+++.+||+.+|++|||+.+|+++
T Consensus 220 ~-----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 220 A-----PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred C-----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1 1112234578899999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=269.01 Aligned_cols=236 Identities=23% Similarity=0.249 Sum_probs=180.7
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|...+.||+|+||.||+++. .++..||+|.+.... .....+.+|++++++++|||++++++++.+++..++||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 4466778899999999999995 458899999986432 22356889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 537 EYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 537 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
||++ |+|.+.+.. ...+++.++..++.|++.||.|||+.+ ..+||+|||++......
T Consensus 105 e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~----- 178 (317)
T cd06635 105 EYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA----- 178 (317)
T ss_pred eCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCc-----
Confidence 9997 577776654 447899999999999999999999763 36899999998754332
Q ss_pred eecccccCcccChhccc---CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 600 FSQIRGTKGYMAPEWAS---NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
....|++.|+|||++. ...++.++|||||||++|||++|+.||..... ....... ...
T Consensus 179 -~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---------~~~~~~~----~~~----- 239 (317)
T cd06635 179 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---------MSALYHI----AQN----- 239 (317)
T ss_pred -ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH---------HHHHHHH----Hhc-----
Confidence 2345889999999974 45689999999999999999999999863210 0000000 000
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
.............+.+++.+||+.+|++||++.+|++++.......
T Consensus 240 ------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 240 ------ESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred ------cCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 0000112233456889999999999999999999999876554433
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-30 Score=269.13 Aligned_cols=238 Identities=19% Similarity=0.181 Sum_probs=181.2
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.|++.+.||+|+||.||++... .++.||+|.+.... ...+.+.+|+.+++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 4677889999999999999954 47899999986532 233567899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCc----
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNS---- 597 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~---- 597 (736)
|+++++|.+++.....+++..+..++.|+++||.|||+.++ .+||+|||+++........
T Consensus 82 ~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (305)
T cd05609 82 YVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYE 161 (305)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccc
Confidence 99999999999887789999999999999999999997643 6899999998742111000
Q ss_pred ---------ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHH
Q 041821 598 ---------SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKI 668 (736)
Q Consensus 598 ---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (736)
.......|+..|+|||.+.+..++.++||||||+++|||++|..||..... ..+.. ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~---------~~~~~----~~ 228 (305)
T cd05609 162 GHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP---------EELFG----QV 228 (305)
T ss_pred cccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHH----HH
Confidence 011124578899999999888899999999999999999999999863210 01111 11
Q ss_pred hhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 669 LYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 669 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
.. .....+.. ....+..+.+++.+||+.||++||++.++.+.|+.
T Consensus 229 ~~------~~~~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 229 IS------DDIEWPEG----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred Hh------cccCCCCc----cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 00 00111111 11234567899999999999999996555555543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=267.67 Aligned_cols=249 Identities=19% Similarity=0.213 Sum_probs=181.8
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccc------cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQ------GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
|++.+.||+|+||.||+|... +++.||||.+..... ....+.+|+.++++++|+||+++++++.+.+..++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 567789999999999999954 589999999965432 2345678999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 537 EYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
||+ +++|.+++.... .+++..+..++.||++||.|||+.+ ..+||+|||+++........
T Consensus 82 e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~-- 158 (298)
T cd07841 82 EFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK-- 158 (298)
T ss_pred ccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc--
Confidence 999 899999998766 7999999999999999999999764 36899999999876543221
Q ss_pred eecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhh--ccccc
Q 041821 600 FSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYE--EEAWI 676 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 676 (736)
.....+++.|+|||.+.+ ..++.++|||||||++|||++|.++|..... .................. .....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
T cd07841 159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD-----IDQLGKIFEALGTPTEENWPGVTSL 233 (298)
T ss_pred ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc-----HHHHHHHHHHcCCCchhhhhhcccc
Confidence 233456889999998864 4578999999999999999999777653221 111111111000000000 00000
Q ss_pred cccccCccCCC-----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGK-----FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
........... ........+.+++.+||+.||++|||+.||+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 234 PDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000000001 112335678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-30 Score=274.80 Aligned_cols=246 Identities=22% Similarity=0.264 Sum_probs=176.6
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC------Ce
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG------RH 531 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 531 (736)
.+|.+.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.+|++++||||+++++++... ..
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNE 94 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCc
Confidence 5688889999999999999984 468899999996532 2335677899999999999999999988643 35
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.++++|++ +++|.+++.. ..+++..+..++.||++||.|||+.+ ..+||+|||+++.....
T Consensus 95 ~~~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~- 171 (343)
T cd07878 95 VYLVTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE- 171 (343)
T ss_pred EEEEeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC-
Confidence 68999998 7899887754 46999999999999999999999763 36899999999865432
Q ss_pred CcceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHH-------HHH
Q 041821 596 NSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV-------KRK 667 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~ 667 (736)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+.... ...
T Consensus 172 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07878 172 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY-----IDQLKRIMEVVGTPSPEVLKK 242 (343)
T ss_pred ----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHHHh
Confidence 234568999999999876 5689999999999999999999999864211 01111110000 000
Q ss_pred Hhhhc-cccccc---cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 668 ILYEE-EAWIEE---IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 668 ~~~~~-~~~~~~---~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+.... ...... .....+.. ........+.+|+.+||+.||++|||+.|+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 243 ISSEHARKYIQSLPHMPQQDLKK-IFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred cchhhHHHHhhccccccchhHHH-hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 000000 00000000 000112357899999999999999999999976
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=267.77 Aligned_cols=228 Identities=23% Similarity=0.322 Sum_probs=179.2
Q ss_pred ccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 467 KEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
...||+|+||.||++.. .+++.||+|.+.... ...+.+.+|+.+++.++||||+++++++..++..++||||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 44799999999999995 468999999986432 3456688999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccccCc
Q 041821 545 DKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGTKG 608 (736)
Q Consensus 545 ~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~ 608 (736)
..++.. ..+++..+..++.|++.||.|||+.+ ..+||+|||++........ ......|+..
T Consensus 106 ~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~ 182 (297)
T cd06659 106 TDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KRKSLVGTPY 182 (297)
T ss_pred HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc--cccceecCcc
Confidence 998754 45899999999999999999999763 3689999999976544322 1234568999
Q ss_pred ccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCC
Q 041821 609 YMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKF 688 (736)
Q Consensus 609 y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 688 (736)
|+|||++.+..++.++|||||||++|||++|+.||..... .. ..... .... .+.. ..
T Consensus 183 y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--------~~-~~~~~----~~~~--------~~~~--~~ 239 (297)
T cd06659 183 WMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP--------VQ-AMKRL----RDSP--------PPKL--KN 239 (297)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HH-HHHHH----hccC--------CCCc--cc
Confidence 9999999988899999999999999999999999863211 00 00110 0000 0000 01
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 689 NTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 689 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.......+.+++.+||+.+|++||++.+|+++
T Consensus 240 ~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 240 AHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 11223567889999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-29 Score=257.33 Aligned_cols=234 Identities=26% Similarity=0.277 Sum_probs=188.4
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC--CeEEEEEe
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG--RHRLLIYE 537 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 537 (736)
|...+.||+|++|.||+|... +++.|++|.+.... ...+.+.+|+.++++++||||+++++.+.+. ...++++|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence 456688999999999999965 68999999986544 3457789999999999999999999999988 89999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|+++++|.+++.....+++..+..++.|+++||.|||+.+ ..+||+|||.+.............
T Consensus 82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 161 (260)
T cd06606 82 YVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTG 161 (260)
T ss_pred ecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccccccc
Confidence 9999999999987778999999999999999999999763 478999999998776544311123
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
...++..|+|||.+....++.++||||||++++||++|..||..... .... ...+..
T Consensus 162 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~---------------~~~~~~ 218 (260)
T cd06606 162 SVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN--------PMAA---------------LYKIGS 218 (260)
T ss_pred CCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--------hHHH---------------HHhccc
Confidence 45688999999999888899999999999999999999999864320 0000 000111
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.......+......+.+++.+|++.||++||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 219 SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 111122333346789999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-30 Score=263.57 Aligned_cols=230 Identities=20% Similarity=0.192 Sum_probs=184.3
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
|++.+.||+|+||.||+++.. +++.||+|.+.... ...+.+.+|++++++++||||+++++++.++...++|+||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL 81 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence 677889999999999999965 58999999996432 3456789999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+.+++|.+++.....+++..+..++.|+++||.|||+.+ ..++|+|||++........ ...
T Consensus 82 ~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~---~~~ 158 (258)
T cd05578 82 LLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL---TTS 158 (258)
T ss_pred CCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCcc---ccc
Confidence 999999999987778999999999999999999999753 4789999999987654321 234
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
..|+..|+|||.+.+..++.++||||||+++|+|++|..||...... ....+.. . ...
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~----~--------~~~---- 216 (258)
T cd05578 159 TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT------IRDQIRA----K--------QET---- 216 (258)
T ss_pred cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc------HHHHHHH----H--------hcc----
Confidence 56888999999999888999999999999999999999998743211 0011110 0 000
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH--HHHHH
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTM--DSVVQ 719 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl~ 719 (736)
.....+...+..+.+++.+||+.||.+||++ +|+++
T Consensus 217 -~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 217 -ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred -ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 0112233345788899999999999999999 66553
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=268.88 Aligned_cols=234 Identities=21% Similarity=0.194 Sum_probs=182.0
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.|++.+.||+|+||.||++... +++.+|+|.+.... ...+.+.+|+++++.++||||+++++.+.++...++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 4677889999999999999965 48999999996533 234568899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc-
Q 041821 538 YVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS- 598 (736)
Q Consensus 538 ~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~- 598 (736)
|+.+++|.+++... ..+++..+..++.|+++||+|||+.+ ..++|+|||++..........
T Consensus 82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (316)
T cd05574 82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVS 161 (316)
T ss_pred ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccc
Confidence 99999999998754 36899999999999999999999763 368999999987553221100
Q ss_pred --------------------------eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCcc
Q 041821 599 --------------------------QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEG 652 (736)
Q Consensus 599 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~ 652 (736)
......||..|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~--- 238 (316)
T cd05574 162 KALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD--- 238 (316)
T ss_pred cccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH---
Confidence 112346889999999999888999999999999999999999998633210
Q ss_pred chhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC----HHHHHHH
Q 041821 653 QEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT----MDSVVQS 720 (736)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~~ 720 (736)
. .+ ..+.............+..+.+++.+||+.||++||| +.+++.+
T Consensus 239 --~---~~----------------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 239 --E---TF----------------SNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred --H---HH----------------HHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 0 00 0011111111111114568999999999999999999 7777764
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=264.72 Aligned_cols=229 Identities=25% Similarity=0.380 Sum_probs=179.8
Q ss_pred cccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCC
Q 041821 466 FKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQS 543 (736)
Q Consensus 466 ~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 543 (736)
....||+|+||.||++.. .++..||||.+.... ...+.+.+|+.++++++|+||+++++.+..++..++||||+++++
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~ 105 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA 105 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence 346799999999999985 458899999986533 344568899999999999999999999999999999999999999
Q ss_pred HhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccccC
Q 041821 544 LDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGTK 607 (736)
Q Consensus 544 L~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~ 607 (736)
|.+++... .+++.++..++.||+.||.|||+.+ ..+||+|||++......... .....|+.
T Consensus 106 L~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~--~~~~~~~~ 182 (292)
T cd06658 106 LTDIVTHT-RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKSLVGTP 182 (292)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc--CceeecCc
Confidence 99988543 5899999999999999999999763 37899999999765433221 23456899
Q ss_pred cccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCC
Q 041821 608 GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGK 687 (736)
Q Consensus 608 ~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 687 (736)
.|+|||.+.+..++.++||||||+++|||++|+.||..... . ....... ....+....
T Consensus 183 ~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--------~-~~~~~~~------------~~~~~~~~~- 240 (292)
T cd06658 183 YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP--------L-QAMRRIR------------DNLPPRVKD- 240 (292)
T ss_pred cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------H-HHHHHHH------------hcCCCcccc-
Confidence 99999999888899999999999999999999999863210 0 0011110 111111111
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 688 FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 688 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.......+.+++.+||+.||++|||+.+++++
T Consensus 241 -~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 241 -SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred -ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11234567889999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=263.18 Aligned_cols=231 Identities=24% Similarity=0.307 Sum_probs=173.6
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHH-HhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVST-IGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+|++.+.||+|+||.||+++.. +++.||+|+++... .....+..|+.+ ++.++||||+++++++..++..+++|||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 4677889999999999999954 58999999987543 234456667665 6667899999999999999999999999
Q ss_pred CCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcC-C----------------CccEEcccCcccccCCCCCc
Q 041821 539 VEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHD-E----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 539 ~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~-~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
++ ++|.+++.. ...+++..+..++.||+.||.|||++ + ..+||+|||+++.......
T Consensus 82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~- 159 (283)
T cd06617 82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA- 159 (283)
T ss_pred hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccccc-
Confidence 97 788777653 23689999999999999999999975 2 3689999999986543211
Q ss_pred ceeecccccCcccChhcccC----CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 598 SQFSQIRGTKGYMAPEWASN----LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
.....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ...+ ....
T Consensus 160 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~----~~~~----- 221 (283)
T cd06617 160 --KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-------FQQL----KQVV----- 221 (283)
T ss_pred --cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-------HHHH----HHHH-----
Confidence 223468899999998864 45788999999999999999999998532110 0111 0000
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
....+.+ .....+..+.+++.+||+.+|++||++.+|+++
T Consensus 222 ----~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 222 ----EEPSPQL---PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred ----hcCCCCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0001111 011234578899999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-29 Score=261.80 Aligned_cols=252 Identities=21% Similarity=0.258 Sum_probs=178.5
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+.|++.+.||+|+||.||+|... +++.||||.+.... .....+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 46778899999999999999954 58899999986432 2234567899999999999999999999999999999999
Q ss_pred CCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
++ ++|.+++... ..+++..+..++.|+++||.|||+.+ ..+||+|||+++........ ..
T Consensus 85 ~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--~~ 161 (291)
T cd07844 85 LD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT--YS 161 (291)
T ss_pred CC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcc--cc
Confidence 98 5999988654 36899999999999999999999764 36899999998754322211 22
Q ss_pred cccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHH-------HHHHHhhh--
Q 041821 602 QIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVRE-------VKRKILYE-- 671 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-- 671 (736)
...++..|+|||++.+ ..++.++||||||+++|||++|+.||...... .......... ........
T Consensus 162 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 162 NEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV----EDQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred ccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH----HHHHHHHHHhcCCCChhhhhhhhhccc
Confidence 2346889999999875 45899999999999999999999998643211 1111111000 00000000
Q ss_pred cccc-ccccccCccCCCC-CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 672 EEAW-IEEIVDPRLKGKF-NTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 672 ~~~~-~~~~~d~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.... ........+.... .......+.+++.+||+.+|++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 0000 0000000000000 00112567889999999999999999999864
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-29 Score=261.38 Aligned_cols=251 Identities=22% Similarity=0.241 Sum_probs=182.7
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+|.+.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 367888999999999999995 468999999986533 2346788999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+ +++|.+++... ..+++.++..++.||++||+|||+.++ .++|+|||++........ ....
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~~ 158 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-RLYS 158 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-Cccc
Confidence 9 99999998653 468999999999999999999997642 579999999987654332 1133
Q ss_pred cccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHH----HHhhh-cccc
Q 041821 602 QIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR----KILYE-EEAW 675 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~ 675 (736)
...|+..|+|||.+.+. .++.++||||+|++++||++|.++|..... ............. .+... ....
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07832 159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND-----IEQLAIVFRTLGTPNEETWPGLTSLPD 233 (286)
T ss_pred cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH-----HHHHHHHHHHcCCCChHHHhhccCcch
Confidence 45689999999998654 468999999999999999999777753211 1111111110000 00000 0000
Q ss_pred ccccccCccC----CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 676 IEEIVDPRLK----GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 676 ~~~~~d~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+..+... .....+....+.+++.+||+.+|++|||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000000 00111234788999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-29 Score=261.46 Aligned_cols=231 Identities=24% Similarity=0.325 Sum_probs=181.2
Q ss_pred hhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+...+.||+|++|.||++.. .+++.+|+|++.... ...+.+.+|+.+++.++||||+++++++..++..++++||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 33456899999999999994 468899999986433 3345688999999999999999999999999999999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
++|.+++.. ..+++.++..++.|++.||+|||+.+ ..+||+|||++......... .....|
T Consensus 101 ~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~ 177 (285)
T cd06648 101 GALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR--RKSLVG 177 (285)
T ss_pred CCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcc--cccccC
Confidence 999999877 56899999999999999999999763 36899999998765433221 233568
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
++.|+|||.+.+..++.++||||||+++|||++|+.||..... ....... .. ...+...
T Consensus 178 ~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~---------~~~~~~~----~~--------~~~~~~~ 236 (285)
T cd06648 178 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP---------LQAMKRI----RD--------NLPPKLK 236 (285)
T ss_pred CccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH---------HHHHHHH----Hh--------cCCCCCc
Confidence 9999999999888899999999999999999999999863210 0011111 00 0011111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+...+..+.+++.+||+.+|++||++.+++++
T Consensus 237 --~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 237 --NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred --ccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 111234578999999999999999999999974
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-29 Score=262.45 Aligned_cols=247 Identities=22% Similarity=0.230 Sum_probs=178.5
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
|+..+.||+|+||.||+|+.. +++.||||++.... .....+.+|++++++++||||+++++++.+++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 81 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence 567789999999999999854 58899999986432 22356889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 540 EKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 540 ~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
. ++|.+++... ..+++..+..++.|+++||+|||+.+ ..+||+|||+++........ ..
T Consensus 82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~--~~ 158 (284)
T cd07860 82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YT 158 (284)
T ss_pred c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccc--cc
Confidence 6 6898888653 46899999999999999999999763 37899999999865433221 23
Q ss_pred cccccCcccChhcccCCC-CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH----------HHHhh
Q 041821 602 QIRGTKGYMAPEWASNLP-ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK----------RKILY 670 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 670 (736)
...++..|+|||.+.+.. ++.++||||||+++|||++|+.||....+ ............ .....
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07860 159 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-----IDQLFRIFRTLGTPDEVVWPGVTSLPD 233 (284)
T ss_pred cccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHHHhCCCChhhhhhhhHHHH
Confidence 345788999999887644 68899999999999999999999864321 111111111000 00000
Q ss_pred hccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 671 EEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 671 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.... ........+. ...+.....+.+++.+||+.||++|||+++++++
T Consensus 234 ~~~~-~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 234 YKPS-FPKWARQDFS-KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHhh-cccccccCHH-HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0000 0000000000 0011223567899999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=267.88 Aligned_cols=228 Identities=21% Similarity=0.268 Sum_probs=190.4
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccc---cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQ---GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
..|.+.+.||+|.|++|.+|+. ..+..||||.+.+... ..+.+.+|+++|+.|+|||||+++.+.+....+|+|||
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~e 135 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVME 135 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEE
Confidence 4567888999999999999994 3589999999977542 23457899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|+.+|.+.+++...+.+....+..++.|+.+|++|||++ ++++||+|||++..+..+.. ..
T Consensus 136 ya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~---lq 212 (596)
T KOG0586|consen 136 YASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLM---LQ 212 (596)
T ss_pred eccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccccc---cc
Confidence 999999999999988888899999999999999999976 34799999999998875443 55
Q ss_pred cccccCcccChhcccCCCC-ccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPI-TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
..+|++.|.|||++.+..| ++++|+||+|++||-|+.|..||+... +.++-
T Consensus 213 t~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~----------------------------lk~Lr 264 (596)
T KOG0586|consen 213 TFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN----------------------------LKELR 264 (596)
T ss_pred ccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc----------------------------ccccc
Confidence 6889999999999998876 679999999999999999999998442 11111
Q ss_pred cCccCC--CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKG--KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
++.+.. ..+--...++.++++++|-.+|.+|+++++|.++
T Consensus 265 ~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 265 PRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred chheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 111111 1233345678889999999999999999999875
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-29 Score=253.99 Aligned_cols=231 Identities=25% Similarity=0.337 Sum_probs=184.6
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccc-cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQ-GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
|...+.||+|++|.||++... +++.+++|++..... ..+.+.+|+.++++++|+||+++++++......++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 566789999999999999964 688999999976543 557789999999999999999999999999999999999999
Q ss_pred CCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeeccc
Q 041821 542 QSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIR 604 (736)
Q Consensus 542 gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~ 604 (736)
++|.+++... ..+++..+..++.|++.||.|||+.+ ..+||+|||.+........ .....
T Consensus 82 ~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~ 158 (253)
T cd05122 82 GSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---RNTMV 158 (253)
T ss_pred CcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---cccee
Confidence 9999998776 57999999999999999999999753 3689999999987655432 23456
Q ss_pred ccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCcc
Q 041821 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRL 684 (736)
Q Consensus 605 gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 684 (736)
++..|+|||.+....++.++||||||++++||++|+.|+...... . ....... .. .....
T Consensus 159 ~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~-~~~~~~~----~~---~~~~~---- 218 (253)
T cd05122 159 GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM--------K-ALFKIAT----NG---PPGLR---- 218 (253)
T ss_pred cCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH--------H-HHHHHHh----cC---CCCcC----
Confidence 889999999998888999999999999999999999998633110 0 0000000 00 01110
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 685 KGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 685 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+......+.+++.+||+.||++|||+.+++++
T Consensus 219 ---~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 219 ---NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred ---cccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 011124578899999999999999999999875
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-29 Score=256.97 Aligned_cols=233 Identities=21% Similarity=0.247 Sum_probs=181.1
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc------cccHHHHHHHHHHHhcCCCCceeeEEEEEEeC--CeEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL------HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG--RHRL 533 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 533 (736)
.|.+.+.||+|+||.||+|+. .+++.||+|.+... .+....+.+|+.++++++|+||+++++++.+. ...+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS 82 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence 567888999999999999995 45899999987421 12335688999999999999999999998764 4678
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
+++||+++++|.+++.....+++..+..++.|++.||.|||+.+ ..++|+|||+++........
T Consensus 83 ~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 162 (264)
T cd06653 83 IFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMS 162 (264)
T ss_pred EEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccccccc
Confidence 99999999999999987777899999999999999999999763 36899999999865432111
Q ss_pred -ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 598 -SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 598 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
.......|+..|+|||.+.+..++.++|||||||++|||++|+.||.... ......
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~--------------- 219 (264)
T cd06653 163 GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE--------AMAAIF--------------- 219 (264)
T ss_pred CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC--------HHHHHH---------------
Confidence 11234568999999999998889999999999999999999999986321 001110
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+..........+......+.+++.+|++ +|..||++.+++.|
T Consensus 220 -~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 220 -KIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred -HHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 1111111122344455678899999999 57999999998875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-30 Score=252.30 Aligned_cols=231 Identities=22% Similarity=0.211 Sum_probs=185.7
Q ss_pred hhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
+.++|.++||+|.||+|-+++ ...++.+|+|++++.. .....-+.|-++|+..+||.+..+.-.|+..+.+++||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 456788999999999999999 5569999999997643 22234567999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
||..+|.|.-+|.+.+.+++...+-+...|+.||.|||++ ++++||+|||+++.--... ..+
T Consensus 248 eyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g--~t~ 325 (516)
T KOG0690|consen 248 EYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYG--DTT 325 (516)
T ss_pred EEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccccc--cee
Confidence 9999999999999988999999999999999999999976 5589999999998543322 246
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...+||+.|+|||++.+..|+.++|.|.+||++|||++|+.||.... ...+..-+. ..++
T Consensus 326 kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d---------h~kLFeLIl----------~ed~- 385 (516)
T KOG0690|consen 326 KTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD---------HEKLFELIL----------MEDL- 385 (516)
T ss_pred ccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc---------hhHHHHHHH----------hhhc-
Confidence 78999999999999999999999999999999999999999997431 111111110 1111
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
.+|.....+...|+...|..||.+|. .+.||.++
T Consensus 386 ------kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 386 ------KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred ------cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 23344445667788889999999995 35555543
|
|
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-29 Score=260.30 Aligned_cols=251 Identities=20% Similarity=0.192 Sum_probs=181.9
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccc---cHHHHHHHHHHHhcCCCCceeeEEEEEEeC--CeEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQ---GEEVFWAEVSTIGKIYHMNLVRMWGFCSEG--RHRLLI 535 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 535 (736)
..|++.+.||+|+||.||+|... +++.+|+|.++.... ....+.+|+.++++++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 36778889999999999999965 588999999964322 224567899999999999999999999887 889999
Q ss_pred EecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc
Q 041821 536 YEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
|||++ ++|.+++.... .+++.++..++.||+.||+|||+.+ ..+||+|||+++.......
T Consensus 85 ~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-- 161 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK-- 161 (293)
T ss_pred ehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc--
Confidence 99997 59988886544 5899999999999999999999763 3689999999987654321
Q ss_pred eeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHH-------HHHH--
Q 041821 599 QFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV-------KRKI-- 668 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~-- 668 (736)
......+++.|+|||.+.+. .++.++||||||+++|||++|..||..... ......+.... +..+
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 236 (293)
T cd07843 162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE-----IDQLNKIFKLLGTPTEKIWPGFSE 236 (293)
T ss_pred ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHhCCCchHHHHHhhc
Confidence 12334578899999998764 468999999999999999999999874321 11111111100 0000
Q ss_pred -hhhccccccccccCccCCCCCHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 669 -LYEEEAWIEEIVDPRLKGKFNTN-QAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 669 -~~~~~~~~~~~~d~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...............+...++.. ....+.+++.+||+.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 237 LPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred cchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000000001111111122222 35678899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.8e-29 Score=258.45 Aligned_cols=226 Identities=24% Similarity=0.301 Sum_probs=175.9
Q ss_pred cCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 470 LGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 470 lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
||+|+||+||++.. .+++.+|+|.+.... .....+.+|+.+|++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999984 458899999986422 2344567899999999999999999999999999999999999999
Q ss_pred hhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeeccccc
Q 041821 545 DKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGT 606 (736)
Q Consensus 545 ~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt 606 (736)
.+++.... .+++..+..++.|+++||.|||+.+ ..+||+|||++........ .....++
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~ 157 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK---IKGRAGT 157 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCc---cccccCC
Confidence 99987655 6899999999999999999999764 3689999999976543221 2345678
Q ss_pred CcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCC
Q 041821 607 KGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKG 686 (736)
Q Consensus 607 ~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 686 (736)
..|+|||.+.+..++.++||||||+++|||++|+.||........ .. .+.... . . ...
T Consensus 158 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~----~~~~~~-------~-~-----~~~ 215 (277)
T cd05577 158 PGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE-----KE----ELKRRT-------L-E-----MAV 215 (277)
T ss_pred CCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc-----HH----HHHhcc-------c-c-----ccc
Confidence 899999999888899999999999999999999999864322110 00 000000 0 0 001
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 687 KFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 687 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
..+......+.+++.+||+.||++|| ++.+++++
T Consensus 216 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 216 EYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred cCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 12223356788999999999999999 77777654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-29 Score=261.14 Aligned_cols=248 Identities=24% Similarity=0.240 Sum_probs=179.6
Q ss_pred hhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
|++.++||+|++|.||+|.. .++..||+|++.... ...+.+.+|+.++++++||||+++++++.+++..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 45678899999999999995 468999999986432 23356889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 540 EKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 540 ~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+ ++|.+++.... .+++..+..++.|+++||+|||+.+ ..+||+|||+++........ ..
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~ 157 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT--YT 157 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc--cC
Confidence 5 78999987655 6899999999999999999999763 36899999999765432211 23
Q ss_pred cccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHH-------HHhh--h
Q 041821 602 QIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR-------KILY--E 671 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--~ 671 (736)
...++..|+|||++.+. .++.++||||||+++|||++|+.||..... ............. .... .
T Consensus 158 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07835 158 HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE-----IDQLFRIFRTLGTPDEDVWPGVTSLPD 232 (283)
T ss_pred ccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCChHHhhhhhhchh
Confidence 34578899999988654 578999999999999999999999864321 1111111110000 0000 0
Q ss_pred ccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 672 EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 672 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..........+.. ..........+.+++.+||+.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 233 YKPTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhhhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000000000000 00112233578899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=257.74 Aligned_cols=245 Identities=20% Similarity=0.205 Sum_probs=177.1
Q ss_pred hhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCC-CCceeeEEEEEEeC--CeEEEEEe
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEG--RHRLLIYE 537 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e 537 (736)
|++.++||+|+||.||+|+. .+++.||+|+++... .......+|+.++.++. |+||+++++++.++ +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 45778999999999999994 458899999986532 22334567999999885 99999999999987 88999999
Q ss_pred cCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCCC---------------ccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDEF---------------EPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|++ ++|.+.+... ..+++.++..++.|++.||.|||+.++ .+||+|||+++....... ..
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~---~~ 156 (282)
T cd07831 81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPP---YT 156 (282)
T ss_pred cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcCCCeEEEecccccccccCCC---cC
Confidence 997 5888877653 478999999999999999999997643 689999999987654322 22
Q ss_pred cccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHH-------HHHHHHhhhcc
Q 041821 602 QIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR-------EVKRKILYEEE 673 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 673 (736)
...++..|+|||.+.. ..++.++|||||||++|||++|..||...... ........ .+........
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~- 230 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL-----DQIAKIHDVLGTPDAEVLKKFRKSR- 230 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH-----HHHHHHHHHcCCCCHHHHHhhcccc-
Confidence 3457899999997654 55789999999999999999999998643211 10111100 0000000000
Q ss_pred ccccccccCccCC----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKG----KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......+.... ......+..+.+++.+||+.+|++||++.+++++
T Consensus 231 --~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 231 --HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred --cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00000000000 0112345789999999999999999999999875
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.2e-29 Score=258.52 Aligned_cols=225 Identities=23% Similarity=0.219 Sum_probs=171.2
Q ss_pred ccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHh---cCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 469 ELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIG---KIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 469 ~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~---~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
.||+|+||.||++.. .+++.+|+|.+.... .....+.+|..+++ ..+||||+++++.+..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999995 458899999885432 12233445554443 3479999999999999999999999999
Q ss_pred CCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeeccc
Q 041821 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIR 604 (736)
Q Consensus 541 ~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~ 604 (736)
+++|.+++.....+++..+..++.|++.||.|||+.+ ..+||+|||++....... .....
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~ 156 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHASV 156 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC----ccCcC
Confidence 9999999987778999999999999999999999763 368999999987554322 22346
Q ss_pred ccCcccChhccc-CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 605 GTKGYMAPEWAS-NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 605 gt~~y~aPE~~~-~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
|+..|+|||.+. +..++.++|||||||++|||++|..||........ . .. ... ....+
T Consensus 157 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~---~---~~-~~~------------~~~~~-- 215 (279)
T cd05633 157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---H---EI-DRM------------TLTVN-- 215 (279)
T ss_pred CCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH---H---HH-HHH------------hhcCC--
Confidence 899999999986 45689999999999999999999999864321110 0 00 000 00001
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
...+...+..+.+++.+||+.||++|| ++.|+++|
T Consensus 216 --~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 216 --VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred --cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 112333456788999999999999999 69999887
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-29 Score=260.50 Aligned_cols=235 Identities=21% Similarity=0.288 Sum_probs=176.7
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEEEEe
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 537 (736)
+.+.+.++||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.++.++. |+||+++++++..+...+++||
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 3455667899999999999995 458999999986532 34456889999999996 9999999999999999999999
Q ss_pred cCCCCCHhhhc---c--cCCCCCHHHHHHHHHHHHHHhhhhhcC-C----------------CccEEcccCcccccCCCC
Q 041821 538 YVEKQSLDKHL---F--SSYFLGWKERFKVALGTAKGLAYLHHD-E----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 538 ~~~~gsL~~~l---~--~~~~l~~~~~~~i~~~i~~gL~yLH~~-~----------------~~~kl~DFGla~~~~~~~ 595 (736)
|+. ++|.++. . ....+++..+..++.|++.||+|||+. + ..+||+|||+++......
T Consensus 84 ~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 162 (288)
T cd06616 84 LMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI 162 (288)
T ss_pred ccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence 986 4554432 2 234689999999999999999999964 2 258999999997654332
Q ss_pred CcceeecccccCcccChhcccCC---CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNL---PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (736)
. .....|+..|+|||++... .++.++|||||||++|||++|+.||.... .......+
T Consensus 163 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----------~~~~~~~~------ 222 (288)
T cd06616 163 A---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----------SVFDQLTQ------ 222 (288)
T ss_pred c---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----------hHHHHHhh------
Confidence 2 2334588999999998766 68999999999999999999999986321 01111111
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......+.+........+..+.+++.+||+.||++|||+.+|+++
T Consensus 223 ---~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 223 ---VVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred ---hcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000011112222223345678999999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-29 Score=256.84 Aligned_cols=228 Identities=21% Similarity=0.264 Sum_probs=183.9
Q ss_pred hhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
|++.++||+|+||.||+++. .+++.+|+|.+.... .....+.+|++++++++|+||+++++++.+....++||||+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA 81 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence 66788999999999999984 468899999986532 33456788999999999999999999999999999999999
Q ss_pred CCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcce
Q 041821 540 EKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 540 ~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~ 599 (736)
++++|.+++.+ ...+++..+..++.|++.||+|||+.++ .+||+|||+++......
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~---- 157 (256)
T cd08530 82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNM---- 157 (256)
T ss_pred CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCC----
Confidence 99999998866 3468999999999999999999997643 68999999998775541
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.....++..|+|||.+.+..++.++|+||||+++|||++|+.||..... ..+... ...
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---------~~~~~~----~~~--------- 215 (256)
T cd08530 158 AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM---------QDLRYK----VQR--------- 215 (256)
T ss_pred cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHH----Hhc---------
Confidence 2234588999999999998899999999999999999999999863211 111111 100
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......+......+.+++.+|++.+|++||++.+++++
T Consensus 216 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 216 ---GKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred ---CCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11112233456779999999999999999999999875
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=258.11 Aligned_cols=249 Identities=22% Similarity=0.262 Sum_probs=180.4
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC--CeEEEEEe
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG--RHRLLIYE 537 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 537 (736)
|++.++||+|+||.||+|+.. +++.+|+|++.... .....+.+|+.++++++|+||+++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 456789999999999999965 48899999997642 2345688999999999999999999999988 88999999
Q ss_pred cCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 538 YVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 538 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|++ ++|.+++... ..+++..+..++.||++||+|||+.+ ..+||+|||++......... ..
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~-~~ 158 (287)
T cd07840 81 YMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA-DY 158 (287)
T ss_pred ccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc-cc
Confidence 997 5899888765 47999999999999999999999763 37899999999876554321 12
Q ss_pred ecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 601 SQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ............ ...........+
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~ 232 (287)
T cd07840 159 TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-----EQLEKIFELCGS-PTDENWPGVSKL 232 (287)
T ss_pred cccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCC-Cchhhccccccc
Confidence 33457889999998764 45899999999999999999999998643211 111111110000 000000000000
Q ss_pred -----ccC------ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 -----VDP------RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 -----~d~------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+ .+.......++..+.+++.+||+.+|++||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 233 PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000 00000111125678999999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=265.62 Aligned_cols=249 Identities=20% Similarity=0.246 Sum_probs=180.7
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeC------C
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG------R 530 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 530 (736)
...|...+.||+|+||.||+|+. .+++.||||.+... ....+.+.+|+.++++++||||+++++++... .
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 46688889999999999999994 46899999998643 22335677899999999999999999988643 3
Q ss_pred eEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCC
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRG 594 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~ 594 (736)
..++||||+. ++|.+.+... ++...+..++.|++.||+|||+.+ ..+||+|||+++.....
T Consensus 95 ~~~lv~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 171 (353)
T cd07850 95 DVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 171 (353)
T ss_pred cEEEEEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC
Confidence 5799999996 5888877544 889999999999999999999763 36899999999876443
Q ss_pred CCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHH-----------HH
Q 041821 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFV-----------RE 663 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~-----------~~ 663 (736)
.. .....++..|+|||.+.+..++.++|||||||++|+|++|+.||..... ........ ..
T Consensus 172 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 243 (353)
T cd07850 172 FM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH-----IDQWNKIIEQLGTPSDEFMSR 243 (353)
T ss_pred CC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHHhcCCCCHHHHHH
Confidence 22 2334688999999999999999999999999999999999999864321 00011110 00
Q ss_pred H---HHHHhhhcc----ccccccccCcc----CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 664 V---KRKILYEEE----AWIEEIVDPRL----KGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 664 ~---~~~~~~~~~----~~~~~~~d~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ......... ..+.++..... ....+......+.+++.+||+.||++|||+.|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 244 LQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 000000000 00011111100 011122345678899999999999999999999976
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.1e-29 Score=259.86 Aligned_cols=251 Identities=20% Similarity=0.229 Sum_probs=177.6
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
..|.+.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+.+++.++|+||+++++++..++..++||||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY 84 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence 4577888999999999999985 458899999986432 2334678899999999999999999999999999999999
Q ss_pred CCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+. ++|.+++.. ...+.+..+..++.|++.||.|||+.++ .+||+|||+++........ ..
T Consensus 85 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~--~~ 161 (291)
T cd07870 85 MH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQT--YS 161 (291)
T ss_pred cc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCC--CC
Confidence 96 677766654 3467889999999999999999997643 6899999999765432211 23
Q ss_pred cccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH-------HHHhhhcc
Q 041821 602 QIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK-------RKILYEEE 673 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 673 (736)
...+++.|+|||++.+. .++.++|||||||++|||++|+.||...... ...+........ ..... ..
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~ 236 (291)
T cd07870 162 SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV----FEQLEKIWTVLGVPTEDTWPGVSK-LP 236 (291)
T ss_pred CccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH----HHHHHHHHHHcCCCChhhhhhhhh-cc
Confidence 34578999999998754 5788999999999999999999998643211 111111100000 00000 00
Q ss_pred ccccccccCccCCCC-----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKF-----NTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+............. .......+.+++.+|++.||.+|||+.|++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 000000000000000 00123567889999999999999999999864
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=259.00 Aligned_cols=251 Identities=22% Similarity=0.239 Sum_probs=180.3
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC---
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR--- 530 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 530 (736)
+.....|++.+.||+|+||.||+|+.. +++.||||+++... .....+.+|++++++++||||+++++++.+..
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 345567888999999999999999964 58899999996432 23356778999999999999999999987655
Q ss_pred -------eEEEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccC
Q 041821 531 -------HRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFG 586 (736)
Q Consensus 531 -------~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFG 586 (736)
..++|+||+++ +|...+... ..+++..+..++.||+.||+|||+.+ ..+||+|||
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg 161 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFG 161 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccc
Confidence 78999999985 676666543 36899999999999999999999763 368999999
Q ss_pred cccccCCCCCcceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH
Q 041821 587 LAKLSQRGSNSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK 665 (736)
Q Consensus 587 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (736)
++.......... .....++..|+|||.+.+ ..++.++|||||||++|||++|++||..... ......+..
T Consensus 162 ~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-----~~~~~~~~~--- 232 (302)
T cd07864 162 LARLYNSEESRP-YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-----LAQLELISR--- 232 (302)
T ss_pred ccccccCCcccc-cccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHH---
Confidence 998765433211 223356788999998865 4578999999999999999999999863211 111111111
Q ss_pred HHHhhhccccccccc--------cC------ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 666 RKILYEEEAWIEEIV--------DP------RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 666 ~~~~~~~~~~~~~~~--------d~------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
............+. ++ ..... ....+..+.+++.+||+.||++||++.+|+++
T Consensus 233 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 233 -LCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred -HhCCCChhhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 10000000000000 00 00000 01124678999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=262.47 Aligned_cols=250 Identities=24% Similarity=0.238 Sum_probs=178.3
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+|++.+.||+|++|.||+|+.. +++.||+|.+.... ...+.+.+|++++++++||||+++++++.++...++||||
T Consensus 3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (294)
T PLN00009 3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEY 82 (294)
T ss_pred ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEec
Confidence 5778889999999999999954 68899999986532 2335688999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCCC-----------------ccEEcccCcccccCCCCCcce
Q 041821 539 VEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDEF-----------------EPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 539 ~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~~-----------------~~kl~DFGla~~~~~~~~~~~ 599 (736)
++ ++|.+++.... .+++..+..++.||+.||+|||++++ .+||+|||++........ .
T Consensus 83 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~--~ 159 (294)
T PLN00009 83 LD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR--T 159 (294)
T ss_pred cc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcc--c
Confidence 96 58888775543 35788888999999999999997632 579999999976543221 1
Q ss_pred eecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc--cc
Q 041821 600 FSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA--WI 676 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 676 (736)
.....+++.|+|||.+.+ ..++.++||||||+++|||++|+.||..... ..................... .+
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (294)
T PLN00009 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE-----IDELFKIFRILGTPNEETWPGVTSL 234 (294)
T ss_pred cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCChhhccccccc
Confidence 234467899999998865 4578999999999999999999999864321 111111111000000000000 00
Q ss_pred cccc--cCccCCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIV--DPRLKGK----FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~--d~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.... -+..... ..+.....+.+++.+|++.+|++||++.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 0000000 111234568899999999999999999999875
|
|
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-29 Score=257.57 Aligned_cols=229 Identities=20% Similarity=0.219 Sum_probs=178.4
Q ss_pred cCeeceeEEEEeeeCC-CcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 470 LGRGGSGAVYKGVLAD-GRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 470 lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
||+|+||.||+++... ++.+|+|.+.... ...+.+.+|++++++++||||+++++.+..++..+++|||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999654 8999999996543 2346688999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc------ceeec
Q 041821 545 DKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS------SQFSQ 602 (736)
Q Consensus 545 ~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~------~~~~~ 602 (736)
.+++.+...+++..+..++.|+++||+|||+.+ ..+||+|||++......... .....
T Consensus 81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 160 (265)
T cd05579 81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKR 160 (265)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccC
Confidence 999987778999999999999999999999763 36899999998765433211 12234
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
..++..|+|||.+.....+.++||||||+++|||++|..||..... ..... ....+.
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~---------~~~~~----~~~~~~---------- 217 (265)
T cd05579 161 IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP---------EEIFQ----NILNGK---------- 217 (265)
T ss_pred cccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH---------HHHHH----HHhcCC----------
Confidence 5678899999999888899999999999999999999999863321 00111 110000
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
.........+..+.+++.+||+.+|++|||+.++.+.|+
T Consensus 218 -~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 218 -IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 000000112567889999999999999999966555554
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=259.24 Aligned_cols=246 Identities=22% Similarity=0.212 Sum_probs=176.0
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccc---cHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCe-----E
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQ---GEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRH-----R 532 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~-----~ 532 (736)
.|++.+.||+|+||.||+|+. .+++.||||.++.... ....+.+|+.++++++ ||||+++++++...+. .
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 467788999999999999995 4589999999865322 2356788999999995 6999999999987665 8
Q ss_pred EEEEecCCCCCHhhhcccC-----CCCCHHHHHHHHHHHHHHhhhhhcCC-----------------CccEEcccCcccc
Q 041821 533 LLIYEYVEKQSLDKHLFSS-----YFLGWKERFKVALGTAKGLAYLHHDE-----------------FEPKIADFGLAKL 590 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~-----~~l~~~~~~~i~~~i~~gL~yLH~~~-----------------~~~kl~DFGla~~ 590 (736)
++||||+++ +|.+++... ..+++..+..++.||++||.|||+.+ ..+||+|||+++.
T Consensus 82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 999999985 888887542 35799999999999999999999753 3689999999986
Q ss_pred cCCCCCcceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 591 SQRGSNSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
....... .....+++.|+|||++.+ ..++.++||||||+++|||++|..||..... ......+... ..
T Consensus 161 ~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~-----~~~~~~~~~~----~~ 229 (295)
T cd07837 161 FSIPVKS--YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE-----LQQLLHIFKL----LG 229 (295)
T ss_pred cCCCccc--cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHHH----hC
Confidence 5432211 233457889999998865 4579999999999999999999999864321 1111111110 00
Q ss_pred hhcccccccc---cc----CccCC----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 670 YEEEAWIEEI---VD----PRLKG----KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 670 ~~~~~~~~~~---~d----~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.......... .+ +.... ...+.....+.+++.+||+.||++||++.|++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 230 TPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred CCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000000000 00 00000 0011234678899999999999999999999865
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-29 Score=266.17 Aligned_cols=254 Identities=21% Similarity=0.243 Sum_probs=183.1
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeC-----CeEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG-----RHRL 533 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 533 (736)
.|.+.+.||+|+||.||+++. .+++.||||.+... ......+.+|+.+++.++|+||+++++++... ...+
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 85 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY 85 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence 577788999999999999994 46899999998653 23345677899999999999999999988654 3579
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
+|+||+. ++|.+++.....+++..+..++.|++.||.|||+.+ ..+||+|||+++.......
T Consensus 86 lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~- 163 (337)
T cd07858 86 IVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGD- 163 (337)
T ss_pred EEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcc-
Confidence 9999996 789999887778999999999999999999999763 3689999999987644321
Q ss_pred ceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHH-------HHHHh
Q 041821 598 SQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV-------KRKIL 669 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 669 (736)
......++..|+|||.+.. ..++.++|||||||++|||++|+.||..... ........... .....
T Consensus 164 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07858 164 -FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY-----VHQLKLITELLGSPSEEDLGFIR 237 (337)
T ss_pred -cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh-----HHHHHHHHHHhCCCChHHhhhcC
Confidence 1234568899999998865 4689999999999999999999999864311 00011000000 00000
Q ss_pred hhc-cccc---cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hhccc
Q 041821 670 YEE-EAWI---EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS--LLECE 725 (736)
Q Consensus 670 ~~~-~~~~---~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 725 (736)
... ..+. ....++... ...+..+..+.+++.+||+.+|++|||+.+++++ +..+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 238 NEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred chhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 000 0000 000000000 0112345678999999999999999999999988 65543
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=261.07 Aligned_cols=234 Identities=25% Similarity=0.263 Sum_probs=178.7
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
...+|...+.||+|+||.||+|+.. +++.+|+|.+... ....+.+.+|+++++.++|+|++++++++......++
T Consensus 13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 92 (308)
T cd06634 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL 92 (308)
T ss_pred cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEE
Confidence 4455667788999999999999954 5789999998532 1233567889999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 535 IYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
||||+. |+|.+.+.. ...+++.++..++.|++.||.|||+.+ ..+||+|||++......
T Consensus 93 v~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--- 168 (308)
T cd06634 93 VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 168 (308)
T ss_pred EEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc---
Confidence 999997 678776643 446899999999999999999999753 36899999998765432
Q ss_pred ceeecccccCcccChhccc---CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 598 SQFSQIRGTKGYMAPEWAS---NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
....|++.|+|||.+. ...++.++|||||||++|||++|..|+...... . ... .....
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~----~~~----~~~~~--- 229 (308)
T cd06634 169 ---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----S----ALY----HIAQN--- 229 (308)
T ss_pred ---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH-----H----HHH----HHhhc---
Confidence 2345888999999975 345788999999999999999999997532100 0 000 00000
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
..+.. ........+.+++.+||+.+|++||++.+|+++..-.
T Consensus 230 -----~~~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~ 271 (308)
T cd06634 230 -----ESPAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL 271 (308)
T ss_pred -----CCCCc---CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccc
Confidence 00110 1223445688999999999999999999999875443
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=254.65 Aligned_cols=226 Identities=18% Similarity=0.145 Sum_probs=171.2
Q ss_pred cccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHH-hcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTI-GKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.||+|+||.||+|+. .+++.||||.+.... .....+..|..++ ...+|+||+++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5699999999999995 458899999986532 1123344555444 455899999999999999999999999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
++|.+++.....+++..+..++.|++.||.|||+.+ ..+||+|||+++.... .....|
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~~~~~~ 155 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------NKKFVG 155 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc------cccCCC
Confidence 999999987778999999999999999999999763 3689999999875433 223458
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
+..|+|||.+.+..++.++||||||+++|||++|..||..... ....... .... . ...
T Consensus 156 ~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---------~~~~~~~----~~~~---~------~~~ 213 (260)
T cd05611 156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP---------DAVFDNI----LSRR---I------NWP 213 (260)
T ss_pred CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH---------HHHHHHH----Hhcc---c------CCC
Confidence 8899999999888899999999999999999999999863211 1111111 0000 0 001
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
.......+..+.+++.+||+.+|++||++.++.+.|
T Consensus 214 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 214 EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 111123356788999999999999999776554443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=259.60 Aligned_cols=248 Identities=21% Similarity=0.193 Sum_probs=178.1
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC--CeEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG--RHRLLI 535 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 535 (736)
..|++.+.||+|+||.||+|.. .+++.||+|.++... .....+.+|+.++++++|+||+++++++... +..++|
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLV 86 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEE
Confidence 4678889999999999999995 458999999986432 1223467899999999999999999998765 568999
Q ss_pred EecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc
Q 041821 536 YEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
|||+. ++|.+++... ..+++.++..++.|+++||+|||+.+ ..+||+|||++.........
T Consensus 87 ~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~- 164 (309)
T cd07845 87 MEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP- 164 (309)
T ss_pred EecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCC-
Confidence 99997 5888887653 47899999999999999999999764 36899999999876543221
Q ss_pred eeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 599 QFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
.....++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ......+... ..........
T Consensus 165 -~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~-----~~~~~~~~~~----~~~~~~~~~~ 234 (309)
T cd07845 165 -MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE-----IEQLDLIIQL----LGTPNESIWP 234 (309)
T ss_pred -CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHh----cCCCChhhch
Confidence 233346788999999875 4589999999999999999999999864321 1111111110 0000000000
Q ss_pred ---------cc-ccCccCCCC---CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 678 ---------EI-VDPRLKGKF---NTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 678 ---------~~-~d~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
.. +........ .......+.+++.+||+.||++|||+.+++++-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~ 291 (309)
T cd07845 235 GFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESS 291 (309)
T ss_pred hhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 00 000000000 011245678899999999999999999999763
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=261.12 Aligned_cols=232 Identities=20% Similarity=0.251 Sum_probs=185.4
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEEEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 536 (736)
.|.+.+.||+|+||.||+++.. +++.||+|++... ....+.+.+|+.++++++ ||||+++++++.+++..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 4678889999999999999954 6899999998652 233466889999999998 999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc---
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS--- 597 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~--- 597 (736)
||+++++|.+++.....+++..+..++.|++.||.|||+.+ ..++|+|||++.........
T Consensus 82 e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~ 161 (280)
T cd05581 82 EYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESN 161 (280)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccC
Confidence 99999999999988778999999999999999999999763 36899999999866543221
Q ss_pred ---------------ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHH
Q 041821 598 ---------------SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR 662 (736)
Q Consensus 598 ---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 662 (736)
.......++..|+|||++....++.++||||||++++|+++|+.||..... ...+ .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~-~ 232 (280)
T cd05581 162 KGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE--------YLTF-Q 232 (280)
T ss_pred CCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH--------HHHH-H
Confidence 112335678999999999888899999999999999999999999873320 0000 1
Q ss_pred HHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH----HHHHHH
Q 041821 663 EVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM----DSVVQS 720 (736)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~~ 720 (736)
... . .....+...+..+.+++.+||+.+|++||++ ++++++
T Consensus 233 ~~~----~-------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 233 KIL----K-------------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHH----h-------------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 000 0 0111222335678899999999999999999 787764
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6e-29 Score=256.67 Aligned_cols=231 Identities=23% Similarity=0.265 Sum_probs=177.9
Q ss_pred hhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCcc------cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDL------HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
+|.+.++||+|+||.||+++... +..+++|.++.. ......+..|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 36788899999999999998543 455666665431 12234567899999999999999999999999999999
Q ss_pred EecCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcCCC---------------ccEEcccCcccccCCCCC
Q 041821 536 YEYVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHDEF---------------EPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------~~kl~DFGla~~~~~~~~ 596 (736)
|||+++++|..++.. ...+++..+..++.|+++||.|||+.++ .+||+|||+++.......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~ 160 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCD 160 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecCCEeecccCceeecCCCcc
Confidence 999999999988753 3468999999999999999999997643 579999999987644322
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
. .....|++.|+|||.+.+..++.++||||||+++|+|++|..||.... ...... ...
T Consensus 161 ~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~---------~~~~~~----~~~------- 218 (260)
T cd08222 161 L--ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN---------FLSVVL----RIV------- 218 (260)
T ss_pred c--ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---------HHHHHH----HHH-------
Confidence 1 234568889999999988889999999999999999999999985221 000000 000
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.... ...+......+.+++.+||+.+|++||++.+++++
T Consensus 219 -~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 219 -EGPT----PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred -cCCC----CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 0001 11233445678899999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=255.68 Aligned_cols=247 Identities=23% Similarity=0.261 Sum_probs=179.5
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
|++.++||+|++|.||+|+.. +++.||||.++... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD 81 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence 667889999999999999964 58899999986543 234567889999999999999999999999999999999998
Q ss_pred CCCHhhhcccC---CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 541 KQSLDKHLFSS---YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 541 ~gsL~~~l~~~---~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
++|.+++... ..+++..+..++.|++.||.|||+.+ ..+||+|||+++....... ...
T Consensus 82 -~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~~ 158 (284)
T cd07836 82 -KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN--TFS 158 (284)
T ss_pred -ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc--ccc
Confidence 5888887643 36899999999999999999999763 3689999999976543221 123
Q ss_pred cccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHH-------HHHHhhhcc
Q 041821 602 QIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV-------KRKILYEEE 673 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 673 (736)
...++..|+|||.+.+. .++.++||||||+++|||++|+.||..... ........... ...+.. ..
T Consensus 159 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~ 232 (284)
T cd07836 159 NEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNN-----EDQLLKIFRIMGTPTESTWPGISQ-LP 232 (284)
T ss_pred cccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc-----HHHHHHHHHHhCCCChhhHHHHhc-Cc
Confidence 34578899999988654 578999999999999999999999864321 11111111110 000000 00
Q ss_pred ccc---cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWI---EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~---~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+. ....+... ....+..+..+.+++.+|++.||.+||++.+|+++
T Consensus 233 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 233 EYKPTFPRYPPQDL-QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred hhcccccCCChHHH-HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000 00000000 00112234678899999999999999999999864
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=251.56 Aligned_cols=230 Identities=24% Similarity=0.322 Sum_probs=185.3
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
|.+.+.||+|++|.||+++.. +++.||+|.+.... ...+.+.+|++++++++|||++++++++.+++..+++|||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA 81 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence 567889999999999999854 57899999997654 34467899999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecc
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
++++|.+++.....+++..+..++.|++.||.|||+.+ ..+||+|||++......... ....
T Consensus 82 ~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~--~~~~ 159 (254)
T cd06627 82 ENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD--DASV 159 (254)
T ss_pred CCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc--cccc
Confidence 99999999987778999999999999999999999764 36899999999876554321 2345
Q ss_pred cccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
.++..|+|||...+..++.++||||+|+++|||++|+.|+..... ...... ....
T Consensus 160 ~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~--------~~~~~~-----~~~~------------ 214 (254)
T cd06627 160 VGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP--------MAALFR-----IVQD------------ 214 (254)
T ss_pred ccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH--------HHHHHH-----Hhcc------------
Confidence 688999999999887889999999999999999999999863210 000000 0000
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.....+......+.+++.+||+.+|++|||+.+++.+
T Consensus 215 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 215 DHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 0011222335678899999999999999999999854
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=259.45 Aligned_cols=256 Identities=18% Similarity=0.200 Sum_probs=178.4
Q ss_pred hhcccccCeeceeEEEEeeeC---CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC--CeEEE
Q 041821 464 KSFKEELGRGGSGAVYKGVLA---DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG--RHRLL 534 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 534 (736)
|.+.++||+|+||.||+|... .++.||+|.+.... ...+.+.+|+.++++++||||+++++++.+. ...++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 667889999999999999954 47899999997632 2335678899999999999999999999988 88999
Q ss_pred EEecCCCCCHhhhcccC-----CCCCHHHHHHHHHHHHHHhhhhhcC--------------------CCccEEcccCccc
Q 041821 535 IYEYVEKQSLDKHLFSS-----YFLGWKERFKVALGTAKGLAYLHHD--------------------EFEPKIADFGLAK 589 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~-----~~l~~~~~~~i~~~i~~gL~yLH~~--------------------~~~~kl~DFGla~ 589 (736)
||||+++ +|.+++... ..+++..+..++.|++.||.|||+. +..+||+|||+++
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~ 160 (316)
T cd07842 82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR 160 (316)
T ss_pred EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence 9999974 666655321 2688999999999999999999965 3468999999998
Q ss_pred ccCCCCC-cceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHH
Q 041821 590 LSQRGSN-SSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRK 667 (736)
Q Consensus 590 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (736)
....... ........++..|+|||.+.+ ..++.++||||||++++||++|++||................-...+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (316)
T cd07842 161 LFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEV 240 (316)
T ss_pred ccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHH
Confidence 7644322 112234568899999998876 45899999999999999999999999754332210000000000011000
Q ss_pred Hhhhccc---------cccccccCccCCCCC---------H--HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 668 ILYEEEA---------WIEEIVDPRLKGKFN---------T--NQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 668 ~~~~~~~---------~~~~~~d~~~~~~~~---------~--~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+...... ......+.......+ . .....+.+++.+||+.||++|||+.|++++
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 241 LGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred hCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000000 000000000000011 0 233568899999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=252.29 Aligned_cols=230 Identities=21% Similarity=0.303 Sum_probs=184.5
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
|.+.+.||+|+||.||++... +++.+|+|++.... ...+.+.+|+++++.++|||++++++.+..+...++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA 81 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence 567789999999999999954 58899999996543 34567889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccC----CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 540 EKQSLDKHLFSS----YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 540 ~~gsL~~~l~~~----~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
++++|.+++... ..+++..+..++.+++.||.|||+.+ ..+||+|||++........ .
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~--~ 159 (258)
T cd08215 82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD--L 159 (258)
T ss_pred CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcc--e
Confidence 999999998763 57999999999999999999999763 4789999999987655431 1
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.....|++.|+|||.+.+..++.++||||+|+++++|++|+.||.... ........ ... .
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~---------~~~~~~~~----~~~-------~ 219 (258)
T cd08215 160 AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN---------LLELALKI----LKG-------Q 219 (258)
T ss_pred ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc---------HHHHHHHH----hcC-------C
Confidence 233568899999999988889999999999999999999999986321 01111110 000 0
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
....+......+.+++.+||+.+|++|||+.+++++
T Consensus 220 -----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 220 -----YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 011122334678899999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.8e-29 Score=278.77 Aligned_cols=258 Identities=14% Similarity=0.128 Sum_probs=172.1
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCC--CcEEEEE------------------EeCcccccHHHHHHHHHHHhcCCCC
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD--GRAVAVK------------------RLGDLHQGEEVFWAEVSTIGKIYHM 517 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~E~~~l~~l~h~ 517 (736)
+.....|.+.++||+|+||+||++..+. +...++| .+.........+.+|+.+|++++||
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence 3345679999999999999999987432 2222222 2222223345678999999999999
Q ss_pred ceeeEEEEEEeCCeEEEEEecCCCCCHhhhcccCC-----CCCHHHHHHHHHHHHHHhhhhhcCC---------------
Q 041821 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-----FLGWKERFKVALGTAKGLAYLHHDE--------------- 577 (736)
Q Consensus 518 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----~l~~~~~~~i~~~i~~gL~yLH~~~--------------- 577 (736)
|||++++++...+..++|+|++. ++|.+++.... .....++..|+.||+.||.|||+.+
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNC 302 (501)
T ss_pred CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence 99999999999999999999985 67777664322 2345677889999999999999763
Q ss_pred -CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhH
Q 041821 578 -FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAE 656 (736)
Q Consensus 578 -~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~ 656 (736)
..+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||++|..++....... ....
T Consensus 303 ~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~--~~~~ 379 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGK--PGKQ 379 (501)
T ss_pred CCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCC--HHHH
Confidence 36899999999876543322 1234679999999999999999999999999999999999875443221110 0111
Q ss_pred HHHHHHHHH---HHHhhhccccccccccC-cc---CCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 657 LKRFVREVK---RKILYEEEAWIEEIVDP-RL---KGKFN-----TNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 657 ~~~~~~~~~---~~~~~~~~~~~~~~~d~-~~---~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+........ ..+.... ..+.+.++. .+ ....+ ......+.+++.+||+.||++|||+.|++++
T Consensus 380 ~~~~~~~~~~~~~~~p~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 380 LLKIIDSLSVCDEEFPDPP-CKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHHHhcccChhhcCCcH-HHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 111111000 0000000 000000000 00 00000 0122457788999999999999999999986
|
|
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=258.56 Aligned_cols=252 Identities=21% Similarity=0.229 Sum_probs=176.4
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC-------
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR------- 530 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 530 (736)
.+|++.++||+|+||.||+|+. .+++.||||.+.... .....+.+|+.++++++||||+++++++....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 3588889999999999999995 458999999985422 22345678999999999999999999987654
Q ss_pred -eEEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccC
Q 041821 531 -HRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQ 592 (736)
Q Consensus 531 -~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~ 592 (736)
..++||||+. ++|.+.+.... .+++.++..++.||+.||.|||+++ ..+||+|||++....
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 170 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFS 170 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence 4599999997 57887776543 6899999999999999999999764 368999999998664
Q ss_pred CCCCc--ceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 593 RGSNS--SQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 593 ~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
..... .......++..|+|||.+.+. .++.++||||||+++|||++|+.||...... ..............
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~------~~~~~~~~~~~~~~ 244 (310)
T cd07865 171 LSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ------HQLTLISQLCGSIT 244 (310)
T ss_pred CCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCCC
Confidence 43221 112334678899999988764 4789999999999999999999998643211 11111111110000
Q ss_pred hhc----c--ccccccccCc-cCCC-----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 670 YEE----E--AWIEEIVDPR-LKGK-----FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 670 ~~~----~--~~~~~~~d~~-~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
... . .....+..+. .... .+......+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000 0 0000000000 0000 000123467789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=252.31 Aligned_cols=226 Identities=18% Similarity=0.174 Sum_probs=171.3
Q ss_pred hhhccccc--CeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEec
Q 041821 463 TKSFKEEL--GRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 463 ~~~~~~~l--G~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
.+.+.+.+ |+|+||.||+++. .++..+|+|.+........ |+.....+ +||||+++++.+...+..++||||
T Consensus 15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~ 90 (267)
T PHA03390 15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDY 90 (267)
T ss_pred hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEc
Confidence 44555554 9999999999994 4588899999865332211 22222222 799999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-----------------ccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-----------------EPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-----------------~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+++++|.+++.....+++.++..++.|+++||.|||+.++ .++|+|||+++..... .
T Consensus 91 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~------~ 164 (267)
T PHA03390 91 IKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP------S 164 (267)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC------c
Confidence 9999999999887789999999999999999999997643 6899999999765432 2
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
...|+..|+|||++.+..++.++||||||+++|||++|+.||....... ..... ..... .
T Consensus 165 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~----~~~~~----~~~~~------------~ 224 (267)
T PHA03390 165 CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE----LDLES----LLKRQ------------Q 224 (267)
T ss_pred cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch----hhHHH----HHHhh------------c
Confidence 2358899999999998889999999999999999999999987332111 00011 11100 0
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHH
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPT-MDSVVQS 720 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~ 720 (736)
. ...........+.+++.+||+.+|.+||+ +++++++
T Consensus 225 ~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 225 K--KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred c--cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 0 00112234567899999999999999996 6888864
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-30 Score=258.13 Aligned_cols=228 Identities=23% Similarity=0.244 Sum_probs=184.9
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 531 (736)
-|...+++|..+||+|+||.|.+|..+ ..+.+|||++++.- ...+--+.|-++|+.. +-|.+++++.+++.-+.
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR 424 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence 567788999999999999999999854 46789999998743 2233446787888776 57899999999999999
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~ 595 (736)
+|.||||+.+|+|.-++++-+.+.+..+.-++.+||-||-|||++++ ++||+|||+++.---+.
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~ 504 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDG 504 (683)
T ss_pred eeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCC
Confidence 99999999999999999988889999999999999999999998744 78999999998543332
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
. .+.+.+||+.|+|||++...+|+..+|.|||||+||||+.|++||+...++ +.+
T Consensus 505 ~--TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~-----elF------------------ 559 (683)
T KOG0696|consen 505 V--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED-----ELF------------------ 559 (683)
T ss_pred c--ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH-----HHH------------------
Confidence 2 366789999999999999999999999999999999999999999854321 111
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT 713 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 713 (736)
..+.+.. ..+|...+.+..++....+...|.+|.-
T Consensus 560 -~aI~ehn--vsyPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 560 -QAIMEHN--VSYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred -HHHHHcc--CcCcccccHHHHHHHHHHhhcCCccccC
Confidence 1111211 2345555667777888889999999953
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=256.08 Aligned_cols=246 Identities=22% Similarity=0.243 Sum_probs=179.1
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccc--cHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEEEEecC
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQ--GEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
|.+.+.||+|+||.||+|+.. +++.||||++..... ......+|+..+++++ |+||+++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 457789999999999999965 478999999865432 2334567999999999 999999999999999999999999
Q ss_pred CCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 540 EKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 540 ~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+|+|.+++.... .+++..+..++.|++.+|.|||+.+ ..++|+|||++........ ..
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~ 156 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP---YT 156 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC---cC
Confidence 789999887654 7899999999999999999999764 4789999999986654322 23
Q ss_pred cccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHH--------HHHHHhhhc
Q 041821 602 QIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVRE--------VKRKILYEE 672 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 672 (736)
...++..|+|||++.+ ..++.++||||||++++||++|+.||....... ........ .........
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 157 DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-----QLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred CCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-----HHHHHHHhcCCCChhhhhhHhhhhc
Confidence 3568889999998854 457899999999999999999999986432111 01000000 000000000
Q ss_pred cccccccccCccC---CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 673 EAWIEEIVDPRLK---GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 673 ~~~~~~~~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.....+..... ..........+.+++.+||+.||++|||+.|++.+
T Consensus 232 --~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 232 --KLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred --cccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00000000000 00011124678999999999999999999999865
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-28 Score=258.41 Aligned_cols=226 Identities=25% Similarity=0.275 Sum_probs=173.3
Q ss_pred hhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+...++||+|+||.||+|+. .+++.||+|.+.... ...+.+.+|+.+++.++|||++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 45567899999999999995 458899999986422 2235678899999999999999999999999999999999
Q ss_pred CCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+. ++|.+++.. ...+++.++..++.||+.||.|||+.+ ..+||+|||++..... ..
T Consensus 103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~------~~ 175 (313)
T cd06633 103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP------AN 175 (313)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC------CC
Confidence 96 577777654 347899999999999999999999764 3689999999864322 22
Q ss_pred cccccCcccChhccc---CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 602 QIRGTKGYMAPEWAS---NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
...|+..|+|||++. ...++.++|||||||++|||++|..|+...... . ...... ... .
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~-----~----~~~~~~----~~~---~-- 237 (313)
T cd06633 176 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----S----ALYHIA----QND---S-- 237 (313)
T ss_pred CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-----H----HHHHHH----hcC---C--
Confidence 456889999999984 456889999999999999999999998633110 0 000000 000 0
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+.. ........+.+++.+||+.+|.+||++.+++.+
T Consensus 238 ---~~~---~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 238 ---PTL---QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ---CCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 110 111223468889999999999999999999975
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=255.93 Aligned_cols=245 Identities=23% Similarity=0.265 Sum_probs=177.5
Q ss_pred hhcccccCeeceeEEEEeeeCC-CcEEEEEEeCcccc---cHHHHHHHHHHHhcC---CCCceeeEEEEEEeCCe-----
Q 041821 464 KSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQ---GEEVFWAEVSTIGKI---YHMNLVRMWGFCSEGRH----- 531 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 531 (736)
|++.+.||+|+||.||+|+... ++.+|+|+++.... ....+.+|+.+++++ .||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 4567899999999999999654 89999999964321 234566788777665 59999999999988776
Q ss_pred EEEEEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQR 593 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~ 593 (736)
.+++|||++ ++|.+++.... .+++..+..++.|+++||.|||+.+ ..+||+|||++.....
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~ 159 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSF 159 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccC
Confidence 899999997 58988886543 5899999999999999999999764 3689999999987644
Q ss_pred CCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
... .....++..|+|||++.+..++.++|||||||++|||++|.+||..... ......+...... ....
T Consensus 160 ~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~---~~~~ 228 (287)
T cd07838 160 EMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-----ADQLDKIFDVIGL---PSEE 228 (287)
T ss_pred Ccc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-----HHHHHHHHHHcCC---CChH
Confidence 322 2334578899999999998999999999999999999999988864321 1111111111100 0000
Q ss_pred ccccc------cccCccC---CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEE------IVDPRLK---GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~------~~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+... ....... ....+.....+.+++.+||+.||++||++.+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 229 EWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred hcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 00000 0000000 11112335678899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-28 Score=260.88 Aligned_cols=253 Identities=20% Similarity=0.283 Sum_probs=180.6
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc---cccHHHHHHHHHHHhcC-CCCceeeEEEEEEeC--CeEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL---HQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEG--RHRL 533 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~~ 533 (736)
...|.+.+.||+|+||.||+|... +++.+|||++... ......+.+|+.+++++ +||||+++++++... ...+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 456888899999999999999964 5889999988542 22335577899999999 999999999998653 4689
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
+||||++ ++|..++... .+++..+..++.||+.||.|||+.+ ..+||+|||+++........
T Consensus 86 lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~ 163 (337)
T cd07852 86 LVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN 163 (337)
T ss_pred EEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccccc
Confidence 9999997 6999988765 7899999999999999999999763 36899999999866543321
Q ss_pred ---ceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHH-------HH
Q 041821 598 ---SQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV-------KR 666 (736)
Q Consensus 598 ---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~ 666 (736)
.......|+..|+|||.+.+ ..++.++||||||+++|||++|+.||...... .......... ..
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07852 164 PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTL-----NQLEKIIEVIGPPSAEDIE 238 (337)
T ss_pred ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCCCCHHHHH
Confidence 12334568999999998765 45789999999999999999999998643211 1111110000 00
Q ss_pred HHhhhc-cccccccccCccC--CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 667 KILYEE-EAWIEEIVDPRLK--GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 667 ~~~~~~-~~~~~~~~d~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+.... ...+..+...... .......+..+.+++.+||+.||++|||+.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 239 SIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000000 0000000000000 00111135678999999999999999999999976
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=263.94 Aligned_cols=256 Identities=19% Similarity=0.242 Sum_probs=180.4
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC-----eEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR-----HRL 533 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 533 (736)
.+|.+.++||+|+||.||+|+. .+++.||||.+... ......+.+|+.++++++||||+++++++.... ..+
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 84 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY 84 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence 4678889999999999999984 46899999998642 233456788999999999999999999876543 579
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
+|+||+. ++|..++.. ..+++..+..++.|++.||.|||+.+ ..+||+|||+++........
T Consensus 85 lv~e~~~-~~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 162 (336)
T cd07849 85 IVQELME-TDLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH 162 (336)
T ss_pred EEehhcc-cCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccc
Confidence 9999997 588887754 46899999999999999999999764 36899999999865433221
Q ss_pred c-eeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHH-------HHHH
Q 041821 598 S-QFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV-------KRKI 668 (736)
Q Consensus 598 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 668 (736)
. ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ........... ...+
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 237 (336)
T cd07849 163 TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY-----LHQLNLILGVLGTPSQEDLNCI 237 (336)
T ss_pred cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHcCCCCHHHHHHh
Confidence 1 1233568999999998754 5689999999999999999999999863211 00000000000 0000
Q ss_pred hhhc-cccccccccCccCCC---CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hhccc
Q 041821 669 LYEE-EAWIEEIVDPRLKGK---FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS--LLECE 725 (736)
Q Consensus 669 ~~~~-~~~~~~~~d~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 725 (736)
.... ..+... ........ ..+.....+.+++.+||+.||++|||+.+++++ ++...
T Consensus 238 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 238 ISLRARNYIKS-LPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred hchhhhhHHhh-cCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 0000 000000 00000000 011224578899999999999999999999998 55543
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=264.20 Aligned_cols=251 Identities=19% Similarity=0.238 Sum_probs=182.2
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEe----CCeEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE----GRHRL 533 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 533 (736)
..|.+.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.+|++++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 5677888999999999999994 458999999986532 334567789999999999999999998763 45689
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
+||||+. ++|.+++.....+++..+..++.||++||.|||+.+ ..+||+|||+++........
T Consensus 85 lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 163 (334)
T cd07855 85 VVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE 163 (334)
T ss_pred EEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcC
Confidence 9999996 699999987778999999999999999999999764 36899999999765443221
Q ss_pred c--eeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHH-------HHHH
Q 041821 598 S--QFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVRE-------VKRK 667 (736)
Q Consensus 598 ~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~ 667 (736)
. ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...... .....+... ....
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~-----~~~~~~~~~~g~~~~~~~~~ 238 (334)
T cd07855 164 HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV-----HQLKLILSVLGSPSEEVLNR 238 (334)
T ss_pred CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH-----HHHHHHHHHhCCChhHhhhh
Confidence 1 1234578999999999865 45899999999999999999999999643210 001000000 0000
Q ss_pred HhhhccccccccccC-ccCCCC-----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 668 ILYEEEAWIEEIVDP-RLKGKF-----NTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 668 ~~~~~~~~~~~~~d~-~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
..... +.+..+. ...... ....+..+.+++.+||+.+|++|||+++++.+-
T Consensus 239 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 295 (334)
T cd07855 239 IGSDR---VRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP 295 (334)
T ss_pred hchhh---HHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence 00000 0000000 000011 122356799999999999999999999999863
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=255.77 Aligned_cols=245 Identities=20% Similarity=0.235 Sum_probs=181.9
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccc---cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQ---GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
|++.+.||+|++|.||++... +++.+|+|++..... ....+.+|++++++++|+||+++++++..++..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 456778999999999999954 688999999865432 3467889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 540 EKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 540 ~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
++ +|.+++... ..+++..+..++.|+++||.|||+.+ ..+||+|||.+........ ....
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~--~~~~ 157 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR--PYTH 157 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc--cccC
Confidence 74 888887664 47899999999999999999999763 4789999999987755431 1233
Q ss_pred ccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 603 IRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
..++..|+|||.+.+. .++.++||||||+++|+|++|+.||..... ......... ..............+
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-----~~~~~~~~~----~~~~~~~~~~~~~~~ 228 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE-----IDQLFKIFR----TLGTPDPEVWPKFTS 228 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHH----HcCCCchHhcccchh
Confidence 4578899999998776 789999999999999999999998864321 111111111 000000000000000
Q ss_pred ---------Ccc----CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 682 ---------PRL----KGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 682 ---------~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+.. .....+.....+.+++.+||+.||.+||++.+++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 000 001122345789999999999999999999999875
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-28 Score=254.30 Aligned_cols=228 Identities=25% Similarity=0.353 Sum_probs=178.6
Q ss_pred ccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 467 KEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
..+||+|+||.||++.. .+++.||||++.... .....+.+|+.+++.++|+||+++++++..++..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 46799999999999985 468999999986433 3456688999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccccCc
Q 041821 545 DKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGTKG 608 (736)
Q Consensus 545 ~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~ 608 (736)
.+++.. ..+++..+..++.|++.||+|||+.+ ..++|+|||++......... .....|++.
T Consensus 105 ~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~ 181 (292)
T cd06657 105 TDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKSLVGTPY 181 (292)
T ss_pred HHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccccc--ccccccCcc
Confidence 998754 35899999999999999999999764 36899999998765433221 233568899
Q ss_pred ccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCC
Q 041821 609 YMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKF 688 (736)
Q Consensus 609 y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 688 (736)
|+|||.+.+..++.++||||||+++|||++|..||..... ......... ...+.+. .
T Consensus 182 y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~---------~~~~~~~~~------------~~~~~~~--~ 238 (292)
T cd06657 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---------LKAMKMIRD------------NLPPKLK--N 238 (292)
T ss_pred ccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHHh------------hCCcccC--C
Confidence 9999999888899999999999999999999999863211 001111110 0111110 0
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 689 NTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 689 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.......+.+++.+||+.+|.+||++.+|+++
T Consensus 239 ~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 239 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred cccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 11224467889999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=255.91 Aligned_cols=237 Identities=22% Similarity=0.203 Sum_probs=181.2
Q ss_pred hhcccccCeeceeEEEEeee----CCCcEEEEEEeCccc-----ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEE
Q 041821 464 KSFKEELGRGGSGAVYKGVL----ADGRAVAVKRLGDLH-----QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 533 (736)
|.+.+.||+|+||.||+++. .+++.||||.++... ...+.+.+|+.++.++ +||||+++++.+..+...+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 56788999999999999984 346889999986432 2335678999999999 5999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
+||||+++++|.+++.....+++..+..++.|+++||.|||+.+ ..+||+|||+++........
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 161 (288)
T cd05583 82 LILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEE 161 (288)
T ss_pred EEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccccc
Confidence 99999999999999987777999999999999999999999753 36899999999865443221
Q ss_pred ceeecccccCcccChhcccCCC--CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNLP--ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
......|+..|+|||.+.+.. .+.++||||||+++|||++|..||....... ....+.. ....
T Consensus 162 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-----~~~~~~~----~~~~----- 226 (288)
T cd05583 162 -RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN-----SQSEISR----RILK----- 226 (288)
T ss_pred -ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc-----hHHHHHH----HHHc-----
Confidence 123356889999999987655 7889999999999999999999986321110 0011111 1000
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
. .+ ..+......+.+++.+||+.||++|||+.++.+.|+.
T Consensus 227 --~--~~----~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 227 --S--KP----PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred --c--CC----CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 0 01 1122234567889999999999999998887766654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-28 Score=252.84 Aligned_cols=225 Identities=21% Similarity=0.216 Sum_probs=171.2
Q ss_pred ccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHH---HHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 469 ELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVS---TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 469 ~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~---~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
.||+|+||.||+++. .+++.||+|.+.... .....+..|.. .++...||||+++++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999985 458899999985432 22223444443 4445679999999999999999999999999
Q ss_pred CCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceeeccc
Q 041821 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFSQIR 604 (736)
Q Consensus 541 ~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~~~~ 604 (736)
+++|..++.....+++..+..++.|+++||.|||+. +..+||+|||++....... .....
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~----~~~~~ 156 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHASV 156 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC----CcCcC
Confidence 999999998777899999999999999999999965 3368999999987554322 22346
Q ss_pred ccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 605 GTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 605 gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
|+..|+|||.+.+. .++.++|||||||++|||++|+.||........ .. ..... ....+
T Consensus 157 ~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~------~~----~~~~~---------~~~~~- 216 (278)
T cd05606 157 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK------HE----IDRMT---------LTMAV- 216 (278)
T ss_pred CCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch------HH----HHHHh---------hccCC-
Confidence 89999999998754 689999999999999999999999874321110 00 00000 00111
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
..+...+..+.+++.+|++.+|.+|| ++.+++++
T Consensus 217 ---~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 217 ---ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred ---CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 11222356788999999999999999 99999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=254.84 Aligned_cols=262 Identities=19% Similarity=0.230 Sum_probs=198.1
Q ss_pred cccccHHHHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCC-C-C----ceeeEE
Q 041821 451 FRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-H-M----NLVRMW 523 (736)
Q Consensus 451 ~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h-~----niv~l~ 523 (736)
.-.+...|....+|.+.+.+|+|.||.|-++... .+..||||+++......+..+-|+++|.+|. + | -+|++.
T Consensus 78 H~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~ 157 (415)
T KOG0671|consen 78 HYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMR 157 (415)
T ss_pred eEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeee
Confidence 3456677888899999999999999999999843 4789999999888777788889999999994 2 2 378888
Q ss_pred EEEEeCCeEEEEEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC------------------------
Q 041821 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE------------------------ 577 (736)
Q Consensus 524 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~------------------------ 577 (736)
++|.-.++.+||+|.+ |-|+.++|..+. +++...+..|+.|++++++|||+..
T Consensus 158 ~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~ 236 (415)
T KOG0671|consen 158 DWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNP 236 (415)
T ss_pred hhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEecc
Confidence 9999999999999998 569999998866 7889999999999999999999641
Q ss_pred ------------CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCc
Q 041821 578 ------------FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNW 645 (736)
Q Consensus 578 ------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~ 645 (736)
..+||+|||.|....... ..++.|..|+|||++.+..++.++||||+||||+|+.+|...|+.
T Consensus 237 k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqt 311 (415)
T KOG0671|consen 237 KKKVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQT 311 (415)
T ss_pred CCccceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceeccc
Confidence 257999999998765443 457789999999999999999999999999999999999999985
Q ss_pred cccCCccchhHHHH----HHHHHHHHH-----hh-hccccc--------cccccCc--c--CCCCCHHHHHHHHHHHHHc
Q 041821 646 VVEDGEGQEAELKR----FVREVKRKI-----LY-EEEAWI--------EEIVDPR--L--KGKFNTNQAATLIGIGISC 703 (736)
Q Consensus 646 ~~~~~~~~~~~~~~----~~~~~~~~~-----~~-~~~~~~--------~~~~d~~--~--~~~~~~~~~~~l~~li~~c 703 (736)
....+. ..-+.. ++..+..+. .. +.-.|- ..+.++- + .......+...|++|+.+|
T Consensus 312 Hen~EH--LaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~m 389 (415)
T KOG0671|consen 312 HENLEH--LAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRM 389 (415)
T ss_pred CCcHHH--HHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHH
Confidence 532110 011111 111111111 00 000000 0000000 0 0112345567899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 041821 704 VDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 704 l~~dP~~RPs~~evl~~ 720 (736)
|..||.+|+|+.|+++|
T Consensus 390 L~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 390 LEFDPARRITLREALSH 406 (415)
T ss_pred HccCccccccHHHHhcC
Confidence 99999999999999876
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-28 Score=260.04 Aligned_cols=245 Identities=23% Similarity=0.233 Sum_probs=177.6
Q ss_pred cccccCeeceeEEEEeeeC-CCcEEEEEEeCccccc---------------HHHHHHHHHHHhcCCCCceeeEEEEEEeC
Q 041821 466 FKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQG---------------EEVFWAEVSTIGKIYHMNLVRMWGFCSEG 529 (736)
Q Consensus 466 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---------------~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 529 (736)
+.+.||+|+||.||+|... .++.||||.+...... ...+.+|++++++++|+||+++++++...
T Consensus 13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 92 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG 92 (335)
T ss_pred hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence 4567999999999999954 5899999998543211 12467899999999999999999999999
Q ss_pred CeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCC
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQR 593 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~ 593 (736)
+..++||||+. ++|.+++.....+++.....++.|++.||.|||+.++ .+||+|||+++....
T Consensus 93 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~ 171 (335)
T PTZ00024 93 DFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGY 171 (335)
T ss_pred CcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeeccc
Confidence 99999999997 7999999877789999999999999999999997643 689999999986651
Q ss_pred CC------------CcceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHH
Q 041821 594 GS------------NSSQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRF 660 (736)
Q Consensus 594 ~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~ 660 (736)
.. .........++..|+|||.+.+. .++.++|||||||++|||++|..||..... ......+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-----~~~~~~i 246 (335)
T PTZ00024 172 PPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE-----IDQLGRI 246 (335)
T ss_pred ccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH
Confidence 11 01112234568899999998764 478999999999999999999999864321 1111111
Q ss_pred HHHHHHHHhhhcc-ccccc-----------cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 661 VREVKRKILYEEE-AWIEE-----------IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 661 ~~~~~~~~~~~~~-~~~~~-----------~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
.. ....... .+... ...+... .........+.+++.+||+.+|++|||+.|++.+-
T Consensus 247 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~ 314 (335)
T PTZ00024 247 FE----LLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE 314 (335)
T ss_pred HH----HhCCCchhhCcchhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence 11 0000000 00000 0000000 00112245788999999999999999999999753
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-28 Score=255.39 Aligned_cols=234 Identities=22% Similarity=0.194 Sum_probs=179.9
Q ss_pred hhcccccCeeceeEEEEeee----CCCcEEEEEEeCccc-----ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEE
Q 041821 464 KSFKEELGRGGSGAVYKGVL----ADGRAVAVKRLGDLH-----QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 533 (736)
|++.+.||+|+||.||+++. .+++.||+|++.... ...+.+.+|++++.++ +|+||+++++++..+...+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 56778999999999999985 368899999986422 2335678899999999 5999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
+||||+++++|.+++.....+++..+..++.|+++||.|||+.+ ..+||+|||+++........
T Consensus 82 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (290)
T cd05613 82 LILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVE 161 (290)
T ss_pred EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccccccc
Confidence 99999999999999987778999999999999999999999763 37899999999866443221
Q ss_pred ceeecccccCcccChhcccCC--CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNL--PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
......|+..|+|||.+... .++.++||||||+++|||++|..||....... ....+.... ...
T Consensus 162 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~-----~~~~~~~~~----~~~---- 227 (290)
T cd05613 162 -RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN-----SQAEISRRI----LKS---- 227 (290)
T ss_pred -ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc-----cHHHHHHHh----hcc----
Confidence 12345689999999998753 47889999999999999999999986321110 011111110 000
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
. ...+......+.+++.+||+.||++|| ++.+++.+
T Consensus 228 -----~----~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 228 -----E----PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred -----C----CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 0 111223345788999999999999997 77777765
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-30 Score=290.07 Aligned_cols=231 Identities=25% Similarity=0.291 Sum_probs=185.8
Q ss_pred ccccCeeceeEEEEee-eCCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCC
Q 041821 467 KEELGRGGSGAVYKGV-LADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 542 (736)
..+||.|.||.||-|. ..+|...|+|.++... ...+...+|..+|..|.|||||+++|+-.+.+..+|.||||++|
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence 3479999999999999 6669999999885432 33456788999999999999999999999999999999999999
Q ss_pred CHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc--ceeeccc
Q 041821 543 SLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS--SQFSQIR 604 (736)
Q Consensus 543 sL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~--~~~~~~~ 604 (736)
+|.+.+...+..++.....+..|++.|++|||+++ +.+|++|||.|..+...... .......
T Consensus 1320 sLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~ 1399 (1509)
T KOG4645|consen 1320 SLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMM 1399 (1509)
T ss_pred cHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhc
Confidence 99999988888888888899999999999999763 36899999999987664211 1234578
Q ss_pred ccCcccChhcccCCC---CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 605 GTKGYMAPEWASNLP---ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 605 gt~~y~aPE~~~~~~---~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
||+.|||||++.+.. ..-++||||+|||+.||+||++||.....+ .+ +.-.+.
T Consensus 1400 GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-------~a-----------------IMy~V~ 1455 (1509)
T KOG4645|consen 1400 GTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-------WA-----------------IMYHVA 1455 (1509)
T ss_pred CCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-------hH-----------------HHhHHh
Confidence 999999999997643 567999999999999999999999633111 00 111111
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
-.-.+.+|......-.+++..||+.||++|.++.|++++=
T Consensus 1456 ~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1456 AGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred ccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence 1223345555677788999999999999999999988774
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.6e-29 Score=247.40 Aligned_cols=241 Identities=19% Similarity=0.200 Sum_probs=188.8
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCC------CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEe-C
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLAD------GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE-G 529 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 529 (736)
+.+.+.++...+-+|.||.||+|.+.+ .+.|-+|.++... .....++.|...+..+.|||+.++.+++.+ .
T Consensus 281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~ 360 (563)
T KOG1024|consen 281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDY 360 (563)
T ss_pred hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeecc
Confidence 455566677789999999999996543 4567788876533 334568899999999999999999998865 5
Q ss_pred CeEEEEEecCCCCCHhhhccc-----C---CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEccc
Q 041821 530 RHRLLIYEYVEKQSLDKHLFS-----S---YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADF 585 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~-----~---~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DF 585 (736)
..+++++.++.-|+|..+|.. . ..++..+...++.|++.|++|||.+++ ++||+|=
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDs 440 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDS 440 (563)
T ss_pred CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccc
Confidence 677999999999999999972 1 257778889999999999999997633 7899999
Q ss_pred CcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHH
Q 041821 586 GLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREV 664 (736)
Q Consensus 586 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 664 (736)
.+++.+.+.+...--........||+||.+.+..|+.++|||||||+||||+| |+.|+.... +.+
T Consensus 441 aLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeID------PfE-------- 506 (563)
T KOG1024|consen 441 ALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEID------PFE-------- 506 (563)
T ss_pred hhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccC------HHH--------
Confidence 99998776654433333345679999999999999999999999999999998 666654211 111
Q ss_pred HHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 665 KRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 665 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
+...+....+-..|-+++.++..+|..||..+|++||++++++..|.+.
T Consensus 507 -----------m~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 507 -----------MEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred -----------HHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 1222222334445667889999999999999999999999999998764
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-29 Score=243.29 Aligned_cols=262 Identities=19% Similarity=0.222 Sum_probs=184.0
Q ss_pred hhhhcccccCeeceeEEEEeeeCC-----CcEEEEEEeCccccc---HHHHHHHHHHHhcCCCCceeeEEEEEEe-CCeE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLAD-----GRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMWGFCSE-GRHR 532 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 532 (736)
..|+...+||+|.||.||+|...+ ...+|||+++..... .....+|+.+++.++||||+.+..++.. +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 457888999999999999996332 237999999765322 2456789999999999999999998877 7889
Q ss_pred EEEEecCCCCCHhhhcccC-----CCCCHHHHHHHHHHHHHHhhhhhcC--------------------CCccEEcccCc
Q 041821 533 LLIYEYVEKQSLDKHLFSS-----YFLGWKERFKVALGTAKGLAYLHHD--------------------EFEPKIADFGL 587 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~-----~~l~~~~~~~i~~~i~~gL~yLH~~--------------------~~~~kl~DFGl 587 (736)
++++||.+ -+|.+.|+.. ..++....+.|+-||+.|+.|||++ .+.+||+|||+
T Consensus 104 ~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGl 182 (438)
T KOG0666|consen 104 WLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGL 182 (438)
T ss_pred EEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccH
Confidence 99999997 6888888643 2688899999999999999999975 36899999999
Q ss_pred ccccCCCCCcc-eeecccccCcccChhcccCCC-CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH
Q 041821 588 AKLSQRGSNSS-QFSQIRGTKGYMAPEWASNLP-ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK 665 (736)
Q Consensus 588 a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (736)
++++...-..- ....++-|..|+|||.+.+.. |+.+.||||+|||+.||++-.+.|....+..+........-...+.
T Consensus 183 aR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf 262 (438)
T KOG0666|consen 183 ARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIF 262 (438)
T ss_pred HHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHH
Confidence 99886543321 244577899999999998865 9999999999999999999999887654332221110000011111
Q ss_pred HHHhhh-cccc--ccccc-------cC--ccCCCCCH--------HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 666 RKILYE-EEAW--IEEIV-------DP--RLKGKFNT--------NQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 666 ~~~~~~-~~~~--~~~~~-------d~--~~~~~~~~--------~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
+-+... +..| +..+- +- ........ .......+|+.++|+.||.+|.|+++.+++.--.
T Consensus 263 ~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~ 341 (438)
T KOG0666|consen 263 EVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFT 341 (438)
T ss_pred HHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccc
Confidence 100000 0000 00000 00 00000000 0112367899999999999999999998875433
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-29 Score=240.83 Aligned_cols=234 Identities=20% Similarity=0.171 Sum_probs=182.5
Q ss_pred hhhhcc-cccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEe----CCeEEE
Q 041821 462 STKSFK-EELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE----GRHRLL 534 (736)
Q Consensus 462 ~~~~~~-~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~~~l 534 (736)
++|.+. ++||-|-.|.|..+.. ..++.+|+|++....+ .++|+++.-+. .|||||++++++++ ...+.+
T Consensus 61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~K----ARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLi 136 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPK----ARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLI 136 (400)
T ss_pred hhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHH----HHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEe
Confidence 445554 4799999999999984 4589999999865443 45678766555 59999999999865 346789
Q ss_pred EEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCcccccCC
Q 041821 535 IYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQR 593 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~~~~~ 593 (736)
|||.|+||.|...+.+++ .+++.++-.|+.||+.|+.|||+.++ .+||+|||+|+.-..
T Consensus 137 VmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~ 216 (400)
T KOG0604|consen 137 VMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE 216 (400)
T ss_pred eeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCC
Confidence 999999999999998766 59999999999999999999997533 679999999986543
Q ss_pred CCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
. ....+.+-|+.|.|||++....|+...|+||+||++|-|++|-+||+..... .+...+++++..+.-
T Consensus 217 ~---~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~---------aispgMk~rI~~gqy 284 (400)
T KOG0604|consen 217 P---GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---------AISPGMKRRIRTGQY 284 (400)
T ss_pred C---ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc---------cCChhHHhHhhccCc
Confidence 2 2356678899999999999999999999999999999999999999854321 122223333322210
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+..+.-...++...++|+.+|..+|.+|.|+.+++.+
T Consensus 285 ---------~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 285 ---------EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred ---------cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 01111223456788999999999999999999999875
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=255.39 Aligned_cols=248 Identities=17% Similarity=0.244 Sum_probs=174.5
Q ss_pred cccCee--ceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRG--GSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G--~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
++||+| +||+||+++. ..++.||||.+.... ...+.+.+|+.+++.++||||+++++++..++..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 457766 9999999995 468999999986432 2336688999999999999999999999999999999999999
Q ss_pred CCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcce----
Q 041821 542 QSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQ---- 599 (736)
Q Consensus 542 gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~---- 599 (736)
++|.+++.... .+++..+..++.|++.||+|||+.++ .+|++||+.+...........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYD 163 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccc
Confidence 99999987643 58999999999999999999997643 578899876543322111100
Q ss_pred -eecccccCcccChhcccCC--CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHH-------------H
Q 041821 600 -FSQIRGTKGYMAPEWASNL--PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR-------------E 663 (736)
Q Consensus 600 -~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------------~ 663 (736)
.....++..|||||++.+. .++.++|||||||++|||++|+.||....... ....... .
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 164 FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ-----MLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH-----HHHHHhcCCCCCCccccccch
Confidence 0112346679999998763 47899999999999999999999986432110 0000000 0
Q ss_pred HHHHHhhhcc-------------ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 664 VKRKILYEEE-------------AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 664 ~~~~~~~~~~-------------~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.......... .....+.+..+...........+.+|+.+||+.||++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0000000000 00001111122222334456789999999999999999999999875
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=265.03 Aligned_cols=252 Identities=25% Similarity=0.291 Sum_probs=187.3
Q ss_pred hcccccCeeceeEEEEee-eCCCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeC------CeEEEE
Q 041821 465 SFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG------RHRLLI 535 (736)
Q Consensus 465 ~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~lv 535 (736)
...+.||+|+||.||+|+ ...|+.||||.++.. ....+...+|+++|++++|+|||++++.=++. +...+|
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 345689999999999999 556999999999763 34456678999999999999999999876553 356899
Q ss_pred EecCCCCCHhhhcccCC---CCCHHHHHHHHHHHHHHhhhhhcCCC--------------------ccEEcccCcccccC
Q 041821 536 YEYVEKQSLDKHLFSSY---FLGWKERFKVALGTAKGLAYLHHDEF--------------------EPKIADFGLAKLSQ 592 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~---~l~~~~~~~i~~~i~~gL~yLH~~~~--------------------~~kl~DFGla~~~~ 592 (736)
||||++|||...|.+.. .|++.+.+.++.+++.||.|||++++ .-||+|||.|+.+.
T Consensus 96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~ 175 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELD 175 (732)
T ss_pred EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCC
Confidence 99999999999998643 79999999999999999999997643 23999999999887
Q ss_pred CCCCcceeecccccCcccChhccc-CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 593 RGSNSSQFSQIRGTKGYMAPEWAS-NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
.+. .....+||..|.+||++. .+.|+..+|.|||||++||.+||..||.....+... ..+......+-..+
T Consensus 176 d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~-----~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 176 DNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNN-----KEIMWHIITKKPSG 247 (732)
T ss_pred CCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCcccc-----chhhhhhhccCCCc
Confidence 655 478899999999999999 488999999999999999999999999754322110 01111111111111
Q ss_pred ccccccccccCcc------------CCCCCHHHHHHHHHHHHHcccCCCCCCC--CHHHHHHHHhcccccc
Q 041821 672 EEAWIEEIVDPRL------------KGKFNTNQAATLIGIGISCVDEDRSKRP--TMDSVVQSLLECETES 728 (736)
Q Consensus 672 ~~~~~~~~~d~~~------------~~~~~~~~~~~l~~li~~cl~~dP~~RP--s~~evl~~L~~~~~~~ 728 (736)
+.-...+.. ..........++-..+..+|..+|++|- ...+....+..+....
T Consensus 248 ----v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~ 314 (732)
T KOG4250|consen 248 ----VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLK 314 (732)
T ss_pred ----eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhh
Confidence 111111111 1112344456677777888999999998 6666666555554433
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-28 Score=256.93 Aligned_cols=246 Identities=13% Similarity=0.092 Sum_probs=175.6
Q ss_pred cccccCeeceeEEEEeeeCCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCC
Q 041821 466 FKEELGRGGSGAVYKGVLADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542 (736)
Q Consensus 466 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 542 (736)
+.+.+|.|+++.|+++.. +++.||||++... ....+.+.+|+.+++.++|+||+++++++.+.+..+++|||++++
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 444566666666666665 6899999998653 234467899999999999999999999999999999999999999
Q ss_pred CHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc-----ce
Q 041821 543 SLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS-----SQ 599 (736)
Q Consensus 543 sL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~-----~~ 599 (736)
+|.+++... ..+++..+..++.|+++||+|||+.+ ..+||+|||.+......... ..
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~ 164 (314)
T cd08216 85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDF 164 (314)
T ss_pred CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccc
Confidence 999998753 36889999999999999999999763 36899999998755332111 11
Q ss_pred eecccccCcccChhcccC--CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHh--------
Q 041821 600 FSQIRGTKGYMAPEWASN--LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL-------- 669 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 669 (736)
.....++..|+|||++.. ..++.++|||||||++|||++|..||...... ............
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 236 (314)
T cd08216 165 PKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT--------QMLLEKVRGTVPCLLDKSTY 236 (314)
T ss_pred cccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhccCccccccCch
Confidence 223457789999999876 35889999999999999999999998743211 011111100000
Q ss_pred hhccccccc----cccCc----cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 670 YEEEAWIEE----IVDPR----LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 670 ~~~~~~~~~----~~d~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......... ..++. ............+.+++.+||+.||++|||+.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 237 PLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred hhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000000000 00000 0111223345678999999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-28 Score=255.00 Aligned_cols=235 Identities=23% Similarity=0.318 Sum_probs=176.0
Q ss_pred HhhhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCccc--ccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 536 (736)
...+.+.+.||+|+||.||+|.... ++.||||.++... ....++..|+.++.+.. ||||+++++++.++...+++|
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 3557788999999999999999754 8999999996532 23455677887776765 999999999999999999999
Q ss_pred ecCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEcccCcccccCCCCCcc
Q 041821 537 EYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 537 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~~~~~~~~~~ 598 (736)
||++ ++|..++.. ...+++..+..++.|+++||+|||+. +..+||+|||++..+.....
T Consensus 94 e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~-- 170 (296)
T cd06618 94 ELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA-- 170 (296)
T ss_pred eccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc--
Confidence 9985 577776654 34789999999999999999999963 23689999999976643322
Q ss_pred eeecccccCcccChhcccCCC----CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLP----ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.....++..|+|||.+.... ++.++||||||+++|||++|+.||..... ... ... ......
T Consensus 171 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~-~~~----~~~~~~-- 235 (296)
T cd06618 171 -KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT-------EFE-VLT----KILQEE-- 235 (296)
T ss_pred -ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh-------HHH-HHH----HHhcCC--
Confidence 22345788999999987553 78999999999999999999999863210 000 000 000000
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
.+... ........+.+++.+||+.||++||++.+++++-
T Consensus 236 ------~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 236 ------PPSLP--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred ------CCCCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 00000 0112345789999999999999999999998774
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.2e-29 Score=255.66 Aligned_cols=225 Identities=24% Similarity=0.298 Sum_probs=180.9
Q ss_pred cccCeeceeEEEEeee-CCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCC
Q 041821 468 EELGRGGSGAVYKGVL-ADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQS 543 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 543 (736)
+.||+|.||+||-|+. ++|+.||||++.+. .+.+.++++|+.||.+++||.||.+-..|+..+..++|||-+. |+
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-GD 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-GD 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-ch
Confidence 5799999999999994 56999999999763 3556789999999999999999999999999999999999995 66
Q ss_pred Hhhhccc--CCCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCcccccCCCCCcceeec
Q 041821 544 LDKHLFS--SYFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 544 L~~~l~~--~~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+.+.|.. .+.|++.....++.||+.||.|||.+++ ++||+|||+|+++....- ...
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF---Rrs 725 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF---RRS 725 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh---hhh
Confidence 6655543 3479999999999999999999998755 689999999999876543 456
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
++||+.|+|||++..+.|+..-|+||.|||+|--++|..||... ++ +.. ++.. ..-+..+
T Consensus 726 VVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd---Ed-----Ind-------QIQN-----AaFMyPp 785 (888)
T KOG4236|consen 726 VVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED---ED-----IND-------QIQN-----AAFMYPP 785 (888)
T ss_pred hcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc---cc-----hhH-------Hhhc-----cccccCC
Confidence 89999999999999999999999999999999999999999722 11 111 1111 1111222
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.. -.+.....++||...||..-++|-|.+.-+.+
T Consensus 786 ~P----W~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 786 NP----WSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred Cc----hhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 21 23445577889999999999999998877654
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=250.80 Aligned_cols=246 Identities=17% Similarity=0.142 Sum_probs=170.9
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCC----CcEEEEEEeCccccc---H---------HHHHHHHHHHhcCCCCceee
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLHQG---E---------EVFWAEVSTIGKIYHMNLVR 521 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~---~---------~~~~~E~~~l~~l~h~niv~ 521 (736)
++....|.+.+.||+|+||.||+|...+ +..+|+|........ + .....+...+..+.|+||++
T Consensus 8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~ 87 (294)
T PHA02882 8 DITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPK 87 (294)
T ss_pred ccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCc
Confidence 4555678899999999999999999544 345666654322111 0 11223445566788999999
Q ss_pred EEEEEEeCC----eEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccE
Q 041821 522 MWGFCSEGR----HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPK 581 (736)
Q Consensus 522 l~~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~k 581 (736)
+++++.... ..++++|++. .++.+.+......++..+..++.|+++||+|||+.+ ..+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~ 166 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGY 166 (294)
T ss_pred EEEeeeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEE
Confidence 999776543 4478888874 466666655445788889999999999999999763 3689
Q ss_pred EcccCcccccCCCCCc-----ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhH
Q 041821 582 IADFGLAKLSQRGSNS-----SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAE 656 (736)
Q Consensus 582 l~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~ 656 (736)
|+|||+|+.+...... .......||+.|+|||+..+..++.++|||||||++|||++|+.||........ .
T Consensus 167 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~----~ 242 (294)
T PHA02882 167 IIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN----L 242 (294)
T ss_pred EEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH----H
Confidence 9999999876432211 112234699999999999999999999999999999999999999974422111 1
Q ss_pred HHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 657 LKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
...........+.. +.+. ....+..+.+++..|++.+|++||++.++++.|+
T Consensus 243 ~~~~~~~~~~~~~~-----------~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 243 IHAAKCDFIKRLHE-----------GKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHhHHHHHHHhhh-----------hhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 11111111111111 1110 1112466889999999999999999999998763
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=249.92 Aligned_cols=227 Identities=23% Similarity=0.254 Sum_probs=184.7
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
.++..-++||+||||.|+-++.+ +|+.+|.|++.+. .+++...++|-++|.+++.+.||.+--.|+..+.+++|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 34555679999999999999954 5899999998542 345566789999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcc
Q 041821 537 EYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~ 598 (736)
..|.||+|.-+|...+ .++++.+.-++.+|+-||++||.+ +++++|+|+|||..+..+..
T Consensus 265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~-- 342 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP-- 342 (591)
T ss_pred EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCc--
Confidence 9999999999998765 799999999999999999999975 45899999999998877654
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
....+||.+|||||++.+..|+...|.||+||+||||+.|+.||....+... .+.+.+.....
T Consensus 343 -~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk---------~eEvdrr~~~~------- 405 (591)
T KOG0986|consen 343 -IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK---------REEVDRRTLED------- 405 (591)
T ss_pred -cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh---------HHHHHHHHhcc-------
Confidence 3445899999999999999999999999999999999999999974322111 00111111110
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT 713 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 713 (736)
...++...++++.+|....|+.||++|.-
T Consensus 406 ------~~ey~~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 406 ------PEEYSDKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred ------hhhcccccCHHHHHHHHHHHccCHHHhcc
Confidence 12345566678888888999999999974
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-28 Score=258.54 Aligned_cols=257 Identities=21% Similarity=0.256 Sum_probs=187.0
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC-----eEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR-----HRL 533 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 533 (736)
+|.+.+.||+|+||.||+|+.. .++.||||++.... ...+.+.+|+.+++.++||||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 3677889999999999999964 48999999986532 34467889999999999999999999998875 789
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
+||||++ ++|.+++.....+++..+..++.|+++||+|||+.+ ..++|+|||++.........
T Consensus 81 lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~ 159 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE 159 (330)
T ss_pred EEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc
Confidence 9999998 589999987778999999999999999999999764 37899999999876554311
Q ss_pred -ceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH----HHHhhh
Q 041821 598 -SQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK----RKILYE 671 (736)
Q Consensus 598 -~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 671 (736)
.......++..|+|||++.+. .++.++||||||+++|+|++|+.||...... ........... ..+...
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~-----~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI-----DQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH-----HHHHHHHHhcCCCChhHhhhc
Confidence 113345688999999999887 7899999999999999999999998643211 00000000000 000000
Q ss_pred cccccccccc---CccC---CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hhccc
Q 041821 672 EEAWIEEIVD---PRLK---GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS--LLECE 725 (736)
Q Consensus 672 ~~~~~~~~~d---~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 725 (736)
........+. .... .......+..+.+++.+||+.+|++|||+.+++++ +++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred cccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 0000000000 0000 00111235678999999999999999999999986 55543
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=257.65 Aligned_cols=250 Identities=20% Similarity=0.275 Sum_probs=176.3
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC------e
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR------H 531 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 531 (736)
..|.+.+.||+|+||.||+|+. .+++.||||++... ......+.+|+.++++++||||+++++++.... .
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 3566778999999999999995 46899999998653 223356789999999999999999999987543 4
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.++|+||+. .+|..++. ..+++..+..++.|+++||+|||+.+ ..+||+|||+++.....
T Consensus 95 ~~lv~e~~~-~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~- 170 (342)
T cd07879 95 FYLVMPYMQ-TDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE- 170 (342)
T ss_pred EEEEecccc-cCHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC-
Confidence 689999996 47776653 35899999999999999999999763 37899999999765332
Q ss_pred CcceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHH-------HHH
Q 041821 596 NSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV-------KRK 667 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~ 667 (736)
.....++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ........... ...
T Consensus 171 ----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 171 ----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-----LDQLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred ----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHhcCCCCHHHHHH
Confidence 233467889999999876 4689999999999999999999999974311 11111111000 000
Q ss_pred Hhhhc-cccccccccCccCCCC---CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hhccc
Q 041821 668 ILYEE-EAWIEEIVDPRLKGKF---NTNQAATLIGIGISCVDEDRSKRPTMDSVVQS--LLECE 725 (736)
Q Consensus 668 ~~~~~-~~~~~~~~d~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 725 (736)
..... ..+.. .......... .+.....+.+++.+||+.||++||++++++.+ ++...
T Consensus 242 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 242 LEDKAAKSYIK-SLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred hcccchHHHHh-hcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 00000 00000 0000000000 01123568899999999999999999999976 55554
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.6e-28 Score=263.29 Aligned_cols=236 Identities=22% Similarity=0.277 Sum_probs=194.8
Q ss_pred HHhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEe-----CCeE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE-----GRHR 532 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-----~~~~ 532 (736)
...+++|.+.||.|.+|.||+++ .++++.+|||++......+++...|..+|+.. .|||++.++|++.. ++.+
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqL 96 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQL 96 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeE
Confidence 34567889999999999999999 66799999999988888888888999999988 69999999999864 6789
Q ss_pred EEEEecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRG 594 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~ 594 (736)
|||||||.+||..++++.. ..+.|..+..|++.+++||.+||.+ +..+||.|||++..+...
T Consensus 97 WLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT 176 (953)
T KOG0587|consen 97 WLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST 176 (953)
T ss_pred EEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecc
Confidence 9999999999999998764 3789999999999999999999964 347899999999877654
Q ss_pred CCcceeecccccCcccChhcccC-----CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 595 SNSSQFSQIRGTKGYMAPEWASN-----LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
.. ...+.+||+.|||||++.- ..|+..+|+||||++..||.-|.+|+..+++... +
T Consensus 177 ~g--rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra--------L--------- 237 (953)
T KOG0587|consen 177 VG--RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA--------L--------- 237 (953)
T ss_pred cc--cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh--------h---------
Confidence 33 2456789999999999863 3478899999999999999999999875543211 0
Q ss_pred hhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 670 YEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 670 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+.-.-.|...-.-+....+++.++|..||..|-++||++.++++|
T Consensus 238 ------F~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 238 ------FLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ------ccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 111223333333467788999999999999999999999998875
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-28 Score=260.33 Aligned_cols=252 Identities=21% Similarity=0.221 Sum_probs=176.7
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC----------
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG---------- 529 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---------- 529 (736)
.+|.+.+.||+|+||.||+|+. .+++.||+|.+.... ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 5678889999999999999995 458899999986533 4456688999999999999999999876543
Q ss_pred ----CeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-----------------ccEEcccCcc
Q 041821 530 ----RHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-----------------EPKIADFGLA 588 (736)
Q Consensus 530 ----~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-----------------~~kl~DFGla 588 (736)
...++||||++ ++|.+++... .+++..+..++.||+.||.|||+.++ .+||+|||++
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~ 162 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQG-PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLA 162 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccc
Confidence 35789999997 6898887543 58999999999999999999997643 4799999999
Q ss_pred cccCCCCCcc-eeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHH
Q 041821 589 KLSQRGSNSS-QFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR 666 (736)
Q Consensus 589 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 666 (736)
+.+....... ......++..|+|||.+.. ..++.++|||||||++|||++|+.||...... ............
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~-----~~~~~~~~~~~~ 237 (342)
T cd07854 163 RIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHEL-----EQMQLILESVPV 237 (342)
T ss_pred eecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHhcCC
Confidence 7654322111 1123457889999998754 55889999999999999999999999643211 111111100000
Q ss_pred HHhhhcccc---cccccc-CccCCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 667 KILYEEEAW---IEEIVD-PRLKGKFN-----TNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 667 ~~~~~~~~~---~~~~~d-~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......... ...... .......+ ......+.+++.+||+.||++|||+.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 000000000 000000 00000001 1233568899999999999999999999965
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=250.01 Aligned_cols=248 Identities=23% Similarity=0.222 Sum_probs=181.1
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
|++.+.||+|+||.||+|+.. +++.+|+|.+... ....+.+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 345678999999999999954 4899999999764 233466788999999999999999999999999999999999
Q ss_pred CCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 540 EKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 540 ~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+ ++|.+++... ..+++..+..++.|+++||.|||+.+ ..+||+|||+++....... ....
T Consensus 81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~~~ 157 (282)
T cd07829 81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR--TYTH 157 (282)
T ss_pred C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--ccCc
Confidence 8 6999999876 47999999999999999999999763 3689999999987654322 1233
Q ss_pred ccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHH-------HHHHhhh--c
Q 041821 603 IRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV-------KRKILYE--E 672 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~--~ 672 (736)
..++..|+|||.+.+. .++.++|||||||++|||++|+.||..... ........... +.....- .
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSE-----IDQLFKIFQILGTPTEESWPGVTKLPDY 232 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHHHHhCCCcHHHHHhhcccccc
Confidence 4567889999998766 789999999999999999999988864321 11111111100 0000000 0
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.............. ..+.....+.+++.+||+.||++||++.+|+.+
T Consensus 233 ~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 233 KPTFPKFPPKDLEK-VLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccccCccchHH-hcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000000000000 011124679999999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-28 Score=246.78 Aligned_cols=222 Identities=23% Similarity=0.217 Sum_probs=177.2
Q ss_pred cCeeceeEEEEeeeC-CCcEEEEEEeCcccc----cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 470 LGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQ----GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 470 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
||+|+||.||++... +++.+|+|.+..... ....+..|+.++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 799999999999954 488999999865322 345788999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccccCc
Q 041821 545 DKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGTKG 608 (736)
Q Consensus 545 ~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~ 608 (736)
.+++.....+++..+..++.|+++||.|||+.+ ..++|+|||++........ ......++..
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~ 158 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS--RTNTFCGTPE 158 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCC--cccCCcCCcc
Confidence 999987778999999999999999999999753 3689999999987654321 1334568889
Q ss_pred ccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCC
Q 041821 609 YMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKF 688 (736)
Q Consensus 609 y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 688 (736)
|+|||...+...+.++|+||||+++|||++|+.||..... ........ .. ....
T Consensus 159 ~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---------~~~~~~~~---------------~~--~~~~ 212 (250)
T cd05123 159 YLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---------KEIYEKIL---------------KD--PLRF 212 (250)
T ss_pred ccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---------HHHHHHHh---------------cC--CCCC
Confidence 9999999888899999999999999999999999863211 11111110 00 0112
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCH---HHHHH
Q 041821 689 NTNQAATLIGIGISCVDEDRSKRPTM---DSVVQ 719 (736)
Q Consensus 689 ~~~~~~~l~~li~~cl~~dP~~RPs~---~evl~ 719 (736)
+...+..+.+++.+||..||++||++ .++++
T Consensus 213 ~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~ 246 (250)
T cd05123 213 PEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKA 246 (250)
T ss_pred CCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence 22235678899999999999999999 45544
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=252.77 Aligned_cols=252 Identities=21% Similarity=0.215 Sum_probs=175.2
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC-------
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR------- 530 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 530 (736)
..|.+.++||+|+||.||+|+. .+++.+|||++.... .....+.+|++++++++||||+++++++.+..
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 87 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKR 87 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccC
Confidence 5688889999999999999995 458899999985422 22345678999999999999999999875433
Q ss_pred -eEEEEEecCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccC
Q 041821 531 -HRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQ 592 (736)
Q Consensus 531 -~~~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~ 592 (736)
..++||||+. ++|...+.. ...+++..+..++.|+++||.|||+.+ ..+||+|||+++...
T Consensus 88 ~~~~lv~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 166 (311)
T cd07866 88 GSVYMVTPYMD-HDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYD 166 (311)
T ss_pred ceEEEEEecCC-cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence 4699999997 467766654 347999999999999999999999764 368999999998654
Q ss_pred CCCCcc---------eeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHH
Q 041821 593 RGSNSS---------QFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR 662 (736)
Q Consensus 593 ~~~~~~---------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 662 (736)
...... ......+++.|+|||.+.+. .++.++|||||||++|||++|++||...... .....+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-----~~~~~~~~ 241 (311)
T cd07866 167 GPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-----DQLHLIFK 241 (311)
T ss_pred CCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHH
Confidence 332111 12335678899999987654 5899999999999999999999998643211 11111111
Q ss_pred HHHHHHhhhc-c--ccccccccCccCCCCC-------HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 663 EVKRKILYEE-E--AWIEEIVDPRLKGKFN-------TNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 663 ~~~~~~~~~~-~--~~~~~~~d~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
... ...... . ..+....+.......+ ......+.+++.+||+.||++|||+.|++.+
T Consensus 242 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 242 LCG-TPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HhC-CCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 000 000000 0 0000000000000000 1122568899999999999999999999864
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=254.40 Aligned_cols=251 Identities=20% Similarity=0.201 Sum_probs=175.9
Q ss_pred hhcccccCeeceeEEEEeeeC-C--CcEEEEEEeCccc---ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeC----CeE
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-D--GRAVAVKRLGDLH---QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEG----RHR 532 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~--~~~vavK~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~~ 532 (736)
|++.+.||+|+||.||+++.. . +..||||++.... ...+.+.+|+.+++++ +||||+++++.+... ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 567889999999999999953 3 6789999986422 2345678899999999 599999999976432 457
Q ss_pred EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~ 596 (736)
++++||+. ++|.+++.....+++..+..++.||+.||.|||+.++ .+||+|||+++.......
T Consensus 82 ~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~ 160 (332)
T cd07857 82 YLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPG 160 (332)
T ss_pred EEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccc
Confidence 88999986 7999999877789999999999999999999997643 689999999986543222
Q ss_pred c--ceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHH-------HHHH
Q 041821 597 S--SQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR-------EVKR 666 (736)
Q Consensus 597 ~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------~~~~ 666 (736)
. .......|+..|+|||++.+ ..++.++|||||||++|||++|..||...... ..+..... ....
T Consensus 161 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~ 235 (332)
T cd07857 161 ENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-----DQLNQILQVLGTPDEETLS 235 (332)
T ss_pred cccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-----HHHHHHHHHhCCCCHHHHH
Confidence 1 11234578999999998765 56899999999999999999999998643210 00000000 0000
Q ss_pred HHhhhccccccccccCccC---CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 667 KILYEEEAWIEEIVDPRLK---GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 667 ~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+................. ....+.....+.+++.+|++.||++|||+.+++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 236 RIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000000000000 00011124578899999999999999999999865
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-28 Score=237.86 Aligned_cols=244 Identities=20% Similarity=0.250 Sum_probs=186.4
Q ss_pred cccCeeceeEEEEee-eCCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
+.||+|+|+.|--+. +.++..+|||++.+.. ..+.++.+|++++.+.+ |+||++|+++|+++...|||||-|.+|+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 579999999999988 7789999999997754 55677889999999995 99999999999999999999999999999
Q ss_pred hhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCcccccCCCCC-----ccee
Q 041821 545 DKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSN-----SSQF 600 (736)
Q Consensus 545 ~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~~~~~~~~-----~~~~ 600 (736)
..+|.++..+++.++.++..+|+.||.|||.+++ -+||+||.++.-+..... ....
T Consensus 164 LshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L 243 (463)
T KOG0607|consen 164 LSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPEL 243 (463)
T ss_pred HHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccc
Confidence 9999999999999999999999999999998755 469999988754432221 1234
Q ss_pred ecccccCcccChhccc---C--CCCccccceechhHHHHHHHhCCCCCCccccCC--ccchhHHHHHHHHHHHHHhhhcc
Q 041821 601 SQIRGTKGYMAPEWAS---N--LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDG--EGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~---~--~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
.+.+|+..|||||+.. + ..|+.+.|.||||||||-|++|-+||...-..+ ....+.-..--..+.+.+.++.
T Consensus 244 ~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGk- 322 (463)
T KOG0607|consen 244 LTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGK- 322 (463)
T ss_pred cCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccC-
Confidence 5678999999999863 2 348999999999999999999999998654321 1111111111111122222221
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
-+.-| ..-...+....+++...+-.||.+|.++.+++.+
T Consensus 323 ---YeFPd-----kdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 323 ---YEFPD-----KDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred ---CcCCh-----hhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 01101 1112345567888888999999999999999874
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=253.06 Aligned_cols=245 Identities=20% Similarity=0.212 Sum_probs=177.6
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEe-CCeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE-GRHRLLI 535 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv 535 (736)
...|.+.+.||+|+||.||++.. .+++.||||++... ....+.+.+|+.++++++||||+++++++.. ....++|
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv 88 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFV 88 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEE
Confidence 34577889999999999999984 46899999988542 2234667899999999999999999999875 5678999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcce
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~ 599 (736)
+||+ +++|.+++.. ..+++..+..++.|+++||.|||+.++ .+||+|||++......
T Consensus 89 ~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~----- 161 (328)
T cd07856 89 TELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ----- 161 (328)
T ss_pred eehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCC-----
Confidence 9998 5689888764 357888899999999999999997643 6899999999754322
Q ss_pred eecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHH-------HHHHHHHhhh
Q 041821 600 FSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFV-------REVKRKILYE 671 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 671 (736)
.....++..|+|||.+.+ ..++.++||||||+++|||++|+.||..... ........ ..+.+.....
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd07856 162 MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH-----VNQFSIITDLLGTPPDDVINTICSE 236 (328)
T ss_pred cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHHHhccch
Confidence 223457889999998766 5689999999999999999999999864321 00011000 0111110000
Q ss_pred ccccccccc-cCccCCCCCH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 672 EEAWIEEIV-DPRLKGKFNT-----NQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 672 ~~~~~~~~~-d~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ..+.. ........+. .....+.+++.+||+.+|++|||+.+++.+
T Consensus 237 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 237 N---TLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred h---hHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 00000 0000011111 124678999999999999999999999987
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-29 Score=218.64 Aligned_cols=103 Identities=45% Similarity=0.714 Sum_probs=75.7
Q ss_pred CCceEEEecCCCCCCCC--CceEEEeeCCcEEEEeCCCcEEEeC-CCCCC--CcceEEEccCCCeEEEccCCceeeeecC
Q 041821 26 DRTVVWTANRDRPVNGQ--GSRASLRRNGAMVLTDVDDTVIWMT-NTTST--GADRAELLDTGNLVLKDRHGKILWQSFD 100 (736)
Q Consensus 26 ~~tvVW~Anr~~p~~~~--~~~l~l~~~G~L~l~~~~~~~vWst-n~~~~--~~~~a~LldsGNlVl~~~~~~~lWqSFd 100 (736)
++||||+|||+.|+..+ .++|.|..||+|+|.|.+++++|++ ++.+. .+..|+|+|+|||||+|..+.+||||||
T Consensus 1 ~~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~ 80 (114)
T PF01453_consen 1 PRTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSFD 80 (114)
T ss_dssp ---------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEESTT
T ss_pred CcccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeecC
Confidence 47999999999999543 4899999999999999999999999 54443 3678999999999999999999999999
Q ss_pred CCCCccCCCcccCCC------ceEEecCCCCCCC
Q 041821 101 YPTDTLLPNQVFRKS------TKLISGVGNGTYA 128 (736)
Q Consensus 101 ~PTDTlLpg~~l~~~------~~L~S~~s~~d~s 128 (736)
|||||+||+|+|+.+ ..|+||++.+|||
T Consensus 81 ~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps 114 (114)
T PF01453_consen 81 YPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS 114 (114)
T ss_dssp SSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred CCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence 999999999999873 3499999999996
|
Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B .... |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-28 Score=246.63 Aligned_cols=241 Identities=24% Similarity=0.270 Sum_probs=182.9
Q ss_pred HHHHhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCccccc--------HHHHHHHHHHHhcCCCCceeeEEEEEE-
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG--------EEVFWAEVSTIGKIYHMNLVRMWGFCS- 527 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~l~~~~~- 527 (736)
-+...+|-+...||+|||++||++. +...+.||||+-...... .+...+|.+|.+.|+||.||++|+++.
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl 538 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL 538 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence 3456677788899999999999998 566889999987432211 134678999999999999999999986
Q ss_pred eCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC---------------------CCccEEcccC
Q 041821 528 EGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD---------------------EFEPKIADFG 586 (736)
Q Consensus 528 ~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~---------------------~~~~kl~DFG 586 (736)
+.+.++-|+|||++.+|+-+|+....+++++++.|+.||+.||.||.+. -+.+||+|||
T Consensus 539 DtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 4567789999999999999999999999999999999999999999754 2368999999
Q ss_pred cccccCCCCCcc-----eeecccccCcccChhcccCC----CCccccceechhHHHHHHHhCCCCCCccccCCccchhHH
Q 041821 587 LAKLSQRGSNSS-----QFSQIRGTKGYMAPEWASNL----PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAEL 657 (736)
Q Consensus 587 la~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~ 657 (736)
+++++..+.... ......||.+|++||.+.-. .++.|+||||+|||+|..+.|++||.......
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ------- 691 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ------- 691 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH-------
Confidence 999987665432 23457799999999987533 37889999999999999999999997432110
Q ss_pred HHHHHHHHHHHhhhccccccccccC-ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 041821 658 KRFVREVKRKILYEEEAWIEEIVDP-RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719 (736)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 719 (736)
.+... ..++.. ...-+..+.......++|++||++.-++|....++..
T Consensus 692 -dILqe-------------NTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 692 -DILQE-------------NTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred -HHHhh-------------hchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 01000 001110 0001111223456778899999999999988777653
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-27 Score=254.54 Aligned_cols=247 Identities=21% Similarity=0.259 Sum_probs=176.9
Q ss_pred HhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC------
Q 041821 461 KSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR------ 530 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 530 (736)
..+|.+.+.||+|+||.||++. ..++..||||++.... ...+.+.+|+.+|++++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH 93 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence 3567788899999999999998 4568999999986432 23356789999999999999999999987654
Q ss_pred eEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCC
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRG 594 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~ 594 (736)
..++||||+ +++|.+++.. ..+++..+..++.|+++||.|||+.+ ..+||+|||++......
T Consensus 94 ~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 171 (343)
T cd07880 94 DFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE 171 (343)
T ss_pred eEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC
Confidence 458999999 6799888764 46899999999999999999999753 36899999999865432
Q ss_pred CCcceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHH-------HHHH
Q 041821 595 SNSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR-------EVKR 666 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------~~~~ 666 (736)
.....+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||...... ........ ....
T Consensus 172 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~ 241 (343)
T cd07880 172 -----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-----DQLMEIMKVTGTPSKEFVQ 241 (343)
T ss_pred -----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHhcCCCCHHHHH
Confidence 223457899999999876 45889999999999999999999998643210 00100000 0000
Q ss_pred HHhhhcc-cc---ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 667 KILYEEE-AW---IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 667 ~~~~~~~-~~---~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+..... .. +.......+ ..........+.+++.+|++.||++|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 242 KLQSEDAKNYVKKLPRFRKKDF-RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred hhcchhHHHHHHhccccCcchH-HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000 00 000000000 00111233468899999999999999999999954
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-28 Score=271.31 Aligned_cols=231 Identities=29% Similarity=0.383 Sum_probs=171.6
Q ss_pred hhcccccCeeceeEEEEee-eCCCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEe------------
Q 041821 464 KSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE------------ 528 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------------ 528 (736)
++-.+.||+||||.|||++ .-||+.+|||+|... ......+.+|+.+|++|+|||||+++..+.+
T Consensus 481 FEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~ 560 (1351)
T KOG1035|consen 481 FEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVA 560 (1351)
T ss_pred hHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccc
Confidence 3445689999999999999 347999999999654 3344567899999999999999999864210
Q ss_pred ------------------------------------------------------------------C-------------
Q 041821 529 ------------------------------------------------------------------G------------- 529 (736)
Q Consensus 529 ------------------------------------------------------------------~------------- 529 (736)
+
T Consensus 561 ~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~ 640 (1351)
T KOG1035|consen 561 SDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSV 640 (1351)
T ss_pred cchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCcc
Confidence 0
Q ss_pred ----------------------------CeEEEEEecCCCCCHhhhcccCCCC-CHHHHHHHHHHHHHHhhhhhcCCC--
Q 041821 530 ----------------------------RHRLLIYEYVEKQSLDKHLFSSYFL-GWKERFKVALGTAKGLAYLHHDEF-- 578 (736)
Q Consensus 530 ----------------------------~~~~lv~e~~~~gsL~~~l~~~~~l-~~~~~~~i~~~i~~gL~yLH~~~~-- 578 (736)
..+||-||||+...|.+++.++... .....++++++|+.||+|+|+.++
T Consensus 641 ~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIH 720 (1351)
T KOG1035|consen 641 ILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIH 720 (1351)
T ss_pred ccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceee
Confidence 1247889999998888888776644 577889999999999999997643
Q ss_pred --------------ccEEcccCcccccC----------------CCCCcceeecccccCcccChhcccCCC---Cccccc
Q 041821 579 --------------EPKIADFGLAKLSQ----------------RGSNSSQFSQIRGTKGYMAPEWASNLP---ITAKVD 625 (736)
Q Consensus 579 --------------~~kl~DFGla~~~~----------------~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~D 625 (736)
.+||+|||+|.... .+......+..+||.-|+|||++.+.. |+.|+|
T Consensus 721 RDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiD 800 (1351)
T KOG1035|consen 721 RDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKID 800 (1351)
T ss_pred ccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhh
Confidence 78999999998722 111222456789999999999997654 999999
Q ss_pred eechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC--CCCCHHHHHHHHHHHHHc
Q 041821 626 VYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK--GKFNTNQAATLIGIGISC 703 (736)
Q Consensus 626 vwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~l~~li~~c 703 (736)
|||+|||++||+. ||.... +-....... -++.+. ..+..+....-.++|.+|
T Consensus 801 mYSLGIVlFEM~y---PF~TsM--------ERa~iL~~L---------------R~g~iP~~~~f~~~~~~~e~slI~~L 854 (1351)
T KOG1035|consen 801 MYSLGIVLFEMLY---PFGTSM--------ERASILTNL---------------RKGSIPEPADFFDPEHPEEASLIRWL 854 (1351)
T ss_pred hHHHHHHHHHHhc---cCCchH--------HHHHHHHhc---------------ccCCCCCCcccccccchHHHHHHHHH
Confidence 9999999999995 354221 112222221 122221 123334445567799999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 041821 704 VDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 704 l~~dP~~RPs~~evl~~ 720 (736)
++.||.+||||.|+|..
T Consensus 855 l~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 855 LSHDPSKRPTATELLNS 871 (1351)
T ss_pred hcCCCccCCCHHHHhhc
Confidence 99999999999999864
|
|
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-27 Score=254.03 Aligned_cols=247 Identities=22% Similarity=0.257 Sum_probs=175.6
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC------Ce
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG------RH 531 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 531 (736)
.+|.+.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.++++++||||+++++++... ..
T Consensus 17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (345)
T cd07877 17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 96 (345)
T ss_pred CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccccc
Confidence 5677788999999999999984 568899999996532 2345678899999999999999999988653 34
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.++++|++ +++|.+++... .+++..+..++.|+++||+|||+.+ ..+||+|||+++.....
T Consensus 97 ~~lv~~~~-~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~- 173 (345)
T cd07877 97 VYLVTHLM-GADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE- 173 (345)
T ss_pred EEEEehhc-ccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccccc-
Confidence 67888887 78998887654 5899999999999999999999763 36899999999765332
Q ss_pred CcceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHH-------HHHHH
Q 041821 596 NSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR-------EVKRK 667 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~ 667 (736)
.....++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ......+.. .....
T Consensus 174 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T cd07877 174 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-----IDQLKLILRLVGTPGAELLKK 244 (345)
T ss_pred ----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHHhh
Confidence 233568899999999876 5688999999999999999999999863221 111111100 00000
Q ss_pred HhhhccccccccccCccCCCC---CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 668 ILYEEEAWIEEIVDPRLKGKF---NTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 668 ~~~~~~~~~~~~~d~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+...........+.......+ .......+.+++.+|++.||.+||++.+++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 245 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred cccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000000000000000000000 00124568899999999999999999999976
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-27 Score=255.59 Aligned_cols=247 Identities=22% Similarity=0.256 Sum_probs=177.5
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe------
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH------ 531 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 531 (736)
..|.+.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07851 15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD 94 (343)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence 45778889999999999999964 5789999998643 2233557789999999999999999998876554
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.++|+||+ +++|.+++.. ..+++..+..++.|+++||.|||+.+ ..+||+|||++......
T Consensus 95 ~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~- 171 (343)
T cd07851 95 VYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE- 171 (343)
T ss_pred EEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc-
Confidence 89999999 5799998865 46999999999999999999999763 36899999999865432
Q ss_pred CcceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHH-------HHHH
Q 041821 596 NSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVRE-------VKRK 667 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~ 667 (736)
.....++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ......+... ...+
T Consensus 172 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~ 242 (343)
T cd07851 172 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH-----IDQLKRIMNLVGTPDEELLQK 242 (343)
T ss_pred ----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHhcCCCCHHHHhh
Confidence 233467889999999865 3678999999999999999999999863211 1111111000 0000
Q ss_pred HhhhccccccccccCccCCCC---CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 668 ILYEEEAWIEEIVDPRLKGKF---NTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 668 ~~~~~~~~~~~~~d~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+.......+...+........ .......+.+++.+||+.||++|||+.+|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 243 ISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred ccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000000000000000000000 01125678999999999999999999999875
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-27 Score=271.06 Aligned_cols=128 Identities=22% Similarity=0.238 Sum_probs=113.1
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|.+.++||+|+||.||+|+.. +++.||||+++... .....+..|+.+++.++||||+++++++......+|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 45778899999999999999964 58999999996532 22356888999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCccc
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAK 589 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~ 589 (736)
||+++++|.+++.....+++..++.|+.||+.||.|||..+ ..+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999987778899999999999999999999763 378999999986
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-27 Score=213.59 Aligned_cols=246 Identities=22% Similarity=0.256 Sum_probs=179.4
Q ss_pred hhcccccCeeceeEEEEee-eCCCcEEEEEEeCccccc---HHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 464 KSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
|.-.++||+|.||+|++|+ ...++.||+|++...... ....++|+-+|+.+.|+|||++++....++...+|+|||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c 83 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence 4456789999999999999 455899999998654322 356789999999999999999999999999999999999
Q ss_pred CCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceeec
Q 041821 540 EKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 540 ~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
. .+|..+... ++.++.+..+.++.|+++||.|.|++ ++.+||+|||+++.++-.-. -...
T Consensus 84 d-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvr--cysa 160 (292)
T KOG0662|consen 84 D-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR--CYSA 160 (292)
T ss_pred h-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceE--eeec
Confidence 5 677777655 44799999999999999999999965 55889999999998765432 2455
Q ss_pred ccccCcccChhcccCCC-CccccceechhHHHHHHHhCC-CCCCccccCCccchhHHHHHHHHHHHHHhhhcccc--ccc
Q 041821 603 IRGTKGYMAPEWASNLP-ITAKVDVYSYGVVILEMVKGI-RLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW--IEE 678 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 678 (736)
.+-|..|++|.++.+.. |++..|+||-||++.|+.... +.|.... ....+.++....-. ..+..| +..
T Consensus 161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~d-----vddqlkrif~~lg~---p~ed~wps~t~ 232 (292)
T KOG0662|consen 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-----VDDQLKRIFRLLGT---PTEDQWPSMTK 232 (292)
T ss_pred eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCc-----HHHHHHHHHHHhCC---CccccCCcccc
Confidence 67799999999988754 899999999999999998754 4444221 11222222221110 111111 222
Q ss_pred cccCccCCCCC---------HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 679 IVDPRLKGKFN---------TNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 679 ~~d~~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+-|-..-+.++ +.....-.+++.+.+.-+|.+|.++++.+++
T Consensus 233 lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 233 LPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 22222211121 1222345778888889999999999998875
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=239.26 Aligned_cols=269 Identities=19% Similarity=0.260 Sum_probs=208.2
Q ss_pred hhhccccccccHHHHHH-hhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcccccHHHHHHHHHHHhcCC-----C-
Q 041821 445 QALSSQFRRFSYAELKK-STKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-----H- 516 (736)
Q Consensus 445 ~~~~~~~~~~~~~~i~~-~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----h- 516 (736)
.+..+++......|... .+|.+.++||-|.|++||++. ..+.+.||+|+.+......+..+.||++|++++ |
T Consensus 60 dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~ 139 (590)
T KOG1290|consen 60 DYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDP 139 (590)
T ss_pred hhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 34556777788888877 999999999999999999999 455789999999887777788889999999984 3
Q ss_pred --CceeeEEEEEEe----CCeEEEEEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcC------------
Q 041821 517 --MNLVRMWGFCSE----GRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHD------------ 576 (736)
Q Consensus 517 --~niv~l~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~------------ 576 (736)
.+||+|++.|.. +.+++||+|++ |-+|..+|.... .++...+++|+.||+.||.|||.+
T Consensus 140 ~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPEN 218 (590)
T KOG1290|consen 140 GKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPEN 218 (590)
T ss_pred CCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcce
Confidence 469999999975 56899999999 678888887543 699999999999999999999942
Q ss_pred --------------------------------------------------------------------------------
Q 041821 577 -------------------------------------------------------------------------------- 576 (736)
Q Consensus 577 -------------------------------------------------------------------------------- 576 (736)
T Consensus 219 vLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~ 298 (590)
T KOG1290|consen 219 VLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEP 298 (590)
T ss_pred eeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 041821 577 -------------------------------------------------------------------------------- 576 (736)
Q Consensus 577 -------------------------------------------------------------------------------- 576 (736)
T Consensus 299 ~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~ 378 (590)
T KOG1290|consen 299 NQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNP 378 (590)
T ss_pred cccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCcccccccc
Confidence
Q ss_pred -----------CCccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCc
Q 041821 577 -----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNW 645 (736)
Q Consensus 577 -----------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~ 645 (736)
++++||+|||-|..... +++.-+.|..|+|||++.+..|++.+|||||+|+++||+||-..|+.
T Consensus 379 ~v~p~~~~~~~di~vKIaDlGNACW~~k-----hFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFeP 453 (590)
T KOG1290|consen 379 LVNPDIPLPECDIRVKIADLGNACWVHK-----HFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEP 453 (590)
T ss_pred ccCCCCCCCccceeEEEeeccchhhhhh-----hhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecC
Confidence 11568999999886543 25556789999999999999999999999999999999999999987
Q ss_pred cccCCccchhH----HHHHHHHHHHHHhhhccccccccccC----------cc---------CCCCCHHHHHHHHHHHHH
Q 041821 646 VVEDGEGQEAE----LKRFVREVKRKILYEEEAWIEEIVDP----------RL---------KGKFNTNQAATLIGIGIS 702 (736)
Q Consensus 646 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~d~----------~~---------~~~~~~~~~~~l~~li~~ 702 (736)
...+.-...++ +..+...+.+++.-+..- -.++++. .. .-.++.++..++.+++.-
T Consensus 454 hsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~-SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~P 532 (590)
T KOG1290|consen 454 HSGENYSRDEDHIALIMELLGKIPRKIALGGKY-SRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSP 532 (590)
T ss_pred CCCCCCCccHHHHHHHHHHHhhccHHHHhcCcc-hHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 65544333332 223333333333221100 1111111 00 123677888999999999
Q ss_pred cccCCCCCCCCHHHHHHH
Q 041821 703 CVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 703 cl~~dP~~RPs~~evl~~ 720 (736)
||+.+|++||||.+.+++
T Consensus 533 mLef~PeKR~tA~~cl~h 550 (590)
T KOG1290|consen 533 MLEFDPEKRPTAAQCLKH 550 (590)
T ss_pred HHhcCccccccHHHHhcC
Confidence 999999999999999976
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.7e-27 Score=237.09 Aligned_cols=203 Identities=15% Similarity=0.080 Sum_probs=160.1
Q ss_pred eceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCHhhhcccC
Q 041821 473 GGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS 551 (736)
Q Consensus 473 G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 551 (736)
|.||.||+++. .+++.+|+|++..... +.+|...+....||||+++++++.+.+..++||||+++|+|.+++...
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 79 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF 79 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh----hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh
Confidence 88999999995 4688999999965432 334555566667999999999999999999999999999999999877
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceeecccccCcccChhcc
Q 041821 552 YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615 (736)
Q Consensus 552 ~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~ 615 (736)
..+++..+..++.|++.||.|||+.++ .++|+|||.+...... .....++..|+|||.+
T Consensus 80 ~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y~aPE~~ 154 (237)
T cd05576 80 LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMYCAPEVG 154 (237)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCccccCCccc
Confidence 779999999999999999999997643 5799999988665432 2233467789999999
Q ss_pred cCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHH
Q 041821 616 SNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAAT 695 (736)
Q Consensus 616 ~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 695 (736)
....++.++||||+|+++|||++|+.|+...... ...... ...+......
T Consensus 155 ~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~--------------------------~~~~~~----~~~~~~~~~~ 204 (237)
T cd05576 155 GISEETEACDWWSLGAILFELLTGKTLVECHPSG--------------------------INTHTT----LNIPEWVSEE 204 (237)
T ss_pred CCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh--------------------------cccccc----cCCcccCCHH
Confidence 8888999999999999999999998876421100 000000 0122233467
Q ss_pred HHHHHHHcccCCCCCCCCH
Q 041821 696 LIGIGISCVDEDRSKRPTM 714 (736)
Q Consensus 696 l~~li~~cl~~dP~~RPs~ 714 (736)
+.+++.+|++.||++||++
T Consensus 205 ~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 205 ARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHHHHHccCCHHHhcCC
Confidence 8899999999999999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.5e-27 Score=249.24 Aligned_cols=224 Identities=22% Similarity=0.223 Sum_probs=179.2
Q ss_pred hhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
+.|++...+|.|+|+.|.++. ..+++..+||++.+... ...+|+.++... +||||+++.+.+.++.+.++|||++
T Consensus 322 ~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~---~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l 398 (612)
T KOG0603|consen 322 ESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD---DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELL 398 (612)
T ss_pred hhhccccccCCCCccceeeeeccccccchhheecccccc---ccccccchhhhhcCCCcceeecceecCCceeeeeehhc
Confidence 567788889999999999998 45588999999976521 223567666555 6999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-----------------ccEEcccCcccccCCCCCcceeec
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-----------------EPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-----------------~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
.++.|.+.+....... .++..|+.+|+.++.|||++++ +++|+|||.++..... ..+
T Consensus 399 ~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-----~~t 472 (612)
T KOG0603|consen 399 DGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-----CDT 472 (612)
T ss_pred cccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-----hcc
Confidence 9999998887765444 7888899999999999997632 5899999999977654 334
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
.+-|..|.|||++....|++++||||||++||||++|+.||.....+ ..+...+..
T Consensus 473 p~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~------------~ei~~~i~~------------ 528 (612)
T KOG0603|consen 473 PALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG------------IEIHTRIQM------------ 528 (612)
T ss_pred cchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch------------HHHHHhhcC------------
Confidence 45688999999999999999999999999999999999999744221 111111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
+.+....+....+|+.+||+.||.+||+|.++..+=
T Consensus 529 ---~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~ 564 (612)
T KOG0603|consen 529 ---PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHP 564 (612)
T ss_pred ---CccccccCHHHHHHHHHhccCChhhCcChhhhccCc
Confidence 122345567889999999999999999999998763
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.7e-26 Score=229.88 Aligned_cols=222 Identities=25% Similarity=0.269 Sum_probs=175.4
Q ss_pred ceeEEEEeeeC-CCcEEEEEEeCcccc-c-HHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCHhhhccc
Q 041821 474 GSGAVYKGVLA-DGRAVAVKRLGDLHQ-G-EEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS 550 (736)
Q Consensus 474 ~fg~Vy~~~~~-~~~~vavK~~~~~~~-~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 550 (736)
+||.||+|+.. +++.+|+|++..... . .+.+.+|++.+++++|+||+++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999965 489999999975432 2 57899999999999999999999999999999999999999999999977
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccccCcccChhc
Q 041821 551 SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW 614 (736)
Q Consensus 551 ~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~ 614 (736)
...+++..+..++.+++++|.|||+.+ ..++|+|||.+....... ......++..|+|||.
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEV 157 (244)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCCCCHHH
Confidence 666899999999999999999999753 378999999998765542 2344568899999999
Q ss_pred ccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHH
Q 041821 615 ASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAA 694 (736)
Q Consensus 615 ~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 694 (736)
+....++.++||||||++++||++|..|+..... ........ .... ... .........
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~--------~~~~~~~~----~~~~-------~~~---~~~~~~~~~ 215 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ--------LLELFKKI----GKPK-------PPF---PPPEWKISP 215 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--------HHHHHHHH----hccC-------CCC---ccccccCCH
Confidence 9888899999999999999999999999863210 01111111 0000 000 000000346
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 695 TLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 695 ~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+.+++.+|+..+|++||++.+++++
T Consensus 216 ~~~~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 216 EAKDLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred HHHHHHHHHccCCchhccCHHHHhhC
Confidence 78899999999999999999999873
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.1e-28 Score=247.82 Aligned_cols=235 Identities=20% Similarity=0.183 Sum_probs=190.0
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCCC-cEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLADG-RAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
+.....+.+..||-|+||.|-++..... ..+|+|.+++. ...++.+..|-.+|...+.|.||++|-.|.++...|
T Consensus 417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY 496 (732)
T KOG0614|consen 417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY 496 (732)
T ss_pred cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence 3444455667899999999999986543 34899998763 234566789999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~ 597 (736)
++||-|-||.|...|+.++.++...+.-++..+++|++|||++++ -+||.|||+|+.+..+..
T Consensus 497 mLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K- 575 (732)
T KOG0614|consen 497 MLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK- 575 (732)
T ss_pred hhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCc-
Confidence 999999999999999999999999999999999999999998754 579999999999987654
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
+-+.+||+.|.|||++.++..+.++|.||+|+++|||++|.+||....+.. ..+++- .
T Consensus 576 --TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk------tYn~IL-------k------- 633 (732)
T KOG0614|consen 576 --TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK------TYNLIL-------K------- 633 (732)
T ss_pred --eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH------HHHHHH-------h-------
Confidence 567899999999999999999999999999999999999999998543211 111111 1
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT-----MDSVVQS 720 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 720 (736)
-+| .-.+|........+|+++....+|.+|.- +.+|.+|
T Consensus 634 -Gid---~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 634 -GID---KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred -hhh---hhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 111 11234445567778888999999999975 6666665
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-26 Score=221.85 Aligned_cols=230 Identities=21% Similarity=0.320 Sum_probs=175.1
Q ss_pred hcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEEEEecCC
Q 041821 465 SFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 465 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
++...||.|..|.|++++.+ .|..+|||.+.+.. +..++++..+.++.+-+ .|.||+.+|+|..+...+|.||.|.
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs 174 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS 174 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH
Confidence 45678999999999999954 58999999997643 44567788888777664 8999999999999999999999985
Q ss_pred CCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEcccCcccccCCCCCcceeec
Q 041821 541 KQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 541 ~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
.-++.++++ .+++++..+-++...+++||.||-++ .+++||+|||++..+-.... .+.
T Consensus 175 -~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA---htr 250 (391)
T KOG0983|consen 175 -TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA---HTR 250 (391)
T ss_pred -HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccc---ccc
Confidence 344555544 34788888889999999999999543 45899999999976654332 445
Q ss_pred ccccCcccChhccc---CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 603 IRGTKGYMAPEWAS---NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 603 ~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
..|.+.|||||.+. ...|+.++||||||++|+||.||+.||.....+ +.-+ .++.. -
T Consensus 251 sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-------Fe~l-----tkvln--------~ 310 (391)
T KOG0983|consen 251 SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-------FEVL-----TKVLN--------E 310 (391)
T ss_pred ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-------HHHH-----HHHHh--------c
Confidence 67999999999986 345899999999999999999999999754322 1111 11111 1
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..|.+... ...+..+.+++..||+.|+.+||...++++|
T Consensus 311 ePP~L~~~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 311 EPPLLPGH--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CCCCCCcc--cCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 11222211 1246788999999999999999999999876
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-26 Score=224.58 Aligned_cols=231 Identities=18% Similarity=0.220 Sum_probs=179.2
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 535 (736)
.++.+.++||+|+|++|.++++ ++.+.+|+|++++.- +..+-...|-.+..+. +||.+|.++.+|+.....++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 4567788999999999999995 457889999997632 2223345666666655 699999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcce
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~ 599 (736)
.||+++|+|.-++.+++.++++.++-+...|+.||.|||++++ .+||+|+|+++.--.... .
T Consensus 330 ieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd--~ 407 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGD--T 407 (593)
T ss_pred EEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCc--c
Confidence 9999999999999999999999999999999999999998754 789999999985433332 3
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
+.+.+||+.|+|||++.+..|+..+|.|++||+++||+.|+.||+..-.+.. ......+.-. -+
T Consensus 408 tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~--d~ntedylfq--------------vi 471 (593)
T KOG0695|consen 408 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNP--DMNTEDYLFQ--------------VI 471 (593)
T ss_pred cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCc--ccchhHHHHH--------------HH
Confidence 6678999999999999999999999999999999999999999986532211 1111111111 11
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP 712 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 712 (736)
+...+ ..|...+.+...++..-|..||.+|.
T Consensus 472 lekqi--riprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 472 LEKQI--RIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred hhhcc--cccceeehhhHHHHHHhhcCCcHHhc
Confidence 11111 12334445666778888999999985
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.6e-27 Score=261.09 Aligned_cols=237 Identities=21% Similarity=0.147 Sum_probs=188.3
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCc---c-cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGD---L-HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~---~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
.+.+++|.+.+.||+|+||.|..++.+ .++.+|+|++++ . .....-|+.|-.+|..-+.+-|+.++-.|++.+++
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 346788999999999999999999954 588999999977 2 23345688899999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~ 596 (736)
|+|||||+||+|..++.+..++++..++.++..|+.||.-||+- .+++||+|||.+..+..+..
T Consensus 151 YlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~ 230 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGT 230 (1317)
T ss_pred EEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCc
Confidence 99999999999999998877899999999999999999888843 44899999999988776544
Q ss_pred cceeecccccCcccChhccc----C-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 597 SSQFSQIRGTKGYMAPEWAS----N-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
. .....+|||.|++||++. + +.|+..+|.||+||++|||+.|..||+... ++.. ..+
T Consensus 231 V-~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads------------lveT-Y~K---- 292 (1317)
T KOG0612|consen 231 V-RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS------------LVET-YGK---- 292 (1317)
T ss_pred E-EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH------------HHHH-HHH----
Confidence 3 255678999999999985 3 569999999999999999999999998331 1111 111
Q ss_pred ccccccccccCccCCCCC--HHHHHHHHHHHHHcccCCCCCCCC---HHHHHHH
Q 041821 672 EEAWIEEIVDPRLKGKFN--TNQAATLIGIGISCVDEDRSKRPT---MDSVVQS 720 (736)
Q Consensus 672 ~~~~~~~~~d~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~ 720 (736)
+++..-.-.+| ...++...+||.+.+. +|+.|.. +.++..|
T Consensus 293 -------Im~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 293 -------IMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred -------HhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 11111111122 3356678888888775 6888887 8888776
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.9e-27 Score=220.42 Aligned_cols=254 Identities=21% Similarity=0.275 Sum_probs=176.6
Q ss_pred hhhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCc--ccc-cHHHHHHHHHHHhcCCCCceeeEEEEEEe--------C
Q 041821 462 STKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGD--LHQ-GEEVFWAEVSTIGKIYHMNLVRMWGFCSE--------G 529 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~--~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~ 529 (736)
..|+-..+||+|.||+||+|+.++ ++.||+|++-- ... -....++|+.+|..+.|+|++.++..|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 345556689999999999999554 77889887621 111 22446799999999999999999988853 2
Q ss_pred CeEEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccC
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQ 592 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~ 592 (736)
...++|+.+|+ .+|..+|.... .++..++.+++.++..||.|+|+. +..+||+|||+++.+.
T Consensus 97 ~t~ylVf~~ce-hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 97 ATFYLVFDFCE-HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFS 175 (376)
T ss_pred ceeeeeHHHhh-hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccccccee
Confidence 34799999997 68888887653 799999999999999999999964 4578999999997664
Q ss_pred CCCCc--ceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 593 RGSNS--SQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 593 ~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
..... ...+..+-|..|++||.+.+. .|+++.|||.-|||+.||.+|.+.+....+.. ...++......+.
T Consensus 176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqq------ql~~Is~LcGs~t 249 (376)
T KOG0669|consen 176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQ------QLHLISQLCGSIT 249 (376)
T ss_pred cccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHH------HHHHHHHHhccCC
Confidence 43322 234556679999999998864 59999999999999999999998876443211 1112111111110
Q ss_pred hh-----ccccccccc--cCccCCCC--CHHH------HHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 670 YE-----EEAWIEEIV--DPRLKGKF--NTNQ------AATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 670 ~~-----~~~~~~~~~--d~~~~~~~--~~~~------~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
.. +.-.+.+-+ .|-..... -.+. ....++|+.+++..||.+||.+++++.+--
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~ 317 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDF 317 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence 00 000000001 00000000 0111 135678999999999999999999987643
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-26 Score=219.59 Aligned_cols=241 Identities=22% Similarity=0.289 Sum_probs=176.7
Q ss_pred cccccHHHHHHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEE
Q 041821 451 FRRFSYAELKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFC 526 (736)
Q Consensus 451 ~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 526 (736)
...|+..+++. ...||.|+||+|+|-.+ +.|+..|||++.... ..+++++.|.....+- +.||||+++|.+
T Consensus 58 ~~~F~~~~Lqd-----lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~ 132 (361)
T KOG1006|consen 58 LHTFTSDNLQD-----LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGAL 132 (361)
T ss_pred ccccccchHHH-----HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhh
Confidence 34455444443 34799999999999985 459999999997543 4567788888865554 799999999999
Q ss_pred EeCCeEEEEEecCCCCCHhhhccc-----CCCCCHHHHHHHHHHHHHHhhhhhc-----------------CCCccEEcc
Q 041821 527 SEGRHRLLIYEYVEKQSLDKHLFS-----SYFLGWKERFKVALGTAKGLAYLHH-----------------DEFEPKIAD 584 (736)
Q Consensus 527 ~~~~~~~lv~e~~~~gsL~~~l~~-----~~~l~~~~~~~i~~~i~~gL~yLH~-----------------~~~~~kl~D 584 (736)
..++..||.||.|. -||+.+.+. ...+++...-.|....++||.||-. +.+.+||+|
T Consensus 133 F~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCD 211 (361)
T KOG1006|consen 133 FSEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCD 211 (361)
T ss_pred hcCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeec
Confidence 99999999999995 777766542 3368888888888889999999852 245789999
Q ss_pred cCcccccCCCCCcceeecccccCcccChhcccC--CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHH
Q 041821 585 FGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN--LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR 662 (736)
Q Consensus 585 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 662 (736)
||++..+... ...+...|...|||||.+.. ..|+.+|||||||++|||+.||+.|+..- ....+
T Consensus 212 FGIcGqLv~S---iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w-----------~svfe 277 (361)
T KOG1006|consen 212 FGICGQLVDS---IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW-----------DSVFE 277 (361)
T ss_pred ccchHhHHHH---HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH-----------HHHHH
Confidence 9999765432 22455679999999999863 35899999999999999999999998621 11111
Q ss_pred HHHHHHhhhccccccccccCccCCC-CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 663 EVKRKILYEEEAWIEEIVDPRLKGK-FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+. .+..++ .|.+... ...+....+.+++..|+..|..+||...+++++
T Consensus 278 ql~-~Vv~gd--------pp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 278 QLC-QVVIGD--------PPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHH-HHHcCC--------CCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 111 111111 1111111 123355678899999999999999999988754
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=239.74 Aligned_cols=247 Identities=17% Similarity=0.130 Sum_probs=161.9
Q ss_pred HHhhhhcccccCeeceeEEEEeee-----------------CCCcEEEEEEeCccccc-HH--------------HHHHH
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVL-----------------ADGRAVAVKRLGDLHQG-EE--------------VFWAE 507 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~-----------------~~~~~vavK~~~~~~~~-~~--------------~~~~E 507 (736)
..+.|.+.++||+|+||.||+|.. ..++.||||++....+. .+ ....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 355788889999999999999963 23567999998643321 12 23447
Q ss_pred HHHHhcCCCCce-----eeEEEEEEe--------CCeEEEEEecCCCCCHhhhcccC-----------------------
Q 041821 508 VSTIGKIYHMNL-----VRMWGFCSE--------GRHRLLIYEYVEKQSLDKHLFSS----------------------- 551 (736)
Q Consensus 508 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~----------------------- 551 (736)
+.++.+++|.++ ++++++|.. ....+|||||+++++|.++++..
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777776654 677887753 35679999999999999988632
Q ss_pred -CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecccccCcccChhc
Q 041821 552 -YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW 614 (736)
Q Consensus 552 -~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~ 614 (736)
..+++..+..++.|+++||.|||+.+ ..+||+|||+++......... .....+|+.|+|||.
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~-~~~g~~tp~Y~aPE~ 381 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFN-PLYGMLDPRYSPPEE 381 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccC-ccccCCCcceeChhh
Confidence 12467788999999999999999753 368999999997654332211 122335789999998
Q ss_pred ccCCC--------------------C--ccccceechhHHHHHHHhCCC-CCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 615 ASNLP--------------------I--TAKVDVYSYGVVILEMVKGIR-LSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 615 ~~~~~--------------------~--~~~~DvwS~Gvvl~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
+.... + ..+.||||+||+++||+++.. |+......... ......... .++.....
T Consensus 382 l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~-~~~~~~~~~-~~r~~~~~ 459 (507)
T PLN03224 382 LVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTE-LRQYDNDLN-RWRMYKGQ 459 (507)
T ss_pred hcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhH-HhhccchHH-HHHhhccc
Confidence 75322 1 124799999999999999874 55321100000 000000000 00111000
Q ss_pred ccccccccccCccCCCCCHHHHHHHHHHHHHcccCCC---CCCCCHHHHHHH
Q 041821 672 EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDR---SKRPTMDSVVQS 720 (736)
Q Consensus 672 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~~ 720 (736)
...-...........+|+.++|..+| .+|+|++|+++|
T Consensus 460 -----------~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 460 -----------KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred -----------CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 01111112234678889999999766 689999999987
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-26 Score=218.95 Aligned_cols=250 Identities=18% Similarity=0.239 Sum_probs=181.6
Q ss_pred cccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC-----eEEEEE
Q 041821 466 FKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR-----HRLLIY 536 (736)
Q Consensus 466 ~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~ 536 (736)
-.+.||-|+||.||..+. ++|+.||+|++.... ...+.+.+|+++|..++|.|++..++...... +.|+++
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 346799999999999994 569999999996533 33467889999999999999999998876543 457899
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|.|. .+|...|-....++.+.++-++.||++||.|||+.++ .+||+|||+|+....++.. .+
T Consensus 137 ELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~-hM 214 (449)
T KOG0664|consen 137 ELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL-NM 214 (449)
T ss_pred HHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhh-hh
Confidence 9995 7899998888899999999999999999999996532 5799999999977665443 46
Q ss_pred ecccccCcccChhcccCCC-CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHH----HHHHHHHHhhhcccc
Q 041821 601 SQIRGTKGYMAPEWASNLP-ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRF----VREVKRKILYEEEAW 675 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 675 (736)
+..+-|..|+|||++.+.+ |+.++||||.|||+.||+-++..|....+-.+ ...+..+ ..+..+.-.++.
T Consensus 215 TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQ--L~lItdLLGTPs~EaMr~ACEGA--- 289 (449)
T KOG0664|consen 215 THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQ--LQMIIDLLGTPSQEAMKYACEGA--- 289 (449)
T ss_pred HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHH--HHHHHHHhCCCcHHHHHHHhhhh---
Confidence 7778899999999999765 99999999999999999999888874432111 1111111 011111111111
Q ss_pred ccccccCccCCC---------CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 676 IEEIVDPRLKGK---------FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 676 ~~~~~d~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
-..++....+.. .+.........+..+++..||++|.+..+.+.++.
T Consensus 290 k~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 290 KNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred HHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 111121111111 11122234566778899999999999999888764
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-25 Score=206.37 Aligned_cols=248 Identities=15% Similarity=0.238 Sum_probs=183.3
Q ss_pred HhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcccccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCC--eEEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGR--HRLLIY 536 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~~lv~ 536 (736)
.+.|++.+++|+|.|++|+.|. ..+.+.++||+++... .+.+.+|+.+|..|. ||||+++++...++. .+.||+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF 114 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF 114 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence 4678899999999999999999 6678999999997643 345789999999997 999999999998754 457999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-----------------ccEEcccCcccccCCCCCcce
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-----------------EPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-----------------~~kl~DFGla~~~~~~~~~~~ 599 (736)
||+.+.+...+. ..++-..+..++.++++||.|+|+.++ +++|+|.|+|.+..++..
T Consensus 115 E~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~e--- 188 (338)
T KOG0668|consen 115 EYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--- 188 (338)
T ss_pred hhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCce---
Confidence 999988877654 347778889999999999999998754 679999999999887665
Q ss_pred eecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH--------HHHhh
Q 041821 600 FSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK--------RKILY 670 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 670 (736)
..-.+.+..|..||.+.+- .|+..-|+|||||+|.+|+..+.||.....+.++. ..+..-.- .+..-
T Consensus 189 YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQL----VkIakVLGt~el~~Yl~KY~i 264 (338)
T KOG0668|consen 189 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL----VKIAKVLGTDELYAYLNKYQI 264 (338)
T ss_pred eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHH----HHHHHHhChHHHHHHHHHHcc
Confidence 3345678889999998764 48999999999999999999999998665443322 11111110 01000
Q ss_pred hccccccccccCccCCC-------CCH-HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 671 EEEAWIEEIVDPRLKGK-------FNT-NQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 671 ~~~~~~~~~~d~~~~~~-------~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.-...+..++....+.. ... -...+.++++.+.|..|.++|||+.|.+.|
T Consensus 265 ~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 265 DLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred CCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 00000111111111111 011 113577889999999999999999998865
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-24 Score=245.58 Aligned_cols=244 Identities=21% Similarity=0.192 Sum_probs=151.7
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-C----CcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEE------EEeC
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-D----GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGF------CSEG 529 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~~~~ 529 (736)
.+.|.+.+.||+|+||.||+|+.. + +..||||++......+ ....| .+....+.+++.++.. ...+
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e-~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~ 207 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVE-IWMNE--RVRRACPNSCADFVYGFLEPVSSKKE 207 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhH-HHHHH--HHHhhchhhHHHHHHhhhcccccccC
Confidence 456788899999999999999954 4 6899999986432211 11111 1222222222222211 2456
Q ss_pred CeEEEEEecCCCCCHhhhcccCC-C-------------------CCHHHHHHHHHHHHHHhhhhhcCC------------
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSSY-F-------------------LGWKERFKVALGTAKGLAYLHHDE------------ 577 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~~-~-------------------l~~~~~~~i~~~i~~gL~yLH~~~------------ 577 (736)
...+|||||+++++|.+++.... . .....+..++.||+.||.|||+.+
T Consensus 208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NIL 287 (566)
T PLN03225 208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNII 287 (566)
T ss_pred CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEE
Confidence 78899999999999999886532 1 112345679999999999999652
Q ss_pred -----CccEEcccCcccccCCCCCcceeecccccCcccChhcccCC----------------------CCccccceechh
Q 041821 578 -----FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL----------------------PITAKVDVYSYG 630 (736)
Q Consensus 578 -----~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~DvwS~G 630 (736)
..+||+|||+|+.+...... ......+++.|||||.+... .++.++||||||
T Consensus 288 l~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlG 366 (566)
T PLN03225 288 FSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAG 366 (566)
T ss_pred EeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHH
Confidence 36899999999866443322 13456789999999965422 234567999999
Q ss_pred HHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCC----C--CHHHHHHHHHHHHHcc
Q 041821 631 VVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGK----F--NTNQAATLIGIGISCV 704 (736)
Q Consensus 631 vvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~--~~~~~~~l~~li~~cl 704 (736)
|+||||+++..++... ...+...+... ...... ....+.+..... + .........+|+.+||
T Consensus 367 viL~el~~~~~~~~~~----------~~~~~~~l~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 367 LIFLQMAFPNLRSDSN----------LIQFNRQLKRN-DYDLVA-WRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred HHHHHHHhCcCCCchH----------HHHHHHHHHhc-CCcHHH-HHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence 9999999876554311 11111111100 000000 001111110000 0 0011234568999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 041821 705 DEDRSKRPTMDSVVQS 720 (736)
Q Consensus 705 ~~dP~~RPs~~evl~~ 720 (736)
+.||++|||+.++++|
T Consensus 435 ~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 435 RFKGRQRISAKAALAH 450 (566)
T ss_pred cCCcccCCCHHHHhCC
Confidence 9999999999999987
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-25 Score=241.05 Aligned_cols=224 Identities=28% Similarity=0.343 Sum_probs=168.9
Q ss_pred cccCeecee-EEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEecCCCCCHh
Q 041821 468 EELGRGGSG-AVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLD 545 (736)
Q Consensus 468 ~~lG~G~fg-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 545 (736)
+.+|.|+-| .||+|.. .++.||||++-.. ......+|+..|+.- .|||||++++.-.+..+.||..|.|. .+|+
T Consensus 515 eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e--~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~sL~ 590 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGVY-EGREVAVKRLLEE--FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-CSLQ 590 (903)
T ss_pred HHcccCCCCcEEEEEee-CCceehHHHHhhH--hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-hhHH
Confidence 468999988 5899998 5789999998432 223456899999988 59999999999999999999999995 8999
Q ss_pred hhcccCC----CCCHHHHHHHHHHHHHHhhhhhcCC---------------------CccEEcccCcccccCCCCCcc-e
Q 041821 546 KHLFSSY----FLGWKERFKVALGTAKGLAYLHHDE---------------------FEPKIADFGLAKLSQRGSNSS-Q 599 (736)
Q Consensus 546 ~~l~~~~----~l~~~~~~~i~~~i~~gL~yLH~~~---------------------~~~kl~DFGla~~~~~~~~~~-~ 599 (736)
+++.... ...-.....+..|+++||++||+-+ ..++|+|||+++.+..+..+- .
T Consensus 591 dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r 670 (903)
T KOG1027|consen 591 DLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSR 670 (903)
T ss_pred HHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhc
Confidence 9998741 1111345778999999999999532 367999999999887765443 3
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhC-CCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG-IRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....||-+|+|||++....-+.++||+|+||++|..++| ..||......+. + +..+... +..
T Consensus 671 ~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~-------N--------Il~~~~~-L~~ 734 (903)
T KOG1027|consen 671 LSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA-------N--------ILTGNYT-LVH 734 (903)
T ss_pred ccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh-------h--------hhcCccc-eee
Confidence 4567899999999999998888899999999999999987 788864321110 0 1111000 000
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+.+ ..++ ...+||.+|++.+|..||++.+|+.|
T Consensus 735 -L~~------~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 735 -LEP------LPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred -ecc------CchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 000 1111 67789999999999999999999853
|
|
| >cd00028 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.8e-24 Score=188.18 Aligned_cols=100 Identities=46% Similarity=0.762 Sum_probs=90.5
Q ss_pred CceEeeeEecCCCC-eEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCC-CCcceEE
Q 041821 1 KTFSCGFYGLGGNA-YLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTS-TGADRAE 78 (736)
Q Consensus 1 ~~F~~GF~~~~~~~-~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~-~~~~~a~ 78 (736)
+.|++|||.+.... .+.+|||.+.+ +++||.||++.|. ...+.|.|+.+|+|+|.|.+|.++|++++.+ .....|+
T Consensus 15 ~~f~~G~~~~~~q~~dgnlv~~~~~~-~~~vW~snt~~~~-~~~~~l~l~~dGnLvl~~~~g~~vW~S~~~~~~~~~~~~ 92 (116)
T cd00028 15 SLFELGFFKLIMQSRDYNLILYKGSS-RTVVWVANRDNPS-GSSCTLTLQSDGNLVIYDGSGTVVWSSNTTRVNGNYVLV 92 (116)
T ss_pred CcEEEecccCCCCCCeEEEEEEeCCC-CeEEEECCCCCCC-CCCEEEEEecCCCeEEEcCCCcEEEEecccCCCCceEEE
Confidence 57999999987775 99999998876 7899999999984 4678999999999999999999999999875 5567899
Q ss_pred EccCCCeEEEccCCceeeeecCCC
Q 041821 79 LLDTGNLVLKDRHGKILWQSFDYP 102 (736)
Q Consensus 79 LldsGNlVl~~~~~~~lWqSFd~P 102 (736)
|+|+|||||++.++.+||||||||
T Consensus 93 L~ddGnlvl~~~~~~~~W~Sf~~P 116 (116)
T cd00028 93 LLDDGNLVLYDSDGNFLWQSFDYP 116 (116)
T ss_pred EeCCCCEEEECCCCCEEEcCCCCC
Confidence 999999999999999999999999
|
The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-24 Score=223.12 Aligned_cols=267 Identities=20% Similarity=0.201 Sum_probs=196.2
Q ss_pred cccccccHHHHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCC------CCceee
Q 041821 449 SQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY------HMNLVR 521 (736)
Q Consensus 449 ~~~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~------h~niv~ 521 (736)
.++-++.+.|+...+|.+....|+|-|++|.+|... .|+.||||+|.......+.=+.|+++|++|. --|+++
T Consensus 419 EGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclr 498 (752)
T KOG0670|consen 419 EGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLR 498 (752)
T ss_pred cceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHH
Confidence 345567889999999999999999999999999954 4889999999876655566678999999995 358999
Q ss_pred EEEEEEeCCeEEEEEecCCCCCHhhhcccCC---CCCHHHHHHHHHHHHHHhhhhh------cC-----------CCccE
Q 041821 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY---FLGWKERFKVALGTAKGLAYLH------HD-----------EFEPK 581 (736)
Q Consensus 522 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~l~~~~~~~i~~~i~~gL~yLH------~~-----------~~~~k 581 (736)
|+-.|...+++|||+|-+. .+|.+.|+..+ .|....+..++.|+..||.+|- .+ ...+|
T Consensus 499 l~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLK 577 (752)
T KOG0670|consen 499 LFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILK 577 (752)
T ss_pred HHHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceee
Confidence 9999999999999999884 89999998754 5777888888888888887764 32 23679
Q ss_pred EcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccc-hhH-HHH
Q 041821 582 IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQ-EAE-LKR 659 (736)
Q Consensus 582 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~-~~~-~~~ 659 (736)
|||||.|....... .+...-+..|.|||++.+.+|+...|+||.||+||||.||+..|.....+.... ..+ ...
T Consensus 578 LCDfGSA~~~~ene----itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk 653 (752)
T KOG0670|consen 578 LCDFGSASFASENE----ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGK 653 (752)
T ss_pred eccCcccccccccc----ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCC
Confidence 99999998776543 334445678999999999999999999999999999999999998654332100 000 011
Q ss_pred HHHHHHHHHhhhc------cccc---------------cccccC------cc-----CCCCCHHHHHHHHHHHHHcccCC
Q 041821 660 FVREVKRKILYEE------EAWI---------------EEIVDP------RL-----KGKFNTNQAATLIGIGISCVDED 707 (736)
Q Consensus 660 ~~~~~~~~~~~~~------~~~~---------------~~~~d~------~~-----~~~~~~~~~~~l~~li~~cl~~d 707 (736)
++..+.++-...+ -.++ ...+.| .+ .....+.....|.+|+.+|+..|
T Consensus 654 ~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~Ld 733 (752)
T KOG0670|consen 654 FPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILD 733 (752)
T ss_pred CcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccC
Confidence 2222222111100 0010 011111 00 01123445678999999999999
Q ss_pred CCCCCCHHHHHHH
Q 041821 708 RSKRPTMDSVVQS 720 (736)
Q Consensus 708 P~~RPs~~evl~~ 720 (736)
|++|.|..++|+|
T Consensus 734 P~KRit~nqAL~H 746 (752)
T KOG0670|consen 734 PEKRITVNQALKH 746 (752)
T ss_pred hhhcCCHHHHhcC
Confidence 9999999999876
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.7e-24 Score=195.53 Aligned_cols=184 Identities=26% Similarity=0.279 Sum_probs=151.4
Q ss_pred HHHHhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCc--ccccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGD--LHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 533 (736)
++.+....-.+.||+|++|.|-+-+ ..+|+..|+|++.. ..+..++.++|+.+..+. ..|.+|+++|...+....+
T Consensus 42 eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvw 121 (282)
T KOG0984|consen 42 EVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVW 121 (282)
T ss_pred ccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEE
Confidence 3445555567789999999999988 56799999999965 345667788899876664 7999999999999999999
Q ss_pred EEEecCCCCCHhhhc----ccCCCCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEcccCcccccC
Q 041821 534 LIYEYVEKQSLDKHL----FSSYFLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADFGLAKLSQ 592 (736)
Q Consensus 534 lv~e~~~~gsL~~~l----~~~~~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~~~~ 592 (736)
|.||.|. -||+.+- ++...+++...-+|+..+.+||.|||++ ++++||+|||++..+.
T Consensus 122 IcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~ 200 (282)
T KOG0984|consen 122 ICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLV 200 (282)
T ss_pred EeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence 9999996 7887654 3455789999999999999999999964 5689999999998765
Q ss_pred CCCCcceeecccccCcccChhccc----CCCCccccceechhHHHHHHHhCCCCCCc
Q 041821 593 RGSNSSQFSQIRGTKGYMAPEWAS----NLPITAKVDVYSYGVVILEMVKGIRLSNW 645 (736)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwS~Gvvl~el~tg~~p~~~ 645 (736)
+.-. .+...|...|||||.+. ...|+.|+||||||+++.||.+++.|++.
T Consensus 201 dSiA---kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 201 DSIA---KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred hhhH---HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 4321 23356889999999875 34699999999999999999999999863
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-24 Score=231.74 Aligned_cols=236 Identities=21% Similarity=0.212 Sum_probs=186.0
Q ss_pred HhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 461 KSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+.+|++...+|.|.||.|||++ ...++..|||.++-.. .......+|+-+++..+|||||.++|.+...+..+|.|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 3567888999999999999999 5568999999997533 3445567899999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
|.+|+|++.-+..+++++.++..+.+..++||+|||+.+ ..+|++|||.+..+...- .+...
T Consensus 94 cgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati--~Krks 171 (829)
T KOG0576|consen 94 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI--AKRKS 171 (829)
T ss_pred cCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhh--hhhhc
Confidence 999999999988889999999999999999999999753 378999999987665432 23456
Q ss_pred ccccCcccChhccc---CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 603 IRGTKGYMAPEWAS---NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 603 ~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.+||+.|||||+.. .+.|..++|||+.|+...|+---++|....+.. ..+.-. ....
T Consensus 172 fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm--------r~l~Lm------------TkS~ 231 (829)
T KOG0576|consen 172 FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM--------RALFLM------------TKSG 231 (829)
T ss_pred ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH--------HHHHHh------------hccC
Confidence 78999999999864 456999999999999999999888776533211 111000 0111
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 719 (736)
.+|. .........+.+-++++.|+..+|++|||++.+++
T Consensus 232 ~qpp-~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 232 FQPP-TLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCCC-cccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1111 11123345677888999999999999999988765
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-24 Score=208.13 Aligned_cols=243 Identities=20% Similarity=0.242 Sum_probs=180.3
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
-|.....++..+|.+...|+.|+|+++ |..+++|++... ....+.|..|.-.|+.+.||||+.++|.|..+....+
T Consensus 186 gid~~~lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~ 264 (448)
T KOG0195|consen 186 GIDVSSLNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVI 264 (448)
T ss_pred CcchhhhhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceE
Confidence 344556677889999999999999994 566777887542 2334668889999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCCC---------ccEEcccCcccccCCCCC--cceee
Q 041821 535 IYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDEF---------EPKIADFGLAKLSQRGSN--SSQFS 601 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~~---------~~kl~DFGla~~~~~~~~--~~~~~ 601 (736)
+..||+.|+|...|+... ..+..++.+++.++|+|++|||+-+- +-...|=.+...+..... +-+..
T Consensus 265 isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~ 344 (448)
T KOG0195|consen 265 ISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEV 344 (448)
T ss_pred eeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeecc
Confidence 999999999999998866 57888999999999999999996421 111222222111111000 00111
Q ss_pred cccccCcccChhcccCCCCc---cccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPIT---AKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~---~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
...-.+.||+||.+...+-+ .++|+|||.+++|||.|+..||....+.+- -.+
T Consensus 345 gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec------------------------gmk 400 (448)
T KOG0195|consen 345 GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC------------------------GMK 400 (448)
T ss_pred ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh------------------------hhh
Confidence 22346899999999877644 489999999999999999999975433221 112
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
+.-..++...|+..+..+.+|+.-|+..||.+||.++.|+-.||+..
T Consensus 401 ialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 401 IALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred hhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 22233444556666778889999999999999999999999998763
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.6e-24 Score=222.96 Aligned_cols=180 Identities=20% Similarity=0.221 Sum_probs=153.9
Q ss_pred HhhhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCcccccH---------HHHHHHHHHHhcCC---CCceeeEEEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGE---------EVFWAEVSTIGKIY---HMNLVRMWGFCS 527 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~---------~~~~~E~~~l~~l~---h~niv~l~~~~~ 527 (736)
.+.|...+.||+|+||.|+.+.++. ...|+||.+.+.+.-. -.+..|++||+.++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 3456778899999999999999654 6789999986643222 12457999999997 999999999999
Q ss_pred eCCeEEEEEecC-CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccc
Q 041821 528 EGRHRLLIYEYV-EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKL 590 (736)
Q Consensus 528 ~~~~~~lv~e~~-~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~ 590 (736)
+++.+||+||-- ++-+|.++|.....+++.++.-|+.||+.|+++||+.++ -+||+|||.|..
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~ 719 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAY 719 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhh
Confidence 999999999975 456999999988899999999999999999999997643 589999999988
Q ss_pred cCCCCCcceeecccccCcccChhcccCCCC-ccccceechhHHHHHHHhCCCCCC
Q 041821 591 SQRGSNSSQFSQIRGTKGYMAPEWASNLPI-TAKVDVYSYGVVILEMVKGIRLSN 644 (736)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~p~~ 644 (736)
...+. ....+||..|.|||++.+.+| +..-|||++|++||.++....||+
T Consensus 720 ~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 720 TKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 76654 456789999999999999887 567899999999999999888875
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-22 Score=197.83 Aligned_cols=193 Identities=32% Similarity=0.492 Sum_probs=166.1
Q ss_pred cCeeceeEEEEeeeCC-CcEEEEEEeCcccc--cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCHhh
Q 041821 470 LGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQ--GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDK 546 (736)
Q Consensus 470 lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 546 (736)
||+|++|.||++.... ++.+++|++..... ..+.+.+|++.++.++|++|+++++++......++++|++++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999654 89999999976544 35678999999999999999999999999999999999999999999
Q ss_pred hcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC-----------------CccEEcccCcccccCCCCCcceeecccccCc
Q 041821 547 HLFSS-YFLGWKERFKVALGTAKGLAYLHHDE-----------------FEPKIADFGLAKLSQRGSNSSQFSQIRGTKG 608 (736)
Q Consensus 547 ~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~-----------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~ 608 (736)
++... ..+++..+..++.+++++|.|||+.+ ..++|+|||.+........ ......+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~ 158 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGTPA 158 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccCCCC
Confidence 99765 46899999999999999999999752 4689999999987654321 1233457889
Q ss_pred ccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCC
Q 041821 609 YMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGK 687 (736)
Q Consensus 609 y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 687 (736)
|++||.+... .++.++|+|++|+++++|
T Consensus 159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------------- 187 (215)
T cd00180 159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------------- 187 (215)
T ss_pred ccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------------
Confidence 9999999877 788999999999999998
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 688 FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 688 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
..+.+++.+|++.+|++||++.+++++|
T Consensus 188 ------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3466788999999999999999998764
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >smart00108 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=180.60 Aligned_cols=99 Identities=45% Similarity=0.749 Sum_probs=89.5
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCC-CCCcceEEE
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTT-STGADRAEL 79 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~-~~~~~~a~L 79 (736)
+.|++|||.+.....+.+|||++.+ +++||+|||+.|+.+ +..|.+..+|+|+|.|.+|.++|++++. +.....|+|
T Consensus 15 ~~f~~G~~~~~~q~dgnlV~~~~~~-~~~vW~snt~~~~~~-~~~l~l~~dGnLvl~~~~g~~vW~S~t~~~~~~~~~~L 92 (114)
T smart00108 15 SLFELGFFTLIMQNDYNLILYKSSS-RTVVWVANRDNPVSD-SCTLTLQSDGNLVLYDGDGRVVWSSNTTGANGNYVLVL 92 (114)
T ss_pred CcEeeeccccCCCCCEEEEEEECCC-CcEEEECCCCCCCCC-CEEEEEeCCCCEEEEeCCCCEEEEecccCCCCceEEEE
Confidence 5799999998777889999999877 899999999999864 4889999999999999999999999986 455678999
Q ss_pred ccCCCeEEEccCCceeeeecCC
Q 041821 80 LDTGNLVLKDRHGKILWQSFDY 101 (736)
Q Consensus 80 ldsGNlVl~~~~~~~lWqSFd~ 101 (736)
+|+|||||++..+.+|||||||
T Consensus 93 ~ddGnlvl~~~~~~~~W~Sf~~ 114 (114)
T smart00108 93 LDDGNLVIYDSDGNFLWQSFDY 114 (114)
T ss_pred eCCCCEEEECCCCCEEeCCCCC
Confidence 9999999999999999999997
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-22 Score=213.67 Aligned_cols=185 Identities=18% Similarity=0.164 Sum_probs=153.8
Q ss_pred cccccCeeceeEEEEee-eCCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 466 ~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
.++.||-|+||+|-+++ ..+...+|+|.+.+.. ........|-.||+..+.+-||+||-.|.+.+.+|+||+|++
T Consensus 633 kik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIP 712 (1034)
T KOG0608|consen 633 KIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIP 712 (1034)
T ss_pred EEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccC
Confidence 35679999999999998 4446789999997633 223456789999999999999999999999999999999999
Q ss_pred CCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccC---------CCC
Q 041821 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQ---------RGS 595 (736)
Q Consensus 541 ~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~---------~~~ 595 (736)
||++..+|.+-+.+.+..++.++.++.-|+++.|.- ++++||+||||+.-+. .+.
T Consensus 713 GGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gd 792 (1034)
T KOG0608|consen 713 GGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGD 792 (1034)
T ss_pred CccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccccCCC
Confidence 999999999888899999999999999999998843 5589999999985321 110
Q ss_pred Cc-------------------------------ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCC
Q 041821 596 NS-------------------------------SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSN 644 (736)
Q Consensus 596 ~~-------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~ 644 (736)
.. ......+||+.|+|||++....|+..+|.||.|||||||+.|+.||.
T Consensus 793 H~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~ 872 (1034)
T KOG0608|consen 793 HHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFL 872 (1034)
T ss_pred ccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCcc
Confidence 00 00123579999999999999999999999999999999999999998
Q ss_pred ccccCC
Q 041821 645 WVVEDG 650 (736)
Q Consensus 645 ~~~~~~ 650 (736)
.....+
T Consensus 873 ~~tp~~ 878 (1034)
T KOG0608|consen 873 ADTPGE 878 (1034)
T ss_pred CCCCCc
Confidence 665444
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=196.64 Aligned_cols=181 Identities=29% Similarity=0.367 Sum_probs=155.6
Q ss_pred hhcccccCeeceeEEEEeeeCC-CcEEEEEEeCcccc--cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 464 KSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQ--GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
|.+.+.||+|++|.||++...+ ++.+|+|.+..... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 3567889999999999999765 88999999976443 46778899999999999999999999999999999999999
Q ss_pred CCCHhhhcccCCC-CCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecc
Q 041821 541 KQSLDKHLFSSYF-LGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 541 ~gsL~~~l~~~~~-l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
+++|.+++..... +++..+..++.+++.+|.|||..+ ..++|+|||++......... .....
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~-~~~~~ 159 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA-LLKTV 159 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-cccce
Confidence 9999999987666 899999999999999999999763 47899999999877554311 12345
Q ss_pred cccCcccChhcc-cCCCCccccceechhHHHHHHHhCCCCCCc
Q 041821 604 RGTKGYMAPEWA-SNLPITAKVDVYSYGVVILEMVKGIRLSNW 645 (736)
Q Consensus 604 ~gt~~y~aPE~~-~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~ 645 (736)
.++..|++||.+ ....++.++||||||++++||++|+.||..
T Consensus 160 ~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 160 KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 678899999998 667788899999999999999999999963
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.8e-22 Score=192.29 Aligned_cols=158 Identities=20% Similarity=0.147 Sum_probs=115.2
Q ss_pred CCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcC----------CCccEEcccCcccccCCCCCcceeecccccCccc
Q 041821 542 QSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYM 610 (736)
Q Consensus 542 gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~----------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~ 610 (736)
|+|.+++... ..+++.++..++.||++||.|||++ +..+|+ ||+++...... ..||+.||
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~kp~Nil~~~~~~~~~--fG~~~~~~~~~-------~~g~~~y~ 71 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQAKSGNILLTWDGLLKL--DGSVAFKTPEQ-------SRVDPYFM 71 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccEeEcCccceee--ccceEeecccc-------CCCccccc
Confidence 7899999764 4699999999999999999999985 345677 99988664422 25899999
Q ss_pred ChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCH
Q 041821 611 APEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNT 690 (736)
Q Consensus 611 aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 690 (736)
|||++.+..++.++|||||||++|||++|+.||...... ........... ... ++.. ...+.
T Consensus 72 aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~--------~~~~~~~~~~~--------~~~-~~~~-~~~~~ 133 (176)
T smart00750 72 APEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL--------SAILEILLNGM--------PAD-DPRD-RSNLE 133 (176)
T ss_pred ChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh--------cHHHHHHHHHh--------ccC-Cccc-cccHH
Confidence 999999999999999999999999999999998633211 11111111110 000 0000 01112
Q ss_pred HHHH--HHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 691 NQAA--TLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 691 ~~~~--~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
.... .+.+++.+||+.+|++||++.++++++..+..
T Consensus 134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 134 SVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred HHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 2222 68999999999999999999999999877643
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.2e-21 Score=198.08 Aligned_cols=255 Identities=20% Similarity=0.243 Sum_probs=180.1
Q ss_pred hhhhcccccCeeceeEEEEeeeC----CCcEEEEEEeCcccccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA----DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|...++||+|.|++||++++. ..+.||+|.+..... ...+.+|+++|..+. +.||+++.+++..++...+|+
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivl 114 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVL 114 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-chHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEe
Confidence 44667889999999999999943 467899999965433 234789999999994 999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-----------------ccEEcccCcccccCCCC----
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-----------------EPKIADFGLAKLSQRGS---- 595 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-----------------~~kl~DFGla~~~~~~~---- 595 (736)
||+++-...+++.. ++..++..+++.+.+||.++|..++ .-.|.|||+|.......
T Consensus 115 p~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~ 191 (418)
T KOG1167|consen 115 PYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEH 191 (418)
T ss_pred cccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhh
Confidence 99999998888754 6789999999999999999998755 33799999996211000
Q ss_pred --------------------------------------CcceeecccccCcccChhcccCCC-CccccceechhHHHHHH
Q 041821 596 --------------------------------------NSSQFSQIRGTKGYMAPEWASNLP-ITAKVDVYSYGVVILEM 636 (736)
Q Consensus 596 --------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el 636 (736)
.........||++|+|||++...+ -++++||||.|||++-+
T Consensus 192 s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lsl 271 (418)
T KOG1167|consen 192 SRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSL 271 (418)
T ss_pred hhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehh
Confidence 000011246999999999987654 68899999999999999
Q ss_pred HhCCCCCCccccCCccchhHHHHHHHHHHHHHh--hhc----c-cc----------cccc----ccC--c--cCC-CCCH
Q 041821 637 VKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL--YEE----E-AW----------IEEI----VDP--R--LKG-KFNT 690 (736)
Q Consensus 637 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~-~~----------~~~~----~d~--~--~~~-~~~~ 690 (736)
++++.||.....+-+...+....+-....++.. .+. + .. +..+ +.+ . ... ....
T Consensus 272 ls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d 351 (418)
T KOG1167|consen 272 LSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSD 351 (418)
T ss_pred hccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccc
Confidence 999999986654443222211111111111110 010 0 00 0000 000 0 000 1111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 691 NQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 691 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+..+++|+.+|++.||.+|.|+++.|+|
T Consensus 352 ~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 352 VFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 223478999999999999999999999976
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-21 Score=185.58 Aligned_cols=234 Identities=13% Similarity=0.192 Sum_probs=172.4
Q ss_pred hhhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEE-EEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWG-FCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~-~~~~~~~~~lv~e~ 538 (736)
+.|++.+.||+|.||.+.+++++. .+.+++|.+.......++|.+|..---.| .|.||+.-|+ .|+..+.+.+++||
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 568889999999999999999654 78899999988777788899998766556 4999999876 45667788899999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC------------------ccEEcccCcccccCCCCCccee
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF------------------EPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~------------------~~kl~DFGla~~~~~~~~~~~~ 600 (736)
+|.|+|.+-+... .+.+....+++.|++.||.|+|++++ ++||+|||+.+..+.. .
T Consensus 104 aP~gdL~snv~~~-GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t-----V 177 (378)
T KOG1345|consen 104 APRGDLRSNVEAA-GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT-----V 177 (378)
T ss_pred CccchhhhhcCcc-cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCce-----e
Confidence 9999999988664 48888999999999999999998743 7899999999765432 2
Q ss_pred ecccccCcccChhcccCC-----CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 601 SQIRGTKGYMAPEWASNL-----PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~-----~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
....-+..|.|||..... ...+.+|||.||+++|.+++|..|++....++. ...++..|..++.
T Consensus 178 ~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~----~Y~~~~~w~~rk~------- 246 (378)
T KOG1345|consen 178 KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDK----PYWEWEQWLKRKN------- 246 (378)
T ss_pred hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCc----hHHHHHHHhcccC-------
Confidence 233356789999987532 256789999999999999999999984432221 1222222222110
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 719 (736)
. .-|..-.. ..+++.++..+-+..+|++|--..++.+
T Consensus 247 -~--~~P~~F~~----fs~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 247 -P--ALPKKFNP----FSEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred -c--cCchhhcc----cCHHHHHHHHHhcCCcccccchhHHHHH
Confidence 0 11111111 2345667777899999999954444443
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-21 Score=190.54 Aligned_cols=246 Identities=19% Similarity=0.225 Sum_probs=168.8
Q ss_pred cccCeeceeEEEEee-eCCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC------eEEEEEe
Q 041821 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR------HRLLIYE 537 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~lv~e 537 (736)
..+|.|.- .|-.+- .-.+++||+|++... ....++..+|..++..+.|+||++++.++.... ..|+|||
T Consensus 23 ~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e 101 (369)
T KOG0665|consen 23 KPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVME 101 (369)
T ss_pred cccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHH
Confidence 34666665 444443 224789999998543 233456678999999999999999999997654 4699999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
||. .+|.+.+. -.++-..+..|+.|++.|+.|||+.++ .+||.|||+|+..... -..+
T Consensus 102 ~m~-~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~---~~mt 175 (369)
T KOG0665|consen 102 LMD-ANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD---FMMT 175 (369)
T ss_pred hhh-hHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc---cccC
Confidence 995 78888876 347888899999999999999997643 6799999999865443 2366
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCc----------cchh---HHHHHHHHHHHHH
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGE----------GQEA---ELKRFVREVKRKI 668 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~----------~~~~---~~~~~~~~~~~~~ 668 (736)
..+.|..|.|||++.+..+.+.+||||.||++.||++|+..|.....-++ .... .+........+..
T Consensus 176 pyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~ 255 (369)
T KOG0665|consen 176 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENR 255 (369)
T ss_pred chhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcC
Confidence 78899999999999998899999999999999999999988863211000 0000 0000011111100
Q ss_pred hhh-ccccccccccCccCC--CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 669 LYE-EEAWIEEIVDPRLKG--KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 669 ~~~-~~~~~~~~~d~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
... ...+-..+-|..... +.+......+.+++.+||-.||++|.+++++|+|
T Consensus 256 ~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 256 PQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 000 000001111111111 1122344567889999999999999999999987
|
|
| >PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.8e-21 Score=166.59 Aligned_cols=83 Identities=37% Similarity=0.719 Sum_probs=75.7
Q ss_pred cccCCceEEEEeecCCceEEEEEEccCccEEEEEecCCCCceEEEeeeccCCCCCCCCCCCCcccccCCCCcCCCCCCCC
Q 041821 185 FSSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKVTGSWMISWQALMQPGKVHGVCGKNGICVYTPEPKCSCPPGYE 264 (736)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~rl~l~~~G~l~~~~w~~~~~~W~~~~~~p~~~Cd~~~~CG~~g~C~~~~~~~C~C~~GF~ 264 (736)
..+.++.++++...+.+.++|++||.+|+++++.|+++.+.|.+.|.+|.++||+|+.||+||+|+.+..|.|+||+||+
T Consensus 28 v~~~~e~~~t~~~~~~s~~~r~~ld~~G~l~~~~w~~~~~~W~~~~~~p~d~Cd~y~~CG~~g~C~~~~~~~C~Cl~GF~ 107 (110)
T PF00954_consen 28 VSNNEEVYYTYSLSNSSVLSRLVLDSDGQLQRYIWNESTQSWSVFWSAPKDQCDVYGFCGPNGICNSNNSPKCSCLPGFE 107 (110)
T ss_pred EECCCeEEEEEecCCCceEEEEEEeeeeEEEEEEEecCCCcEEEEEEecccCCCCccccCCccEeCCCCCCceECCCCcC
Confidence 34556778888777778899999999999999999999999999999999999999999999999888889999999999
Q ss_pred cCC
Q 041821 265 ATE 267 (736)
Q Consensus 265 ~~~ 267 (736)
|++
T Consensus 108 P~n 110 (110)
T PF00954_consen 108 PKN 110 (110)
T ss_pred CCc
Confidence 974
|
This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.6e-20 Score=221.67 Aligned_cols=180 Identities=17% Similarity=0.171 Sum_probs=124.9
Q ss_pred cCCC-CceeeEEEEE-------EeCCeEEEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCCC-----
Q 041821 513 KIYH-MNLVRMWGFC-------SEGRHRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDEF----- 578 (736)
Q Consensus 513 ~l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~~----- 578 (736)
.++| +||++++++| .+.+..++++||+ +++|.++|... ..+++.+++.++.||++||.|||++++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl 106 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV 106 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 4556 6888888887 2334567888987 57999999753 469999999999999999999997632
Q ss_pred ------------------------------ccEEcccCcccccCCCCC--------------cceeecccccCcccChhc
Q 041821 579 ------------------------------EPKIADFGLAKLSQRGSN--------------SSQFSQIRGTKGYMAPEW 614 (736)
Q Consensus 579 ------------------------------~~kl~DFGla~~~~~~~~--------------~~~~~~~~gt~~y~aPE~ 614 (736)
.+||+|||+++....... ........||+.|||||+
T Consensus 107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 186 (793)
T PLN00181 107 RPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE 186 (793)
T ss_pred CchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence 246677777764321000 000112458899999999
Q ss_pred ccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHH
Q 041821 615 ASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAA 694 (736)
Q Consensus 615 ~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 694 (736)
+.+..++.++|||||||+||||++|.+|+.... ......... ...+.. .....
T Consensus 187 ~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~-----------~~~~~~~~~-----------~~~~~~-----~~~~~ 239 (793)
T PLN00181 187 DNGSSSNCASDVYRLGVLLFELFCPVSSREEKS-----------RTMSSLRHR-----------VLPPQI-----LLNWP 239 (793)
T ss_pred hccCCCCchhhhhhHHHHHHHHhhCCCchhhHH-----------HHHHHHHHh-----------hcChhh-----hhcCH
Confidence 999999999999999999999999887754110 001111000 011110 11123
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 695 TLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 695 ~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+++.+||+.+|.+||+|.||+++
T Consensus 240 ~~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 240 KEASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHHHHhCCCChhhCcChHHHhhc
Confidence 45678889999999999999999875
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.8e-18 Score=180.54 Aligned_cols=203 Identities=24% Similarity=0.345 Sum_probs=150.6
Q ss_pred HhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcC-------------
Q 041821 511 IGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHD------------- 576 (736)
Q Consensus 511 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~------------- 576 (736)
|+.+.|.|+.+++|.+.++...++|.+||+.|+|.+.+.... .+++.....++++|++||+|||+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 457899999999999999999999999999999999998744 799999999999999999999964
Q ss_pred ----CCccEEcccCcccccCCCCCcceeecccccCcccChhcccCCC-------CccccceechhHHHHHHHhCCCCCCc
Q 041821 577 ----EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-------ITAKVDVYSYGVVILEMVKGIRLSNW 645 (736)
Q Consensus 577 ----~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DvwS~Gvvl~el~tg~~p~~~ 645 (736)
.+.+||+|||+.................-..-|.|||.+.... .+.+.||||||++++|+++.+.||..
T Consensus 81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~ 160 (484)
T KOG1023|consen 81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL 160 (484)
T ss_pred eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence 4478999999998764311111122233456899999987631 46789999999999999999999986
Q ss_pred cccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 646 VVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
....... ..++..+.. + ......|.+.... +....+..++..||..+|++||++++|-..++.+.
T Consensus 161 ~~~~~~~-----~eii~~~~~----~----~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 161 RNLVEDP-----DEIILRVKK----G----GSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred ccccCCh-----HHHHHHHHh----c----CCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 4433321 111111111 1 1222223222111 23347889999999999999999999999998876
Q ss_pred ccc
Q 041821 726 TES 728 (736)
Q Consensus 726 ~~~ 728 (736)
...
T Consensus 226 ~~~ 228 (484)
T KOG1023|consen 226 KGG 228 (484)
T ss_pred ccc
Confidence 654
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.2e-18 Score=193.30 Aligned_cols=237 Identities=20% Similarity=0.148 Sum_probs=172.0
Q ss_pred cccccCeeceeEEEEeee-CCCcEEEEEEeC----ccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 466 FKEELGRGGSGAVYKGVL-ADGRAVAVKRLG----DLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 466 ~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~----~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
..+.+|.|++|.|+.... ...+..+.|... ... +....+..|+.+-..+.|||++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 456899999997777763 223334444322 211 111225678888888999999888887777666666699
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc--ce
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS--SQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~--~~ 599 (736)
||++ +|..++.+...+...++..++.|+++|+.|||+.+ ..+||+|||.+......... ..
T Consensus 402 ~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~ 480 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHE 480 (601)
T ss_pred cccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhh
Confidence 9999 99999988878999999999999999999999763 37899999999877665554 44
Q ss_pred eecccccCcccChhcccCCCCcc-ccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITA-KVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~-~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
....+|+..|+|||.+.+..|.+ ..||||.|+++..|++|+.||.......+.. ..... ...
T Consensus 481 ~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~------------~~~~~-----~~~ 543 (601)
T KOG0590|consen 481 SSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF------------KTNNY-----SDQ 543 (601)
T ss_pred hcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch------------hhhcc-----ccc
Confidence 66788999999999999999876 6899999999999999999997554332211 00000 000
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.....-........+.+...++.+||+.||.+|.|+.+|++.
T Consensus 544 ~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 544 RNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred cccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 000000001122344567889999999999999999999874
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.4e-15 Score=159.62 Aligned_cols=242 Identities=24% Similarity=0.294 Sum_probs=179.9
Q ss_pred hhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccc----cHHHHHHHHHHHhcCCCC-ceeeEEEEEEeCCeEEEEEec
Q 041821 464 KSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQ----GEEVFWAEVSTIGKIYHM-NLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 538 (736)
|.+.+.||.|+|+.||++... ..+|+|.+..... ....+.+|+.+++.+.|+ +|+++++.+......++++|+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 556788999999999999976 8899999965332 356789999999999988 799999999888888999999
Q ss_pred CCCCCHhhhcccCC---CCCHHHHHHHHHHHHHHhhhhhcCCC-----------------ccEEcccCcccccCCCCCcc
Q 041821 539 VEKQSLDKHLFSSY---FLGWKERFKVALGTAKGLAYLHHDEF-----------------EPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 539 ~~~gsL~~~l~~~~---~l~~~~~~~i~~~i~~gL~yLH~~~~-----------------~~kl~DFGla~~~~~~~~~~ 598 (736)
+.++++.+++.... .+.......++.|++.++.|+|..++ .++++|||+++.........
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 159 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTS 159 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccc
Confidence 99999998777654 68999999999999999999996521 47999999998665443221
Q ss_pred ----eeecccccCcccChhcccC---CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 599 ----QFSQIRGTKGYMAPEWASN---LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 599 ----~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
......||..|+|||.+.. ..+....|+||+|++++++++|..|+...... .........+...
T Consensus 160 ~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~-----~~~~~~~~~~~~~---- 230 (384)
T COG0515 160 SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS-----SATSQTLKIILEL---- 230 (384)
T ss_pred cccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc-----ccHHHHHHHHHhc----
Confidence 2456789999999999987 57899999999999999999999996533211 0001111111100
Q ss_pred ccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 672 EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 672 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ...................+.+++..++..+|..|.++.+....
T Consensus 231 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 231 P----TPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred C----CcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0 00000011111112233567888899999999999998877664
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3e-16 Score=166.39 Aligned_cols=147 Identities=19% Similarity=0.171 Sum_probs=110.2
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC--CCcEEEEEEeCcc------cccHHHHHHHHHHHhcCCCCceee-EEEEEEeCC
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA--DGRAVAVKRLGDL------HQGEEVFWAEVSTIGKIYHMNLVR-MWGFCSEGR 530 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~~~ 530 (736)
....|.+.+.||+|+||+||+|+.. +++.||||++... ....+.+.+|+++|++++|+|++. +++. +
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~ 91 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----G 91 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----C
Confidence 3456889999999999999999854 4777899987532 123456899999999999999985 4432 4
Q ss_pred eEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC-----C------------ccEEcccCcccccCC
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE-----F------------EPKIADFGLAKLSQR 593 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-----~------------~~kl~DFGla~~~~~ 593 (736)
..+|||||+++++|... .. .. ...++.|+++||.|||+.+ + .+||+|||+|+.+..
T Consensus 92 ~~~LVmE~~~G~~L~~~-~~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA-RP---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred CcEEEEEccCCCCHHHh-Cc---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 57999999999999732 11 11 1467899999999999652 2 579999999997755
Q ss_pred CCCcce------eecccccCcccChhcccC
Q 041821 594 GSNSSQ------FSQIRGTKGYMAPEWASN 617 (736)
Q Consensus 594 ~~~~~~------~~~~~gt~~y~aPE~~~~ 617 (736)
...... .....+++.|+|||.+.-
T Consensus 165 ~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 165 RGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred CcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 432211 245678899999999863
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.9e-15 Score=157.51 Aligned_cols=244 Identities=18% Similarity=0.203 Sum_probs=173.5
Q ss_pred hhhcccccCeeceeEEEEeeeCCC--cEEEEEEeCccc-ccHHHHHHHHHHHhcCCC----CceeeEEEEE-EeCCeEEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVLADG--RAVAVKRLGDLH-QGEEVFWAEVSTIGKIYH----MNLVRMWGFC-SEGRHRLL 534 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~~~--~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l 534 (736)
.|.+.++||+|+||.||++..... ..+|+|...... .....+..|+.++..+.+ +++.++++.. ..+...+|
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 678899999999999999995443 478888875532 222267789999988873 5888899888 57778899
Q ss_pred EEecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCCC---------------------ccEEcccCccc--
Q 041821 535 IYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDEF---------------------EPKIADFGLAK-- 589 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------------~~kl~DFGla~-- 589 (736)
||+.+ +.+|.++.... +.++..++.+|+.|++.+|.+||+.++ .+.|.|||+++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~ 177 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRF 177 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccc
Confidence 99988 78999977543 479999999999999999999997532 47899999998
Q ss_pred ccCCCCCc----c-e-eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHH
Q 041821 590 LSQRGSNS----S-Q-FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVRE 663 (736)
Q Consensus 590 ~~~~~~~~----~-~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 663 (736)
........ . . .....||..|+++....+...+.+.|+||++-++.|++.|..|+........ ...+...
T Consensus 178 ~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-----~~~~~~~ 252 (322)
T KOG1164|consen 178 KYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-----KSKFEKD 252 (322)
T ss_pred cccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-----HHHHHHH
Confidence 32221110 0 1 2235699999999999999999999999999999999999999854322111 1111111
Q ss_pred HHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 664 VKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 664 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
.. ...... .....+ ..+.++...+-..+..++|....+...|.....+.
T Consensus 253 ~~-----------~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 253 PR-----------KLLTDR--FGDLKP---EEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred hh-----------hhcccc--ccCCCh---HHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 00 000110 111122 33444444555589999999999998887765543
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.3e-15 Score=163.93 Aligned_cols=208 Identities=20% Similarity=0.182 Sum_probs=163.3
Q ss_pred ccCeeceeEEEEee----eCCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEEEEecCC
Q 041821 469 ELGRGGSGAVYKGV----LADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 469 ~lG~G~fg~Vy~~~----~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
.+|+|.||.|++++ ...+..+|+|.+++.. ........|..++..++ ||.+|++.-.++.+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 47999999999876 2237788999886532 11124556888899997 9999999999999999999999999
Q ss_pred CCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceeeccc
Q 041821 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFSQIR 604 (736)
Q Consensus 541 ~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~~~~ 604 (736)
+|+|...+.....++......+...++-+++++|.. ++.+|+.|||+++..-.... .+
T Consensus 81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~------~c 154 (612)
T KOG0603|consen 81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI------AC 154 (612)
T ss_pred cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhh------cc
Confidence 999999998888888888888899999999999963 45799999999987644322 27
Q ss_pred ccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCcc
Q 041821 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRL 684 (736)
Q Consensus 605 gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 684 (736)
||..|||||++. ....++|.||||++++||++|..||... .. .. ++. .
T Consensus 155 gt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~---------~~----~~---------------Il~--~ 202 (612)
T KOG0603|consen 155 GTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGD---------TM----KR---------------ILK--A 202 (612)
T ss_pred cchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchH---------HH----HH---------------Hhh--h
Confidence 999999999998 5788999999999999999999998730 00 11 111 0
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 041821 685 KGKFNTNQAATLIGIGISCVDEDRSKRPTM 714 (736)
Q Consensus 685 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 714 (736)
...++......+.+++..++..+|..|.-.
T Consensus 203 ~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 203 ELEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred ccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 123455566677778888888888888644
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.6e-14 Score=143.34 Aligned_cols=184 Identities=18% Similarity=0.248 Sum_probs=151.2
Q ss_pred hhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 463 TKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
.|.+.++||+|+||+.+.|+ +-++++||||.-.. .....++..|.+..+.| ..+.|..++-+-.++.+-.||+|++
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL- 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL- 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccc-cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence 46788999999999999999 66899999997533 22334566788888877 4789999998888888889999998
Q ss_pred CCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCCC---------------------ccEEcccCcccccCCCCCcc
Q 041821 541 KQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDEF---------------------EPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 541 ~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------------~~kl~DFGla~~~~~~~~~~ 598 (736)
+-||.++..-. +.++.+++..||.|++.-++|+|++++ .+.|+|||+|+.........
T Consensus 107 GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~Tkq 186 (449)
T KOG1165|consen 107 GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQ 186 (449)
T ss_pred CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccc
Confidence 68888877543 379999999999999999999998743 46899999999776543322
Q ss_pred -----eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCcccc
Q 041821 599 -----QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVE 648 (736)
Q Consensus 599 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~ 648 (736)
......||.+||+--...+..-+.+-|+=|+|-++...+-|..||.....
T Consensus 187 HIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA 241 (449)
T KOG1165|consen 187 HIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 241 (449)
T ss_pred cCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence 23446799999999988899999999999999999999999999986543
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.2e-14 Score=133.75 Aligned_cols=188 Identities=18% Similarity=0.241 Sum_probs=151.6
Q ss_pred HHHhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCC-CceeeEEEEEEeCCeEEEEE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH-MNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 536 (736)
|....|.+.++||.|+||.+|.|. ..+|+.||||.-... ....++.-|..+.+.|+| ..|..+.-+..+..+-.+||
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~-a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK-AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc-CCCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 455678999999999999999999 778999999986432 223456778999988874 56777777888888899999
Q ss_pred ecCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCcccccCCCCC
Q 041821 537 EYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 537 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~~~~~~~~ 596 (736)
+.. +-+|.++..- .+.++.++.+-++-|++.-++|+|.+++ ++.|+|||+|+.......
T Consensus 91 dLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t 169 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT 169 (341)
T ss_pred ecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence 998 6889887754 3368999999999999999999996533 568999999987654432
Q ss_pred cc-----eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCcccc
Q 041821 597 SS-----QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVE 648 (736)
Q Consensus 597 ~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~ 648 (736)
.. ......||.+|.+--...+..-+.+-|+=|+|-+|...-.|..||+....
T Consensus 170 ~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka 226 (341)
T KOG1163|consen 170 RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA 226 (341)
T ss_pred cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence 22 23446799999998887777788899999999999999999999986543
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.5e-14 Score=138.61 Aligned_cols=158 Identities=11% Similarity=0.070 Sum_probs=118.0
Q ss_pred HHHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHH----H------HHHHHHHHhcCCCCceeeEEEEE
Q 041821 457 AELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEE----V------FWAEVSTIGKIYHMNLVRMWGFC 526 (736)
Q Consensus 457 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~----~------~~~E~~~l~~l~h~niv~l~~~~ 526 (736)
.++...+|...+.||.|+||.||+... ++..+|||.+.......+ . +.+|+..+.++.|++|..+.+++
T Consensus 26 ~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~ 104 (232)
T PRK10359 26 DDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY 104 (232)
T ss_pred HHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence 466788899999999999999999766 577899999965332222 1 57899999999999999999886
Q ss_pred EeC--------CeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC---------------ccEEc
Q 041821 527 SEG--------RHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF---------------EPKIA 583 (736)
Q Consensus 527 ~~~--------~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------~~kl~ 583 (736)
... ...+|+|||++|.+|.++.. ++. ....+++.+|..||+.++ .++|+
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~gi~li 176 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNGLRII 176 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCCEEEE
Confidence 643 35789999999999988732 232 345689999999997522 37999
Q ss_pred ccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHH
Q 041821 584 DFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMV 637 (736)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~ 637 (736)
|||..+........ ..++....|+.++||||||+++.-+.
T Consensus 177 Dfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 177 DLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred ECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 99988654321111 11444556778999999999887544
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.49 E-value=9.1e-14 Score=135.45 Aligned_cols=124 Identities=13% Similarity=0.076 Sum_probs=93.3
Q ss_pred ccccCeeceeEEEEeeeCCCcEEEEEEeCcccc---c-------HH-----------------HHHHHHHHHhcCCCCce
Q 041821 467 KEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQ---G-------EE-----------------VFWAEVSTIGKIYHMNL 519 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~-------~~-----------------~~~~E~~~l~~l~h~ni 519 (736)
.+.||+|+||.||+|...+|+.||||+++.... . .. ...+|++.|.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 468999999999999987899999999964321 1 01 12349999999987776
Q ss_pred eeEEEEEEeCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhh-hcCC---------------CccEEc
Q 041821 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL-HHDE---------------FEPKIA 583 (736)
Q Consensus 520 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yL-H~~~---------------~~~kl~ 583 (736)
.....+... ..+|||||++++++...+.....++..++..++.|++.+|.|| |+.+ ..++|+
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~~~~v~Li 159 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYHDGKLYII 159 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEECCcEEEE
Confidence 443332222 2389999999887765544445789999999999999999999 5543 268999
Q ss_pred ccCcccccC
Q 041821 584 DFGLAKLSQ 592 (736)
Q Consensus 584 DFGla~~~~ 592 (736)
|||+|....
T Consensus 160 DFG~a~~~~ 168 (190)
T cd05147 160 DVSQSVEHD 168 (190)
T ss_pred EccccccCC
Confidence 999997543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.7e-14 Score=162.73 Aligned_cols=234 Identities=23% Similarity=0.249 Sum_probs=161.6
Q ss_pred hhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc--ccHHHH---HHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH--QGEEVF---WAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~---~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.+.+.+.||++.|=+|.+|+.+.|. |+||++-+.. ...+.| +.|++ ...++|||.+.+.-.-...+..|||=+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 4567789999999999999987777 9999984432 223333 44555 566789999998877667777788888
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcc-ee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSS-QF 600 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~-~~ 600 (736)
|.. .+|.+.|.-+..+...+.+-|+-|++.||.-.|..++ -+.|+||..-+..--..... ..
T Consensus 102 yvk-hnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf 180 (1431)
T KOG1240|consen 102 YVK-HNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADF 180 (1431)
T ss_pred HHh-hhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccc
Confidence 885 6899998877778888999999999999999997654 24689998776432221111 11
Q ss_pred ----ecccccCcccChhcccC----------CC-CccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHH
Q 041821 601 ----SQIRGTKGYMAPEWASN----------LP-ITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREV 664 (736)
Q Consensus 601 ----~~~~gt~~y~aPE~~~~----------~~-~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 664 (736)
.+...-..|+|||.+.. .+ .+++-||||+||++.||++ |++||.... +..-
T Consensus 181 ~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ------------L~aY- 247 (1431)
T KOG1240|consen 181 TFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ------------LLAY- 247 (1431)
T ss_pred eEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH------------HHhH-
Confidence 11222347999998753 12 6788999999999999988 577775211 0000
Q ss_pred HHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 665 KRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 665 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
+..-....+..++++-|+ .+..|++.|++.||++|.++++.++.-.++
T Consensus 248 r~~~~~~~e~~Le~Ied~------------~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 248 RSGNADDPEQLLEKIEDV------------SLRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred hccCccCHHHHHHhCcCc------------cHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 000000000012222222 567899999999999999999999875544
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.4e-14 Score=151.43 Aligned_cols=173 Identities=20% Similarity=0.245 Sum_probs=117.8
Q ss_pred cccccCeeceeEEEEeeeCC----CcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEE-------EEEe-----
Q 041821 466 FKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWG-------FCSE----- 528 (736)
Q Consensus 466 ~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~-------~~~~----- 528 (736)
+.+..+..+++.+....... ...++.|..+... .......+++-.+....|-+..-+.+ ....
T Consensus 248 ~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~ 327 (516)
T KOG1033|consen 248 ISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGK 327 (516)
T ss_pred ccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcccccccc
Confidence 34456666666666555322 2233444433322 22233344555555554444433333 1111
Q ss_pred CCeEEEEEecCCCCCHhhhcccCC---CCCHHHHHHHHHHHHHHhhh---hhcC----------CCccEEcccCcccccC
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSSY---FLGWKERFKVALGTAKGLAY---LHHD----------EFEPKIADFGLAKLSQ 592 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~~---~l~~~~~~~i~~~i~~gL~y---LH~~----------~~~~kl~DFGla~~~~ 592 (736)
....+|.|++|...+|.++|.+.. ..++...+.++.|++.|+.| +|.+ +-++||.|||+.....
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~ 407 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQD 407 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhhccchhhhccccccccccchhhhhhhhhheeecc
Confidence 225689999999999999997554 57788899999999999976 4543 3378999999987665
Q ss_pred CCC----CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh
Q 041821 593 RGS----NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK 638 (736)
Q Consensus 593 ~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t 638 (736)
... .....+..+||..||+||.+.+..|+.|+||||||++|+|++.
T Consensus 408 ~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 408 KDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred cCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 544 1223566789999999999999999999999999999999997
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.2e-13 Score=130.00 Aligned_cols=125 Identities=15% Similarity=0.116 Sum_probs=95.6
Q ss_pred ccccCeeceeEEEEeeeCCCcEEEEEEeCccccc---------------------------HHHHHHHHHHHhcCCCCce
Q 041821 467 KEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQG---------------------------EEVFWAEVSTIGKIYHMNL 519 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---------------------------~~~~~~E~~~l~~l~h~ni 519 (736)
.+.||+|+||.||+|+..+|+.||||+++..... ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4679999999999999778999999998643210 1123578999999999987
Q ss_pred eeEEEEEEeCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhc-CC---------------CccEEc
Q 041821 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH-DE---------------FEPKIA 583 (736)
Q Consensus 520 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~-~~---------------~~~kl~ 583 (736)
.....+... ..+|||||++++++.........++..+...++.|++.+|.+||+ .+ ..++|+
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~~~~~~li 159 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYHDGKPYII 159 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEECCCEEEE
Confidence 554444333 248999999988655433334467888999999999999999998 53 368999
Q ss_pred ccCcccccCC
Q 041821 584 DFGLAKLSQR 593 (736)
Q Consensus 584 DFGla~~~~~ 593 (736)
|||++..+..
T Consensus 160 DFG~a~~~~~ 169 (190)
T cd05145 160 DVSQAVELDH 169 (190)
T ss_pred EcccceecCC
Confidence 9999986644
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.38 E-value=7e-13 Score=153.00 Aligned_cols=183 Identities=16% Similarity=0.177 Sum_probs=145.1
Q ss_pred HHHHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCC---CCceeeEEEEEEeCCeE
Q 041821 456 YAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY---HMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 456 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~ 532 (736)
.-++-...+.+.+.||+|+||.||+|...+|+.||+|.-+.....+ |.--.+++.+|+ -+-|..+...+.-.+.-
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE--fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE--FYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee--eeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 3455566778889999999999999998789999999976543221 111112233333 23344444555556777
Q ss_pred EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-----------------------ccEEcccCccc
Q 041821 533 LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-----------------------EPKIADFGLAK 589 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-----------------------~~kl~DFGla~ 589 (736)
+||+||.+.|+|.+++...+.++|.....++.|+++-+++||..+| .++|+|||.+.
T Consensus 770 ~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred eeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 8999999999999999988899999999999999999999996532 57999999997
Q ss_pred ccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCC
Q 041821 590 LSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI 640 (736)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~ 640 (736)
.+..-..........+|-.+-.+|+..+.++++++|-|.|..+++-|+.|+
T Consensus 850 Dm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 850 DMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred eeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence 665544445677888999999999999999999999999999999999995
|
|
| >PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] | Back alignment and domain information |
|---|
Probab=99.35 E-value=9.8e-13 Score=103.56 Aligned_cols=59 Identities=32% Similarity=0.673 Sum_probs=49.2
Q ss_pred eeeEEeeCCcCccCccccc-cCCCCHHHHHHHhhcCCCceeEEecc-CCCcceeee-eeccc
Q 041821 289 EVKFVGVPNTDFYGFDLNY-SQTVSKEACMKLCLDDCRCSGFSYRL-TGQGLCFTK-SVLFN 347 (736)
Q Consensus 289 ~~~f~~~~~~~~~~~~~~~-~~~~s~~~C~~~Cl~nCsC~Ayay~~-~g~~~C~~~-~~l~~ 347 (736)
.++|++++++++|+++... ..++++++|++.||+||||+||+|.. .++++|++| ++|+|
T Consensus 4 ~d~F~~l~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~~~~~~C~lW~~~L~d 65 (66)
T PF08276_consen 4 GDGFLKLPNMKLPDFDNAIVDSSVSLEECEKACLSNCSCTAYAYSNLSGGGGCLLWYGDLVD 65 (66)
T ss_pred CCEEEEECCeeCCCCcceeeecCCCHHHHHhhcCCCCCEeeEEeeccCCCCEEEEEcCEeec
Confidence 4699999999999985443 36699999999999999999999973 267899998 46776
|
These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs |
| >cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.9e-12 Score=107.24 Aligned_cols=82 Identities=24% Similarity=0.504 Sum_probs=63.0
Q ss_pred ccccCCCCceeeEEeeCCcCccCccccccCCCCHHHHHHHhhcCCCceeEEeccCCCcceeeeee-cccceecCCCCceE
Q 041821 280 NRTCSSSLTEVKFVGVPNTDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKSV-LFNGFKAPNFPGII 358 (736)
Q Consensus 280 ~l~C~~~~~~~~f~~~~~~~~~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~g~~~C~~~~~-l~~~~~~~~~~~~~ 358 (736)
++.|..+...+.|+.++++++|+..... ...++++|++.||+||+|.||+|. +++++|++|.. +.+.......+.++
T Consensus 2 ~~~C~~~~~~~~f~~~~~~~~~~~~~~~-~~~s~~~C~~~Cl~nCsC~a~~~~-~~~~~C~~~~~~~~~~~~~~~~~~~~ 79 (84)
T cd01098 2 PLNCGGDGSTDGFLKLPDVKLPDNASAI-TAISLEECREACLSNCSCTAYAYN-NGSGGCLLWNGLLNNLRSLSSGGGTL 79 (84)
T ss_pred CcccCCCCCCCEEEEeCCeeCCCchhhh-ccCCHHHHHHHHhcCCCcceeeec-CCCCeEEEEeceecceEeecCCCcEE
Confidence 3467543224689999999999775544 678999999999999999999998 56789999854 55655544445899
Q ss_pred EEecc
Q 041821 359 YLKLP 363 (736)
Q Consensus 359 ~ik~~ 363 (736)
||||+
T Consensus 80 yiKv~ 84 (84)
T cd01098 80 YLRLA 84 (84)
T ss_pred EEEeC
Confidence 99985
|
PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. |
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.4e-11 Score=119.01 Aligned_cols=168 Identities=14% Similarity=0.031 Sum_probs=122.1
Q ss_pred cccccCeeceeEEEEeeeCCCcEEEEEEeCcccccH-----HHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEEEEecC
Q 041821 466 FKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE-----EVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 466 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~-----~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
....|++|+||+||.+.. .+.+++.+.+.....-. ..+.+|+++|++|. |++|.+++++ ...+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 346799999999998776 67888888886544322 25789999999995 5889999886 3469999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC-----------------CccEEcccCcccccCCCCCc----c
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE-----------------FEPKIADFGLAKLSQRGSNS----S 598 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-----------------~~~kl~DFGla~~~~~~~~~----~ 598 (736)
.+.+|.+.+.. ....++.|++++|.++|+.+ ..++|+|||+|......... .
T Consensus 81 ~G~~L~~~~~~-------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~ 153 (218)
T PRK12274 81 AGAAMYQRPPR-------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLA 153 (218)
T ss_pred cCccHHhhhhh-------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHH
Confidence 99998764321 12457889999999999652 25799999999865443210 0
Q ss_pred --e-----eecccccCcccChhcccCC-CCc-cccceechhHHHHHHHhCCCCCCc
Q 041821 599 --Q-----FSQIRGTKGYMAPEWASNL-PIT-AKVDVYSYGVVILEMVKGIRLSNW 645 (736)
Q Consensus 599 --~-----~~~~~gt~~y~aPE~~~~~-~~~-~~~DvwS~Gvvl~el~tg~~p~~~ 645 (736)
. ......++.|++|+...-. ..+ ...+.++-|.-+|.++|++.++..
T Consensus 154 ~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 154 REDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0 0112357788888864422 233 577888999999999999887653
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.3e-12 Score=127.38 Aligned_cols=212 Identities=15% Similarity=0.143 Sum_probs=130.2
Q ss_pred hhcccccCeeceeEEEEeeeCC-CcEEEEEEeCc----ccccHHHHHHHHHHHhcCCC----------CceeeEEEEE--
Q 041821 464 KSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGD----LHQGEEVFWAEVSTIGKIYH----------MNLVRMWGFC-- 526 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~h----------~niv~l~~~~-- 526 (736)
....+.||.|+++.||.++... ++.+|||.... .....+++.+|......+.+ -.++.-++..
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 3445689999999999999654 89999998732 22334566666655555332 1222222222
Q ss_pred -------EeCC--------eEEEEEecCCCCCHhhhccc---CC----CCCHHHHHHHHHHHHHHhhhhhcC--------
Q 041821 527 -------SEGR--------HRLLIYEYVEKQSLDKHLFS---SY----FLGWKERFKVALGTAKGLAYLHHD-------- 576 (736)
Q Consensus 527 -------~~~~--------~~~lv~e~~~~gsL~~~l~~---~~----~l~~~~~~~i~~~i~~gL~yLH~~-------- 576 (736)
.... ..+++|+-+ .++|.+++.. .. .+....++.+..|+++.+++||+.
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 1111 235677777 4788877542 11 233445567779999999999965
Q ss_pred --------CCccEEcccCcccccCCCCCcceeecccccCcccChhcccC--------CCCccccceechhHHHHHHHhCC
Q 041821 577 --------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN--------LPITAKVDVYSYGVVILEMVKGI 640 (736)
Q Consensus 577 --------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwS~Gvvl~el~tg~ 640 (736)
++.++|+||+.....+.. ......+..|.+||.... ..++.+.|.|++|+++|.|.+++
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~~-----~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~ 247 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGTR-----YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGR 247 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTEE-----EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS
T ss_pred eeeEEEcCCCCEEEcChHHHeecCce-----eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHcc
Confidence 457899999887654321 111345678999997643 24788999999999999999999
Q ss_pred CCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCC
Q 041821 641 RLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKR 711 (736)
Q Consensus 641 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 711 (736)
.||.......... .. -..+. +.++.+..||..+|+.||++|
T Consensus 248 lPf~~~~~~~~~~----------------------------~~-f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 248 LPFGLSSPEADPE----------------------------WD-FSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp -STCCCGGGSTSG----------------------------GG-GTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCCcccccc----------------------------cc-chhcC-CcCHHHHHHHHHHccCCcccC
Confidence 9998553322110 01 12344 677889999999999999988
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.2e-11 Score=125.72 Aligned_cols=178 Identities=18% Similarity=0.197 Sum_probs=120.4
Q ss_pred CCCceeeEEEEEEe---------------------------CCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHH
Q 041821 515 YHMNLVRMWGFCSE---------------------------GRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTA 567 (736)
Q Consensus 515 ~h~niv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~ 567 (736)
+|||||++.++|.+ +...|+||.-.+ .+|.+++..+. .+.....-|+.|++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~-~s~r~~~~~laQlL 351 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH-RSYRTGRVILAQLL 351 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC-CchHHHHHHHHHHH
Confidence 59999999887753 235689998775 78999987654 56677778899999
Q ss_pred HHhhhhhcCCC--------------------ccEEcccCcccccCCCC----CcceeecccccCcccChhcccCCC----
Q 041821 568 KGLAYLHHDEF--------------------EPKIADFGLAKLSQRGS----NSSQFSQIRGTKGYMAPEWASNLP---- 619 (736)
Q Consensus 568 ~gL~yLH~~~~--------------------~~kl~DFGla~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~---- 619 (736)
+|+.|||.+++ .+.|+|||.+-.-+... ..+..-..-|.-.-||||+....+
T Consensus 352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~a 431 (598)
T KOG4158|consen 352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNA 431 (598)
T ss_pred HHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCce
Confidence 99999996533 46899999874322110 011112234677889999986433
Q ss_pred -C-ccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHH
Q 041821 620 -I-TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLI 697 (736)
Q Consensus 620 -~-~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~ 697 (736)
. -.|+|.|+.|.+.||++....||+..-+.-- +... ..+-- -+..+..++..+.
T Consensus 432 vvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L----~~r~----------------Yqe~q----LPalp~~vpp~~r 487 (598)
T KOG4158|consen 432 VVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL----DTRT----------------YQESQ----LPALPSRVPPVAR 487 (598)
T ss_pred eeccchhhhhhhhhhHHHHhccCCcccccchhee----chhh----------------hhhhh----CCCCcccCChHHH
Confidence 1 2489999999999999999999985211000 0000 00000 1223445556788
Q ss_pred HHHHHcccCCCCCCCCHHHHH
Q 041821 698 GIGISCVDEDRSKRPTMDSVV 718 (736)
Q Consensus 698 ~li~~cl~~dP~~RPs~~evl 718 (736)
+|+...|+.||.+|++..-..
T Consensus 488 qlV~~lL~r~pskRvsp~iAA 508 (598)
T KOG4158|consen 488 QLVFDLLKRDPSKRVSPNIAA 508 (598)
T ss_pred HHHHHHhcCCccccCCccHHH
Confidence 899999999999999864433
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.5e-11 Score=123.98 Aligned_cols=125 Identities=14% Similarity=0.124 Sum_probs=95.4
Q ss_pred hhcccccCeeceeEEEEee--eCCCcEEEEEEeCcccc-------------------------cHHHHHHHHHHHhcCCC
Q 041821 464 KSFKEELGRGGSGAVYKGV--LADGRAVAVKRLGDLHQ-------------------------GEEVFWAEVSTIGKIYH 516 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~--~~~~~~vavK~~~~~~~-------------------------~~~~~~~E~~~l~~l~h 516 (736)
|.+.+.||+|+||.||+|. ..+|+.||||++..... ....+..|+.++.++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 6778899999999999998 56799999999864211 01235689999999975
Q ss_pred C--ceeeEEEEEEeCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------C
Q 041821 517 M--NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------F 578 (736)
Q Consensus 517 ~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~ 578 (736)
. .+.+++++ . ..+|||||+++.+|...+.....+...+...++.||+.+|.+||+.+ .
T Consensus 110 ~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~~~ 185 (237)
T smart00090 110 AGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVHDG 185 (237)
T ss_pred cCCCCCeeeEe---c-CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEECC
Confidence 3 23444442 2 34899999999888776544445666777899999999999999887 3
Q ss_pred ccEEcccCcccccC
Q 041821 579 EPKIADFGLAKLSQ 592 (736)
Q Consensus 579 ~~kl~DFGla~~~~ 592 (736)
+++|+|||.+....
T Consensus 186 ~i~LiDFg~a~~~~ 199 (237)
T smart00090 186 KVVIIDVSQSVELD 199 (237)
T ss_pred CEEEEEChhhhccC
Confidence 68999999987543
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.9e-11 Score=117.39 Aligned_cols=105 Identities=14% Similarity=0.146 Sum_probs=80.9
Q ss_pred ccccCeeceeEEEEeeeCCCcEEEEEEeCcc-cccHHHHHHHHHHHhcC-----CCCceeeEEEEEEeCC---eE-EEEE
Q 041821 467 KEELGRGGSGAVYKGVLADGRAVAVKRLGDL-HQGEEVFWAEVSTIGKI-----YHMNLVRMWGFCSEGR---HR-LLIY 536 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~~-~lv~ 536 (736)
.+.||+|+||.||. .+.....+||++... ....+.+.+|+.+++.+ .||||++++|++.++. .. .+|+
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~ 84 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA 84 (210)
T ss_pred cceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence 45799999999996 333333479988653 23456789999999999 5799999999998864 33 3789
Q ss_pred ec--CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHh-hhhhcC
Q 041821 537 EY--VEKQSLDKHLFSSYFLGWKERFKVALGTAKGL-AYLHHD 576 (736)
Q Consensus 537 e~--~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL-~yLH~~ 576 (736)
|| +++++|.+++.+. .+++. ..++.|++.++ +|||++
T Consensus 85 e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~ 124 (210)
T PRK10345 85 DFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDN 124 (210)
T ss_pred cCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHC
Confidence 99 6689999999764 45555 35678888888 899975
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.9e-12 Score=146.53 Aligned_cols=191 Identities=19% Similarity=0.165 Sum_probs=125.3
Q ss_pred hhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 463 TKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+++.++.|-.|+||.||..+++. .+.+|+| +++.... +++ ++.....|.+|
T Consensus 84 df~~IklisngAygavylvrh~~trqrfa~k-iNkq~li---lRn---ilt~a~npfvv--------------------- 135 (1205)
T KOG0606|consen 84 DFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLI---LRN---ILTFAGNPFVV--------------------- 135 (1205)
T ss_pred ccceeEeeccCCCCceeeeeccccccchhhc-ccccchh---hhc---cccccCCccee---------------------
Confidence 45667889999999999998654 6778884 3332211 111 33333444443
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCC---------
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSN--------- 596 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~--------- 596 (736)
|+-...++.-++++... +.+++|||+.++ ++|++|||+.+.......
T Consensus 136 gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~ 207 (1205)
T KOG0606|consen 136 GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIE 207 (1205)
T ss_pred chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchH
Confidence 55555665544444332 788999997643 789999999875422110
Q ss_pred ----cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhc
Q 041821 597 ----SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 597 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (736)
.-....++||+.|+|||++....|+..+|.|++|+|+||.+.|..||..... .+.+..++.....
T Consensus 208 k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp-----eelfg~visd~i~------ 276 (1205)
T KOG0606|consen 208 KDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-----EELFGQVISDDIE------ 276 (1205)
T ss_pred HHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH-----HHHHhhhhhhhcc------
Confidence 0123346899999999999999999999999999999999999999985432 1222222222111
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP 712 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 712 (736)
|.++ ......+..+++.+.|+.+|..|-
T Consensus 277 --wpE~----------dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 277 --WPEE----------DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred --cccc----------CcCCCHHHHHHHHHHHHhChHhhc
Confidence 1111 122234667788899999999995
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.2e-11 Score=118.07 Aligned_cols=118 Identities=18% Similarity=0.242 Sum_probs=96.5
Q ss_pred cccCeeceeEEEEeeeCCCcEEEEEEeCcccc---------cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQ---------GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+.||+|++|.||+|.. .+..++||+...... ....+.+|+.++..+.|++|.....++.+....+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 677899998653211 123577899999999999998888787788888999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC---------------ccEEcccCcccc
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF---------------EPKIADFGLAKL 590 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------~~kl~DFGla~~ 590 (736)
+++++|.+++.... . .+..++.+++.+|.+||+.++ .++|+|||+++.
T Consensus 81 ~~G~~L~~~~~~~~---~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG---M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILSGGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc---H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEECCCEEEEECCcccC
Confidence 99999999886533 2 788999999999999997632 578999998864
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.8e-12 Score=144.26 Aligned_cols=239 Identities=21% Similarity=0.208 Sum_probs=175.6
Q ss_pred HhhhhcccccCeeceeEEEEeeeCC--CcEEEEEEeCccc---ccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLAD--GRAVAVKRLGDLH---QGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 534 (736)
...|.+.+.||+|+|+.|-...... ...+|+|.+.... ...+....|..+-..+. |+|++++++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 3456777889999999998887533 4567777775433 22234455777777776 9999999999999999999
Q ss_pred EEecCCCCCHhhhc-ccCC-CCCHHHHHHHHHHHHHHhhhhh-cC----------------CC-ccEEcccCcccccCC-
Q 041821 535 IYEYVEKQSLDKHL-FSSY-FLGWKERFKVALGTAKGLAYLH-HD----------------EF-EPKIADFGLAKLSQR- 593 (736)
Q Consensus 535 v~e~~~~gsL~~~l-~~~~-~l~~~~~~~i~~~i~~gL~yLH-~~----------------~~-~~kl~DFGla~~~~~- 593 (736)
++||..++++...+ .... ..+...+..++.|+..++.|+| .. .. .+|++|||+|.....
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 99999999999988 5443 6777888899999999999999 32 22 689999999988777
Q ss_pred CCCcceeecccc-cCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 594 GSNSSQFSQIRG-TKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 594 ~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
..........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+........ .+..+
T Consensus 179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~-------~~~~~-------- 243 (601)
T KOG0590|consen 179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG-------RYSSW-------- 243 (601)
T ss_pred CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc-------cceee--------
Confidence 455555666788 9999999999885 457789999999999999999999875432221 00000
Q ss_pred ccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 672 EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 672 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...- ................+++.+++..+|..|.+.+++...
T Consensus 244 ----~~~~--~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 244 ----KSNK--GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred ----cccc--cccccCccccCChhhhhcccccccCCchhcccccccccc
Confidence 0000 000011122233456778888999999999998887543
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.7e-10 Score=131.23 Aligned_cols=118 Identities=18% Similarity=0.198 Sum_probs=93.5
Q ss_pred hcccccCeeceeEEEEeeeCCCcEEEEEEe-Ccc-c-------ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRL-GDL-H-------QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 465 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~-~~~-~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
...+.||+|+||.||+|..... .+++|+. .+. . ...+.+.+|++++++++|++++....++......++|
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv 414 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIV 414 (535)
T ss_pred CccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEE
Confidence 4467899999999999987544 3444432 221 1 1124578999999999999999988888887788999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC---------------ccEEcccCccccc
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF---------------EPKIADFGLAKLS 591 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------~~kl~DFGla~~~ 591 (736)
|||+++++|.+++. ....++.+++++|.|||+.++ .++|+|||+++..
T Consensus 415 ~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~~~~~~liDFGla~~~ 477 (535)
T PRK09605 415 MEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVRDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEECCcEEEEeCcccccC
Confidence 99999999999874 457899999999999997633 6899999999753
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.7e-10 Score=113.75 Aligned_cols=114 Identities=16% Similarity=0.208 Sum_probs=89.7
Q ss_pred ccCeeceeEEEEeeeCCCcEEEEEEeCccc--c-------cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 469 ELGRGGSGAVYKGVLADGRAVAVKRLGDLH--Q-------GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 469 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
.||+|+||.||+|.. ++..+++|...... . ....+.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999995 57889999864321 1 1245778999999999887766665666677789999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC---------------CccEEcccCcccc
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE---------------FEPKIADFGLAKL 590 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~---------------~~~kl~DFGla~~ 590 (736)
++++|.+.+..... .++.+++++|.+||+.+ ..++++|||+++.
T Consensus 80 ~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVRDDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEECCcEEEEECCCCcC
Confidence 99999988754321 78999999999999753 2578999999865
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.7e-10 Score=112.29 Aligned_cols=120 Identities=15% Similarity=0.161 Sum_probs=90.7
Q ss_pred hhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccc-----------------------cHHHHHHHHHHHhcCCCC--c
Q 041821 464 KSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQ-----------------------GEEVFWAEVSTIGKIYHM--N 518 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----------------------~~~~~~~E~~~l~~l~h~--n 518 (736)
+.+.+.||+|+||.||++..++|+.||||++..... ....+..|+.++..+.|+ .
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 677889999999999999987899999998753220 112356789999999887 4
Q ss_pred eeeEEEEEEeCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEE
Q 041821 519 LVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKI 582 (736)
Q Consensus 519 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl 582 (736)
+.+.++. ...++||||+++++|...... .....++.+++.++.++|+.+ ..++|
T Consensus 97 v~~~~~~----~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~l 166 (198)
T cd05144 97 VPKPIDW----NRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYI 166 (198)
T ss_pred CCceeec----CCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEE
Confidence 4445442 345899999999999876431 345678899999999999753 37899
Q ss_pred cccCcccccCC
Q 041821 583 ADFGLAKLSQR 593 (736)
Q Consensus 583 ~DFGla~~~~~ 593 (736)
+|||++.....
T Consensus 167 iDfg~~~~~~~ 177 (198)
T cd05144 167 IDWPQMVSTDH 177 (198)
T ss_pred EECCccccCCC
Confidence 99999965543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.1e-10 Score=94.84 Aligned_cols=67 Identities=10% Similarity=0.055 Sum_probs=54.4
Q ss_pred eeEEeeCCcCccCccccccCCCCHHHHHHHhhc---CCCceeEEeccCCCcceeee-eec-ccceecCCCCceEEEec
Q 041821 290 VKFVGVPNTDFYGFDLNYSQTVSKEACMKLCLD---DCRCSGFSYRLTGQGLCFTK-SVL-FNGFKAPNFPGIIYLKL 362 (736)
Q Consensus 290 ~~f~~~~~~~~~~~~~~~~~~~s~~~C~~~Cl~---nCsC~Ayay~~~g~~~C~~~-~~l-~~~~~~~~~~~~~~ik~ 362 (736)
..|+++.+++.|+.. .+++++|++.|++ ||||+||+|. +.+.+|.+| ++| .+.++....+.++|+|.
T Consensus 9 g~fl~~~~~klpd~~-----~~s~~eC~~~Cl~~~~nCsC~Aya~~-~~~~gC~~W~~~l~~d~~~~~~~g~~Ly~r~ 80 (80)
T cd00129 9 GTTLIKIALKIKTTK-----ANTADECANRCEKNGLPFSCKAFVFA-KARKQCLWFPFNSMSGVRKEFSHGFDLYENK 80 (80)
T ss_pred CeEEEeecccCCccc-----ccCHHHHHHHHhcCCCCCCceeeecc-CCCCCeEEecCcchhhHHhccCCCceeEeEC
Confidence 378888888888654 3689999999999 9999999997 334689998 457 78777766788999983
|
Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. |
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.3e-10 Score=115.73 Aligned_cols=187 Identities=23% Similarity=0.265 Sum_probs=118.1
Q ss_pred HHHhcCCCCceeeEEEEEEeCC-----eEEEEEecCCCCCHhhhcccCC----CCCHHHHHHHHHHHHHHhhhhhcCCC-
Q 041821 509 STIGKIYHMNLVRMWGFCSEGR-----HRLLIYEYVEKQSLDKHLFSSY----FLGWKERFKVALGTAKGLAYLHHDEF- 578 (736)
Q Consensus 509 ~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~----~l~~~~~~~i~~~i~~gL~yLH~~~~- 578 (736)
.-|-.+.|.|||+++.|+.+.+ ...++.|||..|+|.++|++.. .+......+++.||..||.|||+-+-
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 4455667999999999987644 4678999999999999998633 57777888999999999999997521
Q ss_pred ---------ccEEcccCcccccCCCC----------CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhC
Q 041821 579 ---------EPKIADFGLAKLSQRGS----------NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639 (736)
Q Consensus 579 ---------~~kl~DFGla~~~~~~~----------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg 639 (736)
.+-|.-=||.+.-.... .........+-++|.|||.-.....+.++|||+||+..+||..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 01111112211100000 00011223466899999988777788899999999999999987
Q ss_pred CCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 041821 640 IRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719 (736)
Q Consensus 640 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 719 (736)
..-... .+... .++...... +..+-++ .-..++.+|++..|..||+|++++.
T Consensus 279 Eiq~tn----seS~~-----~~ee~ia~~-------i~~len~------------lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 279 EIQSTN----SESKV-----EVEENIANV-------IIGLENG------------LQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred eeccCC----Cccee-----ehhhhhhhh-------eeeccCc------------cccCcCcccccCCCCCCcchhhhhc
Confidence 432110 00000 000000000 0001111 1123667899999999999999987
Q ss_pred HHhc
Q 041821 720 SLLE 723 (736)
Q Consensus 720 ~L~~ 723 (736)
|.-.
T Consensus 331 Hpll 334 (458)
T KOG1266|consen 331 HPLL 334 (458)
T ss_pred Ccee
Confidence 7543
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.1e-09 Score=118.75 Aligned_cols=237 Identities=22% Similarity=0.202 Sum_probs=168.5
Q ss_pred HHHHHHhhhhcccccCe--eceeEEEEeee---CCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCC-CCceeeEEEEE
Q 041821 456 YAELKKSTKSFKEELGR--GGSGAVYKGVL---ADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIY-HMNLVRMWGFC 526 (736)
Q Consensus 456 ~~~i~~~~~~~~~~lG~--G~fg~Vy~~~~---~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 526 (736)
..+.......+.+.+|. |.+|.||.+.. .++..+|+|+-+.. ......-.+|+...++++ |+|.++.+..+
T Consensus 108 ~~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~ 187 (524)
T KOG0601|consen 108 FDSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW 187 (524)
T ss_pred ccchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc
Confidence 44566677788889999 99999999986 34788999985321 122233356777777774 99999999999
Q ss_pred EeCCeEEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHH----HhhhhhcCC-----------------CccEEcc
Q 041821 527 SEGRHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAK----GLAYLHHDE-----------------FEPKIAD 584 (736)
Q Consensus 527 ~~~~~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~----gL~yLH~~~-----------------~~~kl~D 584 (736)
..++..++-+|++. .+|.++..... .++......+..+..+ ||.++|..+ ...+++|
T Consensus 188 e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~d 266 (524)
T KOG0601|consen 188 EGSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTD 266 (524)
T ss_pred ccCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCC
Confidence 99999999999996 78888776544 3777888888888888 999999652 3578999
Q ss_pred cCcccccCCCCCcce---eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHH
Q 041821 585 FGLAKLSQRGSNSSQ---FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFV 661 (736)
Q Consensus 585 FGla~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~ 661 (736)
||+...+........ .....|...|++||...+ .++.+.||||+|.++.|..++..++.........+
T Consensus 267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-------- 337 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-------- 337 (524)
T ss_pred cceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCccc--------
Confidence 999998876653321 123357788999998765 48899999999999999999876654321111100
Q ss_pred HHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 041821 662 REVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719 (736)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 719 (736)
+.... +..++......++..++..|++.+|..|++...+..
T Consensus 338 --------------~r~~~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 --------------LRQGY---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred --------------ccccc---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 11111 111111122234445888999999999999866554
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.9e-09 Score=97.24 Aligned_cols=116 Identities=20% Similarity=0.129 Sum_probs=95.2
Q ss_pred ccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCC--CceeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 467 KEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH--MNLVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
.+.||+|.++.||+++..+ ..+++|....... ...+.+|+.++..++| .++.+++++....+..+++|||++++.+
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 4679999999999999754 7899999866443 5678899999999976 5899999988888889999999998877
Q ss_pred hhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC-------------------CCccEEcccCccccc
Q 041821 545 DKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-------------------EFEPKIADFGLAKLS 591 (736)
Q Consensus 545 ~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~-------------------~~~~kl~DFGla~~~ 591 (736)
..+ +......++.+++++|++||.. +..+++.|||.++..
T Consensus 81 ~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 81 DEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred ccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 654 5667778899999999999963 135788999988643
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.3e-09 Score=100.97 Aligned_cols=122 Identities=16% Similarity=0.150 Sum_probs=81.7
Q ss_pred ccccCeeceeEEEEeeeCCCcEEEEEEeCccccc---HHH----------------------HHHHHHHHhcCCCCc--e
Q 041821 467 KEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQG---EEV----------------------FWAEVSTIGKIYHMN--L 519 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~----------------------~~~E~~~l~~l~h~n--i 519 (736)
.+.||+|+||.||+|...+++.||||++...... ... ...|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999878999999988643211 111 134666666664432 4
Q ss_pred eeEEEEEEeCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhc-CC---------------CccEEc
Q 041821 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH-DE---------------FEPKIA 583 (736)
Q Consensus 520 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~-~~---------------~~~kl~ 583 (736)
.+.+++ ...++||||++++.+........... .++..++.+++.++.++|. .+ ..++|+
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~~~~~~li 156 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVDDGKVYII 156 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEECCcEEEE
Confidence 444443 24589999999854432111111111 6678899999999999998 42 367999
Q ss_pred ccCcccccCC
Q 041821 584 DFGLAKLSQR 593 (736)
Q Consensus 584 DFGla~~~~~ 593 (736)
|||.+.....
T Consensus 157 Dfg~a~~~~~ 166 (187)
T cd05119 157 DVPQAVEIDH 166 (187)
T ss_pred ECcccccccC
Confidence 9999975543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.9e-07 Score=93.12 Aligned_cols=117 Identities=16% Similarity=0.140 Sum_probs=85.6
Q ss_pred cccC-eeceeEEEEeeeCCCcEEEEEEeCccc--------------ccHHHHHHHHHHHhcCCCCce--eeEEEEEEeCC
Q 041821 468 EELG-RGGSGAVYKGVLADGRAVAVKRLGDLH--------------QGEEVFWAEVSTIGKIYHMNL--VRMWGFCSEGR 530 (736)
Q Consensus 468 ~~lG-~G~fg~Vy~~~~~~~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~~ 530 (736)
..|| .||.|+||++... +..++||++.... .....+.+|+.++.+++|++| ++.+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 3577 7888888888874 6789999874311 122457889999999998875 67777654322
Q ss_pred ----eEEEEEecCCC-CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCccc
Q 041821 531 ----HRLLIYEYVEK-QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAK 589 (736)
Q Consensus 531 ----~~~lv~e~~~~-gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~ 589 (736)
..++|||++++ .+|.+++... .++.. .+.+|+.+|.+||+.++ .++|+|||.+.
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~-~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~ 190 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA-PLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGE 190 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC-CCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCcc
Confidence 23599999997 6999887653 45543 35789999999997633 57999999986
Q ss_pred c
Q 041821 590 L 590 (736)
Q Consensus 590 ~ 590 (736)
.
T Consensus 191 ~ 191 (239)
T PRK01723 191 L 191 (239)
T ss_pred c
Confidence 5
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.1e-06 Score=94.53 Aligned_cols=148 Identities=20% Similarity=0.192 Sum_probs=104.0
Q ss_pred eCCCcEEEEEEeCcccc-cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHH
Q 041821 483 LADGRAVAVKRLGDLHQ-GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFK 561 (736)
Q Consensus 483 ~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~ 561 (736)
..++.+|.|+..+.... ......+-++.|+.++||||+++++..+..+..|||+|-+. .|..+++.. ......-
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l---~~~~v~~ 108 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL---GKEEVCL 108 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh---HHHHHHH
Confidence 44688899988865444 23446778899999999999999999999999999999884 566666543 3555666
Q ss_pred HHHHHHHHhhhhhcC-----------------CCccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCcccc
Q 041821 562 VALGTAKGLAYLHHD-----------------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624 (736)
Q Consensus 562 i~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 624 (736)
.+.||+.||.|||++ .+.-||++|-++......... .....---.|..|+.+.... -..
T Consensus 109 Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~--~~~~~~~~s~~~P~~~~~s~--~s~ 184 (690)
T KOG1243|consen 109 GLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAP--AKSLYLIESFDDPEEIDPSE--WSI 184 (690)
T ss_pred HHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcc--cccchhhhcccChhhcCccc--cch
Confidence 789999999999965 235688888777543322110 01111112355555443221 346
Q ss_pred ceechhHHHHHHHhC
Q 041821 625 DVYSYGVVILEMVKG 639 (736)
Q Consensus 625 DvwS~Gvvl~el~tg 639 (736)
|.|-||++++|++.|
T Consensus 185 D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 185 DSWGLGCLIEELFNG 199 (690)
T ss_pred hhhhHHHHHHHHhCc
Confidence 999999999999999
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.3e-07 Score=100.95 Aligned_cols=231 Identities=19% Similarity=0.142 Sum_probs=158.0
Q ss_pred HhhhhcccccCeeceeEEEEeee--CCCcEEEEEEeCccccc---HHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL--ADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 534 (736)
..++.++..||.|.|+.|++... .++..+++|.+.+.... +..-+.|+.+...+ .|.++++....+...+..+|
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI 343 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence 34566778899999999999874 35788999988653221 12235677777666 59999999888888888889
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC-----------------CccEEcccCcccccCCCCCc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE-----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
=.|||.++++...+.-...+++..++++..|++.++.++|+.. +.-++.|||.+.-+.-..
T Consensus 344 p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~-- 421 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSS-- 421 (524)
T ss_pred chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccceec--
Confidence 9999999998877644446888899999999999999999641 455788888875321111
Q ss_pred ceeecccccCcc-cChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 598 SQFSQIRGTKGY-MAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 598 ~~~~~~~gt~~y-~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
......+..| .+|+.....++..++|++|||..+.|.+++......... .
T Consensus 422 --~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---------------------------~ 472 (524)
T KOG0601|consen 422 --GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---------------------------S 472 (524)
T ss_pred --ccccccccccccchhhccccccccccccccccccccccccCcccCccccc---------------------------c
Confidence 1111123334 366666778899999999999999999998654321100 1
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
..+..... ...+. ....+..+...++..++..||.+.++..+.+-.
T Consensus 473 ~~i~~~~~-p~~~~-~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 473 LTIRSGDT-PNLPG-LKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred eeeecccc-cCCCc-hHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 11111111 01111 124555666778999999999998887766544
|
|
| >smart00108 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.3e-06 Score=75.86 Aligned_cols=73 Identities=27% Similarity=0.504 Sum_probs=56.9
Q ss_pred EeeCCcEEEEeCC-CcEEEeCCCCCC--CcceEEEccCCCeEEEccCCceeeeecCCCCCccCCCcccCCCceEEecCCC
Q 041821 48 LRRNGAMVLTDVD-DTVIWMTNTTST--GADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLISGVGN 124 (736)
Q Consensus 48 l~~~G~L~l~~~~-~~~vWstn~~~~--~~~~a~LldsGNlVl~~~~~~~lWqSFd~PTDTlLpg~~l~~~~~L~S~~s~ 124 (736)
...+|+||+.+.. +.++|++|+... ....+.|.++|||||++.++.++|+|=.. +
T Consensus 26 ~q~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~t~------~---------------- 83 (114)
T smart00108 26 MQNDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRVVWSSNTT------G---------------- 83 (114)
T ss_pred CCCCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCCCCEEEEeccc------C----------------
Confidence 3468999999865 589999998632 23578999999999999989999998221 1
Q ss_pred CCCCCCcceEEEcCCCceEEE
Q 041821 125 GTYASGYFSLYFDNDNVLRLI 145 (736)
Q Consensus 125 ~d~s~G~~~l~~~~~g~~~~~ 145 (736)
..|.+.+.++.+|.++++
T Consensus 84 ---~~~~~~~~L~ddGnlvl~ 101 (114)
T smart00108 84 ---ANGNYVLVLLDDGNLVIY 101 (114)
T ss_pred ---CCCceEEEEeCCCCEEEE
Confidence 245678999999999875
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.2e-07 Score=108.41 Aligned_cols=226 Identities=17% Similarity=0.149 Sum_probs=148.5
Q ss_pred cccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 466 FKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 466 ~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
+.+-+-+|.++.+..++- ..+...++|...... ...+..+.+-.++-..+||-+++..--+......+|+++|..
T Consensus 808 i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~ 887 (1205)
T KOG0606|consen 808 ITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLN 887 (1205)
T ss_pred ecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhc
Confidence 344677788888887762 234444444442211 112223333334444456777766555556677899999999
Q ss_pred CCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCC----------
Q 041821 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRG---------- 594 (736)
Q Consensus 541 ~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~---------- 594 (736)
+++|...|+..+..+..-+...+..+..+++|||.. ....+++|||+......-
T Consensus 888 ~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~ 967 (1205)
T KOG0606|consen 888 GGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPS 967 (1205)
T ss_pred cCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcCCccccc
Confidence 999999998877777777778888899999999965 336789999854322110
Q ss_pred ---------------CC----cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchh
Q 041821 595 ---------------SN----SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEA 655 (736)
Q Consensus 595 ---------------~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~ 655 (736)
.. ........||+.|.|||.+.+......+|.|++|++++|.++|.+||.......
T Consensus 968 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~----- 1042 (1205)
T KOG0606|consen 968 SSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQ----- 1042 (1205)
T ss_pred ccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhh-----
Confidence 00 011234679999999999999999999999999999999999999997543211
Q ss_pred HHHHHHHHHHHHHhhhccccccccccCcc-CCCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 041821 656 ELKRFVREVKRKILYEEEAWIEEIVDPRL-KGKFNTNQAATLIGIGISCVDEDRSKRPTMD 715 (736)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 715 (736)
+ +..++...+ ...-+........+++...+..+|.+|..|.
T Consensus 1043 --------~-----------f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1043 --------I-----------FENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred --------h-----------hhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 1 111111111 1112333445566677788889999997665
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.2e-06 Score=96.49 Aligned_cols=123 Identities=20% Similarity=0.148 Sum_probs=77.7
Q ss_pred cccCeeceeEEEEeeeCCCcEEEEEEeCcccccH-----------------------------------------HHHHH
Q 041821 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE-----------------------------------------EVFWA 506 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~-----------------------------------------~~~~~ 506 (736)
+.||.|++|.||+|++++|+.||||+........ -.|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 3699999999999999999999999985421000 01445
Q ss_pred HHHHHhcCC----CCceeeEEEEEE-eCCeEEEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHH-hhhhhcC---
Q 041821 507 EVSTIGKIY----HMNLVRMWGFCS-EGRHRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKG-LAYLHHD--- 576 (736)
Q Consensus 507 E~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~g-L~yLH~~--- 576 (736)
|++.+.++. |.+-+.+-..+. .....+|||||+++++|.+..... ...+ +..++.++++. +..+|..
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~~ 279 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGFF 279 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCce
Confidence 666555542 333334333332 234578999999999998876432 1222 23444444442 3444433
Q ss_pred -------------CCccEEcccCcccccCC
Q 041821 577 -------------EFEPKIADFGLAKLSQR 593 (736)
Q Consensus 577 -------------~~~~kl~DFGla~~~~~ 593 (736)
+.+++|+|||++..+..
T Consensus 280 H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 280 HADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred eCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 34789999999976643
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >smart00473 PAN_AP divergent subfamily of APPLE domains | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.1e-06 Score=69.27 Aligned_cols=71 Identities=32% Similarity=0.493 Sum_probs=52.4
Q ss_pred eeEEeeCCcCccCccccccCCCCHHHHHHHhhc-CCCceeEEeccCCCcceeeee--ecccceecCCCCceEEEe
Q 041821 290 VKFVGVPNTDFYGFDLNYSQTVSKEACMKLCLD-DCRCSGFSYRLTGQGLCFTKS--VLFNGFKAPNFPGIIYLK 361 (736)
Q Consensus 290 ~~f~~~~~~~~~~~~~~~~~~~s~~~C~~~Cl~-nCsC~Ayay~~~g~~~C~~~~--~l~~~~~~~~~~~~~~ik 361 (736)
..|+.++++.++..........++++|++.|++ +|+|.||.|.. +++.|.+|. .+.+....++.+.++|.|
T Consensus 4 ~~f~~~~~~~l~~~~~~~~~~~s~~~C~~~C~~~~~~C~s~~y~~-~~~~C~l~~~~~~~~~~~~~~~~~~~y~~ 77 (78)
T smart00473 4 DCFVRLPNTKLPGFSRIVISVASLEECASKCLNSNCSCRSFTYNN-GTKGCLLWSESSLGDARLFPSGGVDLYEK 77 (78)
T ss_pred ceeEEecCccCCCCcceeEcCCCHHHHHHHhCCCCCceEEEEEcC-CCCEEEEeeCCccccceecccCCceeEEe
Confidence 468899999987554333456799999999999 99999999973 678999886 355555344444555554
|
Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions. |
| >cd00028 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Probab=98.24 E-value=5.4e-06 Score=73.71 Aligned_cols=80 Identities=25% Similarity=0.465 Sum_probs=60.5
Q ss_pred CCcEEEEeCC-CcEEEeCCCCC--CCcceEEEccCCCeEEEccCCceeeeecCCCCCccCCCcccCCCceEEecCCCCCC
Q 041821 51 NGAMVLTDVD-DTVIWMTNTTS--TGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLISGVGNGTY 127 (736)
Q Consensus 51 ~G~L~l~~~~-~~~vWstn~~~--~~~~~a~LldsGNlVl~~~~~~~lWqSFd~PTDTlLpg~~l~~~~~L~S~~s~~d~ 127 (736)
+|+||+.+.. ++++|++|+.. .....+.|.++|||||++.++.++|||-...
T Consensus 30 dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~~~~------------------------- 84 (116)
T cd00028 30 DYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWSSNTTR------------------------- 84 (116)
T ss_pred eEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcCCCcEEEEecccC-------------------------
Confidence 8999999765 58999999864 3456789999999999999999999975320
Q ss_pred CCCcceEEEcCCCceEEEecCCCccceecCC
Q 041821 128 ASGYFSLYFDNDNVLRLIYDGPEISSVYWPD 158 (736)
Q Consensus 128 s~G~~~l~~~~~g~~~~~~~~~~~~~~yw~~ 158 (736)
..+.+.+.|+.+|.+.++-.. ..+.|.+
T Consensus 85 ~~~~~~~~L~ddGnlvl~~~~---~~~~W~S 112 (116)
T cd00028 85 VNGNYVLVLLDDGNLVLYDSD---GNFLWQS 112 (116)
T ss_pred CCCceEEEEeCCCCEEEECCC---CCEEEcC
Confidence 245688999999999875321 2345654
|
The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=98.20 E-value=9.3e-07 Score=98.71 Aligned_cols=125 Identities=16% Similarity=0.137 Sum_probs=82.0
Q ss_pred cccCeeceeEEEEeeeCC-CcEEEEEEeCccccc-----------------------------------HH------HHH
Q 041821 468 EELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQG-----------------------------------EE------VFW 505 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~-----------------------------------~~------~~~ 505 (736)
+.||.|++|.||+|++++ |+.||||++.+.... .+ .+.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 469999999999999877 999999999643100 01 134
Q ss_pred HHHHHHhcCC----CCceeeEEEEEEe-CCeEEEEEecCCCCCHhhh--cccCC----CCCHHHHHHHHHHHHHHhhhhh
Q 041821 506 AEVSTIGKIY----HMNLVRMWGFCSE-GRHRLLIYEYVEKQSLDKH--LFSSY----FLGWKERFKVALGTAKGLAYLH 574 (736)
Q Consensus 506 ~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~--l~~~~----~l~~~~~~~i~~~i~~gL~yLH 574 (736)
+|+..+.+++ +.+.+.+-.++.+ ....+|||||++|+.|.+. +...+ .+....+..++.|+.+ -.+.|
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~-~GffH 283 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFR-DGFFH 283 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHh-CCeee
Confidence 4555444442 4444554444433 4567899999999999864 32222 2444445566677765 45666
Q ss_pred cC----------CC----ccEEcccCcccccCC
Q 041821 575 HD----------EF----EPKIADFGLAKLSQR 593 (736)
Q Consensus 575 ~~----------~~----~~kl~DFGla~~~~~ 593 (736)
.+ +. ++++.|||++..+..
T Consensus 284 aDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 284 ADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred CCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 43 33 789999999987654
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.4e-05 Score=85.45 Aligned_cols=149 Identities=20% Similarity=0.236 Sum_probs=102.6
Q ss_pred eeEEEEee-eCCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEe----CCeEEEEEecCCC-CCHhhh
Q 041821 475 SGAVYKGV-LADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE----GRHRLLIYEYVEK-QSLDKH 547 (736)
Q Consensus 475 fg~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~-gsL~~~ 547 (736)
-.+.||+. ..+|..+++|++...+ +.......=+++++++.|+|||++.+++.. +..+++||+|.|+ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 35778988 5579999999994322 111123345788999999999999998863 4567899999986 567665
Q ss_pred ccc---------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCcc----------------EEcccCcccccCCCCC
Q 041821 548 LFS---------------SYFLGWKERFKVALGTAKGLAYLHHDEFEP----------------KIADFGLAKLSQRGSN 596 (736)
Q Consensus 548 l~~---------------~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~----------------kl~DFGla~~~~~~~~ 596 (736)
-.. ....++...+.++.|+..||.++|+.++-+ +|+-.|....+..+..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~~ 448 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDPT 448 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecCCCC
Confidence 432 125678899999999999999999987644 3443333333322210
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCC
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRL 642 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p 642 (736)
|-+. --.+-|.=.||.+++.|.+|...
T Consensus 449 ----------------~~le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 449 ----------------EPLE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred ----------------cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 1111 12356888899999999999643
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.15 E-value=6.1e-06 Score=82.56 Aligned_cols=109 Identities=20% Similarity=0.235 Sum_probs=87.5
Q ss_pred cccCeeceeEEEEeeeCCCcEEEEEEeCcccc--cHHHHHHHHHHHhcCCC--CceeeEEEEEEeCC---eEEEEEecCC
Q 041821 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQ--GEEVFWAEVSTIGKIYH--MNLVRMWGFCSEGR---HRLLIYEYVE 540 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~---~~~lv~e~~~ 540 (736)
+.|+.|..+.||+++..+|+.+++|....... ....+.+|+++++.+.+ .++.+++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 46899999999999986678999999865432 34567899999999975 44677777766543 5689999999
Q ss_pred CCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC
Q 041821 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE 577 (736)
Q Consensus 541 ~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~ 577 (736)
+.++.+.+.. ..++..+...++.++++.|..||+-.
T Consensus 84 G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~ 119 (223)
T cd05154 84 GRVLRDRLLR-PELSPEERRALARALADTLAALHSVD 119 (223)
T ss_pred CEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 9988876642 35788899999999999999999865
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=98.09 E-value=6.7e-06 Score=78.52 Aligned_cols=99 Identities=18% Similarity=0.080 Sum_probs=70.5
Q ss_pred cccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCcee-eEEEEEEeCCeEEEEEecCCCCCHhh
Q 041821 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLV-RMWGFCSEGRHRLLIYEYVEKQSLDK 546 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~gsL~~ 546 (736)
+.|+.|.++.||+++.. +..+++|...........+.+|+.+++.+.+.+++ +++.+. ....++||||+++.++..
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~ 80 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLT 80 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccc
Confidence 56889999999999874 77899999865433334467899999988665544 455443 334579999999988765
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHhhhhhcCC
Q 041821 547 HLFSSYFLGWKERFKVALGTAKGLAYLHHDE 577 (736)
Q Consensus 547 ~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~ 577 (736)
.. .....++.+++++|+.||...
T Consensus 81 ~~--------~~~~~~~~~l~~~l~~LH~~~ 103 (170)
T cd05151 81 ED--------FSDPENLEKIAKLLKKLHSSP 103 (170)
T ss_pred cc--------ccCHHHHHHHHHHHHHHhCCC
Confidence 31 111345678899999999754
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.88 E-value=4.4e-06 Score=91.20 Aligned_cols=172 Identities=17% Similarity=0.073 Sum_probs=124.7
Q ss_pred cccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCc-eeeEEEEEEeCCeEEEEEecCCCC-C
Q 041821 466 FKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMN-LVRMWGFCSEGRHRLLIYEYVEKQ-S 543 (736)
Q Consensus 466 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~~~g-s 543 (736)
+-..+++|++++++|.+-...+....+.+... ....-++++|.+++||| .+..++-+..++..+++++++..+ +
T Consensus 246 ~fh~fvK~altknpKkRptaeklL~h~fvs~~----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs 321 (829)
T KOG0576|consen 246 FFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRS 321 (829)
T ss_pred HHHHHHHHHhcCCCccCCChhhheeceeeccc----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcc
Confidence 34467889999999988433344445555332 33456889999999999 777788888888899999999877 2
Q ss_pred H-hhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC-----------CccEEcccCcccccCCCCCcceeecccccCcccC
Q 041821 544 L-DKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE-----------FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611 (736)
Q Consensus 544 L-~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-----------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~a 611 (736)
- .......-.+...+...+.+.-.++|+|||+.. -..|..||+.+..+.... ......+|+.++|
T Consensus 322 ~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d~~l~s~~~~~~~~~~v~~~L~~~~---~~~t~~~~~~~~~ 398 (829)
T KOG0576|consen 322 SALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRDNILGSEEEVKLLDFAVPPQLTRTM---KPRTAIGTPEPLA 398 (829)
T ss_pred ccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcccccccccccccccccCCcccCccc---ccccCCCCCCCCC
Confidence 2 211111113334444556677788999999761 246899999987765543 2455679999999
Q ss_pred hhcccCCCCccccceechhHHHHHHHhCCCCCC
Q 041821 612 PEWASNLPITAKVDVYSYGVVILEMVKGIRLSN 644 (736)
Q Consensus 612 PE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~ 644 (736)
||+.....+..+.|+|+.|+-..+|.-|.+|-.
T Consensus 399 pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 399 PEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred chhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 999999999999999999998778877766643
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00028 Score=68.43 Aligned_cols=121 Identities=8% Similarity=0.057 Sum_probs=82.1
Q ss_pred cccCeeceeEEEEeeeCC-------CcEEEEEEeCccc-----------------------ccHHHH----HHHHHHHhc
Q 041821 468 EELGRGGSGAVYKGVLAD-------GRAVAVKRLGDLH-----------------------QGEEVF----WAEVSTIGK 513 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~~~~~~-----------------------~~~~~~----~~E~~~l~~ 513 (736)
..||.|--+.||.|...+ +..+|||+.+... ...+.+ .+|++.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 478999999999998543 4799999863210 001122 379999998
Q ss_pred CCC--CceeeEEEEEEeCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhh-hcC--------------
Q 041821 514 IYH--MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL-HHD-------------- 576 (736)
Q Consensus 514 l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yL-H~~-------------- 576 (736)
+.. -++.+++++ ..-+|||||+.+..+.........++..+...+..+++.+|..| |..
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~ 158 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLW 158 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 853 455666654 45689999997654432211222355566778889999999988 654
Q ss_pred -CCccEEcccCcccccC
Q 041821 577 -EFEPKIADFGLAKLSQ 592 (736)
Q Consensus 577 -~~~~kl~DFGla~~~~ 592 (736)
+..+.|+|||.+....
T Consensus 159 ~~~~v~iIDF~qav~~~ 175 (197)
T cd05146 159 HDGKVWFIDVSQSVEPT 175 (197)
T ss_pred ECCcEEEEECCCceeCC
Confidence 2378999999987553
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins | Back alignment and domain information |
|---|
Probab=97.55 E-value=9.1e-05 Score=59.68 Aligned_cols=49 Identities=39% Similarity=0.592 Sum_probs=38.6
Q ss_pred eCCcCccCccccccCCCCHHHHHHHhhcCCCceeEEeccCCCcceeeeee
Q 041821 295 VPNTDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKSV 344 (736)
Q Consensus 295 ~~~~~~~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~g~~~C~~~~~ 344 (736)
+++++++..+.......+.++|+..|+.||+|.||.|. .+.+.|++|..
T Consensus 9 ~~~~~~~g~d~~~~~~~s~~~Cq~~C~~~~~C~afT~~-~~~~~C~lk~~ 57 (73)
T cd01100 9 GSNVDFRGGDLSTVFASSAEQCQAACTADPGCLAFTYN-TKSKKCFLKSS 57 (73)
T ss_pred cCCCccccCCcceeecCCHHHHHHHcCCCCCceEEEEE-CCCCeEEcccC
Confidence 35666666665544466899999999999999999997 56788998764
|
PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. |
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00056 Score=64.38 Aligned_cols=115 Identities=18% Similarity=0.247 Sum_probs=81.5
Q ss_pred cccCeeceeEEEEeeeCCCcEEEEEE-eCcccc--------cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 468 EELGRGGSGAVYKGVLADGRAVAVKR-LGDLHQ--------GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~~~vavK~-~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
..+++|+-+.+|.+.+. |.++++|. +++... ..+.-.+|+++|.++.--.|....=+..+.+...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999763 44566664 333211 123457899999998655554444456677888999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC---------------ccEEcccCcccc
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF---------------EPKIADFGLAKL 590 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------~~kl~DFGla~~ 590 (736)
+++..|.+.+... ...++..+-+-+.-||..++ .+.++||||+..
T Consensus 81 I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGRIYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCcEEEEECCcccc
Confidence 9999998888654 24556666666777887643 589999999974
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00056 Score=80.26 Aligned_cols=181 Identities=20% Similarity=0.170 Sum_probs=126.0
Q ss_pred HHHHHHHHhcCCCCceeeEEEEEEeCCeEE----EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-
Q 041821 504 FWAEVSTIGKIYHMNLVRMWGFCSEGRHRL----LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF- 578 (736)
Q Consensus 504 ~~~E~~~l~~l~h~niv~l~~~~~~~~~~~----lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~- 578 (736)
...|...+.++.|+|++.++.|-......- +..|+++.-++...+..-..++....+.+..++.+||.|+|+...
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~ 308 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSLE 308 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhccc
Confidence 345777888899999999999876654433 456889999999998888889999999999999999999997522
Q ss_pred ------------------ccEEc--ccCcccccCCCCCcceeecccccCcccChhcccCCCCcc--ccceechhHHHHHH
Q 041821 579 ------------------EPKIA--DFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITA--KVDVYSYGVVILEM 636 (736)
Q Consensus 579 ------------------~~kl~--DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~--~~DvwS~Gvvl~el 636 (736)
...++ ||+..+....... .....-+..+.|||......+.. ..|+|.+|..+..+
T Consensus 309 ~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~---~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~ 385 (1351)
T KOG1035|consen 309 HVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK---SFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQL 385 (1351)
T ss_pred eeEEecccccccccCccceeecchhhhcccccCCCccc---chhhcCccccccccccccccchhhhhhHHHHHHHHHhhh
Confidence 23344 7777665543322 11223455677888877666554 47999999999999
Q ss_pred HhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 041821 637 VKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDS 716 (736)
Q Consensus 637 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 716 (736)
..|..+..... . ...+++.. .. ..+.+...+|+..++++|+++.+
T Consensus 386 ~~~~~i~~~~~------------~---------------~~~~l~~~----~~----~~~~d~~~~~~~~~~~~Rl~~~~ 430 (1351)
T KOG1035|consen 386 SQGEDISEKSA------------V---------------PVSLLDVL----ST----SELLDALPKCLDEDSEERLSALE 430 (1351)
T ss_pred hhcCccccccc------------c---------------hhhhhccc----cc----hhhhhhhhhhcchhhhhccchhh
Confidence 98865432110 0 11111110 11 13556677899999999999999
Q ss_pred HHHHHh
Q 041821 717 VVQSLL 722 (736)
Q Consensus 717 vl~~L~ 722 (736)
++.+.-
T Consensus 431 ll~~~f 436 (1351)
T KOG1035|consen 431 LLTHPF 436 (1351)
T ss_pred hhhchh
Confidence 998753
|
|
| >PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0013 Score=58.09 Aligned_cols=74 Identities=23% Similarity=0.405 Sum_probs=51.0
Q ss_pred CceEEEecC-CCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCCCcceEEEcc--CCCeEEEccCCceeeeecCCCC
Q 041821 27 RTVVWTANR-DRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGADRAELLD--TGNLVLKDRHGKILWQSFDYPT 103 (736)
Q Consensus 27 ~tvVW~Anr-~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~~~~~a~Lld--sGNlVl~~~~~~~lWqSFd~PT 103 (736)
.++||..+. ..... ....+.|..+|||||.|..+.++|++.. ......+...+ .||++ +.....++|.|=+.|+
T Consensus 38 ~~~iWss~~t~~~~~-~~~~~~L~~~GNlvl~d~~~~~lW~Sf~-~ptdt~L~~q~l~~~~~~-~~~~~~~sw~s~~dps 114 (114)
T PF01453_consen 38 GSVIWSSNNTSGRGN-SGCYLVLQDDGNLVLYDSSGNVLWQSFD-YPTDTLLPGQKLGDGNVT-GKNDSLTSWSSNTDPS 114 (114)
T ss_dssp TEEEEE--S-TTSS--SSEEEEEETTSEEEEEETTSEEEEESTT-SSS-EEEEEET--TSEEE-EESTSSEEEESS----
T ss_pred CCEEEEecccCCccc-cCeEEEEeCCCCEEEEeecceEEEeecC-CCccEEEeccCcccCCCc-cccceEEeECCCCCCC
Confidence 577999933 33321 4678999999999999999999999943 23445566666 88888 6666789999877663
|
Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B .... |
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0018 Score=60.81 Aligned_cols=123 Identities=15% Similarity=0.228 Sum_probs=84.4
Q ss_pred ccccCeeceeEEEEeeeCCCcEEEEEE-eCcc--------cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 467 KEELGRGGSGAVYKGVLADGRAVAVKR-LGDL--------HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~~~~~~vavK~-~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
...|-+|+-+.|+++.+ .|+...||. +.+. .-..++..+|++.|.+++--.|.--.=++.+...-.|+||
T Consensus 12 l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 12 LELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred ceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence 45788999999999998 467767764 3221 1123456789999999864444444445666667789999
Q ss_pred cCCC-CCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCcccc
Q 041821 538 YVEK-QSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAKL 590 (736)
Q Consensus 538 ~~~~-gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~~ 590 (736)
|+++ .++.+++...- ....+....++..|-+.+.-||.+++ .+-++|||++..
T Consensus 91 ~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 91 FIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred eccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 9986 37777776532 22222236788888888999997643 458999999753
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0032 Score=66.17 Aligned_cols=248 Identities=16% Similarity=0.152 Sum_probs=138.4
Q ss_pred hcccccCeeceeEEEEee-eCCCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEE-------EeCCeEEEE
Q 041821 465 SFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFC-------SEGRHRLLI 535 (736)
Q Consensus 465 ~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~-------~~~~~~~lv 535 (736)
...+.||+|+-+.+|-.- .. ..| -|+........+. +-+..|... .||-+-.=+.+= ..+...-++
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~--d~V-AKIYh~Pppa~~a--qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl 88 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVR--DQV-AKIYHAPPPAAQA--QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL 88 (637)
T ss_pred CCCccccCCccceeeecchhh--chh-heeecCCCchHHH--HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence 356789999999999643 21 223 3666443221111 122333333 455433211110 112225577
Q ss_pred EecCCCCC-Hhhhcc------cCCCCCHHHHHHHHHHHHHHhhhhhcCCC--------ccEEcccCcccccCCCCCcc--
Q 041821 536 YEYVEKQS-LDKHLF------SSYFLGWKERFKVALGTAKGLAYLHHDEF--------EPKIADFGLAKLSQRGSNSS-- 598 (736)
Q Consensus 536 ~e~~~~gs-L~~~l~------~~~~l~~~~~~~i~~~i~~gL~yLH~~~~--------~~kl~DFGla~~~~~~~~~~-- 598 (736)
|..+++.. +..++. +....+|...++.++.+|.+.+-||..+. ...++|=+..++++.+....
T Consensus 89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ 168 (637)
T COG4248 89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINA 168 (637)
T ss_pred cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeecc
Confidence 77776542 222221 11257899999999999999999998754 45778877777776554322
Q ss_pred ---eeecccccCcccChhccc-----CCCCccccceechhHHHHHHHhC-CCCCCccccCCccc---hhHHHHHHHHHHH
Q 041821 599 ---QFSQIRGTKGYMAPEWAS-----NLPITAKVDVYSYGVVILEMVKG-IRLSNWVVEDGEGQ---EAELKRFVREVKR 666 (736)
Q Consensus 599 ---~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~el~tg-~~p~~~~~~~~~~~---~~~~~~~~~~~~~ 666 (736)
.....+|...|.+||.-. +..-+...|-|.+||++++++.| +.||.....-.+.. +..+...
T Consensus 169 ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g------ 242 (637)
T COG4248 169 NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG------ 242 (637)
T ss_pred CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc------
Confidence 233467899999999754 33457789999999999999987 88987543221111 1011100
Q ss_pred HHhhhccccccccccCccCCCCCHH-HHHHHHHHHHHcccC--CCCCCCCHHHHHHHHhcccc
Q 041821 667 KILYEEEAWIEEIVDPRLKGKFNTN-QAATLIGIGISCVDE--DRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 667 ~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~l~~li~~cl~~--dP~~RPs~~evl~~L~~~~~ 726 (736)
.+.+... ...-..+.. .+.+.. .+..+..|..+|+.. ++.-|||++.=+..|..+.+
T Consensus 243 ~f~ya~~--~~~g~~p~P-~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 243 RFAYASD--QRRGLKPPP-RSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred eeeechh--ccCCCCCCC-CCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 0000000 000000100 112221 233455566677764 36789999888777766544
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.00032 Score=78.03 Aligned_cols=135 Identities=20% Similarity=0.191 Sum_probs=81.7
Q ss_pred HHHHHHHhhhhhcC-----------------CCccEEcccCcccccCCCCCcc------e-eecccccCcccChhcccCC
Q 041821 563 ALGTAKGLAYLHHD-----------------EFEPKIADFGLAKLSQRGSNSS------Q-FSQIRGTKGYMAPEWASNL 618 (736)
Q Consensus 563 ~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~~~~~~~~~~------~-~~~~~gt~~y~aPE~~~~~ 618 (736)
+.+++.||.|+|.+ +...||+-|+.+.......... . ..-..-...|.|||++...
T Consensus 105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred hhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 44566999999965 2245899998876544321110 0 0112235689999999998
Q ss_pred CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHH
Q 041821 619 PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIG 698 (736)
Q Consensus 619 ~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~ 698 (736)
..+.++|++|+|+++|.+..|.++......... ... .....+..-...++.+.+.++.+
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~-----~~~----------------~~~~~~~~~~~~~s~~~p~el~~ 243 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL-----SYS----------------FSRNLLNAGAFGYSNNLPSELRE 243 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcc-----hhh----------------hhhcccccccccccccCcHHHHH
Confidence 889999999999999999955544321111000 000 00001111111122344556777
Q ss_pred HHHHcccCCCCCCCCHHHHH
Q 041821 699 IGISCVDEDRSKRPTMDSVV 718 (736)
Q Consensus 699 li~~cl~~dP~~RPs~~evl 718 (736)
=+.+++..++.-||++.++.
T Consensus 244 ~l~k~l~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 244 SLKKLLNGDSAVRPTLDLLL 263 (700)
T ss_pred HHHHHhcCCcccCcchhhhh
Confidence 77889999999999777654
|
|
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.016 Score=54.40 Aligned_cols=119 Identities=19% Similarity=0.269 Sum_probs=76.6
Q ss_pred hcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceee-EEEEEEeCCeEEEEEecCCCCC
Q 041821 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVR-MWGFCSEGRHRLLIYEYVEKQS 543 (736)
Q Consensus 465 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~~~~~~lv~e~~~~gs 543 (736)
+..+.|++|.+|.||+|.+. +..+|+|+-.. ......+..|+++|..+.-.++.. ++.|-. -.+.|||+.|-.
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~-ds~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i~G~~ 98 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWR-GGEVALKVRRR-DSPRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYIDGRP 98 (201)
T ss_pred hhhhhhhcccccEEEEeecc-CceEEEEEecC-CcchhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhhcCcc
Confidence 34568999999999999985 55888887643 344566889999999987655533 444432 245599999888
Q ss_pred HhhhcccCCCCCHHHHHHHHHH--HHHHhhhhhcC-----------CCccEEcccCcccccC
Q 041821 544 LDKHLFSSYFLGWKERFKVALG--TAKGLAYLHHD-----------EFEPKIADFGLAKLSQ 592 (736)
Q Consensus 544 L~~~l~~~~~l~~~~~~~i~~~--i~~gL~yLH~~-----------~~~~kl~DFGla~~~~ 592 (736)
|.+.-... +-++...++.. ++..+--.|.+ +..+-|+||--|....
T Consensus 99 L~~~~~~~---~rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k~ 157 (201)
T COG2112 99 LGKLEIGG---DRKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFKK 157 (201)
T ss_pred hhhhhhcc---cHHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhhcc
Confidence 88765321 33333333322 12222223432 2378999999987443
|
|
| >PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2 | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.015 Score=56.21 Aligned_cols=113 Identities=25% Similarity=0.330 Sum_probs=77.4
Q ss_pred hhhhcccccCeece-eEEEEeeeCCCcEEEEEEeCc-----c-------c----------ccHHHHHHHHHHHhcCC---
Q 041821 462 STKSFKEELGRGGS-GAVYKGVLADGRAVAVKRLGD-----L-------H----------QGEEVFWAEVSTIGKIY--- 515 (736)
Q Consensus 462 ~~~~~~~~lG~G~f-g~Vy~~~~~~~~~vavK~~~~-----~-------~----------~~~~~~~~E~~~l~~l~--- 515 (736)
..+++.+.||.|.- |.||++++ +|+.+|+|.+.. . . .....|..|.+...+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 67889999999999 99999999 578999999311 0 0 01124778999888775
Q ss_pred CCce--eeEEEEEEeC------------------CeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhc
Q 041821 516 HMNL--VRMWGFCSEG------------------RHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH 575 (736)
Q Consensus 516 h~ni--v~l~~~~~~~------------------~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~ 575 (736)
+.++ |+.+||..-. ....||.||.+... .+... -+.+|.+-|..+|.
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~~----~~~~~~~dl~~~~k 182 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQIR----DIPQMLRDLKILHK 182 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccchh----HHHHHHHHHHHHHH
Confidence 5566 9999987432 12357888776433 12233 34556666777887
Q ss_pred CCC-----------ccEEcccCcc
Q 041821 576 DEF-----------EPKIADFGLA 588 (736)
Q Consensus 576 ~~~-----------~~kl~DFGla 588 (736)
.++ .-||+|||.+
T Consensus 183 ~gI~~~Dv~~~ny~~G~lvDfs~~ 206 (207)
T PF13095_consen 183 LGIVPRDVKPRNYRGGKLVDFSSS 206 (207)
T ss_pred CCeeeccCccccccCCEEEecccC
Confidence 654 4489999864
|
|
| >PLN02876 acyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.015 Score=70.01 Aligned_cols=110 Identities=18% Similarity=0.261 Sum_probs=81.1
Q ss_pred ccccCeeceeEEEEeeeCCC---cEEEEEEeCccc--ccHHHHHHHHHHHhcCC-CCce--eeEEEEEEeC---CeEEEE
Q 041821 467 KEELGRGGSGAVYKGVLADG---RAVAVKRLGDLH--QGEEVFWAEVSTIGKIY-HMNL--VRMWGFCSEG---RHRLLI 535 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~~~~---~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-h~ni--v~l~~~~~~~---~~~~lv 535 (736)
.+.|+.|.+..+|+.....+ ..+++|+..... .....+.+|+++|+.+. |.+| .+++.+|.+. +..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 45689999999999886553 467888765422 23456889999999995 6665 7888888764 467899
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF 578 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~ 578 (736)
|||+++..+.+.. -..++..++..++.++++.|..||.-+.
T Consensus 123 ME~v~G~~~~~~~--~~~~~~~~r~~l~~~l~~~La~LH~vd~ 163 (822)
T PLN02876 123 MEYLEGRIFVDPK--LPGVAPERRRAIYRATAKVLAALHSADV 163 (822)
T ss_pred EEecCCcccCCcc--CCCCCHHHHHHHHHHHHHHHHHHhCCCc
Confidence 9999975543211 1135677888999999999999998654
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0058 Score=68.21 Aligned_cols=127 Identities=18% Similarity=0.166 Sum_probs=79.9
Q ss_pred cc-cccCeeceeEEEEeeeCCCcEEEEEEeCcccccH-------------------------------H----------H
Q 041821 466 FK-EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE-------------------------------E----------V 503 (736)
Q Consensus 466 ~~-~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~-------------------------------~----------~ 503 (736)
|. +-|+.++-|.||+|++++|+.||||+....-... + .
T Consensus 128 F~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElD 207 (517)
T COG0661 128 FEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELD 207 (517)
T ss_pred cCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhC
Confidence 44 4689999999999999999999999985421110 0 1
Q ss_pred HHHHHHHHhcCC----CCceeeEEEEE-EeCCeEEEEEecCCCCCHhhhc--ccCCCCCHHH-----HHHHHHHHHHHhh
Q 041821 504 FWAEVSTIGKIY----HMNLVRMWGFC-SEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKE-----RFKVALGTAKGLA 571 (736)
Q Consensus 504 ~~~E~~~l~~l~----h~niv~l~~~~-~~~~~~~lv~e~~~~gsL~~~l--~~~~~l~~~~-----~~~i~~~i~~gL~ 571 (736)
+.+|+..+.+++ +..=+++-..+ .-.....|+|||++|-.+.+.. +. ..++.+. ...++.|+.+ -.
T Consensus 208 y~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f~~q~~~-dg 285 (517)
T COG0661 208 YRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAFLRQLLR-DG 285 (517)
T ss_pred HHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHHHHHHHh-cC
Confidence 334555554442 22223333333 3356678999999998888773 33 2344332 2334455555 56
Q ss_pred hhhcC----------CCccEEcccCcccccCCC
Q 041821 572 YLHHD----------EFEPKIADFGLAKLSQRG 594 (736)
Q Consensus 572 yLH~~----------~~~~kl~DFGla~~~~~~ 594 (736)
|.|.+ +.++-+.|||+...+...
T Consensus 286 ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 286 FFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred ccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 67754 457889999999766543
|
|
| >PRK10593 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.03 Score=58.69 Aligned_cols=104 Identities=12% Similarity=0.061 Sum_probs=76.7
Q ss_pred ccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCC---CceeeEEEEEEe---CCeEEEEEecCC
Q 041821 467 KEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH---MNLVRMWGFCSE---GRHRLLIYEYVE 540 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~---~~~~~lv~e~~~ 540 (736)
.+.||.|..+.||+....++ .+.+|..+. ......+..|...|+.|.- ..+.++++++.. .+..+||||+++
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~ 96 (297)
T PRK10593 19 VECISEQPYAALWALYDSQG-NPMPLMARS-FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLR 96 (297)
T ss_pred eeecCCccceeEEEEEcCCC-CEEEEEecc-cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccC
Confidence 45799999999999986555 466676432 2234578899999988853 367788888754 366899999999
Q ss_pred CCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC
Q 041821 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE 577 (736)
Q Consensus 541 ~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~ 577 (736)
+.++.+. ..+......+..+++++|+-||+.+
T Consensus 97 G~~~~~~-----~~~~~~~~~l~~~l~~~La~LH~~~ 128 (297)
T PRK10593 97 GVSVEAP-----ARTPERWEQLKDQIVEGLLAWHRID 128 (297)
T ss_pred CEecCCC-----CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 9888762 1334456677788999999999864
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.013 Score=56.54 Aligned_cols=110 Identities=21% Similarity=0.252 Sum_probs=63.2
Q ss_pred EEEEeeeCCCcEEEEEEeCccc--------------c-------------cHHHHHHHHHHHhcCCCC--ceeeEEEEEE
Q 041821 477 AVYKGVLADGRAVAVKRLGDLH--------------Q-------------GEEVFWAEVSTIGKIYHM--NLVRMWGFCS 527 (736)
Q Consensus 477 ~Vy~~~~~~~~~vavK~~~~~~--------------~-------------~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 527 (736)
.||.|...++..+|||..+... . ......+|++.|.++..- ++.+++++-
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899998899999999873210 0 012357899999999755 456666542
Q ss_pred eCCeEEEEEecCC--CCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhh-hcC---------------CCccEEcccCccc
Q 041821 528 EGRHRLLIYEYVE--KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL-HHD---------------EFEPKIADFGLAK 589 (736)
Q Consensus 528 ~~~~~~lv~e~~~--~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yL-H~~---------------~~~~kl~DFGla~ 589 (736)
.-.|||||++ +..+..+.... ++......++.+++..+..+ |.. +..+.|+|||.+.
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~~~~iIDf~qav 154 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDGKVYIIDFGQAV 154 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETTCEEE--GTTEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecceEEEEecCcce
Confidence 3369999998 55554433221 11334455556666644443 332 2278999999987
Q ss_pred ccC
Q 041821 590 LSQ 592 (736)
Q Consensus 590 ~~~ 592 (736)
...
T Consensus 155 ~~~ 157 (188)
T PF01163_consen 155 DSS 157 (188)
T ss_dssp ETT
T ss_pred ecC
Confidence 543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.063 Score=55.12 Aligned_cols=99 Identities=13% Similarity=-0.001 Sum_probs=68.0
Q ss_pred EEEEeeeCCCcEEEEEEeCcccc------------cHHHHHHHHHHHhcCCCCc--eeeEEEEEEe-----CCeEEEEEe
Q 041821 477 AVYKGVLADGRAVAVKRLGDLHQ------------GEEVFWAEVSTIGKIYHMN--LVRMWGFCSE-----GRHRLLIYE 537 (736)
Q Consensus 477 ~Vy~~~~~~~~~vavK~~~~~~~------------~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~-----~~~~~lv~e 537 (736)
.|.+..+ +|+.+.||+...... ....+.+|...+.++...+ ..+.+++... ....+||||
T Consensus 37 rvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 37 RTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred eEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 3566666 577899997743221 1123778999888884333 3444555543 234689999
Q ss_pred cCCCC-CHhhhccc--CCCCCHHHHHHHHHHHHHHhhhhhcC
Q 041821 538 YVEKQ-SLDKHLFS--SYFLGWKERFKVALGTAKGLAYLHHD 576 (736)
Q Consensus 538 ~~~~g-sL~~~l~~--~~~l~~~~~~~i~~~i~~gL~yLH~~ 576 (736)
++++. +|.+++.. ....+...+..++.+++..+.-||+.
T Consensus 116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~ 157 (268)
T PRK15123 116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA 157 (268)
T ss_pred eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99976 89888753 23456677889999999999999965
|
|
| >KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.0092 Score=64.61 Aligned_cols=163 Identities=20% Similarity=0.240 Sum_probs=88.4
Q ss_pred HHHHHHHHHHhcCCCCceeeEEEEEEeCC-eEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCCcc
Q 041821 502 EVFWAEVSTIGKIYHMNLVRMWGFCSEGR-HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEFEP 580 (736)
Q Consensus 502 ~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~ 580 (736)
.+++-..++++.+.|+|+...+++..... ...+|+|++ +.||.+.+..+. +--. ...+.+...+| ..
T Consensus 27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~-l~~~------s~~~~~~~~~~----~~ 94 (725)
T KOG1093|consen 27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGN-LKDE------SLLAHGVLHLN----II 94 (725)
T ss_pred HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhcc-cchh------hhcccccceeh----hh
Confidence 44566788899999999999998876543 357889998 588988876554 2111 11122222221 12
Q ss_pred EEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHH
Q 041821 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRF 660 (736)
Q Consensus 581 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~ 660 (736)
+++| -+ ... | | .+..+|+||||+|.++.|+..|...+.... ..+.
T Consensus 95 ~~td-~~---~t~---------------~--~-----~~~~pKsdVwsl~~i~~el~L~~~l~~~~~---------~s~~ 139 (725)
T KOG1093|consen 95 YITD-HF---LTK---------------Y--P-----SPIGPKSDVWSLGFIILELYLGISLEAELT---------ESEY 139 (725)
T ss_pred hccc-cc---ccc---------------C--C-----CCCCcchhhhhHHHHHHHHHHhhHHHHHHH---------HHHH
Confidence 3444 00 000 0 0 112249999999999999999965543111 0111
Q ss_pred HHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 041821 661 VREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDS 716 (736)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 716 (736)
...+..-...... ...+ .....+..+....++++..+|+-..|..||...+
T Consensus 140 l~~i~k~~~~d~~--~~~~---a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~ 190 (725)
T KOG1093|consen 140 LEILLKYYTDDQE--LLST---AMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPME 190 (725)
T ss_pred HHHHHHhccCchh--HHHH---HHHHHHHHhhhHhHHHHhccCCccccccccchhH
Confidence 1111100000000 0000 0000122344567788899999999998886443
|
|
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.033 Score=55.81 Aligned_cols=102 Identities=22% Similarity=0.259 Sum_probs=79.0
Q ss_pred cccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCC--ceeeEEEEEEe---CCeEEEEEecCCCC
Q 041821 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM--NLVRMWGFCSE---GRHRLLIYEYVEKQ 542 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~---~~~~~lv~e~~~~g 542 (736)
+.|+.|..+.||+....+ ..+++|..... .....+.+|..+++.+... .+.+++.+... ....+++|+++++.
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~ 80 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGR 80 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSE
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccc
Confidence 568899999999999876 69999998665 4556677898888887533 35566665433 34578999999998
Q ss_pred CHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC
Q 041821 543 SLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE 577 (736)
Q Consensus 543 sL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~ 577 (736)
.+.. ..+......++.++++.|.-||...
T Consensus 81 ~~~~------~~~~~~~~~~~~~~~~~l~~lh~~~ 109 (239)
T PF01636_consen 81 PLDD------ELSPEQRPELLRQLGRALAQLHQVP 109 (239)
T ss_dssp EHHH------TSTHHHHHHHHHHHHHHHHHHHHSH
T ss_pred cccc------cccccccccccccchhhhhhccccc
Confidence 8887 4678888999999999999999863
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.05 Score=52.74 Aligned_cols=77 Identities=23% Similarity=0.271 Sum_probs=56.7
Q ss_pred HHHHHHhcCCC-CceeeEEEEEEeCCeEEEEEecCCCCCHhhh---cccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-cc
Q 041821 506 AEVSTIGKIYH-MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKH---LFSSYFLGWKERFKVALGTAKGLAYLHHDEF-EP 580 (736)
Q Consensus 506 ~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~---l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-~~ 580 (736)
+|.-+|+.+++ +++.+++|+|-+ ++|.||...+++... +.+-...+|..+.+|+.++++.+.+|++... .+
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~ 83 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFF 83 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence 58888999976 699999999943 679999987766421 1122246899999999999999999987421 14
Q ss_pred EEcccC
Q 041821 581 KIADFG 586 (736)
Q Consensus 581 kl~DFG 586 (736)
.++|+.
T Consensus 84 ~lcDv~ 89 (188)
T PF12260_consen 84 YLCDVS 89 (188)
T ss_pred EEeecc
Confidence 444443
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.12 Score=51.91 Aligned_cols=101 Identities=18% Similarity=0.205 Sum_probs=73.8
Q ss_pred cccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCc--eeeEEEEEEeCCeEEEEEecCCCCC-H
Q 041821 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMN--LVRMWGFCSEGRHRLLIYEYVEKQS-L 544 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~gs-L 544 (736)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..-. +.+.+++..+.+...+|||+++|.. +
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF-DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 46899999999984 24567788876432 3345688999998886433 4677888888888889999999863 3
Q ss_pred hhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC
Q 041821 545 DKHLFSSYFLGWKERFKVALGTAKGLAYLHHD 576 (736)
Q Consensus 545 ~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~ 576 (736)
...+. .+......++.++++.+.-||+-
T Consensus 83 ~~~~~----~~~~~~~~l~~~la~~l~~lH~~ 110 (226)
T TIGR02172 83 SRIIS----DNPSRLEEIAKIFAEMAKKLHST 110 (226)
T ss_pred hhhhc----CCHHHHHHHHHHHHHHHHHHhCC
Confidence 33332 34556667889999999999974
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.12 Score=52.36 Aligned_cols=99 Identities=14% Similarity=0.030 Sum_probs=70.4
Q ss_pred cCeece-eEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEEEEecCCCCCHhhh
Q 041821 470 LGRGGS-GAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKH 547 (736)
Q Consensus 470 lG~G~f-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 547 (736)
|-.|.. ..||+.... +..+.||+..... ...+.+|+++++.+. +--+.+++++...++..++|||+++|.+|...
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence 334444 789999864 4678888875543 334667888888874 44466778877777778999999998888754
Q ss_pred cccCCCCCHHHHHHHHHHHHHHhhhhhcCC
Q 041821 548 LFSSYFLGWKERFKVALGTAKGLAYLHHDE 577 (736)
Q Consensus 548 l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~ 577 (736)
.. ......++.++++.|.-||+-.
T Consensus 83 ~~------~~~~~~~~~~l~~~l~~lH~i~ 106 (244)
T cd05150 83 WE------ELEPERLVDALAEALRRLHALP 106 (244)
T ss_pred hc------ccCHHHHHHHHHHHHHHHhcCC
Confidence 31 1234467889999999999754
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.13 Score=57.45 Aligned_cols=124 Identities=19% Similarity=0.165 Sum_probs=75.2
Q ss_pred cccCeeceeEEEEeeeCCCcEEEEEEeCcccccH--------------------------------H------HHHHHHH
Q 041821 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE--------------------------------E------VFWAEVS 509 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------------~------~~~~E~~ 509 (736)
+.||.-+.|.||+|++++|+.||||+-+..-+.. + .|.+|++
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 4699999999999999999999999975421111 0 1344554
Q ss_pred HHhcC----CCCce---eeEEEEEE-eCCeEEEEEecCCCCCHhhhc--ccCCCCCHHHHHHH-----HHHHHHHhhhhh
Q 041821 510 TIGKI----YHMNL---VRMWGFCS-EGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKERFKV-----ALGTAKGLAYLH 574 (736)
Q Consensus 510 ~l~~l----~h~ni---v~l~~~~~-~~~~~~lv~e~~~~gsL~~~l--~~~~~l~~~~~~~i-----~~~i~~gL~yLH 574 (736)
-..++ .|-++ |++-.++. -.....|+||||+|..+.+.. .+. .++...+..- +.||..- .++|
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~-gi~~~~i~~~l~~~~~~qIf~~-GffH 324 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKR-GISPHDILNKLVEAYLEQIFKT-GFFH 324 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHc-CCCHHHHHHHHHHHHHHHHHhc-CCcc
Confidence 33332 35551 22323332 245678999999998776653 333 3555544332 3333332 2667
Q ss_pred cC--------------CCccEEcccCcccccCC
Q 041821 575 HD--------------EFEPKIADFGLAKLSQR 593 (736)
Q Consensus 575 ~~--------------~~~~kl~DFGla~~~~~ 593 (736)
.+ +..+.+-|||+...+..
T Consensus 325 aDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 325 ADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred CCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 43 45778999999876543
|
|
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.32 Score=48.54 Aligned_cols=119 Identities=21% Similarity=0.221 Sum_probs=69.8
Q ss_pred ccCeeceeEEEEeeeCCCcEEEEEEeCcccccH----------HH---------------HHHHHHHHhcCC--CCceee
Q 041821 469 ELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE----------EV---------------FWAEVSTIGKIY--HMNLVR 521 (736)
Q Consensus 469 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~----------~~---------------~~~E~~~l~~l~--h~niv~ 521 (736)
.|..|--+.||+|...++..+|||+.+...... .. ..+|+.-|.++. +-.+.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 577888889999998889999999985422111 01 245777777763 333344
Q ss_pred EEEEEEeCCeEEEEEecCCCCC-HhhhcccCCCCCHHHHHHHHHHHHHHh-------hhhhcC---------CCccEEcc
Q 041821 522 MWGFCSEGRHRLLIYEYVEKQS-LDKHLFSSYFLGWKERFKVALGTAKGL-------AYLHHD---------EFEPKIAD 584 (736)
Q Consensus 522 l~~~~~~~~~~~lv~e~~~~gs-L~~~l~~~~~l~~~~~~~i~~~i~~gL-------~yLH~~---------~~~~kl~D 584 (736)
-+++. .-.|||||+.... -.-.|+.- .+...++..+..++++.+ .+.|.+ +..|.|+|
T Consensus 135 Pi~~~----~nVLvMEfIg~~g~pAP~LkDv-~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~~~~p~iID 209 (268)
T COG1718 135 PIAFR----NNVLVMEFIGDDGLPAPRLKDV-PLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVHDGEPYIID 209 (268)
T ss_pred ceeec----CCeEEEEeccCCCCCCCCcccC-CcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEECCeEEEEE
Confidence 44432 2369999996541 11222222 222223444444444433 344543 55889999
Q ss_pred cCcccccC
Q 041821 585 FGLAKLSQ 592 (736)
Q Consensus 585 FGla~~~~ 592 (736)
||-|....
T Consensus 210 ~~QaV~~~ 217 (268)
T COG1718 210 VSQAVTID 217 (268)
T ss_pred CccccccC
Confidence 99987554
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.59 Score=45.82 Aligned_cols=106 Identities=18% Similarity=0.145 Sum_probs=75.6
Q ss_pred cCeeceeEEEEeeeCCCcEEEEEEeCc----c---cccHHHHHHHHHHHhcCCC--CceeeEEEEEEe---C--CeEEEE
Q 041821 470 LGRGGSGAVYKGVLADGRAVAVKRLGD----L---HQGEEVFWAEVSTIGKIYH--MNLVRMWGFCSE---G--RHRLLI 535 (736)
Q Consensus 470 lG~G~fg~Vy~~~~~~~~~vavK~~~~----~---~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~---~--~~~~lv 535 (736)
-|+||-+-|++-.+. |+.+=+|+... + ..+...|.+|+..|.++.. -.+.+.. ++.. + -..+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 467899999998774 45688888752 1 2356789999999999853 2244444 3321 1 235799
Q ss_pred EecCCC-CCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC
Q 041821 536 YEYVEK-QSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE 577 (736)
Q Consensus 536 ~e~~~~-gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~ 577 (736)
+|-+++ -+|.+++.... +.+...+..++.++++.|.-||+.+
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G 148 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN 148 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC
Confidence 997764 58888886532 5678888899999999999999764
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.4 Score=48.40 Aligned_cols=121 Identities=18% Similarity=0.204 Sum_probs=76.2
Q ss_pred hhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc-----------------------ccHHHHHHHHHHHhcCCCC--c
Q 041821 464 KSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH-----------------------QGEEVFWAEVSTIGKIYHM--N 518 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-----------------------~~~~~~~~E~~~l~~l~h~--n 518 (736)
+.+..+||.|--+.||.|..+.|.++|||.-+... .......+|.++|.+|.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 45678999999999999999999999999642100 0112356799999998644 5
Q ss_pred eeeEEEEEEeCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHH-HHHHHHHH--hhhhhcC----------CCccEEccc
Q 041821 519 LVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFK-VALGTAKG--LAYLHHD----------EFEPKIADF 585 (736)
Q Consensus 519 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~-i~~~i~~g--L~yLH~~----------~~~~kl~DF 585 (736)
+.+.+++ +.-.+||||+++-.|...-. ..-..+.++. |+..+..+ ..|.|-+ +..+.++||
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~--~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~vIDw 246 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLRL--DVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVVIDW 246 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecccC--cccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEEEEeC
Confidence 5555543 34479999999866664321 1223333333 33333333 3456633 557788888
Q ss_pred Ccccc
Q 041821 586 GLAKL 590 (736)
Q Consensus 586 Gla~~ 590 (736)
--+..
T Consensus 247 PQ~v~ 251 (304)
T COG0478 247 PQAVP 251 (304)
T ss_pred ccccc
Confidence 66543
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=92.41 E-value=1 Score=44.41 Aligned_cols=89 Identities=15% Similarity=0.081 Sum_probs=65.8
Q ss_pred HHHHHHHHHHhcCC--CCceeeEEEEEEeCC----eEEEEEecCCCC-CHhhhcccCCCCCHHHHHHHHHHHHHHhhhhh
Q 041821 502 EVFWAEVSTIGKIY--HMNLVRMWGFCSEGR----HRLLIYEYVEKQ-SLDKHLFSSYFLGWKERFKVALGTAKGLAYLH 574 (736)
Q Consensus 502 ~~~~~E~~~l~~l~--h~niv~l~~~~~~~~----~~~lv~e~~~~g-sL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH 574 (736)
....+|...+.++. .-.+.+.+++..... ..+||+|++++. +|.+++.....++......++.++++.+.-||
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH 135 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH 135 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence 45678888887775 333455666665522 458999999974 89999876545777788899999999999999
Q ss_pred cCCC-------------------ccEEcccCcccc
Q 041821 575 HDEF-------------------EPKIADFGLAKL 590 (736)
Q Consensus 575 ~~~~-------------------~~kl~DFGla~~ 590 (736)
+.++ .+.|+||+-++.
T Consensus 136 ~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 136 DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 7633 467888887764
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >smart00223 APPLE APPLE domain | Back alignment and domain information |
|---|
Probab=91.80 E-value=0.23 Score=40.45 Aligned_cols=49 Identities=33% Similarity=0.558 Sum_probs=38.1
Q ss_pred eCCcCccCccccccCCCCHHHHHHHhhcCCCceeEEeccCCCc---ceeeeee
Q 041821 295 VPNTDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQG---LCFTKSV 344 (736)
Q Consensus 295 ~~~~~~~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~g~~---~C~~~~~ 344 (736)
.+|+++++.+.......+.++|++.|..+=.|.||.|. .... .|++|..
T Consensus 6 ~~~~df~G~Dl~~~~~~~~~~Cq~~Ct~~~~C~~FTf~-~~~~~~~~C~LK~s 57 (79)
T smart00223 6 YKNVDFRGSDINTVYVPSAQVCQKRCTSHPRCLFFTFS-TNEPPEEKCLLKDS 57 (79)
T ss_pred ccCccccCceeeeeecCCHHHHHHhhcCCCCccEEEee-CCCCCCCEeEeCcC
Confidence 35677777777666678899999999999999999996 3333 6877654
|
Four-fold repeat in plasma kallikrein and coagulation factor XI. Factor XI apple 3 mediates binding to platelets. Factor XI apple 1 binds high-molecular-mass kininogen. Apple 4 in factor XI mediates dimer formation and binds to factor XIIa. Mutations in apple 4 cause factor XI deficiency, an inherited bleeding disorder. |
| >KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=91.55 E-value=0.038 Score=67.21 Aligned_cols=139 Identities=12% Similarity=0.011 Sum_probs=96.2
Q ss_pred HHHHHHHHHhcCCCCceeeEEEEEEe--CCeEEEEEecCCCCCHhhhcccCC----CCCHHHHHHHHHHHHHHhhhhhcC
Q 041821 503 VFWAEVSTIGKIYHMNLVRMWGFCSE--GRHRLLIYEYVEKQSLDKHLFSSY----FLGWKERFKVALGTAKGLAYLHHD 576 (736)
Q Consensus 503 ~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~----~l~~~~~~~i~~~i~~gL~yLH~~ 576 (736)
....|...++...|+++.....-... ..+.+.+++|+..|.+...|-+.. +++..-......+...+..-.|+.
T Consensus 1275 mll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~ 1354 (2724)
T KOG1826|consen 1275 MLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSL 1354 (2724)
T ss_pred hhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhc
Confidence 34556666777789998876654433 345689999999999999886532 333333333333335555555532
Q ss_pred ---------------------CCccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHH
Q 041821 577 ---------------------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILE 635 (736)
Q Consensus 577 ---------------------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~e 635 (736)
+..+|+.++|+.+...+.. .......+++.|++|++.....++.++|+|..|+.+|+
T Consensus 1355 tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~--sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~ 1432 (2724)
T KOG1826|consen 1355 TNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVL--SFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYL 1432 (2724)
T ss_pred ccCCccchhhhhhhhccceecCCcccccccccccccCchH--hhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 4478999999998433221 12445667889999999998889999999999999999
Q ss_pred HHhCCCCC
Q 041821 636 MVKGIRLS 643 (736)
Q Consensus 636 l~tg~~p~ 643 (736)
..-|..+|
T Consensus 1433 rs~~n~~f 1440 (2724)
T KOG1826|consen 1433 RSDGNAYF 1440 (2724)
T ss_pred HhcccHHH
Confidence 98886554
|
|
| >PF14295 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A | Back alignment and domain information |
|---|
Probab=91.11 E-value=0.19 Score=36.81 Aligned_cols=34 Identities=29% Similarity=0.703 Sum_probs=17.8
Q ss_pred CCCCHHHHHHHhhcCCCceeEEeccC----CCcceeee
Q 041821 309 QTVSKEACMKLCLDDCRCSGFSYRLT----GQGLCFTK 342 (736)
Q Consensus 309 ~~~s~~~C~~~Cl~nCsC~Ayay~~~----g~~~C~~~ 342 (736)
...+.++|...|..+=.|.+|.|... +.+.|++|
T Consensus 14 ~~~s~~~C~~~C~~~~~C~~~~~~~~~~~~~~~~C~LK 51 (51)
T PF14295_consen 14 TASSPEECQAACAADPGCQAFTFNPPGCPSSSGRCYLK 51 (51)
T ss_dssp ----HHHHHHHHHTSTT--EEEEETTEE----------
T ss_pred cCCCHHHHHHHccCCCCCCEEEEECCCcccccccccCC
Confidence 45689999999999999999999731 34567654
|
|
| >PRK09550 mtnK methylthioribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=90.77 E-value=2 Score=46.73 Aligned_cols=98 Identities=15% Similarity=0.129 Sum_probs=63.4
Q ss_pred cccCeeceeEEEEeeeCCC-cEEEEEEeCcc--------cccHHHHHHHHHHHhcCC---CCceeeEEEEEEeCCeEEEE
Q 041821 468 EELGRGGSGAVYKGVLADG-RAVAVKRLGDL--------HQGEEVFWAEVSTIGKIY---HMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv 535 (736)
+.||.|.+..||++...+| +.++||.-... ....+....|.+.|..+. -.++.+++.+ +.+..++|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence 4799999999999998776 58999985311 123455677888888763 3456777766 44567899
Q ss_pred EecCCCCC-HhhhcccCCCCCHHHHHHHHHHHHH
Q 041821 536 YEYVEKQS-LDKHLFSSYFLGWKERFKVALGTAK 568 (736)
Q Consensus 536 ~e~~~~gs-L~~~l~~~~~l~~~~~~~i~~~i~~ 568 (736)
|||+++.. +.+.|...... ...+.+|..-+++
T Consensus 110 ME~L~~~~~lr~~Ll~g~~~-p~~a~~iG~~LA~ 142 (401)
T PRK09550 110 MEDLSDHKILRKGLIDGKKY-PKLAEHIGEFLAR 142 (401)
T ss_pred EecCCCccHHHHHHhcCCcc-HHHHHHHHHHHHH
Confidence 99998754 54555443322 2333344444444
|
|
| >cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes | Back alignment and domain information |
|---|
Probab=90.72 E-value=0.77 Score=46.12 Aligned_cols=99 Identities=18% Similarity=0.130 Sum_probs=63.5
Q ss_pred cccCeeceeEEEEeeeCC--CcEEEEEEeCcccccHHHHHHHHHHHhcCCCCc-eeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 468 EELGRGGSGAVYKGVLAD--GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMN-LVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
+.|..|-...+|+....+ ++.+++|.............+|+.+++.+.... ..++++... -.++|||+++.++
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~l 79 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRTL 79 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCcC
Confidence 456777788999998664 678899977543222222347888888885333 344544432 1379999998665
Q ss_pred hhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC
Q 041821 545 DKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF 578 (736)
Q Consensus 545 ~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~ 578 (736)
..... ....++.++++.|.-||....
T Consensus 80 ~~~~~--------~~~~~~~~la~~l~~lH~~~~ 105 (235)
T cd05157 80 EPEDL--------RNPKIYRLIARELAKLHSIKP 105 (235)
T ss_pred CHHHc--------cChHHHHHHHHHHHHHhcccc
Confidence 43211 113467789999999997653
|
ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo |
| >PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] | Back alignment and domain information |
|---|
Probab=90.28 E-value=0.24 Score=39.99 Aligned_cols=51 Identities=29% Similarity=0.676 Sum_probs=36.7
Q ss_pred EEeeCCcCccCccccccCCCCHHHHHHHhhcCCC-ceeEEeccCCCcceeeee
Q 041821 292 FVGVPNTDFYGFDLNYSQTVSKEACMKLCLDDCR-CSGFSYRLTGQGLCFTKS 343 (736)
Q Consensus 292 f~~~~~~~~~~~~~~~~~~~s~~~C~~~Cl~nCs-C~Ayay~~~g~~~C~~~~ 343 (736)
|.++++..+...........++++|...|+.+=. |.++.|. ...+.|.++.
T Consensus 4 f~~~~~~~l~~~~~~~~~v~s~~~C~~~C~~~~~~C~s~~y~-~~~~~C~L~~ 55 (79)
T PF00024_consen 4 FERIPGYRLSGHSIKEINVPSLEECAQLCLNEPRRCKSFNYD-PSSKTCYLSS 55 (79)
T ss_dssp EEEEEEEEEESCEEEEEEESSHHHHHHHHHHSTT-ESEEEEE-TTTTEEEEEC
T ss_pred eEEECCEEEeCCcceEEcCCCHHHHHhhcCcCcccCCeEEEE-CCCCEEEEcC
Confidence 5555555555433322344589999999999999 9999997 5567898753
|
These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs It has been shown that, the N-terminal N domains of members of the plasminogen/hepatocyte growth factor family, the apple domains of the plasma prekallikrein/coagulation factor XI family, and domains of various nematode proteins belong to the same module superfamily, the PAN module []. PAN contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge that links the N and C termini of the domain.; PDB: 1GP9_C 2QJ2_B 1GMO_H 1NK1_B 3MKP_B 1BHT_B 3HN4_A 1GMN_A 3HMS_A 3HMT_B .... |
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=89.76 E-value=3 Score=41.15 Aligned_cols=125 Identities=14% Similarity=0.145 Sum_probs=71.4
Q ss_pred HHHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccccc-HHH---------HHHHHHHHhcCC---CCceeeEE
Q 041821 457 AELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQG-EEV---------FWAEVSTIGKIY---HMNLVRMW 523 (736)
Q Consensus 457 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~-~~~---------~~~E~~~l~~l~---h~niv~l~ 523 (736)
.++....+...+.+-......|.+-.. +++.+++|........ ++. ..+++..+.+++ -..+..++
T Consensus 26 ~~i~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~y 104 (229)
T PF06176_consen 26 EKILDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPY 104 (229)
T ss_pred HHHHhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccce
Confidence 345566667777777666677777666 5788899987543221 111 223444344442 22333333
Q ss_pred EEEEe-----CCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC---------------ccEEc
Q 041821 524 GFCSE-----GRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF---------------EPKIA 583 (736)
Q Consensus 524 ~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------~~kl~ 583 (736)
-+.+. ....+|+|||++|..|.+... ++. .++..++++|.-||..++ .+++.
T Consensus 105 l~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~i~iI 176 (229)
T PF06176_consen 105 LAAEKKIFRYTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNGIRII 176 (229)
T ss_pred eeeeeeeccceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCcEEEE
Confidence 32222 234568999999988876532 222 233455666777775532 57888
Q ss_pred ccCcccc
Q 041821 584 DFGLAKL 590 (736)
Q Consensus 584 DFGla~~ 590 (736)
||+..+.
T Consensus 177 D~~~k~~ 183 (229)
T PF06176_consen 177 DTQGKRM 183 (229)
T ss_pred ECccccc
Confidence 8877653
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP | Back alignment and domain information |
|---|
Probab=89.40 E-value=3 Score=40.65 Aligned_cols=99 Identities=16% Similarity=0.173 Sum_probs=67.9
Q ss_pred cccCeeceeEEEEeeeCCCcEEEEEEeCccc-----------------ccHHHHHHHHHHHhcCC------CCceeeEEE
Q 041821 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLH-----------------QGEEVFWAEVSTIGKIY------HMNLVRMWG 524 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-----------------~~~~~~~~E~~~l~~l~------h~niv~l~~ 524 (736)
..||+|+.-.||.- ++.....||++.... ...++..+|+.-...+. +.+|.+++|
T Consensus 7 ~~i~~G~~R~cy~H--P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G 84 (199)
T PF10707_consen 7 DLIAQGGERDCYQH--PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG 84 (199)
T ss_pred cccccCCCceEEEC--CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence 47999999999864 445667888886544 12345666766555544 889999999
Q ss_pred EEEeCCeEEEEEecCCC------CCHhhhcccCCCCCHHHHHHHHHHHHHHh
Q 041821 525 FCSEGRHRLLIYEYVEK------QSLDKHLFSSYFLGWKERFKVALGTAKGL 570 (736)
Q Consensus 525 ~~~~~~~~~lv~e~~~~------gsL~~~l~~~~~l~~~~~~~i~~~i~~gL 570 (736)
+.+.+.-.-+|+|.+.+ .+|.+++.+.. ++. ...+.+.+..+-|
T Consensus 85 ~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~-~~~-~~~~~L~~f~~~l 134 (199)
T PF10707_consen 85 FVETNLGLGLVVELIRDADGNISPTLEDYLKEGG-LTE-ELRQALDEFKRYL 134 (199)
T ss_pred EEecCCceEEEEEEEECCCCCcCccHHHHHHcCC-ccH-HHHHHHHHHHHHH
Confidence 99999999999998753 36778885543 555 4444444444433
|
PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. |
| >PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli [] | Back alignment and domain information |
|---|
Probab=88.15 E-value=0.2 Score=44.50 Aligned_cols=43 Identities=30% Similarity=0.275 Sum_probs=32.1
Q ss_pred cccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHh
Q 041821 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIG 512 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~ 512 (736)
+-||.|+.|.||+|++++|+.||||+....- .+.+..++.+|+
T Consensus 17 ~PlasASiaQVh~a~l~~g~~VaVKV~rP~i--~~~i~~Dl~~l~ 59 (119)
T PF03109_consen 17 EPLASASIAQVHRARLKDGEEVAVKVQRPGI--EEQIEADLRILR 59 (119)
T ss_pred chhhheehhhheeeeecccchhhhhhcchHH--HHHHHHHHHHHH
Confidence 3699999999999999999999999986532 233444444444
|
These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins. |
| >cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members | Back alignment and domain information |
|---|
Probab=86.84 E-value=1.4 Score=44.34 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=63.4
Q ss_pred cccCeecee-EEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCC---ceeeEEEEEEeC---CeEEEEEecCC
Q 041821 468 EELGRGGSG-AVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM---NLVRMWGFCSEG---RHRLLIYEYVE 540 (736)
Q Consensus 468 ~~lG~G~fg-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~---~~~~lv~e~~~ 540 (736)
+.|+.|+.. .||+. +..+++|.... ......+.+|+++|..+... .+.++++..... ...+++||+++
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~ 77 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE 77 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence 456767666 58875 23567776544 33345788899999877532 233444433332 23588999999
Q ss_pred CCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC
Q 041821 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF 578 (736)
Q Consensus 541 ~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~ 578 (736)
|.++.+... . ....++.++++.|.-||+-..
T Consensus 78 G~~l~~~~~-----~--~~~~l~~~la~~l~~LH~i~~ 108 (235)
T cd05155 78 GETATAAAL-----S--DPSEFAEDLADFLAALRQIDP 108 (235)
T ss_pred CCCCCcccc-----C--CHHHHHHHHHHHHHHHhCCCc
Confidence 988865421 1 233678899999999997543
|
The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=83.14 E-value=0.24 Score=54.09 Aligned_cols=66 Identities=26% Similarity=0.293 Sum_probs=52.2
Q ss_pred hhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCc--ccccHHHHHHHHHHHhcCCCCceeeEEEEEEe
Q 041821 463 TKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGD--LHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE 528 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 528 (736)
.++....+|.|+||+|+.+.... +..+|||+|.. ......+..+|+..+.++.|++++++...+..
T Consensus 50 ~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~ 118 (516)
T KOG1033|consen 50 DFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYE 118 (516)
T ss_pred cccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceec
Confidence 44566789999999999998544 55899999853 33445667889999999999999998877654
|
|
| >PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein [] | Back alignment and domain information |
|---|
Probab=82.74 E-value=2.5 Score=43.87 Aligned_cols=92 Identities=20% Similarity=0.231 Sum_probs=57.3
Q ss_pred ccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCC---CCceeeEEEEEEeCCeEEEEEecCCCCC
Q 041821 467 KEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY---HMNLVRMWGFCSEGRHRLLIYEYVEKQS 543 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~gs 543 (736)
.+.|+-|....+|+.. .+++.+.||.-. ......|..|..-|+.|. --.+.+++++....+..+|||||++.+.
T Consensus 22 ~~~v~GG~i~~a~~~~-~~~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~~ 98 (288)
T PF03881_consen 22 IEPVSGGDINEAYRLD-TDGGSYFVKVNS--ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMGS 98 (288)
T ss_dssp EEEE--SSSSEEEEEE-TTS-EEEEEEEE--GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE------
T ss_pred eEecCCCChhheEEEE-CCCccEEEEecC--hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCCC
Confidence 3468888899999988 467889999875 333455778888888773 4457788888887777899999997541
Q ss_pred HhhhcccCCCCCHHHHHHHHHHHHHHhhhhhc
Q 041821 544 LDKHLFSSYFLGWKERFKVALGTAKGLAYLHH 575 (736)
Q Consensus 544 L~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~ 575 (736)
. ..- -...+.+.|+-||.
T Consensus 99 ~-------~~~-------~~~~lg~~LA~LH~ 116 (288)
T PF03881_consen 99 P-------SPP-------DWEELGRQLAALHQ 116 (288)
T ss_dssp ---------CC-------HHHHHHHHHHHHHH
T ss_pred C-------Cch-------hHHHHHHHHHHHhh
Confidence 1 111 12456777888998
|
Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A. |
| >PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins | Back alignment and domain information |
|---|
Probab=82.18 E-value=0.45 Score=33.39 Aligned_cols=32 Identities=44% Similarity=0.848 Sum_probs=24.9
Q ss_pred CCCCCC-CCCCCCcccccCCC-CcCCCCCCCCcC
Q 041821 235 QPGKVH-GVCGKNGICVYTPE-PKCSCPPGYEAT 266 (736)
Q Consensus 235 ~~Cd~~-~~CG~~g~C~~~~~-~~C~C~~GF~~~ 266 (736)
|.|... ..|.+++.|..+.. -.|.|++||+..
T Consensus 3 dEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~ 36 (42)
T PF07645_consen 3 DECAEGPHNCPENGTCVNTEGSYSCSCPPGYELN 36 (42)
T ss_dssp STTTTTSSSSSTTSEEEEETTEEEEEESTTEEEC
T ss_pred cccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEEC
Confidence 677775 58999999977654 459999999843
|
Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A .... |
| >PLN02756 S-methyl-5-thioribose kinase | Back alignment and domain information |
|---|
Probab=81.46 E-value=8.8 Score=41.81 Aligned_cols=102 Identities=19% Similarity=0.113 Sum_probs=66.7
Q ss_pred ccccCeeceeEEEEeeeCCCcEEEEEEeCc-----cc---ccHHHHHHHHHHHhcCC---CCceeeEEEEEEeCCeEEEE
Q 041821 467 KEELGRGGSGAVYKGVLADGRAVAVKRLGD-----LH---QGEEVFWAEVSTIGKIY---HMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~-----~~---~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv 535 (736)
.+.||.|....||+.... +..++||+-.. .. ....+-..|...|+.+. ..++.+++.++. +..+++
T Consensus 37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlv 113 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIG 113 (418)
T ss_pred EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEE
Confidence 457899999999998864 55799998641 11 12233345666666553 357788888877 446788
Q ss_pred EecCCC--CCHhhhcccCCCCCHHHHHHHHHHHHHHhhh
Q 041821 536 YEYVEK--QSLDKHLFSSYFLGWKERFKVALGTAKGLAY 572 (736)
Q Consensus 536 ~e~~~~--gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~y 572 (736)
||++++ ..+.+-+-... .....+..+...+++.|-|
T Consensus 114 ME~L~~~~~ilr~~Ll~G~-~~p~~a~~ig~~la~tLf~ 151 (418)
T PLN02756 114 MRYLEPPHIILRKGLIAGI-EYPLLAEHMSDYMAKTLFF 151 (418)
T ss_pred EeecCCcceehhhhhccCC-CCHHHHHHHHHHHHHHHhh
Confidence 999976 34655554433 2356667777777777654
|
|
| >cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes | Back alignment and domain information |
|---|
Probab=81.04 E-value=3.3 Score=43.40 Aligned_cols=99 Identities=21% Similarity=0.251 Sum_probs=63.8
Q ss_pred ccCeeceeEEEEeeeCC-------CcEEEEEEeCcccccHHHHHHHHHHHhcCCCCce-eeEEEEEEeCCeEEEEEecCC
Q 041821 469 ELGRGGSGAVYKGVLAD-------GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNL-VRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 469 ~lG~G~fg~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~ 540 (736)
.|..|--..+|+....+ ++.+++|+............+|.+++..+....+ .++++++.. .+|+||++
T Consensus 5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~i~ 80 (302)
T cd05156 5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEFIP 80 (302)
T ss_pred EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCC----CchhheeC
Confidence 45556666889888654 5789999976543333445678888888753333 345555532 35899998
Q ss_pred CCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCCc
Q 041821 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEFE 579 (736)
Q Consensus 541 ~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~ 579 (736)
|..+...... ...++.++++.|.-||+....
T Consensus 81 G~~l~~~~~~--------~~~~~~~ia~~L~~lH~~~~~ 111 (302)
T cd05156 81 SRTLTTEELR--------DPDISAEIARRMAKLHSIVVP 111 (302)
T ss_pred CCcCCHhHcC--------CcHHHHHHHHHHHHhhCCCCC
Confidence 8766542111 124677899999999987543
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 736 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 1e-38 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 5e-38 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 4e-29 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 4e-29 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-28 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 4e-28 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 6e-28 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 4e-26 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 2e-15 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 9e-15 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 3e-14 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 3e-14 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 1e-13 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 1e-13 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 1e-13 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 1e-13 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 1e-13 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 1e-13 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 1e-13 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 4e-13 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 4e-13 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 4e-13 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 5e-13 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 1e-12 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 4e-11 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 7e-11 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 7e-11 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 7e-11 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 7e-11 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 8e-11 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 1e-10 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 1e-10 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 1e-10 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 1e-10 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 1e-10 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 1e-10 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 1e-10 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 1e-10 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 5e-10 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 5e-10 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 5e-10 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 5e-10 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 6e-10 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 6e-10 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 8e-10 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 8e-10 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 8e-10 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 1e-09 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 1e-09 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 1e-09 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 2e-09 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 2e-09 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 2e-09 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 2e-09 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 3e-09 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 3e-09 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 3e-09 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 3e-09 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 4e-09 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 4e-09 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 4e-09 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 4e-09 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 4e-09 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 5e-09 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 5e-09 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 5e-09 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 5e-09 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 5e-09 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 8e-09 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 8e-09 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 9e-09 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 1e-08 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 1e-08 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 1e-08 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-08 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 1e-08 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-08 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 1e-08 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 1e-08 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 1e-08 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 2e-08 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 2e-08 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-08 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 2e-08 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 2e-08 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 2e-08 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-08 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-08 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 3e-08 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 3e-08 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 3e-08 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-08 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 3e-08 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 3e-08 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 3e-08 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 4e-08 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 4e-08 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 4e-08 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 4e-08 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 4e-08 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 4e-08 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 5e-08 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 6e-08 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 6e-08 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 6e-08 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 7e-08 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 7e-08 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 7e-08 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 7e-08 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 8e-08 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 8e-08 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 8e-08 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 8e-08 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 8e-08 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 8e-08 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 9e-08 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 9e-08 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 9e-08 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 1e-07 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 1e-07 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 1e-07 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 1e-07 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 1e-07 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 1e-07 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 1e-07 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 1e-07 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 1e-07 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 1e-07 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 1e-07 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 1e-07 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 1e-07 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 1e-07 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-07 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-07 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 1e-07 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 1e-07 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 2e-07 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 2e-07 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 2e-07 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 2e-07 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 2e-07 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 2e-07 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 2e-07 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 2e-07 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 2e-07 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 2e-07 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 2e-07 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 2e-07 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 2e-07 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 2e-07 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 3e-07 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 3e-07 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 3e-07 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 3e-07 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 3e-07 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-07 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 3e-07 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 3e-07 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 3e-07 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 3e-07 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 3e-07 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 3e-07 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 4e-07 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 4e-07 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 4e-07 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 4e-07 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-07 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-07 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 5e-07 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 6e-07 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 6e-07 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 6e-07 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 6e-07 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 6e-07 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 7e-07 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 7e-07 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 7e-07 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 7e-07 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 7e-07 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 7e-07 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 7e-07 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 7e-07 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 8e-07 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 8e-07 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 8e-07 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 8e-07 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 8e-07 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 8e-07 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 8e-07 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 8e-07 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 9e-07 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 9e-07 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 9e-07 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 9e-07 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 9e-07 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 9e-07 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-06 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 1e-06 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 1e-06 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 1e-06 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 1e-06 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 1e-06 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 1e-06 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 1e-06 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-06 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 1e-06 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 1e-06 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 1e-06 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 1e-06 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 1e-06 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 1e-06 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 1e-06 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 1e-06 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 1e-06 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 1e-06 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 1e-06 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 1e-06 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 1e-06 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 1e-06 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 1e-06 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 1e-06 | ||
| 3kex_A | 325 | Crystal Structure Of The Catalytically Inactive Kin | 1e-06 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 2e-06 | ||
| 3lmg_A | 344 | Crystal Structure Of The Erbb3 Kinase Domain In Com | 2e-06 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 2e-06 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 2e-06 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 2e-06 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 2e-06 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 2e-06 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 2e-06 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 2e-06 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 2e-06 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 2e-06 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 2e-06 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 2e-06 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 3e-06 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 3e-06 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 4e-06 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 4e-06 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 4e-06 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 4e-06 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 4e-06 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 4e-06 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 4e-06 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 4e-06 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 4e-06 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 4e-06 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 4e-06 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 4e-06 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 5e-06 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 5e-06 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 5e-06 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 5e-06 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 5e-06 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 5e-06 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 5e-06 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 6e-06 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 6e-06 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 6e-06 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 6e-06 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 6e-06 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 7e-06 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 7e-06 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 7e-06 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 7e-06 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 7e-06 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 7e-06 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 8e-06 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 8e-06 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 8e-06 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 8e-06 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 8e-06 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 9e-06 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 9e-06 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 9e-06 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 9e-06 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 9e-06 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 9e-06 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 9e-06 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 9e-06 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 9e-06 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 9e-06 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 1e-05 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 1e-05 | ||
| 3my0_A | 305 | Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai | 1e-05 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 1e-05 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 1e-05 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 1e-05 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 1e-05 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-05 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 1e-05 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 1e-05 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-05 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 1e-05 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 2e-05 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 2e-05 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 2e-05 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 2e-05 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 2e-05 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 2e-05 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 2e-05 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 2e-05 | ||
| 3q4t_A | 322 | Crystal Structure Of Activin Receptor Type-Iia (Acv | 2e-05 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 2e-05 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 2e-05 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 2e-05 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 2e-05 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 3e-05 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 3e-05 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 3e-05 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 3e-05 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 3e-05 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 3e-05 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 3e-05 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 3e-05 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 3e-05 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 3e-05 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 3e-05 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 3e-05 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 4e-05 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 4e-05 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 4e-05 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 4e-05 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 4e-05 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 5e-05 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 5e-05 | ||
| 3h9r_A | 330 | Crystal Structure Of The Kinase Domain Of Type I Ac | 5e-05 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 5e-05 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 5e-05 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 5e-05 | ||
| 3mtf_A | 301 | Crystal Structure Of The Acvr1 Kinase In Complex Wi | 6e-05 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 6e-05 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 6e-05 | ||
| 2qlu_A | 314 | Crystal Structure Of Activin Receptor Type Ii Kinas | 6e-05 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 6e-05 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 7e-05 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 7e-05 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 7e-05 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 7e-05 | ||
| 4dym_A | 301 | Crystal Structure Of The Acvr1 Kinase Domain In Com | 7e-05 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 7e-05 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 8e-05 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 8e-05 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 8e-05 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 8e-05 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 8e-05 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 8e-05 | ||
| 3srv_A | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 9e-05 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 9e-05 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 9e-05 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 9e-05 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 9e-05 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 9e-05 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 1e-04 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 1e-04 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 1e-04 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 1e-04 | ||
| 3tub_A | 293 | Crystal Structure Of Syk Kinase Domain With 1-(5-(6 | 1e-04 | ||
| 3vf8_A | 299 | Crystal Structure Of Spleen Tyrosine Kinase Syk Cat | 1e-04 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 1e-04 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 1e-04 | ||
| 3srv_B | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 1e-04 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 1e-04 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 1e-04 | ||
| 4f4p_A | 273 | Syk In Complex With Ligand Lasw836 Length = 273 | 1e-04 | ||
| 3emg_A | 291 | Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami | 1e-04 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 1e-04 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 1e-04 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 1e-04 | ||
| 4dfl_A | 274 | Crystal Structure Of Spleen Tyrosine Kinase Complex | 1e-04 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 1e-04 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 1e-04 | ||
| 1xba_A | 291 | Crystal Structure Of Apo Syk Tyrosine Kinase Domain | 2e-04 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 2e-04 | ||
| 1b6c_B | 342 | Crystal Structure Of The Cytoplasmic Domain Of The | 2e-04 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-04 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 2e-04 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 2e-04 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 2e-04 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 2e-04 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 2e-04 | ||
| 1py5_A | 326 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 2e-04 | ||
| 1rw8_A | 301 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 2e-04 | ||
| 1vjy_A | 303 | Crystal Structure Of A Naphthyridine Inhibitor Of H | 2e-04 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 2e-04 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 2e-04 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 2e-04 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 2e-04 | ||
| 3tzm_A | 309 | Tgf-Beta Receptor Type 1 In Complex With Sb431542 L | 2e-04 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-04 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 2e-04 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 2e-04 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 2e-04 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 2e-04 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 2e-04 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 3e-04 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 3e-04 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 3e-04 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 3e-04 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 3e-04 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 3e-04 | ||
| 4fl3_A | 635 | Structural And Biophysical Characterization Of The | 3e-04 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 3e-04 | ||
| 2wot_A | 306 | Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl) | 3e-04 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 3e-04 | ||
| 4fl2_A | 636 | Structural And Biophysical Characterization Of The | 3e-04 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 3e-04 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 3e-04 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 3e-04 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 3e-04 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 3e-04 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 3e-04 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 3e-04 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 3e-04 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 3e-04 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 4e-04 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 4e-04 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 4e-04 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 4e-04 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 4e-04 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 4e-04 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 4e-04 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 4e-04 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 4e-04 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 4e-04 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 4e-04 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 4e-04 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 4e-04 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 4e-04 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 4e-04 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 4e-04 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 4e-04 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 4e-04 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 4e-04 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 4e-04 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 4e-04 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 4e-04 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 4e-04 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 4e-04 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 4e-04 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 4e-04 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 5e-04 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 5e-04 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 5e-04 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 5e-04 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 5e-04 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 5e-04 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 5e-04 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 5e-04 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 5e-04 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 5e-04 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 5e-04 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 5e-04 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 6e-04 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 6e-04 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 6e-04 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 6e-04 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 7e-04 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 7e-04 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 7e-04 | ||
| 1xkk_A | 352 | Egfr Kinase Domain Complexed With A Quinazoline Inh | 7e-04 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 7e-04 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 7e-04 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 7e-04 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 7e-04 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 8e-04 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 8e-04 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 8e-04 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 8e-04 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 8e-04 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 8e-04 | ||
| 3bel_A | 315 | X-Ray Structure Of Egfr In Complex With Oxime Inhib | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293 | Back alignment and structure |
|
| >pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273 | Back alignment and structure |
|
| >pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 309 bits (793), Expect = 1e-99
Identities = 115/322 (35%), Positives = 168/322 (52%), Gaps = 38/322 (11%)
Query: 435 DVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEE--LGRGGSGAVYKGVLADGRAVAVK 492
DVP+ EE + Q +RFS EL+ ++ +F + LGRGG G VYKG LADG VAVK
Sbjct: 3 DVPA--EEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVK 60
Query: 493 RL-GDLHQGEEV-FWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF- 549
RL + QG E+ F EV I H NL+R+ GFC RLL+Y Y+ S+ L
Sbjct: 61 RLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 120
Query: 550 ---SSYFLGWKERFKVALGTAKGLAYLHHD-------------------EFEPKIADFGL 587
S L W +R ++ALG+A+GLAYLH EFE + DFGL
Sbjct: 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180
Query: 588 AKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVV 647
AKL ++ + +RGT G++APE+ S + K DV+ YGV++LE++ G R +
Sbjct: 181 AKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 239
Query: 648 EDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDED 707
+ + L +V+ L +E+ +E +VD L+G + + LI + + C
Sbjct: 240 LAND-DDVMLLDWVKG-----LLKEKK-LEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 292
Query: 708 RSKRPTMDSVVQSLLECETESE 729
+RP M VV+ +LE + +E
Sbjct: 293 PMERPKMSEVVR-MLEGDGLAE 313
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 294 bits (756), Expect = 2e-94
Identities = 95/313 (30%), Positives = 150/313 (47%), Gaps = 45/313 (14%)
Query: 441 EEGYQALSSQFRRFSYAELKKSTKSFKEE--------LGRGGSGAVYKGVLADGRAVAVK 492
+ + ++F FS+ ELK T +F E +G GG G VYKG + + VAVK
Sbjct: 2 NKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVK 60
Query: 493 RLGDL-----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKH 547
+L + + ++ F E+ + K H NLV + GF S+G L+Y Y+ SL
Sbjct: 61 KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR 120
Query: 548 LF---SSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLA 588
L + L W R K+A G A G+ +LH + F KI+DFGLA
Sbjct: 121 LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 589 KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVE 648
+ S++ + + S+I GT YMAPE IT K D+YS+GVV+LE++ G+ V+
Sbjct: 181 RASEKFAQTVMTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLP----AVD 235
Query: 649 DGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDR 708
+ + L E + +EE IE+ +D ++ ++ + + C+ E +
Sbjct: 236 EHREPQL-LLDIKEE-----IEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKK 288
Query: 709 SKRPTMDSVVQSL 721
+KRP + V Q L
Sbjct: 289 NKRPDIKKVQQLL 301
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 283 bits (727), Expect = 5e-90
Identities = 89/316 (28%), Positives = 143/316 (45%), Gaps = 32/316 (10%)
Query: 432 RRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEE--LGRGGSGAVYKGVLADGRAV 489
+ + + + + R +L+++T +F + +G G G VYKGVL DG V
Sbjct: 7 KATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV 66
Query: 490 AVKRL-GDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL 548
A+KR + QG E F E+ T+ H +LV + GFC E +LIY+Y+E +L +HL
Sbjct: 67 ALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL 126
Query: 549 F----SSYFLGWKERFKVALGTAKGLAYLH-----H-----------DEFEPKIADFGLA 588
+ + + W++R ++ +G A+GL YLH H + F PKI DFG++
Sbjct: 127 YGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS 186
Query: 589 KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVE 648
K + + ++GT GY+ PE+ +T K DVYS+GVV+ E++ +
Sbjct: 187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP 246
Query: 649 DGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDR 708
AE + +E+IVDP L K + C+
Sbjct: 247 REMVNLAEWAVESHN-NGQ--------LEQIVDPNLADKIRPESLRKFGDTAVKCLALSS 297
Query: 709 SKRPTMDSVVQSLLEC 724
RP+M V+ L
Sbjct: 298 EDRPSMGDVLWKLEYA 313
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 197 bits (503), Expect = 1e-57
Identities = 71/317 (22%), Positives = 115/317 (36%), Gaps = 48/317 (15%)
Query: 454 FSYAELKKSTKSFK--EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTI 511
L + + E RG G V+K L VAVK + EV ++
Sbjct: 14 LGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQNEYEVYSL 72
Query: 512 GKIYHMNLVRMWGFCSEGRH----RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
+ H N+++ G G LI + EK SL L + + W E +A A
Sbjct: 73 PGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL-KANVVSWNELCHIAETMA 131
Query: 568 KGLAYLHHD--------------------------EFEPKIADFGLAKLSQRGSNSSQFS 601
+GLAYLH D IADFGLA + G ++
Sbjct: 132 RGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTH 191
Query: 602 QIRGTKGYMAPEWAS-----NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAE 656
GT+ YMAPE ++D+Y+ G+V+ E+ ++ V++
Sbjct: 192 GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLP--- 248
Query: 657 LKRFVREVKRKILYEE--EAWIEEIVDPRLKGKFNTNQA-ATLIGIGISCVDEDRSKRPT 713
F E+ + E+ E + + P L+ + + A L C D D R +
Sbjct: 249 ---FEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLS 305
Query: 714 MDSVVQSLLECETESEI 730
V + + + + + I
Sbjct: 306 AGCVGERITQMQRLTNI 322
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 2e-41
Identities = 76/325 (23%), Positives = 112/325 (34%), Gaps = 55/325 (16%)
Query: 454 FSYAELKKSTKSFK--EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTI 511
+ +E + K E +GRG GAVYKG L D R VAVK ++ + + +
Sbjct: 3 AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRV 61
Query: 512 GKIYHMNLVRMWGFCSEG-----RHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGT 566
+ H N+ R LL+ EY SL K+L S + W ++A
Sbjct: 62 PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-SLHTSDWVSSCRLAHSV 120
Query: 567 AKGLAYLH--------------H-----------DEFEPKIADFGLAKLSQRGSNSSQFS 601
+GLAYLH H ++ I+DFGL+
Sbjct: 121 TRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGE 180
Query: 602 Q------IRGTKGYMAPE-------WASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVE 648
+ GT YMAPE +VD+Y+ G++ E+
Sbjct: 181 EDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240
Query: 649 DGEGQEAELKRFVREVKRKILYEE--EAWIEEIVDPRLKGKFNTNQAA--TLIGIGISCV 704
E Q A F EV +E+ E P+ + N A +L C
Sbjct: 241 VPEYQMA----FQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCW 296
Query: 705 DEDRSKRPTMDSVVQSLLECETESE 729
D+D R T + + E E
Sbjct: 297 DQDAEARLTAQXAEERMAELMMIWE 321
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 2e-39
Identities = 61/301 (20%), Positives = 116/301 (38%), Gaps = 72/301 (23%)
Query: 456 YAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY 515
Y E++ +E +GRG G V K + VA+K++ + + F E+ + ++
Sbjct: 7 YKEIE-----VEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESERKA-FIVELRQLSRVN 59
Query: 516 HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS---YFLGWKERFKVALGTAKGLAY 572
H N+V+++G C L+ EY E SL L + + L ++G+AY
Sbjct: 60 HPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 117
Query: 573 LHHDEFEP--------------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
LH + + KI DFG A Q + + +G+ +MAP
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ-----THMTNNKGSAAWMAP 172
Query: 613 EWASNLPITAKVDVYSYGVVILEMV------KGIRLSNWVVEDGEGQEAELKRFVREVKR 666
E + K DV+S+G+++ E++ I + + V R
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA----------VHNGTR 222
Query: 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726
+ + + ++ +L+ C +D S+RP+M+ +V+ +
Sbjct: 223 PP-------LIKNLPKPIE---------SLM---TRCWSKDPSQRPSMEEIVKIMTHLMR 263
Query: 727 E 727
Sbjct: 264 Y 264
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 5e-38
Identities = 68/289 (23%), Positives = 115/289 (39%), Gaps = 69/289 (23%)
Query: 466 FKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRM 522
KE++G G G V++ G VAVK L + E F EV+ + ++ H N+V
Sbjct: 41 IKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHL---FSSYFLGWKERFKVALGTAKGLAYLH----- 574
G ++ + ++ EY+ + SL + L + L + R +A AKG+ YLH
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 575 -------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
++ K+ DFGL++L SS+ GT +MAPE + P
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSK--SAAGTPEWMAPEVLRDEPSN 217
Query: 622 AKVDVYSYGVVILEMV---------KGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672
K DVYS+GV++ E+ ++ V + R
Sbjct: 218 EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK-------RLE----------- 259
Query: 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
I ++P++ A +I C + KRP+ +++ L
Sbjct: 260 ---IPRNLNPQV---------AAII---EGCWTNEPWKRPSFATIMDLL 293
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 1e-37
Identities = 68/320 (21%), Positives = 116/320 (36%), Gaps = 91/320 (28%)
Query: 448 SSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV--- 503
S+ + E++ +++++G+GG G V+KG + D VA+K L E
Sbjct: 10 KSRLPTLADNEIE-----YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 504 -----FWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWK 557
F EV + + H N+V+++G ++ E+V L L ++ + W
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 558 ERFKVALGTAKGLAYLH-----------------------HDEFEPKIADFGLAKLSQRG 594
+ ++ L A G+ Y+ + K+ADFGL++ S
Sbjct: 123 VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS 182
Query: 595 SNSSQFSQIRGTKGYMAPE--WASNLPITAKVDVYSYGVVILEMVKG-----------IR 641
+ G +MAPE A T K D YS+ +++ ++ G I+
Sbjct: 183 VSGL-----LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 642 LSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGI 701
N + E+G R I E PRL +I
Sbjct: 238 FINMIREEGL-------RPT--------------IPEDCPPRL---------RNVI---E 264
Query: 702 SCVDEDRSKRPTMDSVVQSL 721
C D KRP +V+ L
Sbjct: 265 LCWSGDPKKRPHFSYIVKEL 284
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 2e-37
Identities = 63/311 (20%), Positives = 104/311 (33%), Gaps = 58/311 (18%)
Query: 466 FKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
+++G+G G V+ G G VAVK + E+ + H N++
Sbjct: 41 MVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAA 99
Query: 526 CSEGRHR----LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEFEP- 580
+G LI +Y E SL +L S L K K+A + GL +LH + F
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYL-KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 581 -----------------------KIADFGLAKLSQRGSNSSQFSQI--RGTKGYMAPE-- 613
IAD GLA +N GTK YM PE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL 218
Query: 614 ----WASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVE------DGEGQEAELKRFVRE 663
++ D+YS+G+++ E+ + V E D + +
Sbjct: 219 DESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREI 278
Query: 664 V--KRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
V K+ W + ++ L+ C + + R T V ++L
Sbjct: 279 VCIKKLRPSFPNRWSSDECLRQM---------GKLM---TECWAHNPASRLTALRVKKTL 326
Query: 722 LECETESEIHI 732
+ +I +
Sbjct: 327 AKMSESQDIKL 337
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 6e-37
Identities = 71/283 (25%), Positives = 119/283 (42%), Gaps = 54/283 (19%)
Query: 466 FKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRM 522
+ +G G G VYKG VAVK L + F EV + K H+N++
Sbjct: 28 VGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLH------- 574
G+ + ++ ++ E SL HL +S K+ +A TA+G+ YLH
Sbjct: 86 MGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR 144
Query: 575 ---------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE---WASNLPITA 622
H++ KI DFGLA R S S QF Q+ G+ +MAPE + P +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 623 KVDVYSYGVVILEMVKGIR----LSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678
+ DVY++G+V+ E++ G ++N + + V R L + + +
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINN------------RDQIIEMVGRGSLSPDLSKVRS 252
Query: 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
R+K L+ C+ + R +RP+ ++ +
Sbjct: 253 NCPKRMK---------RLM---AECLKKKRDERPSFPRILAEI 283
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 4e-35
Identities = 61/311 (19%), Positives = 111/311 (35%), Gaps = 58/311 (18%)
Query: 466 FKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
+E +G+G G V++G G VAVK + AE+ + H N++
Sbjct: 46 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA 104
Query: 526 CSEGR----HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH------- 574
++ L+ +Y E SL +L + Y + + K+AL TA GLA+LH
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 575 ------H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQI--RGTKGYMAPE-- 613
H IAD GLA +++ + GTK YMAPE
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 223
Query: 614 ----WASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVE------DGEGQEAELKRFVRE 663
+ + D+Y+ G+V E+ + + + D + ++ +
Sbjct: 224 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV 283
Query: 664 V--KRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
V ++ W + A ++ C + + R T + ++L
Sbjct: 284 VCEQKLRPNIPNRWQSCEALRVM---------AKIM---RECWYANGAARLTALRIKKTL 331
Query: 722 LECETESEIHI 732
+ + I +
Sbjct: 332 SQLSQQEGIKM 342
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 5e-35
Identities = 65/308 (21%), Positives = 106/308 (34%), Gaps = 58/308 (18%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEV---FWAEVSTIGK 513
+ S E LG+G G K G + +K L + EE F EV +
Sbjct: 6 IFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKEL--IRFDEETQRTFLKEVKVMRC 63
Query: 514 IYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAY 572
+ H N+++ G + + I EY++ +L + S W +R A A G+AY
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAY 123
Query: 573 LH-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQ------------IR 604
LH H + +ADFGLA+L + + +
Sbjct: 124 LHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV 664
G +MAPE + KVDV+S+G+V+ E++ + D + + VR
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVN----ADPDYLPRTMDFGLNVRGF 239
Query: 665 KRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724
+ P + + C D D KRP+ + L
Sbjct: 240 LDRY-------CPPNCPPSF---------FPIT---VRCCDLDPEKRPSFVKLEHWLETL 280
Query: 725 ETESEIHI 732
H+
Sbjct: 281 RMHLAGHL 288
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 1e-34
Identities = 54/206 (26%), Positives = 82/206 (39%), Gaps = 38/206 (18%)
Query: 466 FKEELGRGGSGAVYKGVLADGRAVAVKRL-----GDLHQGEEVFWAEVSTIGKIYHMNLV 520
+E +G GG G VY+ G VAVK D+ Q E E + H N++
Sbjct: 11 LEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEFEP 580
+ G C + + L+ E+ L++ L S + A+ A+G+ YLH + P
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNRVL-SGKRIPPDILVNWAVQIARGMNYLHDEAIVP 128
Query: 581 ---------------------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE 613
KI DFGLA+ R + S G +MAPE
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA----AGAYAWMAPE 184
Query: 614 WASNLPITAKVDVYSYGVVILEMVKG 639
+ DV+SYGV++ E++ G
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTG 210
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 5e-34
Identities = 56/295 (18%), Positives = 98/295 (33%), Gaps = 73/295 (24%)
Query: 466 FKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRM 522
E +G+G G VY G VA++ + E+ F EV + H N+V
Sbjct: 37 IGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF 94
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLH-----H- 575
G C H +I + ++L + L + ++A KG+ YLH H
Sbjct: 95 MGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHK 154
Query: 576 ---------DEFEPKIADFGLAKLSQRGSNSSQFSQIR---GTKGYMAPE---------W 614
D + I DFGL +S + ++R G ++APE
Sbjct: 155 DLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTE 214
Query: 615 ASNLPITAKVDVYSYGVVILEMV------KGIRLSN--WVVEDGEGQEAELKRFVREVKR 666
LP + DV++ G + E+ K W + G K
Sbjct: 215 EDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGM-------------KP 261
Query: 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
+ + + + ++ + C ++ +RPT ++ L
Sbjct: 262 NL-------SQIGMGKEIS---------DIL---LFCWAFEQEERPTFTKLMDML 297
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 5e-34
Identities = 64/304 (21%), Positives = 106/304 (34%), Gaps = 58/304 (19%)
Query: 466 FKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
E +G+G G V++G G VAVK + E+ + H N++
Sbjct: 12 LLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 526 CSEGRHR----LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEFEP- 580
RH LI Y E SL +L L ++ L A GLA+LH + F
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 581 -----------------------KIADFGLAKLSQRGSNSSQFSQI--RGTKGYMAPE-- 613
IAD GLA + + +N GTK YMAPE
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 614 ----WASNLPITAKVDVYSYGVVILEMVKGIRLSNWVV------EDGEGQEAELKRFVRE 663
+VD++++G+V+ E+ + + + V D + + +
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKV 249
Query: 664 V--KRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
V ++ W + L A L+ C ++ S R T + ++L
Sbjct: 250 VCVDQQRPNIPNRWFSDPTLTSL---------AKLM---KECWYQNPSARLTALRIKKTL 297
Query: 722 LECE 725
+ +
Sbjct: 298 TKID 301
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 7e-33
Identities = 56/300 (18%), Positives = 101/300 (33%), Gaps = 78/300 (26%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVR 521
+F +L SG ++KG G + VK L F E + H N++
Sbjct: 13 NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 522 MWGFCSE--GRHRLLIYEYVEKQSLDKHLFS--SYFLGWKERFKVALGTAKGLAYLHH-- 575
+ G C H LI ++ SL L ++ + + K AL A+G+A+LH
Sbjct: 72 VLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE 131
Query: 576 ----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
++ +I+ + Q ++APE P
Sbjct: 132 PLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR-------MYAPAWVAPEALQKKP 184
Query: 620 ---ITAKVDVYSYGVVILEMV---------KGIRLSNWVVEDGEGQEAELKRFVREVKRK 667
D++S+ V++ E+V + + V +G R
Sbjct: 185 EDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGL-------RPT------ 231
Query: 668 ILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727
I + P + + L+ C++ED +KRP D +V L + + +
Sbjct: 232 --------IPPGISPHV---------SKLM---KICMNEDPAKRPKFDMIVPILEKMQDK 271
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 3e-24
Identities = 51/201 (25%), Positives = 75/201 (37%), Gaps = 32/201 (15%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVR 521
F E+GRG VYKG+ VA L D + F E + + H N+VR
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR 89
Query: 522 ---MWGFCSEGRHRLLIY-EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE 577
W +G+ +++ E + +L +L + K KGL +LH
Sbjct: 90 FYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT 149
Query: 578 F-------------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
KI D GLA L + + + GT +MAPE
Sbjct: 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VIGTPEFMAPEMYEE- 204
Query: 619 PITAKVDVYSYGVVILEMVKG 639
VDVY++G+ +LEM
Sbjct: 205 KYDESVDVYAFGMCMLEMATS 225
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 5e-24
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 28/204 (13%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRL--GDLHQGEEVFWAEVSTIGKI 514
L E++GRG G V+ G L AD VAVK + F E + +
Sbjct: 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY 169
Query: 515 YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL 573
H N+VR+ G C++ + ++ E V+ L + L K ++ A G+ YL
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL 229
Query: 574 H-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY----MAPE 613
H ++ KI+DFG+++ G ++ G + APE
Sbjct: 230 ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG----VYAASGGLRQVPVKWTAPE 285
Query: 614 WASNLPITAKVDVYSYGVVILEMV 637
+ +++ DV+S+G+++ E
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETF 309
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 2e-23
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 24/200 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
ELK+ + +ELG G G V G VAVK + + E+ F+ E T+ K+ H
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHP 63
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYL--- 573
LV+ +G CS+ ++ EY+ L +L S L + ++ +G+A+L
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH 123
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASN 617
H D + K++DFG+ R Q+ GTK + APE
Sbjct: 124 QFIHRDLAARNCLVDRDLCVKVSDFGMT----RYVLDDQYVSSVGTKFPVKWSAPEVFHY 179
Query: 618 LPITAKVDVYSYGVVILEMV 637
++K DV+++G+++ E+
Sbjct: 180 FKYSSKSDVWAFGILMWEVF 199
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 6e-23
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 34/205 (16%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ +F +ELG G G V G VA+K + + E+ F E + + H
Sbjct: 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 79
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKV------ALGTAKGLA 571
LV+++G C++ R +I EY+ L +L + RF+ + +
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQLLEMCKDVCEAME 134
Query: 572 YL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAP 612
YL H D + K++DFGL+ R +++ G+K + P
Sbjct: 135 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS----RYVLDDEYTSSVGSKFPVRWSPP 190
Query: 613 EWASNLPITAKVDVYSYGVVILEMV 637
E ++K D++++GV++ E+
Sbjct: 191 EVLMYSKFSSKSDIWAFGVLMWEIY 215
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 6e-23
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 26/201 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + +++LG G G V+ VAVK + E F AE + + + H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 243
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYL-- 573
LV++ ++ +I E++ K SL L S + + A+G+A++
Sbjct: 244 KLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
Query: 574 ----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG---YMAPEWAS 616
H D KIADFGLA R ++++ G K + APE +
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGLA----RVIEDNEYTAREGAKFPIKWTAPEAIN 358
Query: 617 NLPITAKVDVYSYGVVILEMV 637
T K DV+S+G++++E+V
Sbjct: 359 FGSFTIKSDVWSFGILLMEIV 379
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 97.7 bits (244), Expect = 8e-23
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 34/205 (16%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
+ S +F +E+G G G V+ G + VA+K + + EE F E + K+ H
Sbjct: 4 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP 63
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKV------ALGTAKGLA 571
LV+++G C E L+ E++E L +L + + F L +G+A
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQ-----RGLFAAETLLGMCLDVCEGMA 118
Query: 572 YL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAP 612
YL H D K++DFG+ R Q++ GTK + +P
Sbjct: 119 YLEEACVIHRDLAARNCLVGENQVIKVSDFGMT----RFVLDDQYTSSTGTKFPVKWASP 174
Query: 613 EWASNLPITAKVDVYSYGVVILEMV 637
E S ++K DV+S+GV++ E+
Sbjct: 175 EVFSFSRYSSKSDVWSFGVLMWEVF 199
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-22
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 26/202 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 275
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLH 574
NLV++ G C+ +I E++ +L +L + +A + + YL
Sbjct: 276 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 335
Query: 575 -----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWA 615
H + K+ADFGL+ R ++ G K + APE
Sbjct: 336 KKNFIHRNLAARNCLVGENHLVKVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESL 391
Query: 616 SNLPITAKVDVYSYGVVILEMV 637
+ + K DV+++GV++ E+
Sbjct: 392 AYNKFSIKSDVWAFGVLLWEIA 413
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 5e-22
Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWA----EVSTIGKIYHMNLVRM 522
++LG GG VY VA+K + + +E EV ++ H N+V M
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH------- 575
E L+ EY+E +L +++ S L G+ + H
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRD 136
Query: 576 ---------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
KI DFG+AK + ++ +Q + + GT Y +PE A D+
Sbjct: 137 IKPQNILIDSNKTLKIFDFGIAK-ALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDI 195
Query: 627 YSYGVVILEMVKG 639
YS G+V+ EM+ G
Sbjct: 196 YSIGIVLYEMLVG 208
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 99.2 bits (247), Expect = 6e-22
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 26/201 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 322
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYL-- 573
LV+++ SE ++ EY+ K SL L +L + +A A G+AY+
Sbjct: 323 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 381
Query: 574 ----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
H D K+ADFGLA R ++++ +G K + APE A
Sbjct: 382 MNYVHRDLRAANILVGENLVCKVADFGLA----RLIEDNEYTARQGAKFPIKWTAPEAAL 437
Query: 617 NLPITAKVDVYSYGVVILEMV 637
T K DV+S+G+++ E+
Sbjct: 438 YGRFTIKSDVWSFGILLTELT 458
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 98.3 bits (245), Expect = 7e-22
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 26/201 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYL-- 573
LV+++ SE ++ EY+ K SL L +L + +A A G+AY+
Sbjct: 240 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 574 ----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
H D K+ADFGLA R ++++ +G K + APE A
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLA----RLIEDNEYTARQGAKFPIKWTAPEAAL 354
Query: 617 NLPITAKVDVYSYGVVILEMV 637
T K DV+S+G+++ E+
Sbjct: 355 YGRFTIKSDVWSFGILLTELT 375
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 7e-22
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 26/201 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T E LG G G V+ G VAVK L + F AE + + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYL-- 573
LVR++ ++ +I EY+E SL L + L + +A A+G+A++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 574 ----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
H D KIADFGLA R ++++ G K + APE +
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA----RLIEDNEYTAREGAKFPIKWTAPEAIN 183
Query: 617 NLPITAKVDVYSYGVVILEMV 637
T K DV+S+G+++ E+V
Sbjct: 184 YGTFTIKSDVWSFGILLTEIV 204
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 1e-21
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 26/199 (13%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
L + +G+G G V G G VAVK + + + F AE S + ++ H
Sbjct: 17 ALNMKELKLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKNDATAQA-FLAEASVMTQLRHS 74
Query: 518 NLVRMWGFCSEGRHRLLI-YEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYL- 573
NLV++ G E + L I EY+ K SL +L S LG K +L + + YL
Sbjct: 75 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
H D + K++DFGL K + ++ + ++ + APE
Sbjct: 135 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-VK----WTAPEALREK 189
Query: 619 PITAKVDVYSYGVVILEMV 637
+ K DV+S+G+++ E+
Sbjct: 190 KFSTKSDVWSFGILLWEIY 208
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 2e-21
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 26/202 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR-AVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYL- 573
NLV++ G C+ +I E++ +L +L + +A + + YL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWA 615
H D K+ADFGL+ R ++ G K + APE
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 616 SNLPITAKVDVYSYGVVILEMV 637
+ + K DV+++GV++ E+
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIA 206
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 2e-21
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 28/199 (14%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWA----EVSTIGKIYHMNLVRM 522
E LG GG V+ L D R VAVK L + F+ E + H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 523 --WGFCSEGRHRLLIY---EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH--- 574
G +E L Y EYV+ +L + + + K +V + L + H
Sbjct: 78 YDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 575 --H-----------DEFEPKIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASNLPI 620
H K+ DFG+A+ ++ G++ +Q + + GT Y++PE A +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 621 TAKVDVYSYGVVILEMVKG 639
A+ DVYS G V+ E++ G
Sbjct: 197 DARSDVYSLGCVLYEVLTG 215
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 3e-21
Identities = 50/210 (23%), Positives = 79/210 (37%), Gaps = 35/210 (16%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL-----ADGRAVAVKRLGDLHQGEEV--FWAEVST 510
K +LG G G V G VAVK L + + E+
Sbjct: 27 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDI 86
Query: 511 IGKIYHMNLVRMWGFCSEGRHR--LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAK 568
+ +YH ++++ G C + L+ EYV SL +L + +G + A +
Sbjct: 87 LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICE 145
Query: 569 GLAYLH-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQ-----IRGTK 607
G+AYLH H ++ KI DFGLAK G + + +
Sbjct: 146 GMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF--- 202
Query: 608 GYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ APE DV+S+GV + E++
Sbjct: 203 -WYAPECLKEYKFYYASDVWSFGVTLYELL 231
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 3e-21
Identities = 52/235 (22%), Positives = 84/235 (35%), Gaps = 35/235 (14%)
Query: 432 RRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFK--EELGRGGSGAVYKGV-LADGRA 488
+ Q + E+ L ++ + E ++ +GRG G V++ G
Sbjct: 26 KLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQ 85
Query: 489 VAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY-EYVEKQSLDKH 547
AVK++ L E+ + +V ++G EG + I+ E +E SL +
Sbjct: 86 CAVKKV-RLEVFRV---EELVACAGLSSPRIVPLYGAVREG-PWVNIFMELLEGGSLGQL 140
Query: 548 LFSSYFLGWKERFKVALGTA---KGLAYLH-----------------HDEFEPKIADFGL 587
+ E +GL YLH D + DFG
Sbjct: 141 I--KQMGCLPEDR-ALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGH 197
Query: 588 AKLSQRGSNSSQFSQ---IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
A Q I GT+ +MAPE P AKVD++S ++L M+ G
Sbjct: 198 ALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 7e-21
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 28/200 (14%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRL-GDLHQGEEVFWAEVSTIGKIYH 516
L + +G+G G V G G VAVK + D + F AE S + ++ H
Sbjct: 189 ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRH 245
Query: 517 MNLVRMWGFCSEGRHRL-LIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYL 573
NLV++ G E + L ++ EY+ K SL +L S LG K +L + + YL
Sbjct: 246 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 574 ------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN 617
H D + K++DFGL K + ++ + ++ + APE
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-VK----WTAPEALRE 360
Query: 618 LPITAKVDVYSYGVVILEMV 637
+ K DV+S+G+++ E+
Sbjct: 361 KKFSTKSDVWSFGILLWEIY 380
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 7e-21
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 34/233 (14%)
Query: 432 RRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRA--- 488
+ + QA+ E+ S + ++ +G G G VYKG+L
Sbjct: 19 NLYFQGAMGSDPNQAVLKFTT-----EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKE 73
Query: 489 --VAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL 544
VA+K L G + F E +G+ H N++R+ G S+ + ++I EY+E +L
Sbjct: 74 VPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGAL 133
Query: 545 DKHLFSSYF-LGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGL 587
DK L + + G A G+ YL H D K++DFGL
Sbjct: 134 DKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGL 193
Query: 588 AKLSQRGSNSSQFSQIRGTK---GYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+++ + ++ + G K + APE S T+ DV+S+G+V+ E++
Sbjct: 194 SRVLEDDPEATYTTS--GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVM 244
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 1e-20
Identities = 43/195 (22%), Positives = 67/195 (34%), Gaps = 26/195 (13%)
Query: 468 EELGRGGSGAVYKG---VLADGRAVAVKRLGDLHQGEEVFWA----EVSTIGKIYHMNLV 520
+GRGG G VY+ V R VA+K + + + VF E T G++ ++V
Sbjct: 40 RLVGRGGMGDVYEAEDTVR--ERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVV 97
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH----- 575
+ F + + L L L + L H
Sbjct: 98 PIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATH 157
Query: 576 -----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ + DFG+A + +Q GT YMAPE S T +
Sbjct: 158 RDVKPENILVSADDFAYLVDFGIAS-ATTDEKLTQLGNTVGTLYYMAPERFSESHATYRA 216
Query: 625 DVYSYGVVILEMVKG 639
D+Y+ V+ E + G
Sbjct: 217 DIYALTCVLYECLTG 231
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 1e-20
Identities = 52/209 (24%), Positives = 83/209 (39%), Gaps = 31/209 (14%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA-----DGRAVAVKRLGDLHQGEEV--FWAEVST 510
+K +LG G G V G VAVK L G + E+
Sbjct: 17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEI 76
Query: 511 IGKIYHMNLVRMWGFCSEGRHR--LLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTA 567
+ +YH N+V+ G C+E LI E++ SL ++L + + K++ K A+
Sbjct: 77 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 136
Query: 568 KGLAYLH-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---G 608
KG+ YL H E + KI DFGL K + ++ ++
Sbjct: 137 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE--TDKEYYTVKDDRDSPVF 194
Query: 609 YMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ APE DV+S+GV + E++
Sbjct: 195 WYAPECLMQSKFYIASDVWSFGVTLHELL 223
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 93.0 bits (231), Expect = 2e-20
Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 32/240 (13%)
Query: 431 FRRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVA 490
F RQ + S + +K S +++G GGS V++ + + A
Sbjct: 25 FERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYA 84
Query: 491 VKR--LGDLHQGE-EVFWAEVSTIGKIYHMNL--VRMWGFCSEGRHRLLIYEYVEKQSLD 545
+K L + + + E++ + K+ + +R++ + ++ ++ E L+
Sbjct: 85 IKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNI-DLN 143
Query: 546 KHLFSSYFLGWKERFKVALGTAKGLAYLH-----H----------DEFEPKIADFGLAKL 590
L + ER + + +H H + K+ DFG+A
Sbjct: 144 SWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQ 203
Query: 591 SQRGSNSSQFSQIRGTKGYMAPE-----------WASNLPITAKVDVYSYGVVILEMVKG 639
Q + S G YM PE S I+ K DV+S G ++ M G
Sbjct: 204 MQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 263
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 2e-20
Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 33/232 (14%)
Query: 432 RRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGR---- 487
+ P + EE +A S R E++ S ++ +G G SG V G L
Sbjct: 24 QFYAEPHTYEEPGRAGRSFTR-----EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDV 78
Query: 488 AVAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLD 545
VA+K L G + F +E S +G+ H N++R+ G + GR +++ EY+E SLD
Sbjct: 79 PVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 546 KHLFSS-YFLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLA 588
L + + + G G+ YL H D K++DFGL+
Sbjct: 139 TFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
Query: 589 KLSQRGSNSSQFSQIRGTK---GYMAPEWASNLPITAKVDVYSYGVVILEMV 637
++ + +++ + G K + APE + ++ DV+S+GVV+ E++
Sbjct: 199 RVLEDDPDAAYTTT--GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 3e-20
Identities = 44/222 (19%), Positives = 80/222 (36%), Gaps = 55/222 (24%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRA--------VAVKRL--GDLHQGEEVFWAE 507
+++ F E LG+G ++KGV + V +K L + E F+
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSES-FFEA 62
Query: 508 VSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGT 566
S + K+ H +LV +G C G +L+ E+V+ SLD +L + + + +VA
Sbjct: 63 ASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQL 122
Query: 567 AKGLAYL------HHD---------------EFEP---KIADFGLAKLSQRGSNSSQFSQ 602
A + +L H + P K++D G++
Sbjct: 123 AAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT------------ 170
Query: 603 IRGTKGY------MAPEWASNLPI-TAKVDVYSYGVVILEMV 637
+ + PE N D +S+G + E+
Sbjct: 171 VLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEIC 212
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 93.3 bits (232), Expect = 3e-20
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 28/198 (14%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMW 523
K+ LG G G + + D R VAVKR+ L + EV + + H N++R +
Sbjct: 27 CPKDVLGHGAEGTIVYRGMFDNRDVAVKRI--LPECFSFADREVQLLRESDEHPNVIRYF 84
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH--------- 574
+ + + + E + + E + T GLA+LH
Sbjct: 85 CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDL 144
Query: 575 ------------HDEFEPKIADFGLAKLSQRGSNS-SQFSQIRGTKGYMAPE---WASNL 618
H + + I+DFGL K G +S S+ S + GT+G++APE
Sbjct: 145 KPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKE 204
Query: 619 PITAKVDVYSYGVVILEM 636
T VD++S G V +
Sbjct: 205 NPTYTVDIFSAGCVFYYV 222
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 6e-20
Identities = 54/217 (24%), Positives = 83/217 (38%), Gaps = 31/217 (14%)
Query: 448 SSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVK--RLGDLHQGEEVF 504
S + Y E ++ + LG+G G VY G L++ +A+K D + +
Sbjct: 11 ESDLLEYDY-EYDENGD--RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH 67
Query: 505 WAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL 564
E++ + H N+V+ G SE + E V SL L S + +
Sbjct: 68 -EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF 126
Query: 565 GTA---KGLAYLH-----H----------DEFE--PKIADFGLAKLSQRGSNSSQFSQIR 604
T +GL YLH H + + KI+DFG +K + +
Sbjct: 127 YTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSK--RLAGINPCTETFT 184
Query: 605 GTKGYMAPE--WASNLPITAKVDVYSYGVVILEMVKG 639
GT YMAPE D++S G I+EM G
Sbjct: 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 221
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 7e-20
Identities = 48/211 (22%), Positives = 79/211 (37%), Gaps = 41/211 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRA----VAVKRL--GDLHQGEEVFWAEVSTI 511
+ + LG G G VY+GV + + VAVK +E F +E +
Sbjct: 8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 67
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKV------ALG 565
+ H ++V++ G E +I E L +L + K KV +L
Sbjct: 68 KNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERN-----KNSLKVLTLVLYSLQ 121
Query: 566 TAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK-- 607
K +AYL H D K+ DFGL+ R + + T+
Sbjct: 122 ICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS----RYIEDEDYYKASVTRLP 177
Query: 608 -GYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+M+PE + T DV+ + V + E++
Sbjct: 178 IKWMSPESINFRRFTTASDVWMFAVCMWEIL 208
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 8e-20
Identities = 51/211 (24%), Positives = 79/211 (37%), Gaps = 41/211 (19%)
Query: 459 LKKSTKSFKEELGRGGSGAVYKGVLADGR-----AVAVKRL--GDLHQGEEVFWAEVSTI 511
LK++ + LG G G VYKG+ VA+K L + + E +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKV------ALG 565
+ + ++ R+ G C LI + + L ++ K+ +
Sbjct: 72 ASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREH-----KDNIGSQYLLNWCVQ 125
Query: 566 TAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK-- 607
AKG+ YL H D KI DFGLAKL + G K
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG---AEEKEYHAEGGKVP 182
Query: 608 -GYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+MA E + T + DV+SYGV + E++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELM 213
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 1e-19
Identities = 46/232 (19%), Positives = 87/232 (37%), Gaps = 50/232 (21%)
Query: 448 SSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKR--LGDLHQGE-EVF 504
++ F +K S +++G GGS V++ + + A+K L + + +
Sbjct: 14 GTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSY 73
Query: 505 WAEVSTIGKIYHMNL--VRMWGFCSEGRHRLLIYEY---------VEKQSLDKHLFSSYF 553
E++ + K+ + +R++ + ++ ++ E +K+S+D SY
Sbjct: 74 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY- 132
Query: 554 LGWKERFKVALGTAKGLAYLH-----H----------DEFEPKIADFGLAKLSQRGSNSS 598
WK + + +H H + K+ DFG+A Q + S
Sbjct: 133 --WKN-------MLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSV 183
Query: 599 QFSQIRGTKGYMAPE-----------WASNLPITAKVDVYSYGVVILEMVKG 639
GT YM PE S I+ K DV+S G ++ M G
Sbjct: 184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 235
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 1e-19
Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 32/209 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL-----ADGRAVAVKRL--GDLHQGEEVFWAEVST 510
+ ++ F ++LG+G G+V G VAVK+L + F E+
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEI 64
Query: 511 IGKIYHMNLVRMWGFCSEGRHR--LLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTA 567
+ + H N+V+ G C R LI EY+ SL +L + + +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 568 KGLAYLH-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG--- 608
KG+ YL H +E KI DFGL K+ + F +
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP--QDKEFFKVKEPGESPIF 182
Query: 609 YMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ APE + + DV+S+GVV+ E+
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELF 211
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 1e-19
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 33/227 (14%)
Query: 437 PSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVL----ADGRAVAVK 492
P + E+ Q + + EL + S + +G G G V G L +VA+K
Sbjct: 25 PHTFEDPTQTVHEFAK-----ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 493 RL--GDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS 550
L G + F E S +G+ H N++R+ G ++ + +++ EY+E SLD L
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
Query: 551 -SYFLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQR 593
+ + G A G+ YL H D K++DFGL ++ +
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE- 198
Query: 594 GSNSSQFSQIRGTK---GYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ RG K + +PE + T+ DV+SYG+V+ E++
Sbjct: 199 -DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 2e-19
Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 36/211 (17%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL-----ADGRAVAVKRL--GDLHQGEEVFWAEVST 510
+ ++ F ++LG+G G+V G VAVK+L + F E+
Sbjct: 37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEI 95
Query: 511 IGKIYHMNLVRMWGFCSEGRHR--LLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTA 567
+ + H N+V+ G C R LI EY+ SL +L + + +
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 155
Query: 568 KGLAYLH-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQ-----IRGT 606
KG+ YL H +E KI DFGL K+ + + + I
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF-- 213
Query: 607 KGYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ APE + + DV+S+GVV+ E+
Sbjct: 214 --WYAPESLTESKFSVASDVWSFGVVLYELF 242
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 2e-19
Identities = 54/219 (24%), Positives = 80/219 (36%), Gaps = 44/219 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR------AVAVKRLGDLHQGEEV--FWAEVS 509
E+ + + LG G G VY+G ++ VAVK L ++ ++ F E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS-------YFLGWKERFKV 562
I K H N+VR G + R ++ E + L L + L + V
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 563 ALGTAKGLAYL------HHD-------------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
A A G YL H D KI DFG+A+ R S
Sbjct: 146 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR----- 200
Query: 604 RGTKGY-----MAPEWASNLPITAKVDVYSYGVVILEMV 637
+G M PE T+K D +S+GV++ E+
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 2e-19
Identities = 43/212 (20%), Positives = 81/212 (38%), Gaps = 50/212 (23%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKR--LGDLHQGE-EVFWAEVSTIGKIYHMNL--VRM 522
+++G GGS V++ + + A+K L + + + E++ + K+ + +R+
Sbjct: 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74
Query: 523 WGFCSEGRHRLLIYEY---------VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
+ + ++ ++ E +K+S+D SY WK + + +
Sbjct: 75 YDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY---WKN-------MLEAVHTI 124
Query: 574 H-----H----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE----- 613
H H + K+ DFG+A Q + S GT YM PE
Sbjct: 125 HQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 184
Query: 614 ------WASNLPITAKVDVYSYGVVILEMVKG 639
S I+ K DV+S G ++ M G
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYG 216
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 2e-19
Identities = 49/215 (22%), Positives = 79/215 (36%), Gaps = 44/215 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL-----ADGRAVAVKRLGDLH-QGEEVFWAEVSTI 511
++ + +LG+G G+V G VAVK+L + F E+ +
Sbjct: 19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL 78
Query: 512 GKIYHMNLVRMWGFCSEGRHR--LLIYEYVEKQSLDKHLFSSYFLGWKERFKV------A 563
++ +V+ G + L+ EY+ L L + R +
Sbjct: 79 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH-----RARLDASRLLLYS 133
Query: 564 LGTAKGLAYLH-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQ----- 602
KG+ YL H E KIADFGLAKL + +
Sbjct: 134 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 193
Query: 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMV 637
I + APE S+ + + DV+S+GVV+ E+
Sbjct: 194 IF----WYAPESLSDNIFSRQSDVWSFGVVLYELF 224
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 91.8 bits (228), Expect = 2e-19
Identities = 45/198 (22%), Positives = 78/198 (39%), Gaps = 37/198 (18%)
Query: 468 EELGRGGSGAVYKGV--LADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
+ GG G +Y + +GR V +K L GD + + + AE + ++ H ++V++
Sbjct: 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD-AEAQAMAMAERQFLAEVVHPSIVQI 144
Query: 523 WGFCSEGRHRL-----LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH--- 574
+ F ++ EYV QSL + L E L L+YLH
Sbjct: 145 FNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK--LPVAEAIAYLLEILPALSYLHSIG 202
Query: 575 --HDEFEP----------KIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
+++ +P K+ D G ++ G + GT G+ APE P T
Sbjct: 203 LVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGY-------LYGTPGFQAPEIVRTGP-T 254
Query: 622 AKVDVYSYGVVILEMVKG 639
D+Y+ G + +
Sbjct: 255 VATDIYTVGRTLAALTLD 272
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 90.8 bits (225), Expect = 4e-19
Identities = 57/311 (18%), Positives = 103/311 (33%), Gaps = 29/311 (9%)
Query: 352 PNFPGIIYLKLPVSVEASEPAILNGTNPVCRLSKSQIVIGSPSMYDTTAKRVRWSYFYWF 411
F + L + ++ I S S + +
Sbjct: 227 TKFDTLWQL-VEYLKLKADGLIYCLKEACPNSSASNASGAAAPTLPAHPSTLTHPQRRID 285
Query: 412 ALAIGAIEVFVIASGWWLLFRRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELG 471
L R + +S+ E + + + + + ELG
Sbjct: 286 TLNSDGYTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELG 345
Query: 472 RGGSGAVYKGVLADGRA---VAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFC 526
G G+V +GV + VA+K L G E E + ++ + +VR+ G C
Sbjct: 346 CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC 405
Query: 527 SEGRHRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYL------HHD--- 576
+L+ E L K L + ++ + G+ YL H +
Sbjct: 406 QAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAA 464
Query: 577 -------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASNLPITAKVDV 626
KI+DFGL+K G++ S ++ K + APE + +++ DV
Sbjct: 465 RNVLLVNRHYAKISDFGLSKAL--GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 522
Query: 627 YSYGVVILEMV 637
+SYGV + E +
Sbjct: 523 WSYGVTMWEAL 533
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 4e-19
Identities = 48/212 (22%), Positives = 79/212 (37%), Gaps = 41/212 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR-----AVAVKRL--GDLHQGEEVFWAEVST 510
K++ + LG G G V+KGV V +K + Q + +
Sbjct: 9 IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA 68
Query: 511 IGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKV------AL 564
IG + H ++VR+ G C L+ +Y+ SL H+ + +
Sbjct: 69 IGSLDHAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQH-----RGALGPQLLLNWGV 122
Query: 565 GTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK- 607
AKG+ YL H + + ++ADFG+A L + K
Sbjct: 123 QIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLP---PDDKQLLYSEAKT 179
Query: 608 --GYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+MA E T + DV+SYGV + E++
Sbjct: 180 PIKWMALESIHFGKYTHQSDVWSYGVTVWELM 211
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 5e-19
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 28/194 (14%)
Query: 469 ELGRGGSGAVYKGVLADGRA---VAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
ELG G G V KG + VAVK L + ++ AE + + ++ + +VRM
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL------HHD 576
G C +L+ E E L+K+L + + K ++ + G+ YL H D
Sbjct: 84 IGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 142
Query: 577 ----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASNLPITAK 623
+ KI+DFGL+K ++ + + K + APE + ++K
Sbjct: 143 LAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHGKWPVKWYAPECINYYKFSSK 200
Query: 624 VDVYSYGVVILEMV 637
DV+S+GV++ E
Sbjct: 201 SDVWSFGVLMWEAF 214
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 5e-19
Identities = 50/213 (23%), Positives = 78/213 (36%), Gaps = 41/213 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL----ADGRAVAVKRL--GDLHQGEEV--FWAEVS 509
+ + E+LG G G V +G +VAVK L L Q E + F EV+
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 73
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKV------A 563
+ + H NL+R++G ++ E SL L + F + A
Sbjct: 74 AMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKH-----QGHFLLGTLSRYA 127
Query: 564 LGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK 607
+ A+G+ YL H D KI DFGL + + + + K
Sbjct: 128 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE--HRK 185
Query: 608 ---GYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ APE + D + +GV + EM
Sbjct: 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 218
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 5e-19
Identities = 53/219 (24%), Positives = 79/219 (36%), Gaps = 44/219 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR------AVAVKRLGDLHQGEEV--FWAEVS 509
E+ + + LG G G VY+G ++ VAVK L ++ ++ F E
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS-------YFLGWKERFKV 562
I K H N+VR G + R ++ E + L L + L + V
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 563 ALGTAKGLAYL------HHD-------------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
A A G YL H D KI DFG+A+ R
Sbjct: 187 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR----- 241
Query: 604 RGTKGY-----MAPEWASNLPITAKVDVYSYGVVILEMV 637
+G M PE T+K D +S+GV++ E+
Sbjct: 242 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 87.9 bits (218), Expect = 9e-19
Identities = 56/210 (26%), Positives = 83/210 (39%), Gaps = 34/210 (16%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR----AVAVKRLGDLHQGEEV--FWAEVSTI 511
F E +GRG G VY G L D AVK L + EV F E +
Sbjct: 85 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 144
Query: 512 GKIYHMNLVRMWGFCSEGRH-RLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKG 569
H N++ + G C L++ Y++ L + + + K+ L AKG
Sbjct: 145 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 204
Query: 570 LAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG----- 608
+ +L H D +F K+ADFGLA R +F + G
Sbjct: 205 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEFDSVHNKTGAKLPV 260
Query: 609 -YMAPEWASNLPITAKVDVYSYGVVILEMV 637
+MA E T K DV+S+GV++ E++
Sbjct: 261 KWMALESLQTQKFTTKSDVWSFGVLLWELM 290
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 1e-18
Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 28/196 (14%)
Query: 467 KEELGRGGSGAVYKGVLADGR---AVAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLVR 521
ELG G G+V +GV + VA+K L G E E + ++ + +VR
Sbjct: 15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYL------H 574
+ G C +L+ E L K L + ++ + G+ YL H
Sbjct: 75 LIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 133
Query: 575 HD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASNLPIT 621
D KI+DFGL+K G++ S ++ K + APE + +
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKAL--GADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 622 AKVDVYSYGVVILEMV 637
++ DV+SYGV + E +
Sbjct: 192 SRSDVWSYGVTMWEAL 207
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 86.3 bits (214), Expect = 1e-18
Identities = 46/213 (21%), Positives = 78/213 (36%), Gaps = 44/213 (20%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVK--RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ LGRGG G V++ D A+K RL + E EV + K+ H +VR +
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 525 FCSEG---------RHRLLIY---EYVEKQSLDKHLF---SSYFLGWKERFKVALGTAKG 569
E ++ +Y + K++L + + + L A+
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 570 LAYLH-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIR--------- 604
+ +LH H + K+ DFGL +
Sbjct: 131 VEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQ 190
Query: 605 -GTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
GTK YM+PE + KVD++S G+++ E+
Sbjct: 191 VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 1e-18
Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 34/202 (16%)
Query: 466 FKEELGRGGSGAVYKGVLADGR----AVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
+G+G G VY G D A+K L + + ++V F E + + H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 520 VRMWGFCSEGR-HRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYL---- 573
+ + G ++ Y+ L + + S K+ L A+G+ YL
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144
Query: 574 --HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEWA 615
H D F K+ADFGLA R ++ ++ + + A E
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLA----RDILDREYYSVQQHRHARLPVKWTALESL 200
Query: 616 SNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELL 222
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 2e-18
Identities = 49/200 (24%), Positives = 76/200 (38%), Gaps = 31/200 (15%)
Query: 465 SFKEELGRGGSGAVYKGVLADGR-----AVAVKRL--GDLHQGEEVFWAEVSTIGKIYHM 517
+ LG G G VYKG+ VA+K L + + E + + +
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNP 77
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYL--- 573
++ R+ G C LI + + L ++ +G + + AKG+ YL
Sbjct: 78 HVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASN 617
H D KI DFGLAKL + G K +MA E +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG---AEEKEYHAEGGKVPIKWMALESILH 193
Query: 618 LPITAKVDVYSYGVVILEMV 637
T + DV+SYGV + E++
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 2e-18
Identities = 56/210 (26%), Positives = 83/210 (39%), Gaps = 34/210 (16%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR----AVAVKRLGDLHQGEEV--FWAEVSTI 511
F E +GRG G VY G L D AVK L + EV F E +
Sbjct: 21 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 80
Query: 512 GKIYHMNLVRMWGFCSEGRH-RLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKG 569
H N++ + G C L++ Y++ L + + + K+ L AKG
Sbjct: 81 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 140
Query: 570 LAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG----- 608
+ YL H D +F K+ADFGLA R ++ + G
Sbjct: 141 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEYYSVHNKTGAKLPV 196
Query: 609 -YMAPEWASNLPITAKVDVYSYGVVILEMV 637
+MA E T K DV+S+GV++ E++
Sbjct: 197 KWMALESLQTQKFTTKSDVWSFGVLLWELM 226
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 3e-18
Identities = 48/211 (22%), Positives = 78/211 (36%), Gaps = 41/211 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR----AVAVKRL--GDLHQGEEVFWAEVSTI 511
E+++ +G G G V++G+ AVA+K E F E T+
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKV------ALG 565
+ H ++V++ G +E +I E L L K + A
Sbjct: 71 RQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR-----KYSLDLASLILYAYQ 124
Query: 566 TAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK-- 607
+ LAYL H D K+ DFGL+ R S + + K
Sbjct: 125 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS----RYMEDSTYYKASKGKLP 180
Query: 608 -GYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+MAPE + T+ DV+ +GV + E++
Sbjct: 181 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 88.0 bits (218), Expect = 3e-18
Identities = 48/211 (22%), Positives = 78/211 (36%), Gaps = 41/211 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR----AVAVKRL--GDLHQGEEVFWAEVSTI 511
E+++ +G G G V++G+ AVA+K E F E T+
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKV------ALG 565
+ H ++V++ G +E +I E L L K + A
Sbjct: 446 RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVR-----KFSLDLASLILYAYQ 499
Query: 566 TAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK-- 607
+ LAYL H D K+ DFGL+ R S + + K
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS----RYMEDSTYYKASKGKLP 555
Query: 608 -GYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+MAPE + T+ DV+ +GV + E++
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 4e-18
Identities = 63/303 (20%), Positives = 105/303 (34%), Gaps = 76/303 (25%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G V K D R A+K++ + +EV + + H +VR +
Sbjct: 10 EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 525 FCSEGRHRLL----------IY---EYVEKQSL-----DKHLFSSYFLGWKERFKVALGT 566
E R+ + ++ EY E +L ++L W+ F+ L
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR-LFRQIL-- 126
Query: 567 AKGLAYLH-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIR------ 604
+ L+Y+H H + KI DFGLAK R + +
Sbjct: 127 -EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 605 ------GTKGYMAPEWASNLPI-TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAEL 657
GT Y+A E K+D+YS G++ EM+ G + L
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPF-------STGMERVNIL 238
Query: 658 KRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSV 717
K+ R + E ++ K +I +D D +KRP ++
Sbjct: 239 KKL-----RSVSIEFPPDFDDNKMKVEKK---------IIR---LLIDHDPNKRPGARTL 281
Query: 718 VQS 720
+ S
Sbjct: 282 LNS 284
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 5e-18
Identities = 55/297 (18%), Positives = 107/297 (36%), Gaps = 71/297 (23%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFC 526
E +G GG G V+K DG+ +KR+ E EV + K+ H+N+V G
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRV---KYNNEKAEREVKALAKLDHVNIVHYNGCW 73
Query: 527 SEGRHRL----------------LIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAK 568
+ + E+ +K +L++ + + ++ K
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITK 133
Query: 569 GLAYLH-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
G+ Y+H + D + KI DFGL N + ++ +GT YM+P
Sbjct: 134 GVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL---KNDGKRTRSKGTLRYMSP 190
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672
E S+ +VD+Y+ G+++ E++ +E
Sbjct: 191 EQISSQDYGKEVDLYALGLILAELLHV-----------------CDTA---------FET 224
Query: 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729
+ ++ D + F + TL+ + + RP ++++L + E
Sbjct: 225 SKFFTDLRDGIISDIF-DKKEKTLLQ---KLLSKKPEDRPNTSEILRTLTVWKKSPE 277
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 8e-18
Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 44/219 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR------AVAVKRLGDLHQGEEV--FWAEVS 509
E+ + + ELG+G G VY+GV VA+K + + E F E S
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS----------YFLGWKER 559
+ + ++VR+ G S+G+ L+I E + + L +L S +
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ +
Sbjct: 141 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR----- 195
Query: 604 RGTKGY-----MAPEWASNLPITAKVDVYSYGVVILEMV 637
+G KG M+PE + T DV+S+GVV+ E+
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 9e-18
Identities = 55/223 (24%), Positives = 87/223 (39%), Gaps = 51/223 (22%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADG---RAVAVKRLGDLHQGEEV--FWAEVSTIG 512
L + F++ +G G G V K + A+KR+ + ++ F E+ +
Sbjct: 21 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 80
Query: 513 KI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKV--------- 562
K+ +H N++ + G C + L EY +L L S L F +
Sbjct: 81 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140
Query: 563 -------ALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQ 599
A A+G+ YL H D + KIADFGL+ RG
Sbjct: 141 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS----RGQE--- 193
Query: 600 FSQIRGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEMV 637
++ T G +MA E + T DV+SYGV++ E+V
Sbjct: 194 -VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 2e-17
Identities = 58/223 (26%), Positives = 90/223 (40%), Gaps = 48/223 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR------AVAVKRLGDLHQGEEV-FWAEVST 510
+K+ K ELG G G V+ + VAVK L + + F E
Sbjct: 37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 96
Query: 511 IGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS---------------YFLG 555
+ + H ++VR +G C+EGR L+++EY+ L++ L S LG
Sbjct: 97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 556 WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQ 599
+ VA A G+ YL H D KI DFG++ R S+
Sbjct: 157 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS----RDIYSTD 212
Query: 600 FSQIRGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ + G + +M PE T + DV+S+GVV+ E+
Sbjct: 213 YYR-VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 84.5 bits (209), Expect = 2e-17
Identities = 48/217 (22%), Positives = 79/217 (36%), Gaps = 49/217 (22%)
Query: 466 FKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWG 524
++ LG G SG V GR VAVKR+ L ++ E+ + + H N++R +
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRYYC 76
Query: 525 FCSEGRHRLLIYEYVEKQSLD-----KHLFSSYFLGWKER--FKVALGTAKGLAYLH--- 574
+ R + E +L K++ KE + A G+A+LH
Sbjct: 77 SETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK 135
Query: 575 --------------------------HDEFEPKIADFGLAKL--SQRGSNSSQFSQIRGT 606
+ I+DFGL K S + S + + GT
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGT 195
Query: 607 KGYMAPE-------WASNLPITAKVDVYSYGVVILEM 636
G+ APE + +T +D++S G V +
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 2e-17
Identities = 55/225 (24%), Positives = 84/225 (37%), Gaps = 50/225 (22%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR------AVAVKRLGDLHQGEEV--FWAEVS 509
E+ S F EELG G VYKG L AVA+K L D +G F E
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL----------------FSSYF 553
++ H N+V + G ++ + +I+ Y L + L
Sbjct: 65 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124
Query: 554 LGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNS 597
L + + A G+ YL H D + KI+D GL R +
Sbjct: 125 LEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLF----REVYA 180
Query: 598 SQFSQIRGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ + ++ G +MAPE + D++SYGVV+ E+
Sbjct: 181 ADYYKLLG-NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 3e-17
Identities = 52/224 (23%), Positives = 82/224 (36%), Gaps = 49/224 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR------AVAVKRLGDLHQGEEV--FWAEVS 509
E ++ F + LG G G V + VAVK L +E +E+
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 510 TIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSL--------------DKHLFSSYFL 554
+ + H N+V + G C+ G L+I EY L ++
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA 161
Query: 555 GWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSS 598
++ + A+G+A+L H D KI DFGLA+ SN
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-- 219
Query: 599 QFSQIRGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEMV 637
I +MAPE + T + DV+SYG+++ E+
Sbjct: 220 ---YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 5e-17
Identities = 41/221 (18%), Positives = 84/221 (38%), Gaps = 26/221 (11%)
Query: 441 EEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVK--RLGDL 497
+ + ++K + +++G G G DGR +K + +
Sbjct: 5 HHHSSGVDLGTENLYFQSMEKYVR--LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM 62
Query: 498 HQGE-EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW 556
E E EV+ + + H N+V+ E ++ +Y E L K + + + +
Sbjct: 63 SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLF 122
Query: 557 KERF--KVALGTAKGLAYLH-----H-----------DEFEPKIADFGLAKLSQRGSNSS 598
+E + L ++H H + ++ DFG+A++ +
Sbjct: 123 QEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA 182
Query: 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
+ + I GT Y++PE N P K D+++ G V+ E+
Sbjct: 183 R-ACI-GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTL 221
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 6e-17
Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 29/195 (14%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVK--RLGDLHQGEEVFWA--EVSTIGKIYHMNLVRM 522
+++GRG VY+ L DG VA+K ++ DL + E+ + ++ H N+++
Sbjct: 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY 97
Query: 523 WGFCSEGRHRLLIY-EYVEKQSLDKHL--FSSYFLGWKERF--KVALGTAKGLAYLH--- 574
+ E + L I E + L + + F ER K + L ++H
Sbjct: 98 YASFIED-NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR 156
Query: 575 --H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
H K+ D GL + S ++ + GT YM+PE
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGR--FFSSKTTAAHSLVGTPYYMSPERIHENGYN 214
Query: 622 AKVDVYSYGVVILEM 636
K D++S G ++ EM
Sbjct: 215 FKSDIWSLGCLLYEM 229
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 81.9 bits (202), Expect = 8e-17
Identities = 32/252 (12%), Positives = 66/252 (26%), Gaps = 42/252 (16%)
Query: 430 LFRRQDVPSSLEEGYQALSSQFRRFS-YAELKKSTKSF--KEELGRGGSGAVYKGV---- 482
L P S + E + +K LG G VY+
Sbjct: 30 LLSGLSKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDL 89
Query: 483 --LADGRAVAVKRLGDLHQGE-EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539
+ + +K + E + + + ++ + +L+ E
Sbjct: 90 NDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELY 149
Query: 540 EKQSLDKHLFSSYFLGWK-----ERFKVALGTAKGLAYLH-----HDEFEP--------- 580
+L + K A+ + +H H + +P
Sbjct: 150 SYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGF 209
Query: 581 -------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVY 627
+ D G + + + F+ T G+ E SN P ++D +
Sbjct: 210 LEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYF 269
Query: 628 SYGVVILEMVKG 639
+ M+ G
Sbjct: 270 GVAATVYCMLFG 281
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 81.3 bits (201), Expect = 9e-17
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 25/192 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGE--EVFWAEVSTIGKIYHMNLVRMWG 524
++G G +G V GR VAVK + DL + + E+ + EV + H N+V M+
Sbjct: 51 VKIGEGSTGIVCLAREKHSGRQVAVKMM-DLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H---- 575
G ++ E+++ +L + S L ++ V + LAYLH H
Sbjct: 110 SYLVGEELWVLMEFLQGGALT-DIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK 168
Query: 576 -------DEFEPKIADFGL-AKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVY 627
+ K++DFG A++S+ GT +MAPE S +VD++
Sbjct: 169 SDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLV---GTPYWMAPEVISRSLYATEVDIW 225
Query: 628 SYGVVILEMVKG 639
S G++++EMV G
Sbjct: 226 SLGIMVIEMVDG 237
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 9e-17
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 25/192 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGE--EVFWAEVSTIGKIYHMNLVRMWG 524
E++G+G SG VY + +A G+ VA++++ +L Q E+ E+ + + + N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H---- 575
G ++ EY+ SL + + + + V + L +LH H
Sbjct: 85 SYLVGDELWVVMEYLAGGSLT-DVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 576 -------DEFEPKIADFGL-AKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVY 627
+ K+ DFG A+++ S S GT +MAPE + KVD++
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVTRKAYGPKVDIW 200
Query: 628 SYGVVILEMVKG 639
S G++ +EM++G
Sbjct: 201 SLGIMAIEMIEG 212
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 1e-16
Identities = 52/228 (22%), Positives = 85/228 (37%), Gaps = 53/228 (23%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR--------AVAVKRLGDLHQGEEV--FWAE 507
E + + + LG G G V VAVK L D +++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 508 VSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL----------------FS 550
+ + I H N++ + G C++ +I EY K +L ++L
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 551 SYFLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRG 594
+ +K+ A+G+ YL H D KIADFGLA+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 595 SNSSQFSQIRGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ T G +MAPE + T + DV+S+GV++ E+
Sbjct: 211 DY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 1e-16
Identities = 53/224 (23%), Positives = 88/224 (39%), Gaps = 49/224 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR------AVAVKRLGDLHQGEEV-FWAEVST 510
+K+ K ELG G G V+ + VAVK L D F E
Sbjct: 11 HIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAEL 70
Query: 511 IGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL----------------FSSYFL 554
+ + H ++V+ +G C +G ++++EY++ L+K L + L
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 555 GWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSS 598
G + +A A G+ YL H D KI DFG++ R S+
Sbjct: 131 GLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS----RDVYST 186
Query: 599 QFSQIRGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ ++ G +M PE T + DV+S+GV++ E+
Sbjct: 187 DYYRVGG-HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 229
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 2e-16
Identities = 57/228 (25%), Positives = 83/228 (36%), Gaps = 53/228 (23%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRA------VAVKRLGDLHQGEEV--FWAEVS 509
E ++ SF + LG G G V + VAVK L E +E+
Sbjct: 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 78
Query: 510 TIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS----------------- 551
+ + HMN+V + G C+ G L+I EY L L
Sbjct: 79 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138
Query: 552 -YFLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRG 594
L ++ + AKG+A+L H D KI DFGLA+ +
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 595 SNSSQFSQIRGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEMV 637
SN + +MAPE N T + DV+SYG+ + E+
Sbjct: 199 SN-----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 2e-16
Identities = 47/211 (22%), Positives = 75/211 (35%), Gaps = 42/211 (19%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
F ++LG GG V L DG A+KR+ + EE E H N++R+
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQ-READMHRLFNHPNILRL 91
Query: 523 WGFCSEGRHR----LLIYEYVEKQSLDKHLFSSYFLGWKERF------KVALGTAKGLAY 572
+C R L+ + ++ +L + + LG +GL
Sbjct: 92 VAYCLRERGAKHEAWLLLPFFKRGTLWNEI--ERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 573 LH----------------HDEFEPKIADFGLAKLSQRGSNSSQFSQI-------RGTKGY 609
+H DE +P + D G + S+ + R T Y
Sbjct: 150 IHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 610 MAPE---WASNLPITAKVDVYSYGVVILEMV 637
APE S+ I + DV+S G V+ M+
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 80.5 bits (199), Expect = 3e-16
Identities = 52/228 (22%), Positives = 86/228 (37%), Gaps = 53/228 (23%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD--------GRAVAVKRLGDLHQGEEV--FWAE 507
EL + + LG G G V VAVK L +++ +E
Sbjct: 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 124
Query: 508 VSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGT 566
+ + I H N++ + G C++ +I EY K +L ++L + G + + +
Sbjct: 125 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 184
Query: 567 ----------------AKGLAYL------HHD----------EFEPKIADFGLAKLSQRG 594
A+G+ YL H D + KIADFGLA+
Sbjct: 185 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 244
Query: 595 SNSSQFSQIRGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ T G +MAPE + T + DV+S+GV++ E+
Sbjct: 245 DY-----YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 287
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 4e-16
Identities = 51/228 (22%), Positives = 86/228 (37%), Gaps = 53/228 (23%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR--------AVAVKRLGDLHQGEEV--FWAE 507
E + + + LG G G V VAVK L D +++ +E
Sbjct: 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136
Query: 508 VSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS--------------- 551
+ + I H N++ + G C++ +I EY K +L ++L +
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 552 -YFLGWKERFKVALGTAKGLAYL------H----------HDEFEPKIADFGLAKLSQRG 594
+ +K+ A+G+ YL H + KIADFGLA+
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 595 SNSSQFSQIRGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ T G +MAPE + T + DV+S+GV++ E+
Sbjct: 257 DY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 299
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 6e-16
Identities = 52/233 (22%), Positives = 91/233 (39%), Gaps = 58/233 (24%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR------AVAVKRLGDLHQGEEV--FWAEVS 509
E + + LG G G V K + VAVK L + E+ +E +
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS------------------ 551
+ ++ H ++++++G CS+ LLI EY + SL L S
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 552 ------YFLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAK 589
L + A ++G+ YL H D + KI+DFGL++
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 590 LSQRGSNSSQFSQIRGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ ++ ++G +MA E + T + DV+S+GV++ E+V
Sbjct: 199 DVYEEDS-----YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 6e-16
Identities = 49/219 (22%), Positives = 86/219 (39%), Gaps = 44/219 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR----AVAVKRL-GDLHQGEEV--FWAEVST 510
+ ++ + LG G G+V +G L VAVK + D E+ F +E +
Sbjct: 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAAC 89
Query: 511 IGKIYHMNLVRMWGFCSEGR-----HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKV--- 562
+ H N++R+ G C E ++I +++ L +L S + +
Sbjct: 90 MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL 149
Query: 563 ---ALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
+ A G+ YL H D + +ADFGL+K G Q
Sbjct: 150 LKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQ---- 205
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEMV 637
G ++A E ++ T+K DV+++GV + E+
Sbjct: 206 -GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 243
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 78.3 bits (193), Expect = 7e-16
Identities = 47/211 (22%), Positives = 80/211 (37%), Gaps = 39/211 (18%)
Query: 465 SFKEELGRGGSGAVYKGV-LADGRAVAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLVR 521
+ LG+G + V++G G A+K + +V E + K+ H N+V+
Sbjct: 12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 522 MWGF--CSEGRHRLLIYEYVEKQSLDKHLF---SSYFLGWKERFKVALGTAKGLAYLH-- 574
++ + RH++LI E+ SL L ++Y L E V G+ +L
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 575 ---H---------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE--- 613
H + K+ DFG A+ + + QF + GT+ Y+ P+
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE---DDEQFVSLYGTEEYLHPDMYE 188
Query: 614 -----WASNLPITAKVDVYSYGVVILEMVKG 639
A VD++S GV G
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 8e-16
Identities = 44/220 (20%), Positives = 83/220 (37%), Gaps = 45/220 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADG----RAVAVKRLGDLHQGE---EVFWAEVST 510
+ + + LG+G G+V + L VAVK L E F E +
Sbjct: 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAAC 78
Query: 511 IGKIYHMNLVRMWGFCSEGRHR------LLIYEYVEKQSLDKHLFSS------YFLGWKE 558
+ + H ++ ++ G R + ++I +++ L L +S + L +
Sbjct: 79 MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQT 138
Query: 559 RFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQ 602
+ + A G+ YL H D + +ADFGL++ G Q
Sbjct: 139 LVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQ--- 195
Query: 603 IRGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEMV 637
G ++A E ++ T DV+++GV + E++
Sbjct: 196 --GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 1e-15
Identities = 53/227 (23%), Positives = 88/227 (38%), Gaps = 52/227 (22%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD------GRAVAVKRLGDLHQGEEV--FWAEVS 509
E + + LGRG G V + R VAVK L + E +E+
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 82
Query: 510 TIGKI-YHMNLVRMWGFCS-EGRHRLLIYEYVEKQSLDKHL----------------FSS 551
+ I +H+N+V + G C+ G ++I E+ + +L +L
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 552 YFLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGS 595
FL + + AKG+ +L H D + KI DFGLA+ +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 202
Query: 596 NSSQFSQIRGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ +R +MAPE + T + DV+S+GV++ E+
Sbjct: 203 D-----YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 2e-15
Identities = 57/202 (28%), Positives = 74/202 (36%), Gaps = 37/202 (18%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIY-HMNLVRM 522
LG G G V+K DGR AVKR +G AEV + K+ H VR+
Sbjct: 63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRL 122
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF------KVALGTAKGLAYLH-- 574
EG L E SL +H W T LA+LH
Sbjct: 123 EQAWEEGGILYLQTELCG-PSLQQHC-----EAWGASLPEAQVWGYLRDTLLALAHLHSQ 176
Query: 575 ---HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPI 620
H + +P K+ DFGL + G+ + Q G YMAPE
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGLLV--ELGTAGAGEVQE-GDPRYMAPELLQG-SY 232
Query: 621 TAKVDVYSYGVVILEMVKGIRL 642
DV+S G+ ILE+ + L
Sbjct: 233 GTAADVFSLGLTILEVACNMEL 254
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 2e-15
Identities = 53/233 (22%), Positives = 88/233 (37%), Gaps = 58/233 (24%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGR------AVAVKRLGDLHQGEEV--FWAEVS 509
E ++ + ++G G G V++ VAVK L + + F E +
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS------------------ 551
+ + + N+V++ G C+ G+ L++EY+ L++ L S
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 552 ------YFLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAK 589
L E+ +A A G+AYL H D KIADFGL+
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS- 221
Query: 590 LSQRGSNSSQFSQIRGTKGY-----MAPEWASNLPITAKVDVYSYGVVILEMV 637
R S+ + + M PE T + DV++YGVV+ E+
Sbjct: 222 ---RNIYSADYYK-ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 2e-15
Identities = 45/225 (20%), Positives = 72/225 (32%), Gaps = 57/225 (25%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIY-HMNLVRM 522
E++G G G+V+K V DG A+KR G E+ EV + H ++VR
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76
Query: 523 WGFCSEGRHRLLIY-EYVEKQSLDKHLFSSYFLGWKERF------KVALGTAKGLAYLH- 574
+ +LI EY SL + S F + L +GL Y+H
Sbjct: 77 FS-AWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGRGLRYIHS 133
Query: 575 ----H------------------------------DEFEPKIADFGLAKLSQRGSNSSQF 600
H ++ KI D G + S +
Sbjct: 134 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT--RISSPQVE- 190
Query: 601 SQIRGTKGYMAPE-WASNLPITAKVDVYSYGVVILEMVKGIRLSN 644
G ++A E N K D+++ + ++ L
Sbjct: 191 ---EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR 232
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 2e-15
Identities = 54/233 (23%), Positives = 80/233 (34%), Gaps = 58/233 (24%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRA------VAVKRLGDLHQGEEV--FWAEVS 509
E + F + LG G G V VAVK L + E +E+
Sbjct: 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 510 TIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL-------------------- 548
+ ++ H N+V + G C+ LI+EY L +L
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 549 ---FSSYFLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAK 589
L +++ A AKG+ +L H D KI DFGLA+
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLAR 220
Query: 590 LSQRGSNSSQFSQIRGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEMV 637
SN + +MAPE T K DV+SYG+++ E+
Sbjct: 221 DIMSDSN-----YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 77.4 bits (190), Expect = 3e-15
Identities = 23/246 (9%), Positives = 48/246 (19%), Gaps = 60/246 (24%)
Query: 449 SQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVK----RLGDLHQGEEV 503
++ S + E L G V+ + A+K + E
Sbjct: 49 AETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELER 108
Query: 504 FWAEVSTIGKIYHMNLVRMWGFCSEGR--------------------------HRLLIYE 537
++ + + LL+
Sbjct: 109 LHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMP 168
Query: 538 YVE------KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH---------------- 575
+LD G + + A L
Sbjct: 169 AASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM 228
Query: 576 DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW--ASNLPITAKVDVYSYGVVI 633
+ + D ++ Y E+ AS T ++ + G+ I
Sbjct: 229 PDGRLMLGDVSALW-----KVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSI 283
Query: 634 LEMVKG 639
+
Sbjct: 284 YRVWCL 289
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 78.6 bits (193), Expect = 3e-15
Identities = 57/209 (27%), Positives = 79/209 (37%), Gaps = 38/209 (18%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLG-DLHQGEEVFWA-EVSTIGKIYHMNLVRM 522
KE LG GG G V + + G VA+K+ +L W E+ + K+ H N+V
Sbjct: 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77
Query: 523 ------WGFCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGT----AKGLA 571
+ LL EY E L K+L G KE + L
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE--GPIRTLLSDISSALR 135
Query: 572 YLH-----HDEFEP--------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
YLH H + +P KI D G AK +G ++ GT Y+AP
Sbjct: 136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAP 192
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGIR 641
E T VD +S+G + E + G R
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFR 221
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 77.2 bits (190), Expect = 3e-15
Identities = 47/211 (22%), Positives = 80/211 (37%), Gaps = 39/211 (18%)
Query: 465 SFKEELGRGGSGAVYKGV-LADGRAVAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLVR 521
+ LG+G + V++G G A+K + +V E + K+ H N+V+
Sbjct: 12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 522 MWGF--CSEGRHRLLIYEYVEKQSLDKHLF---SSYFLGWKERFKVALGTAKGLAYLH-- 574
++ + RH++LI E+ SL L ++Y L E V G+ +L
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 575 ---H---------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE--- 613
H + K+ DFG A+ + + QF + GT+ Y+ P+
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE---DDEQFVSLYGTEEYLHPDMYE 188
Query: 614 -----WASNLPITAKVDVYSYGVVILEMVKG 639
A VD++S GV G
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 5e-15
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 23/191 (12%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFC 526
E+LG G G+VYK + G+ VA+K++ + + E+S + + ++V+ +G
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQV-PVESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 527 SEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H----- 575
+ ++ EY S+ D + L E + T KGL YLH H
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKA 153
Query: 576 ------DEFEPKIADFGL-AKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
E K+ADFG+ +L+ + + GT +MAPE + D++S
Sbjct: 154 GNILLNTEGHAKLADFGVAGQLTDTMAKRNTVI---GTPFWMAPEVIQEIGYNCVADIWS 210
Query: 629 YGVVILEMVKG 639
G+ +EM +G
Sbjct: 211 LGITAIEMAEG 221
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 6e-15
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
E++G+G G V+KG+ + VA+K + DL + E E E++ + + + + +
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H--- 575
G + +I EY+ S L L + + KGL YLH H
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDI 145
Query: 576 --------DEFEPKIADFGL-AKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
+ E K+ADFG+ +L+ + F GT +MAPE +K D+
Sbjct: 146 KAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV---GTPFWMAPEVIKQSAYDSKADI 202
Query: 627 YSYGVVILEMVKG 639
+S G+ +E+ +G
Sbjct: 203 WSLGITAIELARG 215
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 7e-15
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 36/198 (18%)
Query: 468 EELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVF---WAEVSTIGKIYHMNLVRMW 523
ELG G G V+K G +A K + L + E+ + + +V +
Sbjct: 39 SELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQIIRELQVLHECNSPYIVGFY 97
Query: 524 G-FCSEGRHRLLIY-EYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLHHDEF- 578
G F S+G + I E+++ SLD+ E+ KV++ KGL YL
Sbjct: 98 GAFYSDGE--ISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 153
Query: 579 ----------------EPKIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
E K+ DFG++ +L +NS GT+ YM+PE +
Sbjct: 154 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----GTRSYMSPERLQGTHYS 208
Query: 622 AKVDVYSYGVVILEMVKG 639
+ D++S G+ ++EM G
Sbjct: 209 VQSDIWSMGLSLVEMAVG 226
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 1e-14
Identities = 45/204 (22%), Positives = 74/204 (36%), Gaps = 39/204 (19%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVK--RLGDLHQGE-EVFWAEVSTIGKIYHMNLVRMW 523
+G G G K +DG+ + K G + + E ++ +EV+ + ++ H N+VR +
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 524 G-FCSEGRHRLLIY-EYVEKQSLDKHL-----FSSYFLGWKERF--KVALGTAKGLAYLH 574
L I EY E L + Y E F +V L H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL---DEEFVLRVMTQLTLALKECH 128
Query: 575 HDEFEP---------------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE 613
K+ DFGLA+ ++S GT YM+PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKTFVGTPYYMSPE 186
Query: 614 WASNLPITAKVDVYSYGVVILEMV 637
+ + K D++S G ++ E+
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYELC 210
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 74.9 bits (184), Expect = 2e-14
Identities = 33/205 (16%), Positives = 62/205 (30%), Gaps = 35/205 (17%)
Query: 468 EELGRGGS--GAVYKGV-LADGRAVAVKRLGDLHQGE----EVFWAEVSTIGKIYHMNLV 520
+G+G V G V V+R+ +L E+ H N+V
Sbjct: 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRI-NLEACSNEMVTFLQGELHVSKLFNHPNIV 89
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL---GTAKGLAYLHH-- 575
++ ++ S K L ++F+ +A G K L Y+HH
Sbjct: 90 PYRATFIADNELWVVTSFMAYGSA-KDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG 148
Query: 576 --------------DEFEPKIADFGLA-----KLSQRGSNSSQFSQIRGTKGYMAPE--W 614
+ + ++ ++ +++PE
Sbjct: 149 YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQ 208
Query: 615 ASNLPITAKVDVYSYGVVILEMVKG 639
+ AK D+YS G+ E+ G
Sbjct: 209 QNLQGYDAKSDIYSVGITACELANG 233
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 3e-14
Identities = 48/225 (21%), Positives = 84/225 (37%), Gaps = 37/225 (16%)
Query: 437 PSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVK--- 492
P S+ + A F + S A K + LG+G G V G+ AVK
Sbjct: 2 PGSMMDHLHATPGMFVQHSTAIFSDRYK-GQRVLGKGSFGEVILCKDKITGQECAVKVIS 60
Query: 493 --RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL-DKHLF 549
++ E + EV + ++ H N+++++ F + + L+ E L D+ +
Sbjct: 61 KRQVKQKTDKESLL-REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS 119
Query: 550 SSYFLGWKER--FKVALGTAKGLAYLH-------------------HDEFEPKIADFGLA 588
F E ++ G+ Y+H + +I DFGL+
Sbjct: 120 RKRF---SEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Query: 589 KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVI 633
+ + GT Y+APE + K DV+S GV++
Sbjct: 177 THFEAS---KKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVIL 217
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 4e-14
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 27/192 (14%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG+G G VY +A+K +L ++ EV + H N++R++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 75
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G+ + LI EY ++ + L + A L+Y H H +
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 135
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVY 627
+P KIADFG + + SS+ + + GT Y+ PE KVD++
Sbjct: 136 KPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLW 191
Query: 628 SYGVVILEMVKG 639
S GV+ E + G
Sbjct: 192 SLGVLCYEFLVG 203
|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 | Back alignment and structure |
|---|
Score = 70.7 bits (172), Expect = 8e-14
Identities = 36/241 (14%), Positives = 67/241 (27%), Gaps = 53/241 (21%)
Query: 18 SIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGADRA 77
+I F S + + T + + + R +++ + +VL D D +W +NT RA
Sbjct: 2 NILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFD-SDVRVWASNTAGATGCRA 60
Query: 78 ELLDTGNLVLKDRHGKILWQS-------------------------------------FD 100
L G LV+ I W S
Sbjct: 61 VLQSDGLLVILTAQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYGPGLWDSGTSNKGSVVV 120
Query: 101 YPTDTLLPNQVFRKSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPD 160
+ + + + L + D L L D D
Sbjct: 121 ANNGNSILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLF------------DRD 168
Query: 161 FDVFQNGRTKYNSSRIAVLDDFGSF---SSSDELKFSAIDMGFGIKRRLTMDYDGNLRLY 217
V+ + AVL G ++ + +++ + + + D NL +Y
Sbjct: 169 DRVWSTNTAGKGTGCRAVLQPNGRMDVLTNQNIAVWTSGNSRSAGRYVFVLQPDRNLAIY 228
Query: 218 S 218
Sbjct: 229 G 229
|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 | Back alignment and structure |
|---|
Score = 47.6 bits (112), Expect = 4e-06
Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Query: 17 FSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGAD- 75
SI ++ + T + + + R S+ + +VL D D +W TNT G
Sbjct: 125 NSILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFD-RDDRVWSTNTAGKGTGC 183
Query: 76 RAELLDTGNLVLKDRHGKILWQSFDYPTD 104
RA L G + + +W S + +
Sbjct: 184 RAVLQPNGRMDVLTNQNIAVWTSGNSRSA 212
|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 5e-05
Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 6/80 (7%)
Query: 20 WFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGAD-RAE 78
VW+ N G G RA L+ NG M + + +W + + +
Sbjct: 161 NLVLFDRDDRVWSTNTAGK--GTGCRAVLQPNGRMDVLTNQNIAVWTSGNSRSAGRYVFV 218
Query: 79 LLDTGNLVLKDRHGKILWQS 98
L NL + +G LW +
Sbjct: 219 LQPDRNLAI---YGGALWTT 235
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 72.3 bits (177), Expect = 1e-13
Identities = 36/256 (14%), Positives = 65/256 (25%), Gaps = 71/256 (27%)
Query: 449 SQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQ 499
FR S + T LG+ A + G + V + Q
Sbjct: 60 QPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQ 119
Query: 500 GEE-----------------------VFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536
+E +F ++ + M VR+ R +Y
Sbjct: 120 MKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLY 179
Query: 537 EYVEK------QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH--------------- 575
++ + L H + L R ++ L + LA LHH
Sbjct: 180 PRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL 239
Query: 576 -DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS-----------NLPITAK 623
+ F ++G+ PE + +T
Sbjct: 240 DQRGGVFLTGFEHLVRDGA------RVVSSVSRGFEPPELEARRATISYHRDRRTLMTFS 293
Query: 624 VDVYSYGVVILEMVKG 639
D ++ G+VI +
Sbjct: 294 FDAWALGLVIYWIWCA 309
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 71.7 bits (176), Expect = 2e-13
Identities = 49/198 (24%), Positives = 76/198 (38%), Gaps = 34/198 (17%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGE-----EVFWAEVSTIGKIYHMNLVR 521
E+G G GAVY + + VA+K++ + + EV + K+ H N ++
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKM-SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 118
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H- 575
G L+ EY + D L E V G +GLAYLH H
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 576 ----------DEFEPKIADFGL-AKLSQRGSNSSQFSQIRGTKGYMAPEWASNL---PIT 621
+ K+ DFG + ++ S GT +MAPE +
Sbjct: 179 DVKAGNILLSEPGLVKLGDFGSASIMAPANS-------FVGTPYWMAPEVILAMDEGQYD 231
Query: 622 AKVDVYSYGVVILEMVKG 639
KVDV+S G+ +E+ +
Sbjct: 232 GKVDVWSLGITCIELAER 249
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 72.0 bits (176), Expect = 2e-13
Identities = 26/236 (11%), Positives = 53/236 (22%), Gaps = 70/236 (29%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAE------------------- 507
LG+ A + G + V + +
Sbjct: 84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQ 143
Query: 508 -------VSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK-----------QSLDKHLF 549
+ + +M + R ++ + + L H
Sbjct: 144 AKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSS 203
Query: 550 SSYFLGWKERFKVALGTAKGLAYLHH----------------DEFEPKIADFGLAKLSQR 593
+ L R ++ L + LA LHH + F
Sbjct: 204 THKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA 263
Query: 594 GSNSSQFSQIRGTKGYMAPEWAS----------NLPITAKVDVYSYGVVILEMVKG 639
+ S +G+ PE + +T D ++ G+ I +
Sbjct: 264 SAVS------PIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA 313
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 2e-13
Identities = 41/195 (21%), Positives = 71/195 (36%), Gaps = 33/195 (16%)
Query: 465 SFKEELGRGGSGAVYKGV-LADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLV 520
++LG G G V A+K + EV+ + + H N++
Sbjct: 40 QRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIM 99
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKER--FKVALGTAKGLAYLH--- 574
+++ F + R+ L+ E + L D+ + F E + G+ YLH
Sbjct: 100 KLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKF---NEVDAAVIIKQVLSGVTYLHKHN 156
Query: 575 ----------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
+ KI DFGL+ + + + + GT Y+APE
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK---KMKERLGTAYYIAPE-VLRK 212
Query: 619 PITAKVDVYSYGVVI 633
K DV+S GV++
Sbjct: 213 KYDEKCDVWSIGVIL 227
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 2e-13
Identities = 42/206 (20%), Positives = 74/206 (35%), Gaps = 52/206 (25%)
Query: 465 SFKEELGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWAEVSTIGKIYHMN 518
EELG G G V++ V A GR K D + E+S + +++H
Sbjct: 54 DILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD----KYTVKNEISIMNQLHHPK 109
Query: 519 LVRMWGFCSEGRHRLLIYEYV------EKQSLDKHLFSSYFLGWKERFKVALGTAK---- 568
L+ + + +LI E++ ++ + + + S E + +
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMS-------EA--EVINYMRQACE 160
Query: 569 GLAYLH-----H-------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYM 610
GL ++H H KI DFGLA + + T +
Sbjct: 161 GLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLAT---KLNPDEIVKVTTATAEFA 217
Query: 611 APEWASNLPITAKVDVYSYGVV--IL 634
APE P+ D+++ GV+ +L
Sbjct: 218 APEIVDREPVGFYTDMWAIGVLGYVL 243
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 4e-13
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 42/206 (20%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVF---WAEVSTIGK-IYHMNLVRM 522
E+GRG G+V K V G+ +AVKR+ E+ ++ + + +V+
Sbjct: 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRI-RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 523 WG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF------KVALGTAKGLAYLHH 575
+G EG + + E + S DK + + + K+ L T K L +L
Sbjct: 87 YGALFREGDCWICM-ELMST-SFDK-FYKYVYSVLDDVIPEEILGKITLATVKALNHLKE 143
Query: 576 D-----------------EFEPKIADFGL-AKLSQRGSNSSQFSQIRGTKGYMAPE---- 613
+ K+ DFG+ +L +S ++ G + YMAPE
Sbjct: 144 NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV----DSIAKTRDAGCRPYMAPERIDP 199
Query: 614 WASNLPITAKVDVYSYGVVILEMVKG 639
AS + DV+S G+ + E+ G
Sbjct: 200 SASRQGYDVRSDVWSLGITLYELATG 225
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 4e-13
Identities = 47/215 (21%), Positives = 79/215 (36%), Gaps = 55/215 (25%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
E +G G + V VA+KR+ +L + + + E+ + + +H N+V +
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHPNIVSYY 79
Query: 524 G-------------FCSEGRHRLLIYEYVEKQSLDKHLFS----SYFLGWKERFKVALGT 566
S G +I V K + + L +E
Sbjct: 80 TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL--RE-------V 130
Query: 567 AKGLAYLH-----H-----------DEFEPKIADFGL-AKLSQRGSNSSQFSQIR----G 605
+GL YLH H ++ +IADFG+ A L+ G + R G
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV--RKTFVG 188
Query: 606 TKGYMAPE-WASNLPITAKVDVYSYGVVILEMVKG 639
T +MAPE K D++S+G+ +E+ G
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 5e-13
Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 46/201 (22%)
Query: 467 KEELGRGGSGAVYKGV-LADGRAVAVKRL-GDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
E LG G G V+K A G +A K + + +E E+S + ++ H NL++++
Sbjct: 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 525 FCSEGRHRLLIYEYVEKQSL------DKHLFSSYFLGWKER-----FKVALGTAKGLAYL 573
+L+ EYV+ L + + + E K G+ ++
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLT-------ELDTILFMKQICE---GIRHM 203
Query: 574 H------------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
H D + KI DFGLA+ R + GT ++APE
Sbjct: 204 HQMYILHLDLKPENILCVNRDAKQIKIIDFGLAR---RYKPREKLKVNFGTPEFLAPEVV 260
Query: 616 SNLPITAKVDVYSYGVV--IL 634
+ ++ D++S GV+ +L
Sbjct: 261 NYDFVSFPTDMWSVGVIAYML 281
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 6e-13
Identities = 44/210 (20%), Positives = 74/210 (35%), Gaps = 51/210 (24%)
Query: 465 SFKEELGRGGSGAVYKGV-LADGRAVAVKRL--------------GDLHQGEEVFWAEVS 509
+LG G G V A+K + ++ + E + E+S
Sbjct: 39 FKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEIS 98
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKER-----FKVA 563
+ + H N+++++ + ++ L+ E+ E L ++ + F E K
Sbjct: 99 LLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF---DECDAANIMKQI 155
Query: 564 LGTAKGLAYLH-----H--------------DEFEPKIADFGLAKLSQRGSNSSQFSQIR 604
L G+ YLH H KI DFGL+ + +
Sbjct: 156 LS---GICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY---KLRDRL 209
Query: 605 GTKGYMAPEWASNLPITAKVDVYSYGVVIL 634
GT Y+APE K DV+S G VI+
Sbjct: 210 GTAYYIAPE-VLKKKYNEKCDVWSCG-VIM 237
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 7e-13
Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 32/199 (16%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVRMWG 524
ELG G G VYK G A K + + EE+ + E+ + H +V++ G
Sbjct: 25 GELGDGAFGKVYKAKNKETGALAAAKVI-ETKSEEELEDYIVEIEILATCDHPYIVKLLG 83
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----H-- 575
++ E+ ++D + G E V + L +LH H
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDA-IMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRD 142
Query: 576 ---------DEFEPKIADFGL-AKLSQRGSNSSQFSQIRGTKGYMAPE-----WASNLPI 620
E + ++ADFG+ AK + F GT +MAPE + P
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWMAPEVVMCETMKDTPY 199
Query: 621 TAKVDVYSYGVVILEMVKG 639
K D++S G+ ++EM +
Sbjct: 200 DYKADIWSLGITLIEMAQI 218
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 7e-13
Identities = 42/211 (19%), Positives = 70/211 (33%), Gaps = 54/211 (25%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVK------RLGDLHQGEEVFWAEVSTIGKIYHMN 518
E +G+G V + + G+ AVK E E S + H +
Sbjct: 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 519 LVRMWGFCSEGRHRLLIYEYVE---------KQSLDKHLFSSYFLGWKER-----FKVAL 564
+V + S +++E+++ K++ ++S E + L
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYS-------EAVASHYMRQIL 140
Query: 565 GTAKGLAYLH-----H-------------DEFEP-KIADFGLAKLSQRGSNSSQFSQIRG 605
+ L Y H H + P K+ FG+A + G
Sbjct: 141 ---EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE--SGLVAGGRVG 195
Query: 606 TKGYMAPEWASNLPITAKVDVYSYGVV--IL 634
T +MAPE P VDV+ GV+ IL
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFIL 226
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 1e-12
Identities = 51/206 (24%), Positives = 71/206 (34%), Gaps = 45/206 (21%)
Query: 465 SFKEELGRGGSGAVYKGV-LADGRAVAVK-------RLGDLHQGEEVFWAEVSTIGKIYH 516
EELG G V K + G A K R E EVS + ++ H
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLH 74
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKER-----FKVALGTAKGL 570
N++ + +LI E V L D E K L G+
Sbjct: 75 PNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESL---SEEEATSFIKQILD---GV 128
Query: 571 AYLH-----H---------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYM 610
YLH H K+ DFGLA + +F I GT ++
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFGTPEFV 185
Query: 611 APEWASNLPITAKVDVYSYGVV--IL 634
APE + P+ + D++S GV+ IL
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYIL 211
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 68.7 bits (168), Expect = 1e-12
Identities = 42/236 (17%), Positives = 76/236 (32%), Gaps = 69/236 (29%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGE-EVFWAEVSTIGKIYHMN 518
K +G+G G V + A+K ++ ++ + E EV + K++H N
Sbjct: 30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPN 89
Query: 519 LVRMWGFCSEGRHRLLIYEYVEKQSL------DKHLFSSYFLGWKERFKVALGTAK---- 568
+ R++ + ++ L+ E L + + ++
Sbjct: 90 IARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149
Query: 569 ------------------------------GLAYLH-----H-------------DEFEP 580
L YLH H FE
Sbjct: 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEI 209
Query: 581 KIADFGLAKLSQRGSNSSQF--SQIRGTKGYMAPE--WASNLPITAKVDVYSYGVV 632
K+ DFGL+K + +N + + GT ++APE +N K D +S GV+
Sbjct: 210 KLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 1e-12
Identities = 45/198 (22%), Positives = 75/198 (37%), Gaps = 39/198 (19%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG+G G VY + +A+K +L ++ E+ + H N++RM+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR-REIEIQSHLRHPNILRMY 80
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLH-----HDE 577
+ + + L+ E+ + L K L F + + A L Y H H +
Sbjct: 81 NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE-LADALHYCHERKVIHRD 139
Query: 578 FEP-----------KIADFGLAKLSQRGSNSSQFSQIR-----GTKGYMAPEWASNLPIT 621
+P KIADFG + + +R GT Y+ PE
Sbjct: 140 IKPENLLMGYKGELKIADFGWSVHAP---------SLRRRTMCGTLDYLPPEMIEGKTHD 190
Query: 622 AKVDVYSYGVVILEMVKG 639
KVD++ GV+ E + G
Sbjct: 191 EKVDLWCAGVLCYEFLVG 208
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 68.4 bits (167), Expect = 1e-12
Identities = 28/162 (17%), Positives = 53/162 (32%), Gaps = 29/162 (17%)
Query: 504 FWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVA 563
++ + N V S + + + K++L + L +E
Sbjct: 108 PSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCL 167
Query: 564 ---LGTAKGLAYLH----------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIR 604
+ A+ + +LH + K+ DFGL +
Sbjct: 168 HIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 227
Query: 605 ----------GTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
GTK YM+PE + KVD++S G+++ E+
Sbjct: 228 PAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 6e-04
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKR--LGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ +GRGG G V++ D A+KR L + E EV + K+ H +VR +
Sbjct: 12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 71
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSS 551
E E E D+
Sbjct: 72 AWLETPPEKWQEEMDEIWLKDESTDWP 98
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 2e-12
Identities = 44/211 (20%), Positives = 78/211 (36%), Gaps = 51/211 (24%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVK----------RLGDLHQGEEVFWAEVSTIGKI 514
KE LGRG S V + + + AVK ++ + E EV + K+
Sbjct: 21 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 80
Query: 515 -YHMNLVRMWGFCSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKER-----FKVALGTA 567
H N++++ L+++ ++K L D E+ + L
Sbjct: 81 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL---SEKETRKIMRALL--- 134
Query: 568 KGLAYLH-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+ + LH H D+ K+ DFG + G + ++ GT Y+A
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG---EKLREVCGTPSYLA 191
Query: 612 PE------WASNLPITAKVDVYSYGVV--IL 634
PE ++ +VD++S GV+ L
Sbjct: 192 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 222
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 2e-12
Identities = 42/217 (19%), Positives = 73/217 (33%), Gaps = 54/217 (24%)
Query: 470 LGRGGSGAVYKGVLA--DGRAVAVKRL--GDLHQGEEVFWA----------------EVS 509
L +G + L D + A+K+ L + + + E+
Sbjct: 39 LNQGKFNKII---LCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQ 95
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAK- 568
I I + + G + +IYEY+E S+ K + L + + K
Sbjct: 96 IITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKC 155
Query: 569 -------GLAYLH------H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIR 604
+Y+H H K++DFG ++ + R
Sbjct: 156 IIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMV----DKKIKGSR 211
Query: 605 GTKGYMAPEWASNLPIT--AKVDVYSYGVVILEMVKG 639
GT +M PE+ SN AKVD++S G+ + M
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYN 248
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 2e-12
Identities = 48/197 (24%), Positives = 71/197 (36%), Gaps = 34/197 (17%)
Query: 465 SFKEELGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWAEVSTIGKIYHMN 518
EELG G G V++ A G A K D +E E+ T+ + H
Sbjct: 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD----KETVRKEIQTMSVLRHPT 215
Query: 519 LVRMWGFCSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKERFKVALGTAKGLAYLH--- 574
LV + + ++IYE++ L +K + E + KGL ++H
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 575 --H-------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H E K+ DFGL GT + APE A P
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTA---HLDPKQSVKVTTGTAEFAAPEVAEGKP 332
Query: 620 ITAKVDVYSYGVV--IL 634
+ D++S GV+ IL
Sbjct: 333 VGYYTDMWSVGVLSYIL 349
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 2e-12
Identities = 51/198 (25%), Positives = 77/198 (38%), Gaps = 39/198 (19%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLG-DLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
F E LG G V+ G+ A+K + + E++ + KI H N+V +
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 524 GFCSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKER-----FKVALGTAKGLAYLH--- 574
H L+ + V L D+ L + E+ + L + YLH
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVY---TEKDASLVIQQVLS---AVKYLHENG 126
Query: 575 --H--------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
H + + I DFGL+K+ Q G S GT GY+APE +
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQK 182
Query: 619 PITAKVDVYSYGVV--IL 634
P + VD +S GV+ IL
Sbjct: 183 PYSKAVDCWSIGVITYIL 200
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 2e-12
Identities = 38/192 (19%), Positives = 76/192 (39%), Gaps = 25/192 (13%)
Query: 465 SFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
E+LGRG G V++ V + + K + + + E+S + H N++ +
Sbjct: 8 MIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLH 67
Query: 524 GFCSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDE 577
++I+E++ + ++ S++ L +E + L +LH H +
Sbjct: 68 ESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFD 127
Query: 578 FEP-------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
P KI +FG A+ + G F + Y APE + ++
Sbjct: 128 IRPENIIYQTRRSSTIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTAT 184
Query: 625 DVYSYGVV--IL 634
D++S G + +L
Sbjct: 185 DMWSLGTLVYVL 196
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 3e-12
Identities = 45/203 (22%), Positives = 73/203 (35%), Gaps = 45/203 (22%)
Query: 465 SFKEELGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWAEVSTIGKIYHMN 518
+ LG+G G V K + AVK + + EV + K+ H N
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTSTILREVELLKKLDHPN 82
Query: 519 LVRMWGFCSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKER-----FKVALGTAKGLAY 572
+++++ + ++ E L D+ + F E K G+ Y
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRF---SEHDAARIIKQVFS---GITY 136
Query: 573 LH-----H--------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE 613
+H H + + KI DFGL+ Q+ + + GT Y+APE
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPE 193
Query: 614 WASNLPITAKVDVYSYGVV--IL 634
K DV+S GV+ IL
Sbjct: 194 -VLRGTYDEKCDVWSAGVILYIL 215
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 67.5 bits (165), Expect = 3e-12
Identities = 46/220 (20%), Positives = 78/220 (35%), Gaps = 54/220 (24%)
Query: 467 KEELGRGGSGAVYKGV-LADGRAVAVKR-LGDLHQGEEVFWAEVSTIGKI-YHMNLVRMW 523
+ L GG VY+ + GR A+KR L + + EV + K+ H N+V+
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC 92
Query: 524 GFCSEGRHR--------LLIYEYVEKQSLD-------KHLFSSYFLGWKERFKVALGTAK 568
S G+ LL+ E + Q ++ + S K+ T +
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSC-----DTVLKIFYQTCR 147
Query: 569 GLAYLHH------------------DEFEPKIADFGLAKLSQRGSNSSQFSQIR------ 604
+ ++H ++ K+ DFG A + S +Q R
Sbjct: 148 AVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEE 207
Query: 605 ----GTKGYMAPE---WASNLPITAKVDVYSYGVVILEMV 637
T Y PE SN PI K D+++ G ++ +
Sbjct: 208 ITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLC 247
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 3e-12
Identities = 47/204 (23%), Positives = 76/204 (37%), Gaps = 39/204 (19%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVF---WAEVSTIGK-IYHMNLVRM 522
ELGRG G V K + G+ +AVKR+ + ++ + + V
Sbjct: 13 MELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 523 WG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLG--WKERF--KVALGTAKGLAYLHHD- 576
+G EG + + E ++ SLDK G E K+A+ K L +LH
Sbjct: 72 YGALFREGDVWICM-ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 577 ----------------EFEPKIADFGL-AKLSQRGSNSSQFSQIRGTKGYMAPE----WA 615
+ K+ DFG+ L + G K YMAPE
Sbjct: 130 SVIHRDVKPSNVLINALGQVKMCDFGISGYLV----DDVAKDIDAGCKPYMAPERINPEL 185
Query: 616 SNLPITAKVDVYSYGVVILEMVKG 639
+ + K D++S G+ ++E+
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAIL 209
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 4e-12
Identities = 51/206 (24%), Positives = 71/206 (34%), Gaps = 45/206 (21%)
Query: 465 SFKEELGRGGSGAVYKGV-LADGRAVAVK-------RLGDLHQGEEVFWAEVSTIGKIYH 516
EELG G V K + G A K R E EVS + ++ H
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKER-----FKVALGTAKGL 570
N++ + +LI E V L D E K L G+
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESL---SEEEATSFIKQILD---GV 128
Query: 571 AYLH-----H---------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYM 610
YLH H K+ DFGLA + +F I GT ++
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFGTPEFV 185
Query: 611 APEWASNLPITAKVDVYSYGVV--IL 634
APE + P+ + D++S GV+ IL
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYIL 211
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 5e-12
Identities = 55/206 (26%), Positives = 75/206 (36%), Gaps = 45/206 (21%)
Query: 465 SFKEELGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGE--EVFWAEVSTIGKIYH 516
EELG G V K + G A K R +G E EVS + +I H
Sbjct: 14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKER-----FKVALGTAKGL 570
N++ + +LI E V L D E K L G+
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL---TEEEATEFLKQILN---GV 127
Query: 571 AYLH-----H---------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYM 610
YLH H + KI DFGLA G+ +F I GT ++
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFV 184
Query: 611 APEWASNLPITAKVDVYSYGVV--IL 634
APE + P+ + D++S GV+ IL
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYIL 210
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 6e-12
Identities = 45/200 (22%), Positives = 72/200 (36%), Gaps = 41/200 (20%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL--GDLHQGE-EVFWAEVSTIGKIYHMNLVR 521
LG+G G V K + AVK + + EV + K+ H N+++
Sbjct: 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 522 MWGFCSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKER-----FKVALGTAKGLAYLH- 574
++ + ++ E L D+ + F E K G+ Y+H
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRF---SEHDAARIIKQVFS---GITYMHK 139
Query: 575 ----H--------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
H + + KI DFGL+ Q+ + + GT Y+APE
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLR 196
Query: 617 NLPITAKVDVYSYGVV--IL 634
K DV+S GV+ IL
Sbjct: 197 G-TYDEKCDVWSAGVILYIL 215
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 7e-12
Identities = 42/210 (20%), Positives = 81/210 (38%), Gaps = 50/210 (23%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL---------GDLHQGEEVFWAEVSTIGKIY 515
K+ +GRG S V + V A G AVK + L + E E + ++
Sbjct: 98 PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVA 157
Query: 516 -HMNLVRMWGFCSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKER-----FKVALGTAK 568
H +++ + L+++ + K L D E+ + L +
Sbjct: 158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVAL---SEKETRSIMRSLL---E 211
Query: 569 GLAYLH-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
+++LH H D + +++DFG + + G + ++ GT GY+AP
Sbjct: 212 AVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG---EKLRELCGTPGYLAP 268
Query: 613 E------WASNLPITAKVDVYSYGVV--IL 634
E ++ +VD+++ GV+ L
Sbjct: 269 EILKCSMDETHPGYGKEVDLWACGVILFTL 298
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 7e-12
Identities = 49/197 (24%), Positives = 80/197 (40%), Gaps = 38/197 (19%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ ELGRG + VY+ + A+K L +++ E+ + ++ H N++++
Sbjct: 57 VESELGRGATSIVYRCKQKGTQKPYALKVL-KKTVDKKIVRTEIGVLLRLSHPNIIKLKE 115
Query: 525 FCSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKER-----FKVALGTAKGLAYLH---- 574
L+ E V L D+ + Y+ ER K L +AYLH
Sbjct: 116 IFETPTEISLVLELVTGGELFDRIVEKGYY---SERDAADAVKQILE---AVAYLHENGI 169
Query: 575 -H--------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + KIADFGL+K+ + + GT GY APE
Sbjct: 170 VHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV---LMKTVCGTPGYCAPEILRGCA 226
Query: 620 ITAKVDVYSYGVV--IL 634
+VD++S G++ IL
Sbjct: 227 YGPEVDMWSVGIITYIL 243
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 9e-12
Identities = 52/200 (26%), Positives = 76/200 (38%), Gaps = 33/200 (16%)
Query: 465 SFKEELGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGE--EVFWAEVSTIGKIYH 516
EELG G V K G+ A K RL +G E EV+ + +I H
Sbjct: 8 EMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRH 67
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-- 574
N++ + +LI E V L L L E + G+ YLH
Sbjct: 68 PNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK 127
Query: 575 ---H---------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
H K+ DFG+A + G+ +F I GT ++APE +
Sbjct: 128 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVN 184
Query: 617 NLPITAKVDVYSYGVV--IL 634
P+ + D++S GV+ IL
Sbjct: 185 YEPLGLEADMWSIGVITYIL 204
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 1e-11
Identities = 49/209 (23%), Positives = 74/209 (35%), Gaps = 54/209 (25%)
Query: 465 SFKEELGRGGSGAVYKGV-LADGRAVAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLVR 521
FK +LG G G V+ + G +K + E AE+ + + H N+++
Sbjct: 25 IFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIK 84
Query: 522 MWGFCSEGRHRLLIYEY----------VEKQSLDKHLFSSYFLGWKER-----FKVALGT 566
++ + + ++ E V Q+ K S E K +
Sbjct: 85 IFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKA-LS-------EGYVAELMKQMMN- 135
Query: 567 AKGLAYLH-----H--------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK 607
LAY H H KI DFGLA+L + + GT
Sbjct: 136 --ALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE---HSTNAAGTA 190
Query: 608 GYMAPEWASNLPITAKVDVYSYGVV--IL 634
YMAPE +T K D++S GVV L
Sbjct: 191 LYMAPE-VFKRDVTFKCDIWSAGVVMYFL 218
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 2e-11
Identities = 48/197 (24%), Positives = 74/197 (37%), Gaps = 35/197 (17%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG+GG ++ A K L HQ E++ E+S + H ++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS-MEISIHRSLAHQHVVGFH 107
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H--- 575
GF + ++ E ++SL + L E G YLH H
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 576 --------DEFEPKIADFGLAKLSQRGSNSSQFSQIR-----GTKGYMAPEWASNLPITA 622
++ E KI DFGLA + R GT Y+APE S +
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLATKVEYDGE-------RKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 623 KVDVYSYGVVILEMVKG 639
+VDV+S G ++ ++ G
Sbjct: 221 EVDVWSIGCIMYTLLVG 237
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 2e-11
Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 39/198 (19%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLG-DLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
+ +GRG G V V A K++ + + F E+ + + H N++R++
Sbjct: 13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 72
Query: 524 GFCSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKER-----FKVALGTAKGLAYLH--- 574
+ L+ E L ++ + F +E K L +AY H
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVVHKRVF---RESDAARIMKDVL---SAVAYCHKLN 126
Query: 575 --H--------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
H + K+ DFGLA + G GT Y++P+
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQVLEG- 182
Query: 619 PITAKVDVYSYGVV--IL 634
+ D +S GV+ +L
Sbjct: 183 LYGPECDEWSAGVMMYVL 200
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 42/203 (20%), Positives = 74/203 (36%), Gaps = 39/203 (19%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWA---EVSTIGK-IYHMNLVRM 522
E+G G G V+K G +AVK++ +E ++ + K +V+
Sbjct: 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQM-RRSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 523 WG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLHHD--- 576
+G F + + + E + +K L ER K+ + K L YL
Sbjct: 90 FGTFITNTDVFIAM-ELMGT-CAEK-LKKRMQGPIPERILGKMTVAIVKALYYLKEKHGV 146
Query: 577 --------------EFEPKIADFGL-AKLSQRGSNSSQFSQIRGTKGYMAPE-----WAS 616
+ K+ DFG+ +L + + G YMAPE +
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRL----VDDKAKDRSAGCAAYMAPERIDPPDPT 202
Query: 617 NLPITAKVDVYSYGVVILEMVKG 639
+ DV+S G+ ++E+ G
Sbjct: 203 KPDYDIRADVWSLGISLVELATG 225
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 63.7 bits (156), Expect = 3e-11
Identities = 48/204 (23%), Positives = 73/204 (35%), Gaps = 48/204 (23%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVR 521
KEELG+G V + V G A K + + + E K+ H N+VR
Sbjct: 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVR 69
Query: 522 MWGFCSEGRHRLLIYEYVEKQSL-----DKHLFSSYFLGWKER-----FKVALGTAKGLA 571
+ E L+++ V L + +S E + L + +A
Sbjct: 70 LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS-------EADASHCIQQIL---ESIA 119
Query: 572 YLH-----H--------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
Y H H K+ADFGLA + GT GY++P
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---AWHGFAGTPGYLSP 176
Query: 613 EWASNLPITAKVDVYSYGVV--IL 634
E P + VD+++ GV+ IL
Sbjct: 177 EVLKKDPYSKPVDIWACGVILYIL 200
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 4e-11
Identities = 48/197 (24%), Positives = 74/197 (37%), Gaps = 35/197 (17%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG+GG ++ A K L HQ E++ E+S + H ++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS-MEISIHRSLAHQHVVGFH 81
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H--- 575
GF + ++ E ++SL + L E G YLH H
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 576 --------DEFEPKIADFGLAKLSQRGSNSSQFSQIR-----GTKGYMAPEWASNLPITA 622
++ E KI DFGLA + R GT Y+APE S +
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLATKVEYDGE-------RKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 623 KVDVYSYGVVILEMVKG 639
+VDV+S G ++ ++ G
Sbjct: 195 EVDVWSIGCIMYTLLVG 211
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 5e-11
Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVR---- 521
E +G G G VYKG + G+ A+K + EE E++ + K +H N+
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 522 -MWGFCSEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH--- 574
+ +L L+ E+ S+ + ++ KE + + +GL++LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK 149
Query: 575 --H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-----WAS 616
H + E K+ DFG++ +Q + + GT +MAPE
Sbjct: 150 VIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGRRNTFIGTPYWMAPEVIACDENP 207
Query: 617 NLPITAKVDVYSYGVVILEMVKG 639
+ K D++S G+ +EM +G
Sbjct: 208 DATYDFKSDLWSLGITAIEMAEG 230
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 7e-11
Identities = 40/235 (17%), Positives = 69/235 (29%), Gaps = 70/235 (29%)
Query: 451 FRRFSYAELKKSTKSFK------EELGRGGSGAVYKGV-LADGRAVAVK---------RL 494
F + + K+ + + LG G G V + VA++
Sbjct: 118 FFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGS 177
Query: 495 GDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY----------VEKQSL 544
E+ + K+ H ++++ F + ++ E V + L
Sbjct: 178 AREADPALNVETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRL 236
Query: 545 D----KHLFSSYFLGWKERFKVALGTAKGLAYLH-----H--------------DEFEPK 581
K F + YLH H ++ K
Sbjct: 237 KEATCKLYFYQML--------------LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 282
Query: 582 IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE---WASNLPITAKVDVYSYGVVI 633
I DFG +K+ S + GT Y+APE VD +S GV++
Sbjct: 283 ITDFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 334
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 8e-11
Identities = 49/204 (24%), Positives = 74/204 (36%), Gaps = 48/204 (23%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLG--DLHQGE-EVFWAEVSTIGKIYHMNLVR 521
KEELG+G V + V G A K + L + + E K+ H N+VR
Sbjct: 33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVR 92
Query: 522 MWGFCSEGRHRLLIYEYVEKQSL-----DKHLFSSYFLGWKER-----FKVALGTAKGLA 571
+ E L+++ V L + +S E + L + +A
Sbjct: 93 LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS-------EADASHCIQQIL---ESIA 142
Query: 572 YLH-----H--------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
Y H H K+ADFGLA + GT GY++P
Sbjct: 143 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---AWHGFAGTPGYLSP 199
Query: 613 EWASNLPITAKVDVYSYGVV--IL 634
E P + VD+++ GV+ IL
Sbjct: 200 EVLKKDPYSKPVDIWACGVILYIL 223
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 1e-10
Identities = 42/199 (21%), Positives = 77/199 (38%), Gaps = 38/199 (19%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG+G VY+ + G VA+K + + V EV ++ H +++ ++
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQ-NEVKIHCQLKHPSILELY 77
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLH-----H- 575
+ + + L+ E ++++L + F + R + G+ YLH H
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH-QIITGMLYLHSHGILHR 136
Query: 576 ----------DEFEPKIADFGLAKLSQRGSNSSQFSQIR-----GTKGYMAPEWASNLPI 620
KIADFGLA + + GT Y++PE A+
Sbjct: 137 DLTLSNLLLTRNMNIKIADFGLATQLKMPHE-------KHYTLCGTPNYISPEIATRSAH 189
Query: 621 TAKVDVYSYGVVILEMVKG 639
+ DV+S G + ++ G
Sbjct: 190 GLESDVWSLGCMFYTLLIG 208
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 1e-10
Identities = 60/254 (23%), Positives = 97/254 (38%), Gaps = 32/254 (12%)
Query: 440 LEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRL--GD 496
L+ Y Q++ + K+T LG+GG G V + G+ A K+L
Sbjct: 162 LDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKR 221
Query: 497 LHQGEEVFWA--EVSTIGKIYHMNLVRMWGFCSEGRHRL-LIYEYVEKQSLDKHLFSSYF 553
+ + + A E + K+ +V + + E + L L+ + L H++
Sbjct: 222 IKKRKGEAMALNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQ 280
Query: 554 LGWKE---RFKVALGTAKGLAYLHH----------------DEFEPKIADFGLAKLSQRG 594
G+ E F A GL LH D +I+D GLA G
Sbjct: 281 AGFPEARAVFYAA-EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQE 654
GT GYMAPE N T D ++ G ++ EM+ G S + + +
Sbjct: 340 QTIKGRV---GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG--QSPFQQRKKKIKR 394
Query: 655 AELKRFVREVKRKI 668
E++R V+EV +
Sbjct: 395 EEVERLVKEVPEEY 408
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 2e-10
Identities = 46/205 (22%), Positives = 72/205 (35%), Gaps = 47/205 (22%)
Query: 465 SFKEELGRGGSGAVYKGV-LADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLV 520
EELG+G V + V + G+ A + + + E + H N+V
Sbjct: 14 QLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIV 73
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSL-----DKHLFSSYFLGWKER-----FKVALGTAKGL 570
R+ SE H LI++ V L + +S E + L +
Sbjct: 74 RLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-------EADASHCIQQILE---AV 123
Query: 571 AYLH-----H--------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+ H H K+ADFGLA + + GT GY++
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE--GEQQAWFGFAGTPGYLS 181
Query: 612 PEWASNLPITAKVDVYSYGVV--IL 634
PE P VD+++ GV+ IL
Sbjct: 182 PEVLRKDPYGKPVDLWACGVILYIL 206
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 2e-10
Identities = 42/198 (21%), Positives = 68/198 (34%), Gaps = 41/198 (20%)
Query: 467 KEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWG 524
+ LG G K V +A AVK + + E E++ + H N+V++
Sbjct: 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK--RMEANTQKEITALKLCEGHPNIVKLHE 73
Query: 525 FCSEGRHRLLIYEYVEKQSL-----DKHLFSSYFLGWKERF--KVALGTAKGLAYLH--- 574
+ H L+ E + L K FS E + ++++H
Sbjct: 74 VFHDQLHTFLVMELLNGGELFERIKKKKHFS-------ETEASYIMRKLVSAVSHMHDVG 126
Query: 575 --H--------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
H D E KI DFG A+L ++ T Y APE +
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP--PDNQPLKTPCFTLHYAAPELLNQN 184
Query: 619 PITAKVDVYSYGVV--IL 634
D++S GV+ +
Sbjct: 185 GYDESCDLWSLGVILYTM 202
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 2e-10
Identities = 45/209 (21%), Positives = 72/209 (34%), Gaps = 48/209 (22%)
Query: 467 KEELGRGGSGAVYKGV-LADGRAVAVKRLG-DLHQGEEVFWAEVSTIGKIY-HMNLVRMW 523
++ LG G V + L + AVK + + EV + + H N++ +
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 524 GFCSEGRHRLLIYEYVEKQSL-----DKHLFSSYFLGWKERF--KVALGTAKGLAYLH-- 574
F E L++E + S+ + F+ E V A L +LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN-------ELEASVVVQDVASALDFLHNK 130
Query: 575 ---H-------------DEFEP-KIADFGLAKLSQRGSNSSQFSQIR-----GTKGYMAP 612
H ++ P KI DF L + + S S G+ YMAP
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 613 E-----WASNLPITAKVDVYSYGVV--IL 634
E + D++S GV+ IL
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYIL 219
|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 2e-10
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 13 NAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTST 72
N +FS + + + T + + R ++ + +VL D ++ IW TNT
Sbjct: 1 NNIIFSKQPDDNHPQILHATESLEILFGTHVYRFIMQTDCNLVLYD-NNNPIWATNTGGL 59
Query: 73 GAD-RAELLDTGNLVLKDRHGKILWQS 98
G RA L G LV+ +WQS
Sbjct: 60 GNGCRAVLQPDGVLVVITNENVTVWQS 86
|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 2e-09
Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
Query: 28 TVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGAD-RAELLDTGNLV 86
+W N G G RA L+ +G +V+ ++ +W + L N+V
Sbjct: 49 NPIWATNT--GGLGNGCRAVLQPDGVLVVITNENVTVWQSPVAGKAGHYVLVLQPDRNVV 106
Query: 87 LKDRHGKILWQS 98
+ +G LW +
Sbjct: 107 I---YGDALWAT 115
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 3e-10
Identities = 42/201 (20%), Positives = 72/201 (35%), Gaps = 41/201 (20%)
Query: 467 KEELGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWAEVSTIGKIYHM-NL 519
+ELGRG V + + + G+ A K R G E++ + +
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ--DCRAEILHEIAVLELAKSCPRV 91
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER-----FKVALGTAKGLAYLH 574
+ + +LI EY + E K L G+ YLH
Sbjct: 92 INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILE---GVYYLH 148
Query: 575 -----H-------------DEFEP-KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
H KI DFG+++ + ++ + +I GT Y+APE
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR---KIGHACELREIMGTPEYLAPEIL 205
Query: 616 SNLPITAKVDVYSYGVV--IL 634
+ PIT D+++ G++ +L
Sbjct: 206 NYDPITTATDMWNIGIIAYML 226
|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 3e-10
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 26 DRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGAD-RAELLDTGN 84
VW +N G G R +L NG +V+ D + VIW T T L N
Sbjct: 37 SGKPVWASNT--GGLGSGCRLTLHNNGNLVIYDQSNRVIWQTKTNGKEDHYVLVLQQDRN 94
Query: 85 LVLKDRHGKILWQS 98
+V+ +G ++W +
Sbjct: 95 VVI---YGPVVWAT 105
|
| >1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 4e-10
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 28 TVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTS-TGADRAELLDTGNLV 86
T VW +N G +A L+ +G V+ D + +W +++ G L + GN+V
Sbjct: 38 TSVWASNTGILGKK-GCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVV 96
Query: 87 LKDRHGKILWQSFDY 101
+ +G +W + Y
Sbjct: 97 I---YGSDIWSTGTY 108
|
| >1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 1e-05
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 36 DRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGAD--RAELLDTGNLVLKDRHGK 93
++ + +VL D T +W +NT G +A L GN V+ D G+
Sbjct: 14 QSLDVEPY-HFIMQEDCNLVLYD-HSTSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGR 71
Query: 94 ILWQS 98
LW S
Sbjct: 72 SLWAS 76
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 4e-10
Identities = 21/187 (11%), Positives = 47/187 (25%), Gaps = 40/187 (21%)
Query: 468 EELGRGGSGAVYKGVLAD---GRAVAVKRL-GDLHQGEEV---FWAEVSTIGKIYHMNLV 520
G ++ + D R VA+ + ++V + + +I +
Sbjct: 37 IFHGGVPPLQFWQAL--DTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVA 94
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H 575
R+ L++ E++ SL + +S + A H
Sbjct: 95 RVLDVVHTRAGGLVVAEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRAGVAL 152
Query: 576 DEFEPK---IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVV 632
P ++ G L M + D+ G
Sbjct: 153 SIDHPSRVRVSIDGDVVL--------------AYPATMPDA-------NPQDDIRGIGAS 191
Query: 633 ILEMVKG 639
+ ++
Sbjct: 192 LYALLVN 198
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 4e-10
Identities = 38/213 (17%), Positives = 61/213 (28%), Gaps = 64/213 (30%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVK---------RLGDLHQGEEVFWAEVSTIGKIY 515
+ LG G G V + VA+K E+ + K+
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 516 HMNLVRMWGFCSEGRHRLLIYEY----------VEKQSLD----KHLFSSYFLGWKERFK 561
H ++++ F + ++ E V + L K F
Sbjct: 74 HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------- 124
Query: 562 VALGTAKGLAYLH-------------------HDEFEPKIADFGLAKLSQRGSNSSQFSQ 602
+ YLH ++ KI DFG +K+ S
Sbjct: 125 ------LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET---SLMRT 175
Query: 603 IRGTKGYMAPE---WASNLPITAKVDVYSYGVV 632
+ GT Y+APE VD +S GV+
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 5e-10
Identities = 43/215 (20%), Positives = 77/215 (35%), Gaps = 51/215 (23%)
Query: 458 ELKKSTKSF------KEELGRGGSGAVYKGV-LADGRAVAVKRLGD-LHQGEEVFWAEVS 509
+L +++ F KE++G G + + A AVK + E E+
Sbjct: 12 QLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE----EIE 67
Query: 510 TIGK-IYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL-----DKHLFSSYFLGWKERF--K 561
+ + H N++ + +G++ ++ E ++ L + FS ER
Sbjct: 68 ILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFS-------EREASA 120
Query: 562 VALGTAKGLAYLH-----H--------------DEFEP-KIADFGLAKLSQRGSNSSQFS 601
V K + YLH H E +I DFG AK + + +
Sbjct: 121 VLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR--AENGLLM 178
Query: 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVV--IL 634
T ++APE A D++S GV+ +
Sbjct: 179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTM 213
|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 6e-10
Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Query: 28 TVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNT-TSTGADRAELLDTGNLV 86
VW + + G ++ +G +V+ IW +NT G L N+V
Sbjct: 38 RAVWASGTNG--KASGCVLKMQNDGNLVIYS-GSRAIWASNTNRQNGNYYLILQRDRNVV 94
Query: 87 LKDRHGKILWQS 98
+ D +W +
Sbjct: 95 IYDNSNNAIWAT 106
|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 | Back alignment and structure |
|---|
Score = 39.5 bits (92), Expect = 4e-04
Identities = 21/131 (16%), Positives = 35/131 (26%), Gaps = 28/131 (21%)
Query: 103 TDTLLPNQVFRKSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFD 162
+D L L G + ND L L YD + W
Sbjct: 1 SDRLNSGHQLDTGGSLAEGG---------YLFIIQNDCNLVL-YDN---NRAVW------ 41
Query: 163 VFQNGRTKYNSSRIAVLDDFGSFS--SSDELKFSAIDMGFGIKRRLTMDYDGNLRLYSLN 220
+G S + + + G+ S +++ L + D N+ +Y
Sbjct: 42 --ASGTNGKASGCVLKMQNDGNLVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVIYD-- 97
Query: 221 KVTGSWMISWQ 231
S W
Sbjct: 98 ---NSNNAIWA 105
|
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 | Back alignment and structure |
|---|
Score = 58.9 bits (141), Expect = 1e-09
Identities = 36/265 (13%), Positives = 78/265 (29%), Gaps = 38/265 (14%)
Query: 2 TFSCGFYGLGGNAYLFS----IWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLT 57
F G GN + +W + + R++ + + L
Sbjct: 35 RFKLLLQG-DGNLVIQDNGATVWVANEQQPFSSTIPLRNK-----KAPLAFYVQYGAFLD 88
Query: 58 DVDDTVIWMTNTTS------TGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQV 111
D +W+T+ ++ L D GN+VL D + + +
Sbjct: 89 DYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVDSLALWNGTPAIPLVPGAIDSLL 148
Query: 112 FRKSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQNGRTKY 171
++L+ GV Y +G L F D L + W G
Sbjct: 149 LAPGSELVQGV---VYGAGASKLVFQGDGNLVAYGPN---GAATW--------NAGTQGK 194
Query: 172 NSSRIAVLDDFGS--FSSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKV--TGSWM 227
+ R D + + + + + + G L + +G++ + V +
Sbjct: 195 GAVRAVFQGDGNLVVYGAGNAVLWHSHTGGHA-SAVLRLQANGSIAILDEKPVWARFGFQ 253
Query: 228 ISWQALMQPGKVHGVCGKNGICVYT 252
+++ + K++ I +
Sbjct: 254 PTYRHIR---KINPDQKPIDIWTWH 275
|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 3e-09
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 25 RDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTS-TGADRAELLDTG 83
++ +W +N G G R +L +G +V+ D ++ +W + G L G
Sbjct: 36 QNGRQIWASNT--DRRGSGCRLTLLSDGNLVIYDHNNNDVWGSACWGDNGKYALVLQKDG 93
Query: 84 NLVLKDRHGKILWQS 98
V+ +G +LW
Sbjct: 94 RFVI---YGPVLWSL 105
|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 2e-04
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 39 VNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGAD-RAELLDTGNLVLKDRHGKILWQ 97
G +++ +V + IW +NT G+ R LL GNLV+ D + +W
Sbjct: 18 QAGA-YTLTIQNKCNLVKYQ-NGRQIWASNTDRRGSGCRLTLLSDGNLVIYDHNNNDVWG 75
Query: 98 S 98
S
Sbjct: 76 S 76
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 4e-09
Identities = 47/202 (23%), Positives = 77/202 (38%), Gaps = 35/202 (17%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYHM- 517
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGF 107
Query: 518 -NLVRMWGFCSEGRHRLLIYEYVE-KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH- 574
++R+ + +LI E E Q L + L + + + + H
Sbjct: 108 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN 167
Query: 575 ----H------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
H + E K+ DFG L + ++ GT+ Y PEW
Sbjct: 168 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYH 223
Query: 619 PITA-KVDVYSYGVVILEMVKG 639
V+S G+++ +MV G
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCG 245
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 8e-09
Identities = 41/197 (20%), Positives = 66/197 (33%), Gaps = 37/197 (18%)
Query: 467 KEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-HMNLVRMWG 524
K+ LG G +G V + G+ A+K L D EV + ++V +
Sbjct: 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYD----SPKARQEVDHHWQASGGPHIVCILD 89
Query: 525 FCSEGRHR----LLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH---- 574
H L+I E +E L + + ER ++ + +LH
Sbjct: 90 VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI 149
Query: 575 ---------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
+ K+ DFG AK + + T Y+APE
Sbjct: 150 AHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN----ALQTPCYTPYYVAPEVLGPEK 205
Query: 620 ITAKVDVYSYGVV--IL 634
D++S GV+ IL
Sbjct: 206 YDKSCDMWSLGVIMYIL 222
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 2e-08
Identities = 53/260 (20%), Positives = 99/260 (38%), Gaps = 53/260 (20%)
Query: 449 SQFRRFSYAELKKSTKS---FKEELGRGGSGAVYKGVLAD-GRAVAVKRL--GDLHQGEE 502
+F ++ + E + + LGRGG G V+ + G+ A K+L L + +
Sbjct: 169 LRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 503 VFWA--EVSTIGKIYHMNLVRMWGFCSEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKE- 558
A E + K++ +V + + E + L L+ + + H+ Y +
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHI---YNVDEDNP 284
Query: 559 RFKVALGTAK--------GLAYLHH----------------DEFEPKIADFGLAKLSQRG 594
F+ A GL +LH D+ +I+D GLA + G
Sbjct: 285 GFQEP--RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342
Query: 595 SNSSQ-FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQ 653
++ ++ GT G+MAPE VD ++ GV + EM+ +
Sbjct: 343 QTKTKGYA---GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA--RGPFRARGE--- 394
Query: 654 EAELKRFVREVKRKILYEEE 673
K +E+K+++L +
Sbjct: 395 ----KVENKELKQRVLEQAV 410
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 3e-08
Identities = 43/216 (19%), Positives = 69/216 (31%), Gaps = 61/216 (28%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTI----GKI 514
LG+GG G V+ G L D VA+K + L EV+ +
Sbjct: 37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCP-LEVALLWKVGAGG 95
Query: 515 YHMNLVRMWGFCSEGRHRLLIYEY-----------VEKQSLDKHLFSSYF--LGWKERFK 561
H ++R+ + +L+ E EK L + +F +
Sbjct: 96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQV------- 148
Query: 562 VALGTAKGLAYLH-----H------------DEFEPKIADFGLAKLSQRGSNSSQFSQIR 604
+ + H H K+ DFG L ++
Sbjct: 149 -----VAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE----PYTDFD 199
Query: 605 GTKGYMAPEWASNLPIT-AKVDVYSYGVVILEMVKG 639
GT+ Y PEW S V+S G+++ +MV G
Sbjct: 200 GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 4e-08
Identities = 46/232 (19%), Positives = 78/232 (33%), Gaps = 41/232 (17%)
Query: 437 PSSLEEGYQALSSQFRRFSYAELKKST-----KSFKEELGRGGSGAVYKGV-LADGRAVA 490
P+ QF S ++KK+ K + LG G +G V + A
Sbjct: 32 PAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFA 91
Query: 491 VKRLGDLHQGEEVFWAEVSTIGKIY-HMNLVRMWGFC----SEGRHRLLIYEYVEKQSLD 545
+K L D EV + ++VR+ + + L++ E ++ L
Sbjct: 92 LKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELF 147
Query: 546 KHLFSSYFLGWKER--FKVALGTAKGLAYLH-----H-------------DEFEP-KIAD 584
+ + ER ++ + + YLH H K+ D
Sbjct: 148 SRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTD 207
Query: 585 FGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVV--IL 634
FG AK + + + T Y+APE D++S GV+ IL
Sbjct: 208 FGFAKETTSH---NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 256
|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109 | Back alignment and structure |
|---|
Score = 50.3 bits (120), Expect = 7e-08
Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Query: 28 TVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGAD-RAELLDTGNLV 86
+W N + S++ +G +V+ + IW +NT + L N+V
Sbjct: 38 KPIWATNTGG--LDRRCHLSMQSDGNLVVYSPRNNPIWASNTGGENGNYVCVLQKDRNVV 95
Query: 87 LKDRHGKILWQS 98
+ +G W +
Sbjct: 96 I---YGTARWAT 104
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 53/221 (23%)
Query: 452 RRFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTI 511
R +Y K +G G G V++ L + VA+K+ + Q + E+ +
Sbjct: 38 REIAYTNCKV--------IGNGSFGVVFQAKLVESDEVAIKK---VLQDKRFKNRELQIM 86
Query: 512 GKIYHMNLVRMWG-FCSEGRHRL-----LIYEYVEKQSLDKHLFSSYFLGWKERFKVALG 565
+ H N+V + F S G + L+ EYV + + S ++ K+ + L
Sbjct: 87 RIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE---TVYRASRHYAKLKQTMPMLLI 143
Query: 566 ------TAKGLAYLH-----HDEFEP------------KIADFGLAK-LSQRGSNSSQFS 601
+ LAY+H H + +P K+ DFG AK L N S
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYIC 203
Query: 602 QIRGTKGYMAPEW---ASNLPITAKVDVYSYGVVILEMVKG 639
++ Y APE A+N T +D++S G V+ E+++G
Sbjct: 204 ----SRYYRAPELIFGATNY--TTNIDIWSTGCVMAELMQG 238
|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 1e-07
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Query: 26 DRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTT-STGADRAELLDTGN 84
W +N NG+ L G +++ D D IW + ++ G L D G
Sbjct: 40 GGKYGWQSNTHG--NGEHCFLRLNHKGELIIKDDDFKTIWSSRSSSKQGEYVLILQDDGF 97
Query: 85 LVLKDRHGKILWQS 98
V+ +G ++++
Sbjct: 98 GVI---YGPAIFET 108
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 44/210 (20%), Positives = 77/210 (36%), Gaps = 53/210 (25%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG G G V + + AVK +L + GE E+ + ++ H N++++
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 524 G-FCSEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKERF-KVALG-----TAK------- 568
+E + ++ ++ EY G +E V A
Sbjct: 73 DVLYNEEKQKMYMVMEYCVC-------------GMQEMLDSVPEKRFPVCQAHGYFCQLI 119
Query: 569 -GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
GL YLH H + +P KI+ G+A+ + +G+ +
Sbjct: 120 DGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP 179
Query: 612 PEWASNLPI--TAKVDVYSYGVVILEMVKG 639
PE A+ L KVD++S GV + + G
Sbjct: 180 PEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 3e-07
Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 35/209 (16%)
Query: 460 KKSTKSFK--EELGRGGSGAVYKGVLA----DGRAVAVKRLG-----DLHQGEEVFWAEV 508
KK + FK + LG G V LA R A+K L ++ V E
Sbjct: 26 KKRPEDFKFGKILGEGSFSTVV---LARELATSREYAIKILEKRHIIKENKVPYVT-RER 81
Query: 509 STIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF-SSYFLGWKERFKVA-LGT 566
+ ++ H V+++ + Y + L K++ F RF A + +
Sbjct: 82 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 141
Query: 567 AKGLAYLH----------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYM 610
A L YLH +++ +I DFG AK+ S ++ + GT Y+
Sbjct: 142 A--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 199
Query: 611 APEWASNLPITAKVDVYSYGVVILEMVKG 639
+PE + D+++ G +I ++V G
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAG 228
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 3e-07
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPI---TAKVDVYSYGVVILEMV 637
I DF +A + R + + + GTK YMAPE S+ + VD +S GV E++
Sbjct: 155 HITDFNIAAMLPRETQITTMA---GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELL 211
Query: 638 KGIR 641
+G R
Sbjct: 212 RGRR 215
|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 4e-07
Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
Query: 21 FTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGAD-RAEL 79
T +VW + GQ L +G + +TD ++++NT D L
Sbjct: 38 LTKGSKTNIVWESGTSG--RGQHCFMRLGHSGELDITDDRLNTVFVSNTVGQEGDYVLIL 95
Query: 80 LDTGNLVLKDRHGKILWQS 98
G V+ +G +W +
Sbjct: 96 QINGQAVV---YGPAVWST 111
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 5e-07
Identities = 52/260 (20%), Positives = 87/260 (33%), Gaps = 50/260 (19%)
Query: 448 SSQFRRFSYAELKKSTKSFKEE-------LGRGGSGAVYKG-VLADGRAVAVKRL--GDL 497
S +F RF + + +GRGG G VY G+ A+K L +
Sbjct: 168 SDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI 227
Query: 498 HQGEEVFWAEV-----STIGKIYHMNLVRMWGFCSEGRHRL-LIYEYVEKQSLDKHLFSS 551
+ A S + +V M + +L I + + L HL
Sbjct: 228 KMKQGETLALNERIMLSLVSTGDCPFIVCMS-YAFHTPDKLSFILDLMNGGDLHYHLSQH 286
Query: 552 -YFLGWKERFKVALGTAKGLAYLHH----------------DEFEPKIADFGLAKLSQRG 594
F RF A GL ++H+ + +I+D GLA +
Sbjct: 287 GVFSEADMRFYAA-EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345
Query: 595 SNSSQFSQIRGTKGYMAPE-WASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQ 653
+ GT GYMAPE + + D +S G ++ ++++G S + + +
Sbjct: 346 KPHASV----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG--HSPFRQHKTKDK 399
Query: 654 EAELKRFVREVKRKILYEEE 673
E+ R L
Sbjct: 400 H--------EIDRMTLTMAV 411
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 6e-07
Identities = 48/211 (22%), Positives = 73/211 (34%), Gaps = 53/211 (25%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY----------H 516
LG G G V+ V + V VK + + E W E +GK+ H
Sbjct: 30 SPLGSGAFGFVWTAVDKEKNKEVVVKFI-KKEKVLEDCWIEDPKLGKVTLEIAILSRVEH 88
Query: 517 MNLVRMWGFCSEGRHRLLIYEY-----------VEKQSLDKHLFSSYFLGWKERFKVALG 565
N++++ L+ E LD+ L S F R V+
Sbjct: 89 ANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIF-----RQLVS-- 141
Query: 566 TAKGLAYLH-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY 609
+ YL H ++F K+ DFG A +RG F GT Y
Sbjct: 142 ---AVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC---GTIEY 195
Query: 610 MAPEWASNLP-ITAKVDVYSYGVVILEMVKG 639
APE P +++++S GV + +V
Sbjct: 196 CAPEVLMGNPYRGPELEMWSLGVTLYTLVFE 226
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 1e-06
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 46/206 (22%)
Query: 468 EELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG-F 525
+ +G G G VY+ L D G VA+K++ Q + E+ + K+ H N+VR+ F
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 526 CSEGRHRL-----LIYEYVEKQSLDKHLFSSYFLGWKERFKVALG------TAKGLAYLH 574
S G + L+ +YV + + + ++ K+ V + LAY+H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPE---TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 575 -----HDEFEP------------KIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEW-- 614
H + +P K+ DFG AK L + N S ++ Y APE
Sbjct: 174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC----SRYYRAPELIF 229
Query: 615 -ASNLPITAKVDVYSYGVVILEMVKG 639
A++ T+ +DV+S G V+ E++ G
Sbjct: 230 GATDY--TSSIDVWSAGCVLAELLLG 253
|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 1e-06
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 31 WTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNT-TSTGADRAELLDTGNLVLKD 89
W +N NG+ + +L G +V+ + D + +W + + G A + G LV+
Sbjct: 40 WQSNT--ANNGRDCKLTLTDYGELVIKNGDGSTVWKSGAQSVKGNYAAVVHPDGRLVV-- 95
Query: 90 RHGKILWQS 98
G +++
Sbjct: 96 -FGPSVFKI 103
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 2e-06
Identities = 51/199 (25%), Positives = 75/199 (37%), Gaps = 38/199 (19%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG G G V V AVAVK R D + + E+ + H N+V+ +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKMLNHENVVKFY 71
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAK------GLAYLH--- 574
G EG + L EY L + G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEP------DIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 575 --HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
H + +P KI+DFGLA + + + +++ GT Y+APE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 622 -AKVDVYSYGVVILEMVKG 639
VDV+S G+V+ M+ G
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 2e-06
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 56/209 (26%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWA----EVSTIGKIYHMNLVRMW 523
E++G G G VYK + GR VA+KR+ L +E + E+S + +++H N+V +
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLI 85
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTA----------KGLAYL 573
R L++E++E + L K L + K L + +G+A+
Sbjct: 86 DVIHSERCLTLVFEFME-KDLKKVL---------DENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 574 HH----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN 617
H + K+ADFGLA+ G ++ T Y AP+
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPD---- 189
Query: 618 LPI-------TAKVDVYSYGVVILEMVKG 639
+ + VD++S G + EM+ G
Sbjct: 190 --VLMGSKKYSTSVDIWSIGCIFAEMITG 216
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 3e-06
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KIADFG+ K + G + F GT Y+APE + P VD +++GV++ EM+ G
Sbjct: 482 KIADFGMCKENIWDGVTTKTFC---GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 538
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KIADFG+ K + G + F GT Y+APE + P VD +++GV++ EM+ G
Sbjct: 161 KIADFGMCKENIWDGVTTKTFC---GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 217
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 4e-06
Identities = 45/207 (21%), Positives = 75/207 (36%), Gaps = 51/207 (24%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV-FWA--EVSTIGKIYHMNLVRMW 523
+G G G V K GR VA+K+ + + V A E+ + ++ H NLV +
Sbjct: 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTA----------KGLAYL 573
C + + L++E+V+ ++ L E F L G+ +
Sbjct: 91 EVCKKKKRWYLVFEFVD-HTILDDL---------ELFPNGLDYQVVQKYLFQIINGIGFC 140
Query: 574 HH----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN 617
H K+ DFG A+ + + T+ Y APE
Sbjct: 141 HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTL--AAPGEVYDDEVATRWYRAPE---- 194
Query: 618 LPITAK-----VDVYSYGVVILEMVKG 639
L + VDV++ G ++ EM G
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMG 221
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 4e-06
Identities = 50/241 (20%), Positives = 82/241 (34%), Gaps = 50/241 (20%)
Query: 432 RRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLA----DGR 487
++ V L + + ++ S + + LG G G V L G
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVM---LVKHKESGN 67
Query: 488 AVAVKRLG-----DLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542
A+K L L Q E E + + LV++ + + ++ EYV
Sbjct: 68 HYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA-- 124
Query: 543 SLDKHLFSSYFLGWKERFKVALGTAK--------GLAYLHHDEF-----EP--------- 580
+FS L RF A+ YLH + +P
Sbjct: 125 --GGEMFS--HLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
Query: 581 --KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK 638
++ DFG AK + + + + GT +APE + VD ++ GV+I EM
Sbjct: 179 YIQVTDFGFAKRVKGRTWT-----LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 639 G 639
G
Sbjct: 234 G 234
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 4e-06
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
+ DFGL K + + S +S F GT Y+APE P VD + G V+ EM+ G
Sbjct: 179 VLTDFGLCKENIEHNSTTSTFC---GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 5e-06
Identities = 41/212 (19%), Positives = 76/212 (35%), Gaps = 61/212 (28%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWA------EVSTIGKIYHMNLV 520
++G G G V+K G+ VA+K+ + E+ E+ + ++ H NLV
Sbjct: 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKF---LESEDDPVIKKIALREIRMLKQLKHPNLV 65
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTA----------KGL 570
+ R L++EY + ++ L +R++ + + +
Sbjct: 66 NLLEVFRRKRRLHLVFEYCD-HTVLHEL---------DRYQRGVPEHLVKSITWQTLQAV 115
Query: 571 AYLH-----H-----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW 614
+ H H K+ DFG A+L S + T+ Y +PE
Sbjct: 116 NFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLL--TGPSDYYDDEVATRWYRSPE- 172
Query: 615 ASNLPI-------TAKVDVYSYGVVILEMVKG 639
+ VDV++ G V E++ G
Sbjct: 173 -----LLVGDTQYGPPVDVWAIGCVFAELLSG 199
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 5e-06
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFGL K + G+ F GT Y+APE + VD + GVV+ EM+ G
Sbjct: 289 KITDFGLCKEGIKDGATMKTFC---GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 345
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 5e-06
Identities = 51/199 (25%), Positives = 75/199 (37%), Gaps = 38/199 (19%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG G G V V AVAVK R D + + E+ + H N+V+ +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKMLNHENVVKFY 71
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAK------GLAYLH--- 574
G EG + L EY L + G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEP------DIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 575 --HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
H + +P KI+DFGLA + + + +++ GT Y+APE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 622 -AKVDVYSYGVVILEMVKG 639
VDV+S G+V+ M+ G
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 5e-06
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 56/209 (26%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWA----EVSTIGKIYHMNLVRMW 523
E++G G G VYK G A+K++ L + +E + E+S + ++ H N+V+++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTA----------KGLAYL 573
+ +L++E+++ Q L K L + + L + G+AY
Sbjct: 67 DVIHTKKRLVLVFEHLD-QDLKKLL---------DVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 574 HH----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN 617
H E E KIADFGLA+ G +++ T Y AP+
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPD---- 170
Query: 618 LPI-------TAKVDVYSYGVVILEMVKG 639
+ + +D++S G + EMV G
Sbjct: 171 --VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 5e-06
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KIADFG+ K + + ++ F GT Y+APE VD +S+GV++ EM+ G
Sbjct: 158 KIADFGMCKENMLGDAKTNTFC---GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 6e-06
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ DFGL+K S + F GT YMAPE + T D +S+GV++ EM+ G
Sbjct: 166 KLTDFGLSKESIDHEKKAYSFC---GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 6e-06
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 16/97 (16%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ D+G+ K + G +S F GT Y+APE VD ++ GV++ EM+ G
Sbjct: 193 KLTDYGMCKEGLRPGDTTSTFC---GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249
Query: 640 ----IRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672
+ + D ++ + + IL ++
Sbjct: 250 RSPFDIVGSSDNPDQNTED--------YLFQVILEKQ 278
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 7e-06
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ DFGL K S G+ + F GT YMAPE VD +S G ++ +M+ G
Sbjct: 161 KLTDFGLCKESIHDGTVTHTFC---GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 7e-06
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ADFG+ K G ++ F GT Y+APE + VD ++ GV++ EM+ G
Sbjct: 164 KLADFGMCKEGICNGVTTATFC---GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 8e-06
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ D+G+ K + G +S F GT Y+APE VD ++ GV++ EM+ G
Sbjct: 150 KLTDYGMCKEGLRPGDTTSTFC---GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 206
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 8e-06
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFGL K G+ F GT Y+APE + VD + GVV+ EM+ G
Sbjct: 145 KITDFGLCKEGISDGATMKTFC---GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 48/205 (23%), Positives = 74/205 (36%), Gaps = 43/205 (20%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWA----EVSTIGKIYHMNLVRM 522
+LG G G VYK + VA+KR+ L EE EVS + ++ H N++ +
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEEGVPGTAIREVSLLKELQHRNIIEL 98
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH------- 575
LI+EY E L K++ + + + G+ + H
Sbjct: 99 KSVIHHNHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRD 157
Query: 576 --------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPI- 620
+ KI DFGLA+ G QF+ T Y PE I
Sbjct: 158 LKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEIITLWYRPPE------IL 209
Query: 621 ------TAKVDVYSYGVVILEMVKG 639
+ VD++S + EM+
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMK 234
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-05
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFG AK + + + GT Y+APE S P +D +S+G++I EM+ G
Sbjct: 146 KITDFGFAKYVPDVTYT-----LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 2e-05
Identities = 46/195 (23%), Positives = 75/195 (38%), Gaps = 28/195 (14%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWAEVSTIGKIYHMNLVR 521
+ +G+G V + GR VA+K +L +++F EV + + H N+V+
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL-QKLF-REVRIMKILNHPNIVK 78
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HD 576
++ + LI EY + +L + + KE + Y H H
Sbjct: 79 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHR 138
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT-AKV 624
+ + KIADFG + G F G Y APE +V
Sbjct: 139 DLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC---GAPPYAAPELFQGKKYDGPEV 195
Query: 625 DVYSYGVVILEMVKG 639
DV+S GV++ +V G
Sbjct: 196 DVWSLGVILYTLVSG 210
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 2e-05
Identities = 43/208 (20%), Positives = 76/208 (36%), Gaps = 57/208 (27%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWA----EVSTIGKIYHMNLVRM 522
E++G G G V+K VA+KR+ L +E + E+ + ++ H N+VR+
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTA----------KGLAY 572
+ L++E+ + Q L K+ + L KGL +
Sbjct: 67 HDVLHSDKKLTLVFEFCD-QDLKKYF---------DSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 573 LHH----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
H E K+A+FGLA+ G +S T Y P+
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLARAF--GIPVRCYSAEVVTLWYRPPD--- 171
Query: 617 NLPI-------TAKVDVYSYGVVILEMV 637
+ + +D++S G + E+
Sbjct: 172 ---VLFGAKLYSTSIDMWSAGCIFAELA 196
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-05
Identities = 34/163 (20%), Positives = 65/163 (39%), Gaps = 37/163 (22%)
Query: 458 ELKKSTKSFK--EELGRGGSGAVYKGV-LADGRAVAVK--RLGDLHQGEEVFWA----EV 508
++K K ++ + LG G VYK + VA+K +LG + ++ E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 509 STIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVA----- 563
+ ++ H N++ + + L+++++E L+ + + +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDN-----SLVLTPSHIKAY 117
Query: 564 -LGTAKGLAYLHH----------------DEFEPKIADFGLAK 589
L T +GL YLH + K+ADFGLAK
Sbjct: 118 MLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAK 160
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 2e-05
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 49/208 (23%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVK--RLGDLHQGEEVFWA----EVSTIGKIYHMNLV 520
E+LG G VYKG+ G VA+K +L EE + E+S + ++ H N+V
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDS----EEGTPSTAIREISLMKELKHENIV 66
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALG------TAKGLAYLH 574
R++ L++E+++ L K++ S ++ L +GLA+ H
Sbjct: 67 RLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125
Query: 575 H----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
+ K+ DFGLA+ G + FS T Y AP+
Sbjct: 126 ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTFSSEVVTLWYRAPD----- 178
Query: 619 PI-------TAKVDVYSYGVVILEMVKG 639
+ + +D++S G ++ EM+ G
Sbjct: 179 -VLMGSRTYSTSIDIWSCGCILAEMITG 205
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 3e-05
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE--WASNLPITAKVDVYSYGVVILEMVK 638
+ DFGL+K + GT YMAP+ + VD +S GV++ E++
Sbjct: 199 VLTDFGLSKEFVADETERAYD-FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257
Query: 639 GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672
G S + V+ + +AE+ R+IL E
Sbjct: 258 G--ASPFTVDGEKNSQAEI-------SRRILKSE 282
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 46.1 bits (109), Expect = 3e-05
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 26/96 (27%)
Query: 563 ALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGT 606
+ AKG+ +L H D + KI DFGLA+ + + +R
Sbjct: 199 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-----YVRKG 253
Query: 607 KG-----YMAPEWASNLPITAKVDVYSYGVVILEMV 637
+MAPE + T + DV+S+GV++ E+
Sbjct: 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 289
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 8e-05
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 465 SFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLHQGEEV--FWAEVSTIGKI-Y 515
+ LGRG G V + A R VAVK L + E +E+ + I +
Sbjct: 25 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 84
Query: 516 HMNLVRMWGFCS-EGRHRLLIYEYVEKQSLDKHL 548
H+N+V + G C+ G ++I E+ + +L +L
Sbjct: 85 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 3e-05
Identities = 48/245 (19%), Positives = 86/245 (35%), Gaps = 73/245 (29%)
Query: 450 QFRRFSYAELKKSTKSFK---EELGRGGSGAVYKGV---LADGRAVAVKRLGDLHQGEEV 503
F+ +E ++ F+ ++GRG G VYK D + A+K++
Sbjct: 6 DFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEG-----TG 60
Query: 504 FWAEVSTIGKIY------HMNLVRMWG-FCSEGRHRL-LIYEYVE---KQSLDKHLFSSY 552
+S +I H N++ + F S ++ L+++Y E + H S
Sbjct: 61 I--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASK- 117
Query: 553 FLGWKERFKVALGTAK--------GLAYLHH--------------------DEFEPKIAD 584
K+ ++ G K G+ YLH + KIAD
Sbjct: 118 --ANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIAD 175
Query: 585 FGLAKLSQRGSNSSQFSQIRG---TKGYMAPEWASNLPI-------TAKVDVYSYGVVIL 634
G A+L S + + T Y APE + T +D+++ G +
Sbjct: 176 MGFARLF--NSPLKPLADLDPVVVTFWYRAPE------LLLGARHYTKAIDIWAIGCIFA 227
Query: 635 EMVKG 639
E++
Sbjct: 228 ELLTS 232
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 4e-05
Identities = 44/193 (22%), Positives = 76/193 (39%), Gaps = 27/193 (13%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG G G V G G VAVK ++ L ++ E+ + H ++++++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK-REIQNLKLFRHPHIIKLY 77
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
S ++ EYV L ++ + E ++ + Y H H +
Sbjct: 78 QVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDL 137
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT-AKVDV 626
+P KIADFGL+ + G G+ Y APE S +VD+
Sbjct: 138 KPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVISGRLYAGPEVDI 194
Query: 627 YSYGVVILEMVKG 639
+S GV++ ++ G
Sbjct: 195 WSCGVILYALLCG 207
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 4e-05
Identities = 45/199 (22%), Positives = 77/199 (38%), Gaps = 40/199 (20%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG G G V + VA+K L V E+S + + H ++++++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVE-REISYLKLLRHPHIIKLY 75
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAK------GLAYLH--- 574
+ +++ EY + LF ++ K+R G + Y H
Sbjct: 76 DVITTPTDIVMVIEYAGGE-----LFD--YIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 575 --HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
H + +P KIADFGL+ + G+ G+ Y APE +
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVINGKLYA 185
Query: 622 -AKVDVYSYGVVILEMVKG 639
+VDV+S G+V+ M+ G
Sbjct: 186 GPEVDVWSCGIVLYVMLVG 204
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 5e-05
Identities = 48/202 (23%), Positives = 75/202 (37%), Gaps = 42/202 (20%)
Query: 468 EELGRGGSGAVYKG-VLADGRAVAVKRLGDLHQGEEV-FWA--EVSTIGKIYHMNLVRMW 523
++LG G VYKG VA+K + L E A EVS + + H N+V +
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEI-RLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 524 GFCSEGRHRLLIYEYVE---KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH----- 575
+ L++EY++ KQ LD + +GLAY H
Sbjct: 67 DIIHTEKSLTLVFEYLDKDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQKVLH 123
Query: 576 -----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPI---- 620
+ E K+ADFGLA+ + + T Y P+ I
Sbjct: 124 RDLKPQNLLINERGELKLADFGLARAK--SIPTKTYDNEVVTLWYRPPD------ILLGS 175
Query: 621 ---TAKVDVYSYGVVILEMVKG 639
+ ++D++ G + EM G
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATG 197
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 5e-05
Identities = 46/231 (19%), Positives = 79/231 (34%), Gaps = 70/231 (30%)
Query: 467 KEELGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWA-------------- 506
K+E+G+G G V D A+K +L
Sbjct: 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPR 77
Query: 507 --------EVSTIGKIYHMNLVRM---WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLG 555
E++ + K+ H N+V++ +E H +++E V + + +
Sbjct: 78 GPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNE-DHLYMVFELVNQGPV----ME---VP 129
Query: 556 WKERFKVALGTAK--------GLAYLH-----HDEFEP-----------KIADFGLAKLS 591
+ A+ G+ YLH H + +P KIADFG++
Sbjct: 130 TLKPLSED--QARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
Query: 592 QRGSNSSQFSQIRGTKGYMAPEWASNLPIT---AKVDVYSYGVVILEMVKG 639
+ + S GT +MAPE S +DV++ GV + V G
Sbjct: 188 KGS--DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFG 236
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 8e-05
Identities = 46/196 (23%), Positives = 63/196 (32%), Gaps = 35/196 (17%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE 528
+G G G VAVK + +E E+ + H N+VR
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 529 GRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAK------GLAYLHH------- 575
H +I EY L + + + RF G++Y H
Sbjct: 88 PTHLAIIMEYASGGELYERICN------AGRFSEDEARFFFQQLLSGVSYCHSMQICHRD 141
Query: 576 --------DEFEP---KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT-AK 623
D KI DFG +K S SQ GT Y+APE
Sbjct: 142 LKLENTLLDGSPAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLLRQEYDGKI 198
Query: 624 VDVYSYGVVILEMVKG 639
DV+S GV + M+ G
Sbjct: 199 ADVWSCGVTLYVMLVG 214
|
| >2yil_A Microneme antigen L2; sugar binding protein, apple-domain tandem repeat, PAN_AP, P galactose-binding lectin, cellular adhesion; 1.95A {Sarcocystis muris} PDB: 2yio_A* 2yip_A* Length = 138 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 9e-05
Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 9/67 (13%)
Query: 277 PKFNRTCSSSLTEVKFVGVPNTDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQ 336
P+ + +C F N L+ S + CMK C CS F+Y
Sbjct: 3 PQLDVSC--------FAHDKNIGSRTEQLSVVHVASAQDCMKECQALPTCSHFTYN-KNS 53
Query: 337 GLCFTKS 343
C K+
Sbjct: 54 KKCHLKA 60
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 9e-05
Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 39/205 (19%)
Query: 468 EELGRGGSGAVYKG--VLADGRAVAVKRLGDLHQGEEVFWA----EVST---IGKIYHMN 518
E+G G G V+K + GR VA+KR+ + GEE EV+ + H N
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 519 LVRM----WGFCSEGRHRL-LIYEYVE---KQSLDKHLFSSYFLGWKERFKVALGTAKGL 570
+VR+ ++ +L L++E+V+ LDK + + + +GL
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGL 133
Query: 571 AYLHH----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW 614
+LH + K+ADFGLA++ S + + T Y APE
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPEV 190
Query: 615 ASNLPITAKVDVYSYGVVILEMVKG 639
VD++S G + EM +
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRR 215
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 2e-04
Identities = 49/206 (23%), Positives = 79/206 (38%), Gaps = 39/206 (18%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVK--RLGDLHQGEEVFWA----EVST---IGKIYHM 517
E+G G G VYK G VA+K R+ + G EV+ + H
Sbjct: 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHP 74
Query: 518 NLVRM----WGFCSEGRHRL-LIYEYVE---KQSLDKHLFSSYFLGWKERFKVALGTAKG 569
N+VR+ ++ ++ L++E+V+ + LDK L + + +G
Sbjct: 75 NVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA--PPPGLPAETIKDLMRQFLRG 132
Query: 570 LAYLHH----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE 613
L +LH K+ADFGLA++ S + + T Y APE
Sbjct: 133 LDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALTPVVVTLWYRAPE 189
Query: 614 WASNLPITAKVDVYSYGVVILEMVKG 639
VD++S G + EM +
Sbjct: 190 VLLQSTYATPVDMWSVGCIFAEMFRR 215
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 3e-04
Identities = 45/199 (22%), Positives = 74/199 (37%), Gaps = 39/199 (19%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVK-----RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG G G V G G VAVK ++ L ++ E+ + H ++++++
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIR-REIQNLKLFRHPHIIKLY 82
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAK------GLAYLH--- 574
S ++ EYV L ++ R G+ Y H
Sbjct: 83 QVISTPSDIFMVMEYVSGGELFDYICK------NGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 575 --HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-I 620
H + +P KIADFGL+ + G G+ Y APE S
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVISGRLYA 193
Query: 621 TAKVDVYSYGVVILEMVKG 639
+VD++S GV++ ++ G
Sbjct: 194 GPEVDIWSSGVILYALLCG 212
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 21/89 (23%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
G+ +LH H + +P KI DFGLA R + +S + T+ Y
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 193
Query: 611 APEWASNLPITAKVDVYSYGVVILEMVKG 639
APE + VD++S G ++ EM+KG
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 5e-04
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 6/64 (9%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-----WASNLPITAKVDVYSYGVVILE 635
++ADFG + GT Y++PE + D +S GV + E
Sbjct: 215 RLADFGSCLKLMEDGTVQSSVAV-GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYE 273
Query: 636 MVKG 639
M+ G
Sbjct: 274 MLYG 277
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 6e-04
Identities = 61/425 (14%), Positives = 123/425 (28%), Gaps = 129/425 (30%)
Query: 291 KFVGVPNTDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKSVLFNGFK 350
KFV Y F ++ +T ++ M + + + L+N
Sbjct: 81 KFVEEVLRINYKFLMSPIKTEQRQPSMMTRM-------YIE---------QRDRLYND-- 122
Query: 351 APNFPGIIYLKLPVSVEASEPAILNGTNPVCRLSKSQIVI-----GSPSMYDTTAKRVRW 405
F K VS L + L ++ V+ GS K
Sbjct: 123 NQVFA-----KYNVS---RLQPYLKLRQALLELRPAKNVLIDGVLGS-------GKTW-- 165
Query: 406 SYFYWFALAIGAI-----------EVFVIASGWWLLFRRQDVPSSLEEGYQALSSQF--- 451
+A+ ++F WL + + P ++ E Q L Q
Sbjct: 166 -------VALDVCLSYKVQCKMDFKIF------WLNLKNCNSPETVLEMLQKLLYQIDPN 212
Query: 452 ---RRFSYAELKKSTKSFKEELGRGGSGAVYKG---VLADGRAVAVKRLGDLH------- 498
R + +K S + EL R Y+ VL + + +L
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT 272
Query: 499 QGEEVFWAEVSTIGKIYHMNLVRM-WGFC-SEGRHRLLIYEYVEKQSL-----DKHLFSS 551
+ ++V + + H++L E + LL Y Q L +
Sbjct: 273 RFKQV--TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL 330
Query: 552 YFLGWKERFKVALGTAKGLAYLHHDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+ E + L T +++ D+ I L L +++ ++ +
Sbjct: 331 SIIA--ESIRDGLATWDNWKHVNCDKLTTIIESS-LNVL-----EPAEYRKM-----FDR 377
Query: 612 ----PEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRK 667
P + I + L ++ W + ++++ V ++ +
Sbjct: 378 LSVFPP---SAHIPTIL---------LSLI-------W----FDVIKSDVMVVVNKLHKY 414
Query: 668 ILYEE 672
L E+
Sbjct: 415 SLVEK 419
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 8e-04
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 21/89 (23%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
G+ +LH H + +P KI DFGLA R + +S + T+ Y
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 230
Query: 611 APEWASNLPITAKVDVYSYGVVILEMVKG 639
APE + VD++S G ++ EMV+
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRH 259
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 8e-04
Identities = 42/204 (20%), Positives = 69/204 (33%), Gaps = 40/204 (19%)
Query: 470 LGRGGSGAVY----KGVLADGRAVAVKRL--GDLHQGEEV--FWAEVSTIGKIYHMNLVR 521
+GRG V K G+ A+K + D+ + EV F E + + +
Sbjct: 69 IGRGAFSEVAVVKMKQ---TGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQ 125
Query: 522 MWGFCSEGRHRL-LIYEYVEKQSLDKHL--FSSYFLGWKERFKVALGTAKGLAYLH---- 574
+ F + + L L+ EY L L F RF +A + +H
Sbjct: 126 LH-FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLA-EIVMAIDSVHRLGY 183
Query: 575 -HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-------WA 615
H + +P ++ADFG + + GT Y++PE
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV-GTPDYLSPEILQAVGGGP 242
Query: 616 SNLPITAKVDVYSYGVVILEMVKG 639
+ D ++ GV EM G
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYG 266
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 9e-04
Identities = 45/227 (19%), Positives = 76/227 (33%), Gaps = 64/227 (28%)
Query: 460 KKSTKSFK--EELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVF---------WAE 507
+K F+ G+G G V G G +VA+K+ V
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKK---------VIQDPRFRNRELQI 69
Query: 508 VSTIGKIYHMNLVR-MWGFCSEGRHRL------LIYEYVEKQSLDKHLFSSYFLGWKERF 560
+ + ++H N+V+ F + G ++ EYV H + +
Sbjct: 70 MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD---TLHRCCRNYYRRQVAP 126
Query: 561 KVALG------TAKGLAYLH-------HDEFEP------------KIADFGLAKLSQRGS 595
L + + LH H + +P K+ DFG AK
Sbjct: 127 PPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE 186
Query: 596 NSSQFSQIRGTKGYMAPEW---ASNLPITAKVDVYSYGVVILEMVKG 639
+ + I ++ Y APE + T VD++S G + EM+ G
Sbjct: 187 PNV--AYI-CSRYYRAPELIFGNQHY--TTAVDIWSVGCIFAEMMLG 228
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 736 | |||
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3m7h_A | 276 | Putidacin L1; monocot mannose-binding lectin, bact | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.98 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.98 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.98 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.98 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.98 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.98 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.98 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.98 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.98 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.98 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.98 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.98 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.97 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.97 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.97 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.97 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.97 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.97 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.97 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.97 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.97 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.97 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.97 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.97 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.97 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.97 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.97 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.97 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.97 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.97 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.97 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.97 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.97 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.97 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.96 | |
| 1dlp_A | 236 | Lectin scafet precursor; two-domain lectin, beta p | 99.96 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.96 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.95 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.95 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.86 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.78 | |
| 4h3o_A | 105 | Lectin; cadmium, plant protein; 2.17A {Allium sati | 99.65 | |
| 3a0c_A | 110 | Mannose/sialic acid-binding lectin; beta-prism II, | 99.63 | |
| 2dpf_A | 115 | Curculin; sweet taste, taste modifying, plant prot | 99.61 | |
| 1xd5_A | 112 | Gastrodianin-1, antifungal protein GAFP-1; monocot | 99.59 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.59 | |
| 1b2p_A | 119 | Protein (lectin); mannose-binding lectin, monocot, | 99.58 | |
| 3a0c_A | 110 | Mannose/sialic acid-binding lectin; beta-prism II, | 99.56 | |
| 1xd5_A | 112 | Gastrodianin-1, antifungal protein GAFP-1; monocot | 99.54 | |
| 1b2p_A | 119 | Protein (lectin); mannose-binding lectin, monocot, | 99.52 | |
| 3dzw_A | 109 | Agglutinin; lectin, mannobiose, mannose-alpha1, 3- | 99.47 | |
| 2dpf_A | 115 | Curculin; sweet taste, taste modifying, plant prot | 99.44 | |
| 3mez_B | 113 | Mannose-specific lectin 3 chain 2; heterotetramer, | 99.3 | |
| 3r0e_B | 110 | Lectin; carbohydrate binding, carbohydrate, sugar | 99.28 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.28 | |
| 3mez_B | 113 | Mannose-specific lectin 3 chain 2; heterotetramer, | 99.17 | |
| 3r0e_A | 109 | Lectin; carbohydrate binding, carbohydrate, sugar | 99.17 | |
| 3mez_A | 111 | Mannose-specific lectin 3 chain 1; heterotetramer, | 99.15 | |
| 3dzw_A | 109 | Agglutinin; lectin, mannobiose, mannose-alpha1, 3- | 99.06 | |
| 3r0e_B | 110 | Lectin; carbohydrate binding, carbohydrate, sugar | 99.03 | |
| 3m7h_A | 276 | Putidacin L1; monocot mannose-binding lectin, bact | 98.93 | |
| 3mez_A | 111 | Mannose-specific lectin 3 chain 1; heterotetramer, | 98.89 | |
| 1dlp_A | 236 | Lectin scafet precursor; two-domain lectin, beta p | 98.86 | |
| 4h3o_A | 105 | Lectin; cadmium, plant protein; 2.17A {Allium sati | 98.84 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 98.83 | |
| 3r0e_A | 109 | Lectin; carbohydrate binding, carbohydrate, sugar | 98.8 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 97.92 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.36 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 97.33 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 97.29 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 96.07 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 95.76 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 95.49 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 95.38 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 95.03 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 95.0 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 94.7 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 94.22 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 93.42 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 92.78 | |
| 2ll3_A | 82 | Micronemal protein 4; cell adhesion; NMR {Toxoplas | 86.74 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 85.92 | |
| 2l2t_A | 44 | Receptor tyrosine-protein kinase ERBB-4; transmemb | 85.02 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 83.97 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 82.84 | |
| 3cxl_A | 463 | N-chimerin; SH2, RHO-GAP, structural genomics cons | 82.81 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 82.05 | |
| 2jwa_A | 44 | Receptor tyrosine-protein kinase ERBB-2; transmemb | 80.59 |
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-49 Score=411.13 Aligned_cols=248 Identities=25% Similarity=0.320 Sum_probs=199.6
Q ss_pred ccccHHHHHHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEE
Q 041821 452 RRFSYAELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMW 523 (736)
Q Consensus 452 ~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~ 523 (736)
++.++.||..++++|.++||+|+||+||+|++. +++.||||+++... ...++|.+|+.+|++++|||||+++
T Consensus 16 ~~~~~~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~ 95 (308)
T 4gt4_A 16 KQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLL 95 (308)
T ss_dssp ---CCCBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccCCcccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcc
Confidence 344455667788899999999999999999863 46789999997533 4457899999999999999999999
Q ss_pred EEEEeCCeEEEEEecCCCCCHhhhcccC----------------CCCCHHHHHHHHHHHHHHhhhhhcCC----------
Q 041821 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSS----------------YFLGWKERFKVALGTAKGLAYLHHDE---------- 577 (736)
Q Consensus 524 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~i~~gL~yLH~~~---------- 577 (736)
|+|.+++..+||||||++|+|.++|... ..++|.++..|+.|||+||+|||+++
T Consensus 96 g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~N 175 (308)
T 4gt4_A 96 GVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRN 175 (308)
T ss_dssp EEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred eEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccc
Confidence 9999999999999999999999999642 25899999999999999999999763
Q ss_pred ------CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCC
Q 041821 578 ------FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDG 650 (736)
Q Consensus 578 ------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~ 650 (736)
+.+||+|||+|+.+.............||+.|||||++.+..|+.++|||||||+||||+| |+.||.....
T Consensus 176 ILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-- 253 (308)
T 4gt4_A 176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-- 253 (308)
T ss_dssp EEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--
T ss_pred eEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--
Confidence 3789999999987755443333455789999999999999999999999999999999998 8899864321
Q ss_pred ccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 651 EGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
..+.. .+..+. ..+.+..++..+.+|+.+||+.||++||||+||+++|+..
T Consensus 254 -------~~~~~----~i~~~~------------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 254 -------QDVVE----MIRNRQ------------VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp -------HHHHH----HHHTTC------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred -------HHHHH----HHHcCC------------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 11111 111111 1123344567789999999999999999999999999875
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-47 Score=405.93 Aligned_cols=245 Identities=25% Similarity=0.331 Sum_probs=189.8
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
...++.+.++||+|+||+||+|++. +++.||||+++... ...++|.+|+++|++++|||||+++|+|.+++..
T Consensus 39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred CHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 3456778899999999999999854 37889999997643 4457799999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccC---------------CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccE
Q 041821 533 LLIYEYVEKQSLDKHLFSS---------------YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPK 581 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~---------------~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~k 581 (736)
+||||||++|+|.++|+.. .+++|.+++.|+.|||+||+|||+. +..+|
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~K 198 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVK 198 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEE
Confidence 9999999999999998653 2589999999999999999999975 34789
Q ss_pred EcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHH
Q 041821 582 IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRF 660 (736)
Q Consensus 582 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~ 660 (736)
|+|||+|+.+.............||+.|||||++.+..|+.++|||||||+||||+| |+.||..... ...
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~---------~~~ 269 (329)
T 4aoj_A 199 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN---------TEA 269 (329)
T ss_dssp ECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH---------HHH
T ss_pred EcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH---------HHH
Confidence 999999997765544333455779999999999999999999999999999999999 8999874321 111
Q ss_pred HHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccc
Q 041821 661 VREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729 (736)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (736)
.. .+..+. +...+...+..+.+|+.+||+.||++||||+||+++|+.+.+...
T Consensus 270 ~~----~i~~g~------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp 322 (329)
T 4aoj_A 270 ID----CITQGR------------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322 (329)
T ss_dssp HH----HHHHTC------------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred HH----HHHcCC------------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence 11 111111 112233445678999999999999999999999999999876543
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-48 Score=403.63 Aligned_cols=245 Identities=23% Similarity=0.332 Sum_probs=197.2
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 531 (736)
|.+..+.+.++||+|+||+||+|++. ++..||||+++... ...++|.+|+++|++++|||||+++|+|.+++.
T Consensus 10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 89 (299)
T ss_dssp CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 44567888999999999999999853 36789999997643 445789999999999999999999999999999
Q ss_pred EEEEEecCCCCCHhhhcccC-------------CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEE
Q 041821 532 RLLIYEYVEKQSLDKHLFSS-------------YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKI 582 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~-------------~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl 582 (736)
.+||||||++|+|.++|+.. ..++|.+++.|+.|||+||.|||+++ ..+||
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEE
Confidence 99999999999999999753 36999999999999999999999763 37899
Q ss_pred cccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHH
Q 041821 583 ADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFV 661 (736)
Q Consensus 583 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 661 (736)
+|||+|+...............||+.|||||++.+..|+.++|||||||+||||+| |+.||..... ..+.
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~---------~~~~ 240 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---------NEVI 240 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH---------HHHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---------HHHH
Confidence 99999987655443333344679999999999999999999999999999999998 8999974321 1111
Q ss_pred HHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 662 REVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
..+..+. ....+...+..+.+|+.+||+.||++||||++|++.|+++.+..
T Consensus 241 ----~~i~~~~------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 241 ----ECITQGR------------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp ----HHHHHTC------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred ----HHHHcCC------------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 1111111 11223344567899999999999999999999999999876543
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-47 Score=395.80 Aligned_cols=246 Identities=29% Similarity=0.434 Sum_probs=188.6
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
||..+.+.+.++||+|+||+||+|++. ..||||+++... +..+.|.+|+.+|++++|||||+++|++.+ +..+|
T Consensus 32 ei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~i 108 (307)
T 3omv_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEE
Confidence 455667788999999999999999975 369999996532 345679999999999999999999998865 56899
Q ss_pred EEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 535 IYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
|||||++|+|.++|... ..+++.++..|+.|||+||+|||+++ +.+||+|||+|+........
T Consensus 109 VmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 109 VTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp EEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred EEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999999999999764 47999999999999999999999763 37899999999877654443
Q ss_pred ceeecccccCcccChhcccC---CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 598 SQFSQIRGTKGYMAPEWASN---LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
......+||+.|||||++.+ .+|+.++|||||||+||||+||+.||...... . .+...+ .
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~-----~---~~~~~~----~----- 251 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-----D---QIIFMV----G----- 251 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-----H---HHHHHH----H-----
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH-----H---HHHHHH----h-----
Confidence 34556789999999999863 46999999999999999999999999643210 0 111111 0
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
.....|.+ ...+...+..+.+|+.+||+.||++||||.||+++|+.+..
T Consensus 252 --~~~~~p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 252 --RGYASPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp --TTCCCCCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred --cCCCCCCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 11111211 12233455788999999999999999999999999987754
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-46 Score=396.60 Aligned_cols=247 Identities=26% Similarity=0.339 Sum_probs=199.1
Q ss_pred HHHHHhhhhcccccCeeceeEEEEeeeCC------CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCC-CceeeEEEEEE
Q 041821 457 AELKKSTKSFKEELGRGGSGAVYKGVLAD------GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYH-MNLVRMWGFCS 527 (736)
Q Consensus 457 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h-~niv~l~~~~~ 527 (736)
.||..+.|++.++||+|+||+||+|++.. ++.||||+++... ...+.|.+|+++|+++.| ||||+++|+|.
T Consensus 59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~ 138 (353)
T 4ase_A 59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 138 (353)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence 46778899999999999999999998432 3679999997543 335679999999999965 89999999997
Q ss_pred eC-CeEEEEEecCCCCCHhhhcccC----------------CCCCHHHHHHHHHHHHHHhhhhhcCC-------------
Q 041821 528 EG-RHRLLIYEYVEKQSLDKHLFSS----------------YFLGWKERFKVALGTAKGLAYLHHDE------------- 577 (736)
Q Consensus 528 ~~-~~~~lv~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~i~~gL~yLH~~~------------- 577 (736)
+. +..+||||||++|+|.++|+.. ..+++.++..|+.|||+||+|||+++
T Consensus 139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl 218 (353)
T 4ase_A 139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 218 (353)
T ss_dssp CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceee
Confidence 64 5789999999999999999642 25899999999999999999999763
Q ss_pred ---CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccc
Q 041821 578 ---FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQ 653 (736)
Q Consensus 578 ---~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~ 653 (736)
..+||+|||+|+.+.............||+.|||||++.+..|+.++|||||||+||||+| |+.||......
T Consensus 219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~---- 294 (353)
T 4ase_A 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID---- 294 (353)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS----
T ss_pred CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH----
Confidence 3789999999998766555444556789999999999999999999999999999999998 89999743211
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 654 EAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
.. +.. .+..+ .+...+...+..+.+++.+||+.||++|||+.||+++|+++.+.
T Consensus 295 -~~---~~~----~i~~g------------~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 295 -EE---FCR----RLKEG------------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp -HH---HHH----HHHHT------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -HH---HHH----HHHcC------------CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 11 111 11111 11122333456788999999999999999999999999987653
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-45 Score=384.43 Aligned_cols=239 Identities=21% Similarity=0.182 Sum_probs=189.7
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
..+.+.++||+|+||+||+|+. .+|+.||||+++.... ..+|+.+|++++|||||++++++.+++..|||||||+
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 133 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 133 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence 3466778999999999999995 4589999999965432 2469999999999999999999999999999999999
Q ss_pred CCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------C-ccEEcccCcccccCCCCCcc---ee
Q 041821 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------F-EPKIADFGLAKLSQRGSNSS---QF 600 (736)
Q Consensus 541 ~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~-~~kl~DFGla~~~~~~~~~~---~~ 600 (736)
+|+|.++|++.+.+++.++..|+.||+.||+|||+++ . .+||+|||+|+.+....... ..
T Consensus 134 gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~ 213 (336)
T 4g3f_A 134 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 213 (336)
T ss_dssp TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecC
Confidence 9999999988888999999999999999999999652 2 58999999999876543221 12
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...+||+.|||||++.+..|+.++|||||||++|||++|+.||........ .. .+ ....
T Consensus 214 ~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-----~~----~i----~~~~-------- 272 (336)
T 4g3f_A 214 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-----CL----KI----ASEP-------- 272 (336)
T ss_dssp CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-----HH----HH----HHSC--------
T ss_pred CccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-----HH----HH----HcCC--------
Confidence 346799999999999999999999999999999999999999975432211 11 11 1110
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
+. ....++..+..+.+++.+||+.||++|||+.||+++|.....+
T Consensus 273 -~~-~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 273 -PP-IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp -CG-GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CC-chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 00 0112233456788999999999999999999999998876543
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=382.07 Aligned_cols=231 Identities=19% Similarity=0.200 Sum_probs=193.0
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
++|++.+.||+|+||+||+|+. .+++.||||++.+. ....+.+.+|+++|++++|||||++++++.+++..||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4689999999999999999994 56899999999653 234567899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|||++|+|.++|.+.+.+++.++..++.||+.||+|||++ +..+||+|||+|+.+.........
T Consensus 112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~ 191 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191 (311)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCB
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccc
Confidence 9999999999998888899999999999999999999975 347899999999987655544445
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ..+.. .+....
T Consensus 192 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~---------~~~~~----~i~~~~-------- 250 (311)
T 4aw0_A 192 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE---------GLIFA----KIIKLE-------- 250 (311)
T ss_dssp CCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHH----HHHHTC--------
T ss_pred cCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---------HHHHH----HHHcCC--------
Confidence 678899999999999999999999999999999999999999974321 11111 111111
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVV 718 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 718 (736)
. .++...+..+.+|+.+||+.||++|||++|++
T Consensus 251 -~----~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 251 -Y----DFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -C----CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -C----CCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 0 11222345788999999999999999999864
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-45 Score=380.73 Aligned_cols=261 Identities=23% Similarity=0.281 Sum_probs=190.1
Q ss_pred hhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC----eEEEEEe
Q 041821 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR----HRLLIYE 537 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~e 537 (736)
.++.+.++||+|+||+||+|++ +|+.||||+++........+..|+..+.+++|||||+++|+|.+++ ..+||||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 3577889999999999999998 5899999999765444444556777778899999999999998754 5799999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC------------------------CCccEEcccCcccccCC
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD------------------------EFEPKIADFGLAKLSQR 593 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~------------------------~~~~kl~DFGla~~~~~ 593 (736)
||++|+|.++|+.. .++|..+.+++.|+++||+|||++ ++.+||+|||+|+....
T Consensus 82 y~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 160 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160 (303)
T ss_dssp CCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred CCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccC
Confidence 99999999999765 599999999999999999999953 34789999999987755
Q ss_pred CCCcc--eeecccccCcccChhcccCC------CCccccceechhHHHHHHHhCCCCCCccccCCccchhHH--HHHHHH
Q 041821 594 GSNSS--QFSQIRGTKGYMAPEWASNL------PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAEL--KRFVRE 663 (736)
Q Consensus 594 ~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~--~~~~~~ 663 (736)
..... .....+||+.|||||++.+. .++.++|||||||+||||++|++|+.............. ......
T Consensus 161 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~ 240 (303)
T 3hmm_A 161 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240 (303)
T ss_dssp TTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHH
T ss_pred CCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHH
Confidence 43321 22346799999999999764 478899999999999999999888754322111000000 000111
Q ss_pred HHHHHhhhccccccccccCccCCC-CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccccc
Q 041821 664 VKRKILYEEEAWIEEIVDPRLKGK-FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEIH 731 (736)
Q Consensus 664 ~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 731 (736)
..... ....++|.+... .+.+.+..+.+|+.+||+.||++||||.||+++|+++.++..+.
T Consensus 241 ~~~~~-------~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~ik 302 (303)
T 3hmm_A 241 MRKVV-------CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIK 302 (303)
T ss_dssp HHHHH-------TTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC----
T ss_pred HHHHH-------hcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcCCC
Confidence 11111 112222322211 12356678999999999999999999999999999988766554
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=386.90 Aligned_cols=232 Identities=19% Similarity=0.266 Sum_probs=183.4
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
++|++.++||+|+||+||+|+. .+++.||||++.... ...+.+.+|+++|++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4688999999999999999995 568999999996532 334678999999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 538 YVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
||++|+|.++|.... .+++.+++.|+.||+.||+|||+++ ..+||+|||+|+.+.... ..
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 181 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV--EL 181 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH--HH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc--cc
Confidence 999999999996543 6799999999999999999999763 378999999998764321 12
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....+||+.|||||++.+..|+.++|||||||+||||++|+.||..... ..... .+..+. .
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~---------~~~~~----~i~~~~---~--- 242 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM---------KNLVL----KIISGS---F--- 242 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH---------HHHHH----HHHHTC---C---
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH---------HHHHH----HHHcCC---C---
Confidence 3457899999999999999999999999999999999999999974321 11111 111111 1
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+ ..+...+..+.+|+.+||+.||++|||+.|++++
T Consensus 243 --~----~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 243 --P----PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp --C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --C----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 1122334678899999999999999999999875
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=374.95 Aligned_cols=228 Identities=24% Similarity=0.323 Sum_probs=181.4
Q ss_pred hcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEe----CCeEEEEE
Q 041821 465 SFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE----GRHRLLIY 536 (736)
Q Consensus 465 ~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 536 (736)
.+.++||+|+||+||+|+. .++..||||++.... ...+.|.+|+++|++++|||||++++++.+ .+..+|||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 5677899999999999995 458899999996432 334678999999999999999999999875 34679999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC-------------------CccEEcccCcccccCCCCCc
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE-------------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-------------------~~~kl~DFGla~~~~~~~~~ 597 (736)
|||++|+|.+++.+...+++..+..++.||++||+|||+++ ..+||+|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~--- 185 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS--- 185 (290)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT---
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC---
Confidence 99999999999988888999999999999999999999754 26899999999865432
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
.....+||+.|||||++.+ .|+.++|||||||+||||++|+.||..... ...+ ...+..+.
T Consensus 186 -~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~--------~~~~----~~~i~~~~----- 246 (290)
T 3fpq_A 186 -FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN--------AAQI----YRRVTSGV----- 246 (290)
T ss_dssp -SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--------HHHH----HHHHTTTC-----
T ss_pred -ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc--------HHHH----HHHHHcCC-----
Confidence 2456789999999999875 699999999999999999999999963211 0111 11111110
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+.. +...+..+.+|+.+||+.||++|||+.|+++|
T Consensus 247 --~~~~~----~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 247 --KPASF----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp --CCGGG----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --CCCCC----CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00111 11123468899999999999999999999876
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=382.16 Aligned_cols=233 Identities=24% Similarity=0.353 Sum_probs=190.5
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
..|++.++||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+.+|++++|||||++++++.+++..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 4578889999999999999995 469999999996533 34456889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceeecc
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
++|+|.+++.+. .+++.++..++.||+.||+|||++ +..+||+|||+|+.+..... .....
T Consensus 154 ~gg~L~~~l~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~ 230 (346)
T 4fih_A 154 EGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSL 230 (346)
T ss_dssp TTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--CBCCC
T ss_pred CCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC--ccccc
Confidence 999999999764 699999999999999999999965 34789999999997755432 24567
Q ss_pred cccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
+||+.|||||++.+..|+.++|||||||++|||++|+.||..... ......+. .. ..+.
T Consensus 231 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~---------~~~~~~i~----~~--------~~~~ 289 (346)
T 4fih_A 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---------LKAMKMIR----DN--------LPPR 289 (346)
T ss_dssp CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---------HHHHHHHH----HS--------SCCC
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH---------HHHHHHHH----cC--------CCCC
Confidence 899999999999999999999999999999999999999964211 11111111 11 1111
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+ ......+..+.+|+.+||+.||++|||+.|+++|
T Consensus 290 ~--~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 290 L--KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp C--SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred C--CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1 1122345678899999999999999999999986
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=362.73 Aligned_cols=229 Identities=19% Similarity=0.245 Sum_probs=175.5
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
.+|++.+.||+|+||+||+|+. .+++.||||++++. ....+.+.+|+++|++++|||||++++++.+++..+|||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5789999999999999999994 56899999999643 233467899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
||| +|+|.+++.+...+++.++..++.||+.||+|||+++ ..+||+|||+|+....... .
T Consensus 93 Ey~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~---~ 168 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---L 168 (275)
T ss_dssp ECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC------------
T ss_pred eCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCc---c
Confidence 999 6899999988889999999999999999999999763 3789999999987654322 4
Q ss_pred ecccccCcccChhcccCCCC-ccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPI-TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
...+||+.|||||++.+..| +.++||||+||++|||++|+.||.... ...+.. .+..+.
T Consensus 169 ~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~---------~~~~~~----~i~~~~------- 228 (275)
T 3hyh_A 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES---------IPVLFK----NISNGV------- 228 (275)
T ss_dssp ------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS---------HHHHHH----HHHHTC-------
T ss_pred CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC---------HHHHHH----HHHcCC-------
Confidence 45789999999999998886 579999999999999999999996321 111111 111111
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ..+...+..+.+|+.+||+.||++|||++|+++|
T Consensus 229 --~----~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 229 --Y----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp --C----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred --C----CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 0 1122234578899999999999999999999986
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=383.08 Aligned_cols=233 Identities=24% Similarity=0.348 Sum_probs=190.5
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
..|++.++||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+.+|++++|||||++++++.+++..|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 4588899999999999999995 458999999996533 34456889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceeecc
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
++|+|.+++... .+++.++..|+.||+.||+|||++ +..+||+|||+|+.+..... .....
T Consensus 231 ~gG~L~~~i~~~-~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~ 307 (423)
T 4fie_A 231 EGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSL 307 (423)
T ss_dssp TTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC--CBCCC
T ss_pred CCCcHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc--ccccc
Confidence 999999999754 599999999999999999999975 34789999999997755432 24567
Q ss_pred cccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
+||+.|||||++.+..|+.++|||||||++|||++|+.||..... ......+. . ...+.
T Consensus 308 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~---------~~~~~~i~----~--------~~~~~ 366 (423)
T 4fie_A 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---------LKAMKMIR----D--------NLPPR 366 (423)
T ss_dssp EECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---------HHHHHHHH----H--------SCCCC
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH---------HHHHHHHH----c--------CCCCC
Confidence 899999999999999999999999999999999999999963211 11111111 1 11111
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+ ......+..+.+|+.+||+.||++|||+.|+++|
T Consensus 367 ~--~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 367 L--KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp C--SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred C--cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1 1112234678899999999999999999999986
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-44 Score=371.44 Aligned_cols=231 Identities=20% Similarity=0.166 Sum_probs=181.2
Q ss_pred hhhhcccccCeeceeEEEEeeeC----CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA----DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
++|++.+.||+|+||+||+|+.. .++.||||++++.. .....+.+|+++|++++|||||++++++.+++..||
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57899999999999999999842 36789999996532 233468899999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
|||||++|+|.++|.+...+++.++..++.||+.||+|||+++ ..+||+|||+|+.......
T Consensus 104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-- 181 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-- 181 (304)
T ss_dssp EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----C--
T ss_pred EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCc--
Confidence 9999999999999988888999999999999999999999763 3789999999986544322
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||..... ..... .+....
T Consensus 182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~---------~~~~~----~i~~~~------ 242 (304)
T 3ubd_A 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR---------KETMT----MILKAK------ 242 (304)
T ss_dssp CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHH----HHHHCC------
T ss_pred cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH---------HHHHH----HHHcCC------
Confidence 24457899999999999999999999999999999999999999974321 11111 111111
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT-----MDSVVQS 720 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 720 (736)
..++...+..+.+|+.+||+.||++||| ++|+++|
T Consensus 243 -------~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 243 -------LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp -------CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred -------CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 0122234467889999999999999998 4677764
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-42 Score=356.69 Aligned_cols=232 Identities=21% Similarity=0.277 Sum_probs=169.8
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC--------
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR-------- 530 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 530 (736)
.+|++.+.||+|+||+||+|+. .+++.||||+++... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4588899999999999999995 468999999996433 33467899999999999999999999987644
Q ss_pred ----eEEEEEecCCCCCHhhhcccCC---CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCc
Q 041821 531 ----HRLLIYEYVEKQSLDKHLFSSY---FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGL 587 (736)
Q Consensus 531 ----~~~lv~e~~~~gsL~~~l~~~~---~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGl 587 (736)
..|||||||++|+|.+++.... ..++..++.|+.||++||+|||+++ ..+||+|||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCcc
Confidence 3689999999999999998765 3556778999999999999999763 3789999999
Q ss_pred ccccCCCCCcc----------eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHH
Q 041821 588 AKLSQRGSNSS----------QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAEL 657 (736)
Q Consensus 588 a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~ 657 (736)
|+.+....... ..+..+||+.|||||++.+..|+.++|||||||++|||++ ||.... ..
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~--------~~ 233 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM--------ER 233 (299)
T ss_dssp C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH--------HH
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc--------HH
Confidence 98775543221 1234679999999999999999999999999999999996 664211 01
Q ss_pred HHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 658 KRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
....... .. ... +.........+.+|+.+||+.||++|||+.|++++
T Consensus 234 ~~~~~~~----~~-----------~~~-p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 234 VRTLTDV----RN-----------LKF-PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHH----HT-----------TCC-CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHH----hc-----------CCC-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1111110 00 000 00112233457789999999999999999999985
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=353.00 Aligned_cols=249 Identities=18% Similarity=0.217 Sum_probs=185.0
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEe------CCe
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE------GRH 531 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 531 (736)
++|++.+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 4688999999999999999995 569999999997543 234568899999999999999999999864 357
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.|||||||+ |+|.+++.....+++.++..++.||+.||.|||+++ ..+||+|||+|+.+....
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~ 212 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 212 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC----
T ss_pred EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCc
Confidence 899999996 789999988889999999999999999999999763 378999999998764432
Q ss_pred C--cceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhc
Q 041821 596 N--SSQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 596 ~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (736)
. .......+||+.|||||++.+. .++.++||||+||++|||++|++||..... ...+..+.. ......
T Consensus 213 ~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~-----~~~l~~I~~----~~g~p~ 283 (398)
T 4b99_A 213 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY-----VHQLQLIMM----VLGTPS 283 (398)
T ss_dssp ---CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH-----HHHHHHHHH----HHCCCC
T ss_pred cccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH-----HHHHHHHHH----hcCCCC
Confidence 1 1224567899999999998875 479999999999999999999999974321 111111111 100000
Q ss_pred ccccc--------ccccC-ccCCCCCH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 673 EAWIE--------EIVDP-RLKGKFNT-----NQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 673 ~~~~~--------~~~d~-~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..... ..+.. ......+. .....+.+|+.+||+.||++|||+.|+++|
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 284 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 00000 00001111 123578899999999999999999999986
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-39 Score=367.88 Aligned_cols=234 Identities=21% Similarity=0.263 Sum_probs=190.6
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
+.|++.+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+.+|+.++|||||++++++.+.+..+||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 4688999999999999999995 468999999996543 34567889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC------------------CccEEcccCcccccCCCCCccee
Q 041821 540 EKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE------------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 540 ~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~------------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
++|+|.++|... ..+++.++..++.||+.||.|||+++ ..+||+|||+|+.+.... ..
T Consensus 237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~---~~ 313 (573)
T 3uto_A 237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SV 313 (573)
T ss_dssp CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS---EE
T ss_pred CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC---ce
Confidence 999999998654 47999999999999999999999652 368999999999876543 24
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...+||+.|||||++.+..|+.++|||||||++|||++|+.||..... .... ..+.... ...
T Consensus 314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~---------~~~~----~~i~~~~-----~~~ 375 (573)
T 3uto_A 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND---------DETL----RNVKSCD-----WNM 375 (573)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH---------HHHH----HHHHTTC-----CCC
T ss_pred eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH---------HHHH----HHHHhCC-----CCC
Confidence 567899999999999999999999999999999999999999974321 1111 1111111 000
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
... .....+..+.+|+.+||+.||++|||+.|+++|
T Consensus 376 ~~~----~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 376 DDS----AFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp CSG----GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred Ccc----cccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111 111234578899999999999999999999986
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-39 Score=343.13 Aligned_cols=181 Identities=23% Similarity=0.273 Sum_probs=152.5
Q ss_pred hhhhcccccCeeceeEEEEeeeC----CCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA----DGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|++.++||+|+||+||+|+.+ .++.||||++.... ....+.+|+++|+.+ +|||||++++++.+.++.+|||
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 56899999999999999999842 46789999986543 345678999999998 6999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC-----------------CccEEcccCcccccCCCCCc--
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE-----------------FEPKIADFGLAKLSQRGSNS-- 597 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-----------------~~~kl~DFGla~~~~~~~~~-- 597 (736)
|||++|+|.+++. .+++.++..++.||+.||+|||+++ ..+||+|||+|+........
T Consensus 100 E~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~ 176 (361)
T 4f9c_A 100 PYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELL 176 (361)
T ss_dssp ECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGG
T ss_pred eCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccc
Confidence 9999999999984 4899999999999999999999752 36899999999865432211
Q ss_pred ------------------------ceeecccccCcccChhcccCCC-CccccceechhHHHHHHHhCCCCCCcc
Q 041821 598 ------------------------SQFSQIRGTKGYMAPEWASNLP-ITAKVDVYSYGVVILEMVKGIRLSNWV 646 (736)
Q Consensus 598 ------------------------~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el~tg~~p~~~~ 646 (736)
......+||+.|||||++.+.+ |+.++||||+||++|||++|+.||...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 177 KFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp GGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 1123457999999999998764 899999999999999999999999643
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=330.59 Aligned_cols=259 Identities=33% Similarity=0.533 Sum_probs=212.7
Q ss_pred hhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
..|++.+.||+|+||.||+|+..+++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 39 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (321)
T 2qkw_B 39 NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME 118 (321)
T ss_dssp CCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCT
T ss_pred hccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCC
Confidence 4567788999999999999998889999999987543 445778999999999999999999999999999999999999
Q ss_pred CCCHhhhcccCC----CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCccee
Q 041821 541 KQSLDKHLFSSY----FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 541 ~gsL~~~l~~~~----~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
+|+|.+++.... .+++..+..++.|+++||.|||+. +..+||+|||+++...........
T Consensus 119 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 198 (321)
T 2qkw_B 119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198 (321)
T ss_dssp TCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCB
T ss_pred CCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 999999997643 589999999999999999999975 347899999999875543333223
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
....||+.|+|||++.+..++.++||||||+++|||++|+.||......... ....+.......+. +...+
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~------~~~~~~~~~~~~~~---~~~~~ 269 (321)
T 2qkw_B 199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV------NLAEWAVESHNNGQ---LEQIV 269 (321)
T ss_dssp CCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCC------CHHHHTHHHHTTTC---CCSSS
T ss_pred cccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHH------HHHHHhhhcccccc---HHHhc
Confidence 4566999999999999889999999999999999999999999754432221 11222222222222 56667
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccc
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (736)
++.+....+...+..+.+++.+||+.||++|||+.||+++|+.+....+
T Consensus 270 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~ 318 (321)
T 2qkw_B 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318 (321)
T ss_dssp SSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred ChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence 7777777888999999999999999999999999999999998765433
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=355.68 Aligned_cols=232 Identities=22% Similarity=0.213 Sum_probs=184.8
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHH---HHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWA---EVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~---E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
.+|++.+.||+|+||+||+|+. .+|+.||||++++.. .....+.+ ++.+++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 4688899999999999999995 458999999996532 22333333 467778889999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~ 597 (736)
||||||++|+|.++|.+.+.+++..+..++.||+.||.|||++ ++.+||+|||+|+.+....
T Consensus 269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~-- 346 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 346 (689)
T ss_dssp EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC--
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCC--
Confidence 9999999999999998888899999999999999999999975 3478999999998775433
Q ss_pred ceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
....+||+.|||||++.+ ..|+.++|||||||+||||++|+.||....... ...+. .......
T Consensus 347 --~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~------~~~i~----~~i~~~~---- 410 (689)
T 3v5w_A 347 --PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD------KHEID----RMTLTMA---- 410 (689)
T ss_dssp --CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC------HHHHH----HHHHHCC----
T ss_pred --CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH------HHHHH----HhhcCCC----
Confidence 345689999999999974 579999999999999999999999997432211 11111 1111110
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT-----MDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 720 (736)
..++...+..+.+|+.+||+.||++|++ +.||++|
T Consensus 411 ---------~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 411 ---------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp ---------CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred ---------CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 1122234567889999999999999998 7888765
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=331.15 Aligned_cols=270 Identities=38% Similarity=0.597 Sum_probs=215.1
Q ss_pred cccccccHHHHHHh--hhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEE
Q 041821 449 SQFRRFSYAELKKS--TKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWG 524 (736)
Q Consensus 449 ~~~~~~~~~~i~~~--~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~ 524 (736)
...+.+++.++... .|.+.+.||+|+||.||+|+..+++.||||++.... .....+.+|+.++++++||||+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 44567787777654 566678999999999999998889999999997543 22346889999999999999999999
Q ss_pred EEEeCCeEEEEEecCCCCCHhhhcccCC----CCCHHHHHHHHHHHHHHhhhhhcC---CC----------------ccE
Q 041821 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSY----FLGWKERFKVALGTAKGLAYLHHD---EF----------------EPK 581 (736)
Q Consensus 525 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~----~l~~~~~~~i~~~i~~gL~yLH~~---~~----------------~~k 581 (736)
++.+.+..++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. ++ .+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 9999999999999999999999997643 499999999999999999999986 33 789
Q ss_pred EcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHH
Q 041821 582 IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFV 661 (736)
Q Consensus 582 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~ 661 (736)
|+|||+++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||........... ...
T Consensus 175 l~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----~~~ 249 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV----MLL 249 (326)
T ss_dssp ECCCSSCEECCSSSSC-EECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCS----BHH
T ss_pred eccCccccccCccccc-ccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccch----hHH
Confidence 9999999877544332 24456699999999999888899999999999999999999999964321111100 111
Q ss_pred HHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 662 REVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
.+....... .....+.+..+....+...+..+.+++.+||+.||++|||+.||+++|++...
T Consensus 250 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~ 311 (326)
T 3uim_A 250 DWVKGLLKE---KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311 (326)
T ss_dssp HHHTTTTSS---CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred HHHHHHhhc---hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence 111111111 12556666677777888999999999999999999999999999999987543
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=319.82 Aligned_cols=242 Identities=23% Similarity=0.338 Sum_probs=197.2
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
....|.+.+.||+|+||.||+|+..+++.||||++.......+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 34678889999999999999999888899999999877777788999999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceeec
Q 041821 540 EKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 540 ~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
++++|.+++.... .+++..+..++.|+++||.|||+.++ .+||+|||+++........ ....
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~ 166 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTG 166 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH-STTS
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccc-cccC
Confidence 9999999996543 68999999999999999999997643 6899999999866443211 1233
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
..+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ..... .+...
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~---------~~~~~----~~~~~---------- 223 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN---------SEVVE----DISTG---------- 223 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---------HHHHH----HHHTT----------
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH---------HHHHH----HHhcC----------
Confidence 456788999999998899999999999999999999 8989863311 11111 11111
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
.....+...+..+.+++.+||+.||++|||+.+++++|+++.+.
T Consensus 224 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 224 --FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp --CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --ccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 01111222345788999999999999999999999999988654
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=325.16 Aligned_cols=242 Identities=26% Similarity=0.377 Sum_probs=186.8
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
+...+|++.+.||+|+||.||+|+. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 4456788999999999999999987 58899999996543 2345788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCC---CCCHHHHHHHHHHHHHHhhhhhcCC--C----------------ccEEcccCcccccCCC
Q 041821 536 YEYVEKQSLDKHLFSSY---FLGWKERFKVALGTAKGLAYLHHDE--F----------------EPKIADFGLAKLSQRG 594 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~---~l~~~~~~~i~~~i~~gL~yLH~~~--~----------------~~kl~DFGla~~~~~~ 594 (736)
|||+++|+|.+++.... .+++..+..++.||++||.|||+.+ + .+||+|||+++.....
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 99999999999998765 3999999999999999999999876 3 6899999999865433
Q ss_pred CCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........ .
T Consensus 193 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~---------~~~~~~~~----~---- 253 (309)
T 3p86_A 193 FL--SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP---------AQVVAAVG----F---- 253 (309)
T ss_dssp -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH---------HHHHHHHH----H----
T ss_pred cc--ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHH----h----
Confidence 21 13456799999999999999999999999999999999999999964321 01111110 0
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
.......+...+..+.+++.+||+.||++|||+.+|++.|+.+.+.
T Consensus 254 -------~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 254 -------KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp -------SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred -------cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0001122233446788999999999999999999999999988654
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=327.31 Aligned_cols=260 Identities=25% Similarity=0.315 Sum_probs=197.7
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC----eEEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR----HRLLI 535 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv 535 (736)
....|.+.++||+|+||.||+|+.. ++.||||++.........+..|+.++++++||||+++++++.+.. ..++|
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 3457888999999999999999974 789999999776666666778999999999999999999998744 46999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC--------------------------CCccEEcccCccc
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD--------------------------EFEPKIADFGLAK 589 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~--------------------------~~~~kl~DFGla~ 589 (736)
|||+++|+|.+++... .+++..+..++.|+++||.|||+. +..+||+|||+++
T Consensus 101 ~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~ 179 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179 (322)
T ss_dssp EECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence 9999999999999764 499999999999999999999975 2378999999998
Q ss_pred ccCCCCCcceeecccccCcccChhcccC-----CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHH-H--HHH
Q 041821 590 LSQRGSNSSQFSQIRGTKGYMAPEWASN-----LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAEL-K--RFV 661 (736)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~-~--~~~ 661 (736)
...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||.............. . ...
T Consensus 180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 259 (322)
T 3soc_A 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL 259 (322)
T ss_dssp EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence 7765544333445679999999999986 3567799999999999999999999975433221110000 0 000
Q ss_pred HHHHHHHhhhccccccccccCccCCC-CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 662 REVKRKILYEEEAWIEEIVDPRLKGK-FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
....... ......+.+... .....+..+.+|+.+||+.||++|||+.||++.|+.+.+..
T Consensus 260 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 260 EDMQEVV-------VHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp HHHHHHH-------TTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred hhhhhhh-------hcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1111111 111111111111 12345677999999999999999999999999999886543
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=318.55 Aligned_cols=244 Identities=24% Similarity=0.331 Sum_probs=198.1
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+...+|.+.+.||+|+||.||+|+..++..||||+++......+++.+|+.++++++||||+++++++.+....++||||
T Consensus 5 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 5 LKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred echhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 35577889999999999999999988888999999987776778899999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+++++|.+++.... .+++..+..++.|++.||.|||+. +..+||+|||+++........ ...
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-~~~ 163 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV-SSV 163 (268)
T ss_dssp CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE-ECC
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhh-ccc
Confidence 99999999997654 599999999999999999999975 347899999999876554322 233
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... .... ....... .
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---------~~~~----~~~~~~~-----~-- 223 (268)
T 3sxs_A 164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN---------SEVV----LKVSQGH-----R-- 223 (268)
T ss_dssp SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH---------HHHH----HHHHTTC-----C--
T ss_pred CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh---------HHHH----HHHHcCC-----C--
Confidence 4456778999999998889999999999999999999 9999863321 0011 1111110 0
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
...+...+..+.+++.+||+.||++|||+.+++++|+.+.+..
T Consensus 224 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 224 -----LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp -----CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred -----CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 0111122457889999999999999999999999999997654
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-37 Score=331.03 Aligned_cols=242 Identities=24% Similarity=0.292 Sum_probs=194.3
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC--------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEEEe
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA--------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE 528 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 528 (736)
....|.+.+.||+|+||.||+|+.. ++..||||+++... ...+.+.+|+.+|+++ +||||+++++++.+
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 4567889999999999999999842 34579999997643 3346789999999999 89999999999999
Q ss_pred CCeEEEEEecCCCCCHhhhcccCC----------------CCCHHHHHHHHHHHHHHhhhhhcC----------------
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSSY----------------FLGWKERFKVALGTAKGLAYLHHD---------------- 576 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~i~~gL~yLH~~---------------- 576 (736)
.+..++||||+++|+|.+++.... .+++.++..++.||++||.|||+.
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~ 238 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 238 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECC
Confidence 999999999999999999997542 478999999999999999999975
Q ss_pred CCccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchh
Q 041821 577 EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEA 655 (736)
Q Consensus 577 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~ 655 (736)
+..+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 239 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~------ 312 (370)
T 2psq_A 239 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE------ 312 (370)
T ss_dssp TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG------
T ss_pred CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH------
Confidence 34789999999987665443333344567889999999999999999999999999999999 99998643211
Q ss_pred HHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 656 ELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
.+... +..+ .....+...+..+.+++.+||+.||++|||+.||+++|+.+..
T Consensus 313 ---~~~~~----~~~~------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 313 ---ELFKL----LKEG------------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp ---GHHHH----HHTT------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHHH----HhcC------------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11111 1111 1112233345678999999999999999999999999998754
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-37 Score=320.16 Aligned_cols=244 Identities=20% Similarity=0.308 Sum_probs=195.8
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+...+|.+.+.||+|+||.||++...++..||||+++......+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 45667889999999999999999988888999999987776778899999999999999999999999999999999999
Q ss_pred CCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+++++|.+++.. ...+++.++..++.|++.||.|||+.+ ..+||+|||+++........ ...
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~-~~~ 179 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSV 179 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH-STT
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccc-ccc
Confidence 999999999976 347999999999999999999999763 37899999999866443211 123
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ..... .+... .
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~---------~~~~~----~~~~~--------~ 238 (283)
T 3gen_A 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN---------SETAE----HIAQG--------L 238 (283)
T ss_dssp STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH---------HHHHH----HHHTT--------C
T ss_pred CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh---------hHHHH----HHhcc--------c
Confidence 3456788999999998889999999999999999998 9999864321 01111 11111 0
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
. ...+...+..+.+++.+||+.||++|||+.+++++|+++.++.
T Consensus 239 ~----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 239 R----LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp C----CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred C----CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 1 1112222457889999999999999999999999999987653
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=321.56 Aligned_cols=245 Identities=25% Similarity=0.365 Sum_probs=194.0
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc-cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL-HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
..+|.+.+.||+|+||.||+|+. .+++.||+|++... ....+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 45778889999999999999995 45899999998653 34557789999999999999999999999999999999999
Q ss_pred CCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc---
Q 041821 539 VEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS--- 598 (736)
Q Consensus 539 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~--- 598 (736)
+++++|.+++.. ...+++.++..++.|+++||+|||+.+ ..+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 168 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence 999999999987 457999999999999999999999763 368999999998765433211
Q ss_pred ---------eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 599 ---------QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 599 ---------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
......||+.|+|||++.+..++.++||||||+++|||++|..|+.................
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~--------- 239 (310)
T 3s95_A 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGF--------- 239 (310)
T ss_dssp -----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHH---------
T ss_pred ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcc---------
Confidence 11245799999999999999999999999999999999999999875433221111000000
Q ss_pred hhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 670 YEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 670 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
.+.. .+...+..+.+++.+||+.||++|||+.+|++.|+.+....
T Consensus 240 ----------~~~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 240 ----------LDRY----CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp ----------HHHT----CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----------cccc----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 0000 11122346888999999999999999999999999886543
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-37 Score=341.71 Aligned_cols=246 Identities=24% Similarity=0.316 Sum_probs=198.9
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
++....+.+.+.||+|+||.||+|+..++..||||+++......+.+.+|+.+|++++|||||++++++. .+..+||||
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 4566788899999999999999999888899999999876667888999999999999999999999986 567899999
Q ss_pred cCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 538 YVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|+++|+|.+++.... .+++..+..++.||+.||+|||+++ ..+||+|||+++........ .
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~-~ 341 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT-A 341 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH-T
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee-c
Confidence 999999999997543 6899999999999999999999763 37899999999876432111 1
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....+|+.|+|||++....++.++|||||||++|||++ |+.||..... ......+ ..+
T Consensus 342 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~---------~~~~~~i----~~~------- 401 (454)
T 1qcf_A 342 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN---------PEVIRAL----ERG------- 401 (454)
T ss_dssp TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---------HHHHHHH----HHT-------
T ss_pred cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH---------HHHHHHH----HcC-------
Confidence 223446789999999998899999999999999999999 9999864321 1111111 111
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccccc
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEI 730 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 730 (736)
.....+...+..+.+|+.+||+.||++|||+.+|++.|+.+....+.
T Consensus 402 -----~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~ 448 (454)
T 1qcf_A 402 -----YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATES 448 (454)
T ss_dssp -----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCC
T ss_pred -----CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcccc
Confidence 01112233456789999999999999999999999999998765544
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-37 Score=325.44 Aligned_cols=246 Identities=24% Similarity=0.361 Sum_probs=193.7
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC----CCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
+...+|.+.+.||+|+||.||+|+.. .+..||||+++.. ....+.+.+|+.++++++||||+++++++.+++..
T Consensus 46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 45677889999999999999999963 3456999999753 33456789999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~ 595 (736)
++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +..+||+|||+++......
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred EEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999999999999754 4799999999999999999999975 3478999999998775543
Q ss_pred Ccc-eeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 596 NSS-QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 596 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
... ......+|+.|+|||++.+..++.++||||||+++|||++ |..||..... ...... +...
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~---------~~~~~~----~~~~-- 270 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN---------RDVISS----VEEG-- 270 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH---------HHHHHH----HHTT--
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH---------HHHHHH----HHcC--
Confidence 222 2233456788999999998899999999999999999999 9999863321 111111 1110
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccc
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (736)
.....+...+..+.+++.+||+.||++|||+.+|++.|+.+....+
T Consensus 271 ----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 271 ----------YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp ----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred ----------CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 1112223345678899999999999999999999999999865544
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=331.46 Aligned_cols=247 Identities=26% Similarity=0.339 Sum_probs=194.9
Q ss_pred HHHHHhhhhcccccCeeceeEEEEeee------CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEEE
Q 041821 457 AELKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFCS 527 (736)
Q Consensus 457 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 527 (736)
.++...+|.+.+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|++++.++ +||||+++++++.
T Consensus 17 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 96 (359)
T 3vhe_A 17 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 96 (359)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeee
Confidence 345677899999999999999999973 236789999997643 3346789999999999 7999999999998
Q ss_pred eCC-eEEEEEecCCCCCHhhhcccCCC-----------------------------------------------------
Q 041821 528 EGR-HRLLIYEYVEKQSLDKHLFSSYF----------------------------------------------------- 553 (736)
Q Consensus 528 ~~~-~~~lv~e~~~~gsL~~~l~~~~~----------------------------------------------------- 553 (736)
+.+ ..++||||+++|+|.+++.....
T Consensus 97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (359)
T 3vhe_A 97 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDV 176 (359)
T ss_dssp STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------------
T ss_pred cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchh
Confidence 755 48999999999999999976432
Q ss_pred -------------CCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceeeccc
Q 041821 554 -------------LGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIR 604 (736)
Q Consensus 554 -------------l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~~~~ 604 (736)
+++..+..++.||++||.|||+.++ .+||+|||+++...............
T Consensus 177 ~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 256 (359)
T 3vhe_A 177 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256 (359)
T ss_dssp -------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred hhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence 8999999999999999999997643 68999999998775554444455677
Q ss_pred ccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 605 gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
||+.|+|||++.+..++.++|||||||++|||++ |+.||....... . +.. ......
T Consensus 257 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~---~~~----~~~~~~----------- 313 (359)
T 3vhe_A 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----E---FCR----RLKEGT----------- 313 (359)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-----H---HHH----HHHHTC-----------
T ss_pred CCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-----H---HHH----HHHcCC-----------
Confidence 8999999999999999999999999999999998 999986432211 0 111 111110
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
....+...+..+.+++.+||+.||++|||+.||+++|+++.+.
T Consensus 314 -~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 314 -RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 1111222345788999999999999999999999999987653
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-37 Score=343.96 Aligned_cols=245 Identities=23% Similarity=0.323 Sum_probs=199.9
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
++....+.+.++||+|+||.||+|+... +..||||+++......+.|.+|+.+|++++|||||+++++|.+.+..+|||
T Consensus 216 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp BCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred ccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 4566778899999999999999999654 889999999877667788999999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc
Q 041821 537 EYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 537 e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
||+++|+|.+++... ..+++..+..++.||++||.|||+++ ..+||+|||+++....... .
T Consensus 296 E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~ 374 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 374 (495)
T ss_dssp ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE-E
T ss_pred EccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCce-e
Confidence 999999999999753 36899999999999999999999763 3689999999987654322 1
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
......+++.|+|||++....++.++|||||||++|||++ |+.||...... .....+
T Consensus 375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~---------~~~~~~------------- 432 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---------QVYELL------------- 432 (495)
T ss_dssp CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---------GHHHHH-------------
T ss_pred ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH---------HHHHHH-------------
Confidence 1233456789999999998899999999999999999999 88888643211 111111
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
....+...+...+..+.+|+.+||+.||++|||+.+|++.|+.+.++.
T Consensus 433 ---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~ 480 (495)
T 1opk_A 433 ---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480 (495)
T ss_dssp ---HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred ---HcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence 111112223344567889999999999999999999999999986554
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=335.87 Aligned_cols=244 Identities=21% Similarity=0.296 Sum_probs=193.4
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
++....+.+.+.||+|+||.||+|+.. +++.||||.++... ...+.+.+|+++|++++||||+++++++.+.+..++
T Consensus 110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred EEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence 345677889999999999999999965 68999999997542 233568899999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCc
Q 041821 535 IYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~ 597 (736)
||||+++|+|.+++.... .+++..+..++.||++||+|||+. +..+||+|||+++........
T Consensus 190 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 999999999999997644 699999999999999999999975 347899999999865432211
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
.......+++.|+|||++.+..++.++|||||||++|||++ |..||..... .. ....+..+
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~------~~-------~~~~~~~~----- 331 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN------QQ-------TREFVEKG----- 331 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH------HH-------HHHHHHTT-----
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HH-------HHHHHHcC-----
Confidence 11122346788999999998899999999999999999998 8988864321 00 11111111
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
.....+...+..+.+|+.+||+.||++|||+.+|++.|+++..
T Consensus 332 -------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 332 -------GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp -------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 1111223345678899999999999999999999999998754
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=315.70 Aligned_cols=234 Identities=22% Similarity=0.308 Sum_probs=189.6
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
...|.+.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 35688899999999999999994 568999999986533 4466789999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+++|+|.+++... .+++..+..++.|++.||.|||+. +..+||+|||+++........ ...
T Consensus 99 ~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~ 175 (297)
T 3fxz_A 99 LAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RST 175 (297)
T ss_dssp CTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC--BCC
T ss_pred CCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc--cCC
Confidence 9999999999765 599999999999999999999975 347899999999876554332 345
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
..||+.|+|||++.+..++.++|||||||++|||++|+.||..... .... ..... .. . +
T Consensus 176 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~-~~~~~---~~----~-----~ 234 (297)
T 3fxz_A 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--------LRAL-YLIAT---NG----T-----P 234 (297)
T ss_dssp CCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHH-HHHHH---HC----S-----C
T ss_pred ccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHH-HHHHh---CC----C-----C
Confidence 6799999999999999999999999999999999999999963311 0000 00000 00 0 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
....+...+..+.+++.+||+.||++|||+.|++++
T Consensus 235 --~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 235 --ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp --CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 011122344678899999999999999999999986
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=321.49 Aligned_cols=230 Identities=21% Similarity=0.280 Sum_probs=189.3
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
..|.+.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+++|+.++||||+++++++.+.+..++|||
T Consensus 15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 94 (328)
T 3fe3_A 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME 94 (328)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEE
Confidence 4688899999999999999995 578999999996533 334568899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|+++++|.+++.....+++.++..++.||++||.|||+.+ ..+||+|||+++....... ..
T Consensus 95 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~---~~ 171 (328)
T 3fe3_A 95 YASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LD 171 (328)
T ss_dssp CCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG---GG
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc---cc
Confidence 9999999999988778999999999999999999999763 3789999999987654432 44
Q ss_pred cccccCcccChhcccCCCCc-cccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPIT-AKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~-~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
..+||+.|+|||++.+..+. .++|||||||++|||++|+.||.... ..... ..+..+.
T Consensus 172 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---------~~~~~----~~i~~~~-------- 230 (328)
T 3fe3_A 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN---------LKELR----ERVLRGK-------- 230 (328)
T ss_dssp TTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS---------HHHHH----HHHHHCC--------
T ss_pred cccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC---------HHHHH----HHHHhCC--------
Confidence 56799999999999988765 89999999999999999999997432 11111 1111111
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+...+..+.+|+.+||+.||.+|||+.|++++
T Consensus 231 -----~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 231 -----YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -----CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred -----CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01122234578899999999999999999999987
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=321.86 Aligned_cols=250 Identities=30% Similarity=0.379 Sum_probs=199.4
Q ss_pred HHHHhhhhcccccCeeceeEEEEeee------CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE 528 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 528 (736)
++...+|.+.+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+.+++++ +||||+++++++.+
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 98 (313)
T 1t46_A 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98 (313)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence 34567888999999999999999984 246789999997543 3346789999999999 89999999999999
Q ss_pred CCeEEEEEecCCCCCHhhhcccCC------------------CCCHHHHHHHHHHHHHHhhhhhcCC-------------
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSSY------------------FLGWKERFKVALGTAKGLAYLHHDE------------- 577 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~~------------------~l~~~~~~~i~~~i~~gL~yLH~~~------------- 577 (736)
++..++||||+++|+|.+++.... .+++..+..++.||++||.|||+.+
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL 178 (313)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEE
Confidence 999999999999999999997543 4899999999999999999999763
Q ss_pred ---CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccc
Q 041821 578 ---FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQ 653 (736)
Q Consensus 578 ---~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~ 653 (736)
..+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---- 254 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD---- 254 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS----
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch----
Confidence 3679999999987766544333445668889999999998899999999999999999999 99998643211
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccccc
Q 041821 654 EAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEIH 731 (736)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 731 (736)
.. ...... .. . ....+...+..+.+++.+||+.||++|||+.||+++|+++.++...+
T Consensus 255 -~~---~~~~~~----~~--------~----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 312 (313)
T 1t46_A 255 -SK---FYKMIK----EG--------F----RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 312 (313)
T ss_dssp -HH---HHHHHH----HT--------C----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTCC-
T ss_pred -hH---HHHHhc----cC--------C----CCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhhcC
Confidence 11 111110 00 0 11112223467889999999999999999999999999987765544
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-36 Score=322.96 Aligned_cols=234 Identities=23% Similarity=0.260 Sum_probs=188.9
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccc-------cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQ-------GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
..|.+.+.||+|+||.||+++.. +++.||||.++.... ..+.+.+|+.+|++++||||+++++++.+....+
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 91 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV 91 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence 56889999999999999999954 589999999965321 3567899999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC--------------------ccEEcccCcccccCC
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF--------------------EPKIADFGLAKLSQR 593 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~--------------------~~kl~DFGla~~~~~ 593 (736)
+||||+++|+|.+++.....+++..+..++.||+.||.|||+.++ .+||+|||+++....
T Consensus 92 lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~ 171 (361)
T 2yab_A 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171 (361)
T ss_dssp EEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCT
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCC
Confidence 999999999999999887889999999999999999999996521 589999999987755
Q ss_pred CCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
... .....||+.|+|||++.+..++.++|||||||++|||++|..||..... ..... .+....
T Consensus 172 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~---------~~~~~----~i~~~~- 234 (361)
T 2yab_A 172 GVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK---------QETLA----NITAVS- 234 (361)
T ss_dssp TCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH---------HHHHH----HHHTTC-
T ss_pred CCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH---------HHHHH----HHHhcC-
Confidence 332 3456799999999999999999999999999999999999999964321 01111 111110
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ..++... ...+..+.+++.+||+.||++|||+.|+++|
T Consensus 235 --~--~~~~~~~----~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 235 --Y--DFDEEFF----SQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp --C--CCCHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --C--CCCchhc----cCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 0000000 1123568899999999999999999999975
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-35 Score=308.09 Aligned_cols=264 Identities=36% Similarity=0.606 Sum_probs=209.5
Q ss_pred ccccccHHHHHHhhhhcc--------cccCeeceeEEEEeeeCCCcEEEEEEeCcc-----cccHHHHHHHHHHHhcCCC
Q 041821 450 QFRRFSYAELKKSTKSFK--------EELGRGGSGAVYKGVLADGRAVAVKRLGDL-----HQGEEVFWAEVSTIGKIYH 516 (736)
Q Consensus 450 ~~~~~~~~~i~~~~~~~~--------~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~h 516 (736)
....|++.++...+.+|. +.||+|+||.||+|+. +++.||||++... ....+.+.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 467899999999988776 4599999999999997 5789999998642 2335678999999999999
Q ss_pred CceeeEEEEEEeCCeEEEEEecCCCCCHhhhccc---CCCCCHHHHHHHHHHHHHHhhhhhcC----------------C
Q 041821 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS---SYFLGWKERFKVALGTAKGLAYLHHD----------------E 577 (736)
Q Consensus 517 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~---~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~ 577 (736)
|||+++++++.+.+..++||||+++++|.+++.. ...+++..+..++.|+++||.|||+. +
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~ 169 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA 169 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCC
Confidence 9999999999999999999999999999999864 34699999999999999999999975 3
Q ss_pred CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHH
Q 041821 578 FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAEL 657 (736)
Q Consensus 578 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~ 657 (736)
..+||+|||+++...............||+.|+|||++.+ .++.++||||||+++|||++|+.||........ .
T Consensus 170 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-----~ 243 (307)
T 2nru_A 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-----L 243 (307)
T ss_dssp CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-----T
T ss_pred CcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH-----H
Confidence 3789999999987665443333445679999999998865 489999999999999999999999975433221 1
Q ss_pred HHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 658 KRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
..+... .... ...+...+++.+ ...+...+..+.+++.+||+.||++|||+.+|+++|+++..
T Consensus 244 ~~~~~~----~~~~-~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 244 LDIKEE----IEDE-EKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp THHHHH----HHTT-SCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHH----hhhh-hhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 111111 1111 111333344433 34567788899999999999999999999999999998753
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=329.86 Aligned_cols=244 Identities=24% Similarity=0.350 Sum_probs=182.4
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC----CCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
+....|.+.+.||+|+||.||+|+.. ++..||||+++.. ....+.+.+|+.+|++++||||+++++++.+.+..
T Consensus 42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 44567888999999999999999864 4678999999753 23456799999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
++||||+++|+|.+++.... .+++.++..++.||++||.|||+.+ ..+||+|||+++......
T Consensus 122 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 99999999999999997654 7999999999999999999999763 378999999998765433
Q ss_pred Ccc-eeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 596 NSS-QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 596 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ..... .+..
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~---------~~~~~----~i~~--- 265 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---------QDVIK----AVDE--- 265 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH---------HHHHH----HHHT---
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH---------HHHHH----HHHc---
Confidence 211 1222345788999999999999999999999999999998 9999863311 11111 1111
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
......+...+..+.+++.+||+.||++||++.+|+++|+.+...
T Consensus 266 ---------~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 266 ---------GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp ---------TEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---------CCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 111112233456789999999999999999999999999987543
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=319.07 Aligned_cols=234 Identities=18% Similarity=0.254 Sum_probs=190.4
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
..|.+.+.||+|+||.||+|+.. +++.||+|.+.........+.+|+.+|+.++||||+++++++.+.+..++||||++
T Consensus 5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 84 (321)
T 1tki_A 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS 84 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC
Confidence 56888999999999999999954 58899999998766666778999999999999999999999999999999999999
Q ss_pred CCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcC------------------CCccEEcccCcccccCCCCCcceee
Q 041821 541 KQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHD------------------EFEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 541 ~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~------------------~~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+++|.+++.... .+++.++..++.||+.||.|||+. +..+||+|||+++...... ...
T Consensus 85 g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~---~~~ 161 (321)
T 1tki_A 85 GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---NFR 161 (321)
T ss_dssp CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC---EEE
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC---ccc
Confidence 999999997654 799999999999999999999965 3478999999998775543 244
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
...||+.|+|||++.+..++.++|||||||++|||++|..||..... ......+ .... . ..+
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~~i----~~~~---~--~~~ 223 (321)
T 1tki_A 162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN---------QQIIENI----MNAE---Y--TFD 223 (321)
T ss_dssp EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH---------HHHHHHH----HHTC---C--CCC
T ss_pred cccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH---------HHHHHHH----HcCC---C--CCC
Confidence 56799999999999998899999999999999999999999964321 1111111 1111 0 000
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+... ...+..+.+++.+||+.||++|||+.|++++
T Consensus 224 ~~~~----~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 224 EEAF----KEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHH----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhhh----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0000 1124578899999999999999999999986
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-36 Score=313.91 Aligned_cols=247 Identities=23% Similarity=0.275 Sum_probs=190.8
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
..+|.+.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 46788999999999999999994 45899999998432 23346788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|||+++++|.+++.....+++..+..++.|++.||.|||+.+ ..+||+|||+++........ .
T Consensus 90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~ 168 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-Q 168 (294)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--------
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc-c
Confidence 999999999999988778999999999999999999999763 36899999999876543222 2
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||...... . ......... .
T Consensus 169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--------~----~~~~~~~~~----~--- 229 (294)
T 4eqm_A 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV--------S----IAIKHIQDS----V--- 229 (294)
T ss_dssp ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH--------H----HHHHHHSSC----C---
T ss_pred cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--------H----HHHHHhhcc----C---
Confidence 34467999999999999999999999999999999999999999743210 0 000100000 0
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhccccccc
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-TMDSVVQSLLECETESE 729 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~~ 729 (736)
+..........+..+.+++.+||+.||++|| ++.++.+.|+.+..+..
T Consensus 230 --~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 230 --PNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp --CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred --CCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 0000011122346788999999999999998 99999999999865543
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-36 Score=317.97 Aligned_cols=232 Identities=22% Similarity=0.212 Sum_probs=189.9
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
...|++.+.||+|+||.||+++.. +++.||||++++. ....+.+.+|+.+|+.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 356888999999999999999954 5899999999653 23456788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|||+++|+|..++.....+++..+..++.||+.||.|||+++ ..+||+|||+++....... .
T Consensus 84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~--~ 161 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--T 161 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC--C
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC--c
Confidence 999999999999988778999999999999999999999763 3789999999986433222 2
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..... .+....
T Consensus 162 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---------~~~~~----~i~~~~------- 221 (337)
T 1o6l_A 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---------ERLFE----LILMEE------- 221 (337)
T ss_dssp BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHH----HHHHCC-------
T ss_pred ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH---------HHHHH----HHHcCC-------
Confidence 4456899999999999999999999999999999999999999963211 11111 111110
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
..++...+..+.+++.+||+.||++|| ++.||++|
T Consensus 222 ------~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 222 ------IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ------CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 012223346788999999999999999 89999876
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=335.83 Aligned_cols=245 Identities=25% Similarity=0.356 Sum_probs=192.8
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
++....+.+.++||+|+||.||+|+...+..||||+++......+.|.+|+.+|++++||||+++++++.+ +..+||||
T Consensus 180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred ccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 35567788999999999999999998878889999998766667789999999999999999999999876 67899999
Q ss_pred cCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcce
Q 041821 538 YVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~ 599 (736)
|+++|+|.+++... ..+++.++..++.||+.||+|||++++ .+||+|||+++........ .
T Consensus 259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-~ 337 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-A 337 (452)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCcee-c
Confidence 99999999999753 468999999999999999999997643 6899999999876543221 1
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||..... .... ..+..+
T Consensus 338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~---------~~~~----~~i~~~------- 397 (452)
T 1fmk_A 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVL----DQVERG------- 397 (452)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH---------HHHH----HHHHTT-------
T ss_pred ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH---------HHHH----HHHHcC-------
Confidence 233457889999999998899999999999999999999 8999864321 0111 111111
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccc
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (736)
.+...+...+..+.+++.+||+.||++|||+++|++.|+.+....+
T Consensus 398 -----~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 398 -----YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp -----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred -----CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 1112233445678999999999999999999999999999865543
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-36 Score=320.03 Aligned_cols=241 Identities=23% Similarity=0.298 Sum_probs=186.2
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCc----EEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
...+|++.+.||+|+||.||+|+.. +++ +||+|.+... ....+.+.+|+.++++++||||+++++++.++. .
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence 4567888999999999999999953 344 4688888543 345678999999999999999999999998765 7
Q ss_pred EEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
++|+||+++|+|.+++... ..+++..++.++.||++||.|||+.+ ..+||+|||+++......
T Consensus 92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 7999999999999999764 47999999999999999999999764 368999999999876554
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.........||+.|+|||++.+..++.++|||||||++|||++ |+.||...... . +..
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~---~~~------------ 230 (327)
T 3poz_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS------E---ISS------------ 230 (327)
T ss_dssp C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG------G---HHH------------
T ss_pred ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH------H---HHH------------
Confidence 4433445567889999999999999999999999999999999 99998643211 0 111
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
.+........+...+..+.+++.+||+.||++|||+.+|+++|+.+..
T Consensus 231 ----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 231 ----ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ----HHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred ----HHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 111111112233345678899999999999999999999999988754
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=324.74 Aligned_cols=249 Identities=27% Similarity=0.326 Sum_probs=194.5
Q ss_pred HHHHhhhhcccccCeeceeEEEEeee------CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE 528 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 528 (736)
++....|.+.+.||+|+||.||+|+. .++..||||++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 45567889999999999999999985 235689999997532 3346789999999999 89999999999999
Q ss_pred CCeEEEEEecCCCCCHhhhcccCC-----------------------CCCHHHHHHHHHHHHHHhhhhhcC---------
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSSY-----------------------FLGWKERFKVALGTAKGLAYLHHD--------- 576 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~~-----------------------~l~~~~~~~i~~~i~~gL~yLH~~--------- 576 (736)
.+..++||||+++|+|.+++.... .+++..+..++.||+.||.|||+.
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp 200 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAA 200 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSG
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCh
Confidence 999999999999999999997643 379999999999999999999976
Q ss_pred -------CCccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCcccc
Q 041821 577 -------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVE 648 (736)
Q Consensus 577 -------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~ 648 (736)
+..+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 33689999999987765444333445668899999999998899999999999999999998 9999864321
Q ss_pred CCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 649 DGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
. .. +.... ........+...+..+.+|+.+||+.||++|||+.+|+++|+.+....
T Consensus 281 ~-----~~---~~~~~----------------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 281 D-----AN---FYKLI----------------QNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp S-----HH---HHHHH----------------HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred H-----HH---HHHHH----------------hcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 1 00 11100 011111122233567889999999999999999999999999987654
Q ss_pred cc
Q 041821 729 EI 730 (736)
Q Consensus 729 ~~ 730 (736)
.-
T Consensus 337 ~~ 338 (344)
T 1rjb_A 337 EE 338 (344)
T ss_dssp --
T ss_pred HH
Confidence 43
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=319.53 Aligned_cols=237 Identities=22% Similarity=0.249 Sum_probs=187.5
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
..|++.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 46788999999999999999954 68999999985432 3346688999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+++++|.+++.....+++.++..++.||+.||.|||+.+ ..+||+|||+++.............
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 166 (323)
T 3tki_A 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166 (323)
T ss_dssp CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCS
T ss_pred CCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCC
Confidence 999999999988878999999999999999999999763 3789999999987654333333445
Q ss_pred ccccCcccChhcccCCCC-ccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 603 IRGTKGYMAPEWASNLPI-TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
..||+.|+|||++.+..+ +.++|||||||++|||++|+.||........ .+.. . .. .....
T Consensus 167 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-------~~~~-~----~~-----~~~~~- 228 (323)
T 3tki_A 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-------EYSD-W----KE-----KKTYL- 228 (323)
T ss_dssp CCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-------HHHH-H----HT-----TCTTS-
T ss_pred CccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-------HHHH-H----hc-----ccccC-
Confidence 679999999999987775 7899999999999999999999974322111 0000 0 00 00000
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
.........+.+|+.+||+.||++|||+.|++++-
T Consensus 229 -----~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~ 263 (323)
T 3tki_A 229 -----NPWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (323)
T ss_dssp -----TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred -----CccccCCHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence 01122345678899999999999999999998863
|
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=308.97 Aligned_cols=204 Identities=20% Similarity=0.285 Sum_probs=151.7
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCC----CceEEEeeCCcEEE--EeCCCcEEEeCCCCC---
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQ----GSRASLRRNGAMVL--TDVDDTVIWMTNTTS--- 71 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~----~~~l~l~~~G~L~l--~~~~~~~vWstn~~~--- 71 (736)
|+|+||||+ . +++|| |+ +.+ |||+||||+|+.++ +++|+|+.+|+|+| .|++|.+||+|+++.
T Consensus 34 g~F~lgf~~-~-~~~~l---y~--~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~G~Lvl~~~~~~~~~vWst~~~~~~~ 105 (276)
T 3m7h_A 34 QRFKLLLQG-D-GNLVI---QD--NGA-TVWVANEQQPFSSTIPLRNKKAPLAFYVQYGAFLDDYSRRRVWLTDNSTFTS 105 (276)
T ss_dssp SSEEEEECT-T-SCEEE---EE--TTE-EEEECSTTSTTEEEEECCCTTCCSEEEESSSEEEEEGGGTEEEEECCCCCCC
T ss_pred CcEEEEEEC-C-CCeEE---EC--CCC-eEEECCCCCCcCCcccccceEEEEeCCCcEEEEEeCCCCCEEEEeCCCcccc
Confidence 789999994 3 35676 76 777 99999999999764 78999999999999 888899999999864
Q ss_pred ---CCcceEEEccCCCeEEEccCCceeeeecCCCCCccCCCcc----cCCCceEEecCCCCCCCCCcceEEEcCCCceEE
Q 041821 72 ---TGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQV----FRKSTKLISGVGNGTYASGYFSLYFDNDNVLRL 144 (736)
Q Consensus 72 ---~~~~~a~LldsGNlVl~~~~~~~lWqSFd~PTDTlLpg~~----l~~~~~L~S~~s~~d~s~G~~~l~~~~~g~~~~ 144 (736)
.++..|+|+|+|||||+| +.+|||| |||||+||||+ |..+.+| ++.+||++|.|++.++++|.+.+
T Consensus 106 ~~~~~~~~a~L~d~GNlVl~~--~~~lWqS--~ptdtlLpg~~~~~~l~~g~~L---~S~~dps~G~fsl~l~~dGnlvL 178 (276)
T 3m7h_A 106 NDQWNRTHLVLQDDGNIVLVD--SLALWNG--TPAIPLVPGAIDSLLLAPGSEL---VQGVVYGAGASKLVFQGDGNLVA 178 (276)
T ss_dssp TTHHHHEEEEECTTSCEEEEE--EEEEEES--CTTSCCCCSCTTCEEECSSEEE---CTTCEEEETTEEEEECTTSCEEE
T ss_pred cccCCceEEEEeCCCCEEecC--CceeeCc--ccccccccccccccccccCccc---ccCCCCCCceEEEeecCCceEEE
Confidence 235689999999999998 7899999 99999999999 7778888 56789999999999999998766
Q ss_pred EecCCCccceecCCCCCCccccCcccccccceEeecCCCccccC--CceEEEEeecCCceEEEEEEccCccEEEEEecCC
Q 041821 145 IYDGPEISSVYWPDPDFDVFQNGRTKYNSSRIAVLDDFGSFSSS--DELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKV 222 (736)
Q Consensus 145 ~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~rl~l~~~G~l~~~~w~~~ 222 (736)
+..+ ...||+++..+.. . ....+...|.+... +...+-.+.......+|++|+.||+|++|.|
T Consensus 179 y~~~---~~~yW~Sgt~~~~--------~-~~l~l~~dGnLvl~d~~~~~vWsS~t~~~~~~rl~Ld~dGnLvly~~--- 243 (276)
T 3m7h_A 179 YGPN---GAATWNAGTQGKG--------A-VRAVFQGDGNLVVYGAGNAVLWHSHTGGHASAVLRLQANGSIAILDE--- 243 (276)
T ss_dssp ECTT---SSEEEECCCTTTT--------C-CEEEECTTSCEEEECTTSCEEEECSCTTCTTCEEEECTTSCEEEEEE---
T ss_pred EeCC---CeEEEECCCCCCc--------c-EEEEEcCCCeEEEEeCCCcEEEEecCCCCCCEEEEEcCCccEEEEcC---
Confidence 4332 4689988754321 1 12233334433211 1111111111122347999999999999998
Q ss_pred CCceEEEeeecc
Q 041821 223 TGSWMISWQALM 234 (736)
Q Consensus 223 ~~~W~~~~~~p~ 234 (736)
...|...+.+|.
T Consensus 244 ~~~Wqsf~~~P~ 255 (276)
T 3m7h_A 244 KPVWARFGFQPT 255 (276)
T ss_dssp EEEEESSSCCTT
T ss_pred CCeEEccCccCC
Confidence 234666555554
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=327.20 Aligned_cols=244 Identities=25% Similarity=0.289 Sum_probs=195.9
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC--------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA--------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFC 526 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 526 (736)
++...+|.+.+.||+|+||.||+|+.. .+..||||+++... ...+.+.+|+++++++ +||||+++++++
T Consensus 65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 455678889999999999999999842 23579999997643 3346789999999999 899999999999
Q ss_pred EeCCeEEEEEecCCCCCHhhhcccCC----------------CCCHHHHHHHHHHHHHHhhhhhcCC-------------
Q 041821 527 SEGRHRLLIYEYVEKQSLDKHLFSSY----------------FLGWKERFKVALGTAKGLAYLHHDE------------- 577 (736)
Q Consensus 527 ~~~~~~~lv~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~i~~gL~yLH~~~------------- 577 (736)
.+++..++||||+++|+|.+++.... .+++.++..++.||+.||.|||+.+
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 224 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEE
Confidence 99999999999999999999997643 4899999999999999999999763
Q ss_pred ---CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccc
Q 041821 578 ---FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQ 653 (736)
Q Consensus 578 ---~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~ 653 (736)
..+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~------ 298 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------ 298 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC------
Confidence 3789999999987765443333445668899999999999999999999999999999999 999986331
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 654 EAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
...+.. .+..+ .....+...+..+.+++.+||+.||++|||+.||+++|+.+..
T Consensus 299 ---~~~~~~----~~~~~------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 299 ---VEELFK----LLKEG------------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp ---HHHHHH----HHHTT------------CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHHHH----HHHcC------------CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111111 11111 0111122334678899999999999999999999999998754
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=310.25 Aligned_cols=242 Identities=23% Similarity=0.317 Sum_probs=196.4
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
....|.+.+.||+|+||.||+|+..+++.||+|++.......+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 34678889999999999999999888889999999877667788999999999999999999999999999999999999
Q ss_pred CCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcceeec
Q 041821 540 EKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 540 ~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
++++|.+++... ..+++..+..++.|+++||.|||+.++ .+||+|||+++....... .....
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~ 164 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTG 164 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH-HSTTS
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccccc-ccccc
Confidence 999999999765 468999999999999999999997643 689999999986643211 11233
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
..+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ..... .+..+.
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---------~~~~~----~i~~~~--------- 222 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN---------SEVVE----DISTGF--------- 222 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---------HHHHH----HHHTTC---------
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH---------HHHHH----HHhcCC---------
Confidence 457789999999998889999999999999999999 8888863211 11111 111110
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
....+...+..+.+++.+||+.||++|||+.+++++|+++.+.
T Consensus 223 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 223 ---RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp ---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---cCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0111222345788999999999999999999999999988653
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-37 Score=330.71 Aligned_cols=246 Identities=24% Similarity=0.337 Sum_probs=195.1
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeC
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG 529 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 529 (736)
++....|.+.+.||+|+||.||+|+.. +++.||||+++.. ......+.+|+.++++++||||+++++++.+.
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 146 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 445677889999999999999999943 3668999999653 34456788999999999999999999999999
Q ss_pred CeEEEEEecCCCCCHhhhcccC-------CCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEc
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSS-------YFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIA 583 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~-------~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~ 583 (736)
...++||||+++|+|.+++... ..+++.+++.++.||++||.|||+.++ .+||+
T Consensus 147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 9999999999999999999753 258999999999999999999997633 48999
Q ss_pred ccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHH
Q 041821 584 DFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVR 662 (736)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 662 (736)
|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |..||..... .....
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~---------~~~~~ 297 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QEVLE 297 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---------HHHHH
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH---------HHHHH
Confidence 9999986543322222345668999999999999999999999999999999998 9999864311 11111
Q ss_pred HHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 663 EVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
.+..+. ....+...+..+.+|+.+||+.||++|||+.+|+++|+.+..+.
T Consensus 298 ----~i~~~~------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 298 ----FVTSGG------------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp ----HHHTTC------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred ----HHHcCC------------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 111110 11122233457889999999999999999999999999876543
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=312.76 Aligned_cols=244 Identities=23% Similarity=0.290 Sum_probs=192.5
Q ss_pred ccccHHHHHHhh------------hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc-cccHHHHHHHHHHHhcCCCC
Q 041821 452 RRFSYAELKKST------------KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL-HQGEEVFWAEVSTIGKIYHM 517 (736)
Q Consensus 452 ~~~~~~~i~~~~------------~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~ 517 (736)
..+++.+++.+. +...+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 456666666554 445668999999999999965 6999999999653 34567789999999999999
Q ss_pred ceeeEEEEEEeCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccE
Q 041821 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPK 581 (736)
Q Consensus 518 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~k 581 (736)
||+++++++...+..++||||+++++|.+++.. ..+++..+..++.|+++||.|||+. +..+|
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~k 181 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVK 181 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEE
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEE
Confidence 999999999999999999999999999999865 4699999999999999999999975 34789
Q ss_pred EcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHH
Q 041821 582 IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFV 661 (736)
Q Consensus 582 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~ 661 (736)
|+|||+++........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ....
T Consensus 182 l~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~---------~~~~ 250 (321)
T 2c30_A 182 LSDFGFCAQISKDVPK--RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP---------VQAM 250 (321)
T ss_dssp ECCCTTCEECCSSSCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---------HHHH
T ss_pred EeeeeeeeecccCccc--cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HHHH
Confidence 9999999876543222 3456799999999999999999999999999999999999999963311 0111
Q ss_pred HHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 662 REVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
... ... ..+.+. .....+..+.+++.+||+.||++|||+.+++++-
T Consensus 251 ~~~----~~~--------~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp 296 (321)
T 2c30_A 251 KRL----RDS--------PPPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLDHP 296 (321)
T ss_dssp HHH----HHS--------SCCCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred HHH----hcC--------CCCCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 111 110 111111 1122345788999999999999999999999863
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-36 Score=320.99 Aligned_cols=247 Identities=24% Similarity=0.315 Sum_probs=194.1
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR 530 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 530 (736)
+....|.+.+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|+.++++++||||+++++++.+++
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34567888999999999999999964 34789999997543 33567899999999999999999999999999
Q ss_pred eEEEEEecCCCCCHhhhcccC------------------------CCCCHHHHHHHHHHHHHHhhhhhcCCC--------
Q 041821 531 HRLLIYEYVEKQSLDKHLFSS------------------------YFLGWKERFKVALGTAKGLAYLHHDEF-------- 578 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~------------------------~~l~~~~~~~i~~~i~~gL~yLH~~~~-------- 578 (736)
..++||||+++|+|.+++... ..+++.+++.++.||++||.|||+.++
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~ 203 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATR 203 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcc
Confidence 999999999999999999753 468999999999999999999997643
Q ss_pred --------ccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccC
Q 041821 579 --------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVED 649 (736)
Q Consensus 579 --------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~ 649 (736)
.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 204 NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~- 282 (343)
T 1luf_A 204 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH- 282 (343)
T ss_dssp GEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-
T ss_pred eEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh-
Confidence 689999999987654332222344568999999999998899999999999999999999 9999863311
Q ss_pred CccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccc
Q 041821 650 GEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729 (736)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (736)
.... ..+..+. . ...+...+..+.+++.+||+.||++|||+.+|+++|+++.+..+
T Consensus 283 --------~~~~----~~~~~~~---~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 283 --------EEVI----YYVRDGN---I---------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp --------HHHH----HHHHTTC---C---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred --------HHHH----HHHhCCC---c---------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 1111 1111111 0 11222334678899999999999999999999999999987655
Q ss_pred c
Q 041821 730 I 730 (736)
Q Consensus 730 ~ 730 (736)
-
T Consensus 339 ~ 339 (343)
T 1luf_A 339 G 339 (343)
T ss_dssp -
T ss_pred h
Confidence 4
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-36 Score=322.36 Aligned_cols=237 Identities=22% Similarity=0.202 Sum_probs=180.5
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
..+|.+.+.||+|+||.||+++.. +++.||||++.......+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 356889999999999999999954 6899999999766555677889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC------------------ccEEcccCcccccCCCCCcceee
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF------------------EPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~------------------~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
++|+|.+++.....+++..+..++.|+++||.|||+.++ .+||+|||+++...... ...
T Consensus 99 ~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~---~~~ 175 (361)
T 3uc3_A 99 SGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS---QPK 175 (361)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------------
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC---CCC
Confidence 999999999877789999999999999999999997643 38999999997543322 134
Q ss_pred cccccCcccChhcccCCCCccc-cceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAK-VDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~-~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...||+.|+|||++.+..++.+ +|||||||++|||++|+.||........ ....... +.
T Consensus 176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-----~~~~~~~----~~----------- 235 (361)
T 3uc3_A 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-----YRKTIQR----IL----------- 235 (361)
T ss_dssp -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-----HHHHHHH----HH-----------
T ss_pred CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-----HHHHHHH----Hh-----------
Confidence 4679999999999988887655 9999999999999999999975432211 1111111 11
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
............+..+.+|+.+||+.||++|||+.|+++|
T Consensus 236 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 236 SVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp TTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 1111111111224578899999999999999999999986
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=320.58 Aligned_cols=236 Identities=22% Similarity=0.268 Sum_probs=190.6
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
....|.+.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3567899999999999999999954 58999999996532 2345688999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCcccccCCCCC
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~~~~~~~~ 596 (736)
|||+++|+|.+++.....+++..+..++.||+.||.|||+.++ .+||+|||+++.......
T Consensus 107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~ 186 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186 (362)
T ss_dssp ECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc
Confidence 9999999999999888889999999999999999999997633 489999999987654332
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
.....||+.|+|||++.+..++.++|||||||++|||++|..||..... ..+... +..+. .
T Consensus 187 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~---------~~~~~~----i~~~~---~ 247 (362)
T 2bdw_A 187 ---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ---------HRLYAQ----IKAGA---Y 247 (362)
T ss_dssp ---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHH----HHHTC---C
T ss_pred ---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---------HHHHHH----HHhCC---C
Confidence 3456799999999999999999999999999999999999999963211 111111 11111 0
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.... ......+..+.+|+.+||+.||++|||+.+++++
T Consensus 248 -~~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 248 -DYPS-----PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -CCCT-----TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -CCCc-----ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 0011234578899999999999999999999876
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=318.82 Aligned_cols=244 Identities=24% Similarity=0.315 Sum_probs=195.2
Q ss_pred HHHhhhhcccccCeeceeEEEEeee------CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR 530 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 530 (736)
+....|.+.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 3456788899999999999999984 235789999997533 33467899999999999999999999999999
Q ss_pred eEEEEEecCCCCCHhhhcccCC------------------------CCCHHHHHHHHHHHHHHhhhhhcCC---------
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSY------------------------FLGWKERFKVALGTAKGLAYLHHDE--------- 577 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~------------------------~l~~~~~~~i~~~i~~gL~yLH~~~--------- 577 (736)
..++||||+++++|.+++.... .+++.++..++.||++||.|||+.+
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~ 179 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAAR 179 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchh
Confidence 9999999999999999997643 3889999999999999999999763
Q ss_pred -------CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccC
Q 041821 578 -------FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVED 649 (736)
Q Consensus 578 -------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~ 649 (736)
..+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 180 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 259 (314)
T 2ivs_A 180 NILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259 (314)
T ss_dssp GEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 3689999999987755443333344567889999999998889999999999999999999 99998643211
Q ss_pred CccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 650 GEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
..... +... .....+...+..+.+++.+||+.||++|||+.+|+++|+++..+
T Consensus 260 ---------~~~~~----~~~~------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 260 ---------RLFNL----LKTG------------HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp ---------GHHHH----HHTT------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---------HHHHH----hhcC------------CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 01111 1110 01112223456788999999999999999999999999987654
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=327.51 Aligned_cols=236 Identities=20% Similarity=0.234 Sum_probs=189.3
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
...|.+.+.||+|+||.||+|.. .+++.+|+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 46789999999999999999984 568999999996533 33456889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC-------------------CccEEcccCcccccCCCCCc
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE-------------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-------------------~~~kl~DFGla~~~~~~~~~ 597 (736)
||+++|+|.+.+.....+++..+..++.||+.||.|||+.+ ..+||+|||+++.......
T Consensus 90 E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~- 168 (444)
T 3soa_A 90 DLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ- 168 (444)
T ss_dssp CCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC-
T ss_pred EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc-
Confidence 99999999999988888999999999999999999999753 3589999999987654432
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
......||+.|+|||++.+..++.++|||||||++|||++|..||..... ...... +..+. .
T Consensus 169 -~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~---------~~~~~~----i~~~~----~ 230 (444)
T 3soa_A 169 -AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ---------HRLYQQ----IKAGA----Y 230 (444)
T ss_dssp -BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH---------HHHHHH----HHHTC----C
T ss_pred -eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH---------HHHHHH----HHhCC----C
Confidence 23456799999999999999999999999999999999999999963211 111111 11111 0
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
....+ .....+..+.+|+.+||+.||++|||+.|++++
T Consensus 231 ~~~~~-----~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 231 DFPSP-----EWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp CCCTT-----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCcc-----ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00011 111234578899999999999999999999986
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=315.97 Aligned_cols=235 Identities=25% Similarity=0.257 Sum_probs=189.0
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc-------ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH-------QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
...|.+.+.||+|+||.||+++.. +++.||||.+.... ...+.+.+|+.+|++++||||+++++++.+....
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 467889999999999999999954 58999999986432 1357789999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC--------------------ccEEcccCcccccC
Q 041821 533 LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF--------------------EPKIADFGLAKLSQ 592 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~--------------------~~kl~DFGla~~~~ 592 (736)
++||||+++++|.+++.....+++..+..++.||+.||.|||+.++ .+||+|||+++...
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~ 169 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred EEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence 9999999999999999887789999999999999999999996521 58999999998775
Q ss_pred CCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhc
Q 041821 593 RGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (736)
.... .....||+.|+|||++.+..++.++|||||||++|||++|..||..... ......+. ...
T Consensus 170 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~~~~----~~~ 233 (326)
T 2y0a_A 170 FGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK---------QETLANVS----AVN 233 (326)
T ss_dssp TTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH---------HHHHHHHH----HTC
T ss_pred CCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH---------HHHHHHHH----hcC
Confidence 4332 3446799999999999999999999999999999999999999964311 01111111 000
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.. ..... ....+..+.+++.+||+.||++|||+.|++++
T Consensus 234 ----~~-~~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 234 ----YE-FEDEY----FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp ----CC-CCHHH----HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ----CC-cCccc----cccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 00000 01123568899999999999999999999986
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=316.87 Aligned_cols=258 Identities=22% Similarity=0.285 Sum_probs=191.5
Q ss_pred HHHHhhhhcccccCeeceeEEEEeee-----CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEe--C
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVL-----ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE--G 529 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~ 529 (736)
++...+|++.+.||+|+||.||+|++ .+++.||||++.... ...+.+.+|+.++++++||||+++++++.. .
T Consensus 6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred cCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 34567889999999999999999984 357899999997644 344678999999999999999999999865 3
Q ss_pred CeEEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccC
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQ 592 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~ 592 (736)
...++||||+++++|.+++.... .+++..+..++.|++.||.|||+.++ .+||+|||+++...
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred CceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 56899999999999999997654 59999999999999999999997643 68999999998765
Q ss_pred CCCCcc-eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCcc---chhHHHHHHHHHHHHH
Q 041821 593 RGSNSS-QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEG---QEAELKRFVREVKRKI 668 (736)
Q Consensus 593 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~ 668 (736)
...... ......++..|+|||++.+..++.++||||||+++|||++|..|+......... .............
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 242 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI--- 242 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH---
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH---
Confidence 433221 123345778899999999999999999999999999999999988633110000 0000000001111
Q ss_pred hhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 669 LYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 669 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
+.+........+...+..+.+++.+||+.||++|||+.||+++|+.+.++
T Consensus 243 ---------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 243 ---------ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp ---------HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---------HHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 11111112223334457889999999999999999999999999988654
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-36 Score=331.37 Aligned_cols=236 Identities=25% Similarity=0.331 Sum_probs=190.1
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC-eEEEEEe
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR-HRLLIYE 537 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e 537 (736)
+....+.+.+.||+|+||.||+|... ++.||||+++... ..+.|.+|+.+|++++||||+++++++.+.+ ..+||||
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred cChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 44567888899999999999999984 7899999997644 4567899999999999999999999988765 7899999
Q ss_pred cCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcce
Q 041821 538 YVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~ 599 (736)
||++|+|.+++.... .+++..+..++.||++||+|||++ +..+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----- 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----- 342 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-----
Confidence 999999999998644 479999999999999999999975 337899999999855332
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||....... ... .+..+
T Consensus 343 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---------~~~----~i~~~------- 402 (450)
T 1k9a_A 343 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---------VVP----RVEKG------- 402 (450)
T ss_dssp ----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---------HHH----HHHTT-------
T ss_pred ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---------HHH----HHHcC-------
Confidence 122357889999999999999999999999999999998 999987432111 111 11111
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
.+...+...+..+.+|+.+||+.||++|||+.+|++.|+.+..
T Consensus 403 -----~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 403 -----YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 1112233445688999999999999999999999999998754
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-36 Score=309.92 Aligned_cols=234 Identities=24% Similarity=0.328 Sum_probs=178.6
Q ss_pred HhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc-----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH-----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
...|.+.+.||+|+||.||+|+.. ++.||||++.... ...+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 456788899999999999999974 8899999986532 2346788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC---------------------------CccEEcccCcc
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE---------------------------FEPKIADFGLA 588 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~---------------------------~~~kl~DFGla 588 (736)
|||+++++|.+++.. ..+++..+..++.|+++||.|||+++ ..+||+|||++
T Consensus 85 ~e~~~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~ 163 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163 (271)
T ss_dssp EECCTTEEHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred EEcCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence 999999999999864 46999999999999999999999764 23899999999
Q ss_pred cccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHH
Q 041821 589 KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKI 668 (736)
Q Consensus 589 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (736)
+...... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .... .
T Consensus 164 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---------~~~~----~- 225 (271)
T 3dtc_A 164 REWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL---------AVAY----G- 225 (271)
T ss_dssp ----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH---------HHHH----H-
T ss_pred ccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---------HHHH----h-
Confidence 8664432 22456899999999999989999999999999999999999999643210 0000 0
Q ss_pred hhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 669 LYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 669 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
..........+...+..+.+++.+||+.||++|||+.|++++|+++
T Consensus 226 ----------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 226 ----------VAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ----------HHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ----------hhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0011111122333456788999999999999999999999999864
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=307.58 Aligned_cols=259 Identities=19% Similarity=0.238 Sum_probs=197.7
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC--eEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR--HRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 536 (736)
..|.+.+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|+++|++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 56888999999999999999954 48999999997533 44577889999999999999999999998765 789999
Q ss_pred ecCCCCCHhhhcccCC---CCCHHHHHHHHHHHHHHhhhhhcCCC--------------------ccEEcccCcccccCC
Q 041821 537 EYVEKQSLDKHLFSSY---FLGWKERFKVALGTAKGLAYLHHDEF--------------------EPKIADFGLAKLSQR 593 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~---~l~~~~~~~i~~~i~~gL~yLH~~~~--------------------~~kl~DFGla~~~~~ 593 (736)
||+++++|.+++.... .+++.++..++.||++||.|||+.++ .+||+|||+++....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 9999999999997644 39999999999999999999997632 379999999987755
Q ss_pred CCCcceeecccccCcccChhccc--------CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWAS--------NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK 665 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (736)
... .....||+.|+|||++. +..++.++|||||||++|||++|+.||........ .......+.
T Consensus 169 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-----~~~~~~~~~ 240 (319)
T 4euu_A 169 DEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR-----NKEVMYKII 240 (319)
T ss_dssp TCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG-----CHHHHHHHH
T ss_pred CCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch-----hHHHHHHHh
Confidence 432 34467999999999986 56789999999999999999999999964322111 111222222
Q ss_pred HHHhhhccccccccc--------cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 666 RKILYEEEAWIEEIV--------DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 666 ~~~~~~~~~~~~~~~--------d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
..........+.... +.......+......+.+++.+||+.||++|||++|++++..+.....
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~~ 311 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRG 311 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC--
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhcC
Confidence 211111000000000 011122456778889999999999999999999999999998765433
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-36 Score=313.00 Aligned_cols=244 Identities=23% Similarity=0.332 Sum_probs=199.3
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
++...+|.+.+.||+|+||.||+|+... +..||||.+.......+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 4566788899999999999999999654 889999999877667788999999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcc
Q 041821 537 EYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~ 598 (736)
||+++++|.+++.... .+++..+..++.|++.||.|||+.++ .+||+|||+++....... .
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~ 167 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 167 (288)
T ss_dssp ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS-E
T ss_pred EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc-c
Confidence 9999999999997643 59999999999999999999996533 689999999987654432 2
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
......+|+.|+|||++.+..++.++||||||+++|||++ |..||...... ......
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~---------~~~~~~------------- 225 (288)
T 3kfa_A 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---------QVYELL------------- 225 (288)
T ss_dssp EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---------GHHHHH-------------
T ss_pred cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---------HHHHHH-------------
Confidence 2344567889999999998899999999999999999999 88888643211 111111
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
........+...+..+.+++.+||+.||++|||+.+|++.|+.+.++
T Consensus 226 ---~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 226 ---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp ---HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---hccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 01111122233346788999999999999999999999999987654
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=317.85 Aligned_cols=237 Identities=20% Similarity=0.299 Sum_probs=183.6
Q ss_pred HhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCC--CceeeEEEEEEeCCeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYH--MNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv 535 (736)
...|.+.+.||+|+||.||++...+++.||||++.... ...+.+.+|+.+|++++| |||+++++++.++...+||
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 34678899999999999999998889999999986432 334678899999999986 9999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC---------------ccEEcccCcccccCCCCCccee
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF---------------EPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|| +.+++|.+++.....+++.++..++.||+.||.|||+.++ .+||+|||+++...........
T Consensus 88 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~ 166 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVK 166 (343)
T ss_dssp EC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCCC---------
T ss_pred Ee-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEeecccccccCcccccccC
Confidence 99 5678999999988889999999999999999999997643 6899999999877654433334
Q ss_pred ecccccCcccChhcccC-----------CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 601 SQIRGTKGYMAPEWASN-----------LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ... .
T Consensus 167 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~----~------ 229 (343)
T 3dbq_A 167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QIS----K------ 229 (343)
T ss_dssp ---CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHH----H------
T ss_pred CCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-------HHH----H------
Confidence 45679999999999864 6789999999999999999999999963211 000 0
Q ss_pred hhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 670 YEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 670 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
+..++++......+......+.+|+.+||+.||++|||+.|++++.
T Consensus 230 ------~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 230 ------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp ------HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ------HHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 1111222222222323345788999999999999999999999874
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-35 Score=317.99 Aligned_cols=242 Identities=19% Similarity=0.188 Sum_probs=187.4
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccc----cHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQ----GEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 533 (736)
...+|++.+.||+|+||.||+|+.. +++.||||++++... ..+.+.+|..+|.++ +||||+++++++.+.+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 3457889999999999999999954 578999999975422 224578899999887 8999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
|||||+++|+|..++.....+++..+..++.||+.||.|||+.+ ..+||+|||+++.......
T Consensus 130 lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~- 208 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD- 208 (396)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC-
T ss_pred EEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCC-
Confidence 99999999999999988778999999999999999999999763 3789999999986333222
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||.............. ....+.+...
T Consensus 209 -~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~----~~~~~~i~~~------ 277 (396)
T 4dc2_A 209 -TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE----DYLFQVILEK------ 277 (396)
T ss_dssp -CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCH----HHHHHHHHHC------
T ss_pred -ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhH----HHHHHHHhcc------
Confidence 24567899999999999999999999999999999999999999964322111000000 1111111111
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHH
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM------DSVVQS 720 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 720 (736)
. ..++...+..+.+|+.+||+.||++||++ .||++|
T Consensus 278 -----~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 278 -----Q--IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp -----C--CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred -----c--cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 0 11223345678899999999999999985 677664
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-35 Score=307.57 Aligned_cols=246 Identities=24% Similarity=0.312 Sum_probs=185.0
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhc--CCCCceeeEEEEEEeC----CeEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGK--IYHMNLVRMWGFCSEG----RHRL 533 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~~~~ 533 (736)
...+|.+.+.||+|+||.||+|+. +++.||||++.... ...+..|.+++.. ++||||+++++++... ...+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 356788999999999999999998 68999999996543 3445556665555 8999999999987653 4579
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhh--------cC----------------CCccEEcccCccc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH--------HD----------------EFEPKIADFGLAK 589 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH--------~~----------------~~~~kl~DFGla~ 589 (736)
+||||+++|+|.+++.. ..+++..+..++.|+++||.||| +. +..+||+|||+++
T Consensus 83 lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 161 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 161 (301)
T ss_dssp EEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCee
Confidence 99999999999999954 46999999999999999999999 54 3478999999998
Q ss_pred ccCCCCCcc--eeecccccCcccChhcccCC------CCccccceechhHHHHHHHhC----------CCCCCccccCCc
Q 041821 590 LSQRGSNSS--QFSQIRGTKGYMAPEWASNL------PITAKVDVYSYGVVILEMVKG----------IRLSNWVVEDGE 651 (736)
Q Consensus 590 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwS~Gvvl~el~tg----------~~p~~~~~~~~~ 651 (736)
......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~ 241 (301)
T 3q4u_A 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241 (301)
T ss_dssp EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc
Confidence 765443321 12234799999999999876 566899999999999999999 777764433222
Q ss_pred cchhHHHHHHHHHHHHHhhhccccccccccCccC-CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 652 GQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK-GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.. ... .... ......+.+. ...+...+..+.+++.+||+.||++|||+.+|++.|+++
T Consensus 242 ~~----~~~----~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 242 SF----EDM----RKVV-------CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CH----HHH----HHHH-------TTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ch----hhh----hHHH-------hccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 10 001 1100 0011111111 112335678899999999999999999999999999876
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-36 Score=339.18 Aligned_cols=246 Identities=25% Similarity=0.351 Sum_probs=197.8
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
++....+.+.++||+|+||.||+|+...+..||||+++......+.|.+|+++|++++||||+++++++.+ +..+||||
T Consensus 263 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred ecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 45667788999999999999999998878889999998766667789999999999999999999999876 67899999
Q ss_pred cCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcce
Q 041821 538 YVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~ 599 (736)
|+++|+|.++|... ..+++.++..|+.||++||.|||++++ .+||+|||+++....... ..
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~ 420 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TA 420 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH-HT
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce-ec
Confidence 99999999999753 468999999999999999999997643 689999999987643211 11
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....++..|+|||++....++.++|||||||+||||++ |+.||..... .... ..+..+
T Consensus 421 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~---------~~~~----~~i~~~------- 480 (535)
T 2h8h_A 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVL----DQVERG------- 480 (535)
T ss_dssp TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH---------HHHH----HHHHTT-------
T ss_pred ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---------HHHH----HHHHcC-------
Confidence 223456789999999998899999999999999999999 8989864321 0111 111111
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccccc
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEI 730 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 730 (736)
.+...+...+..+.+||.+||+.||++|||+.+|+++|+.+....+-
T Consensus 481 -----~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~ 527 (535)
T 2h8h_A 481 -----YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527 (535)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred -----CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCc
Confidence 11112233456788999999999999999999999999998665443
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=322.04 Aligned_cols=235 Identities=20% Similarity=0.303 Sum_probs=183.5
Q ss_pred hhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCC--CCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIY--HMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|.+.+.||+|+||.||++...+++.||||++.... ...+.+.+|+.+|++++ ||||+++++++...+..+|||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4588899999999999999998779999999985432 34467899999999996 599999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC---------------ccEEcccCcccccCCCCCcceee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF---------------EPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
| +.+++|.+++.....+++.++..++.||+.||.|||+.++ .+||+|||+++.+..........
T Consensus 136 E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~ 214 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD 214 (390)
T ss_dssp E-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECCCSSSCCC---------C
T ss_pred e-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEecCccccccCCCccccCC
Confidence 9 5689999999888889999999999999999999997643 68999999998775543332344
Q ss_pred cccccCcccChhcccC-----------CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhh
Q 041821 602 QIRGTKGYMAPEWASN-----------LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILY 670 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~-----------~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (736)
..+||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...
T Consensus 215 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-------~~~----------- 276 (390)
T 2zmd_A 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-------ISK----------- 276 (390)
T ss_dssp CSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-------HHH-----------
T ss_pred CCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-------HHH-----------
Confidence 5679999999999875 36899999999999999999999999632110 000
Q ss_pred hccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 671 EEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 671 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+..++++......+......+.+|+.+||+.||++|||+.||+++
T Consensus 277 -----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 277 -----LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp -----HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----HHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 111122222112222224578899999999999999999999976
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-36 Score=312.69 Aligned_cols=246 Identities=22% Similarity=0.352 Sum_probs=187.8
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCC-C-------cEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-G-------RAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE 528 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~-------~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 528 (736)
++...+|.+.+.||+|+||.||+|+... + ..||+|++.... ...+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (289)
T 4fvq_A 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83 (289)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence 3456788899999999999999998543 3 479999997543 456779999999999999999999999999
Q ss_pred CCeEEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC----------------c--------cEEc
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF----------------E--------PKIA 583 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~--------~kl~ 583 (736)
++..++||||+++++|.+++.... .+++..+..++.||+.||.|||++++ . +||+
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 999999999999999999998765 49999999999999999999997643 2 8999
Q ss_pred ccCcccccCCCCCcceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHH
Q 041821 584 DFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR 662 (736)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 662 (736)
|||++..... .....||+.|+|||++.+ ..++.++||||||+++|||++|..|+...... . ....
T Consensus 164 Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~-----~---~~~~ 229 (289)
T 4fvq_A 164 DPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS-----Q---RKLQ 229 (289)
T ss_dssp CCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----H---HHHH
T ss_pred cCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch-----H---HHHH
Confidence 9999975532 234568999999999987 67999999999999999999966554422110 0 0000
Q ss_pred HHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccccccccCC
Q 041821 663 EVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEIHITDD 735 (736)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~ 735 (736)
.. .. . .. .+...+..+.+++.+||+.||++|||+.+++++|+++..........+
T Consensus 230 ~~----~~-----~-----~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~~~~ 284 (289)
T 4fvq_A 230 FY----ED-----R-----HQ----LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGSH 284 (289)
T ss_dssp HH----HT-----T-----CC----CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----------
T ss_pred Hh----hc-----c-----CC----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCCCcc
Confidence 00 00 0 00 011113457889999999999999999999999999987666554433
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=314.29 Aligned_cols=229 Identities=18% Similarity=0.212 Sum_probs=187.4
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|.+.+.||+|+||.||+|+. .+++.||||++.... .....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4688899999999999999995 568999999996432 23356889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
||+ +|+|.+++.....+++.++..++.||+.||.|||+. +..+||+|||+++....... .
T Consensus 89 E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~---~ 164 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF---L 164 (336)
T ss_dssp CCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT---T
T ss_pred ECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc---c
Confidence 999 789999998777899999999999999999999965 34789999999987654332 3
Q ss_pred ecccccCcccChhcccCCCC-ccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPI-TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
...+||+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ...+
T Consensus 165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~------------------------~~~i 220 (336)
T 3h4j_B 165 KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL------------------------FKKV 220 (336)
T ss_dssp CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC------------------------BCCC
T ss_pred ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH------------------------HHHH
Confidence 45679999999999988776 7899999999999999999999974322111 1111
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.... ...+...+..+.+|+.+||+.||.+|||+.|++++
T Consensus 221 ~~~~--~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 221 NSCV--YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CSSC--CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred HcCC--CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 1111 11233345678899999999999999999999875
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=305.41 Aligned_cols=235 Identities=23% Similarity=0.289 Sum_probs=187.4
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC--CeEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG--RHRLL 534 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 534 (736)
...+|.+.+.||+|+||.||+|+.. ++.||||+++... ...+.+.+|+.++++++||||+++++++.+. ...++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 4467888999999999999999984 8899999997543 3346789999999999999999999999887 78899
Q ss_pred EEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC--C----------------ccEEcccCcccccCCC
Q 041821 535 IYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE--F----------------EPKIADFGLAKLSQRG 594 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~--~----------------~~kl~DFGla~~~~~~ 594 (736)
||||+++|+|.+++.... .+++..+..++.|+++||.|||+.+ + .+||+|||++.....
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~- 165 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS- 165 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecc-
Confidence 999999999999998765 5899999999999999999999865 3 568888887654322
Q ss_pred CCcceeecccccCcccChhcccCCCCcc---ccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 595 SNSSQFSQIRGTKGYMAPEWASNLPITA---KVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
....||+.|+|||++.+..++. ++||||||+++|||++|+.||...... ......
T Consensus 166 ------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---------~~~~~~------- 223 (271)
T 3kmu_A 166 ------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM---------EIGMKV------- 223 (271)
T ss_dssp ------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH---------HHHHHH-------
T ss_pred ------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH---------HHHHHH-------
Confidence 2346899999999998765544 899999999999999999999633210 000000
Q ss_pred ccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 672 EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 672 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
.. .......+...+..+.+++.+||+.||++|||+.+|++.|+++.+
T Consensus 224 ----~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 224 ----AL----EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ----HH----SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ----Hh----cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 00 111112223345678899999999999999999999999998865
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-36 Score=319.96 Aligned_cols=235 Identities=23% Similarity=0.241 Sum_probs=184.2
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 531 (736)
.+...+|++.+.||+|+||.||+|+.. +++.||||++++. ....+.+.+|..+|+.+ +||||+++++++.+.+.
T Consensus 19 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 98 (353)
T 3txo_A 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR 98 (353)
T ss_dssp ----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred CCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE
Confidence 455678899999999999999999954 5899999999753 23446678999999988 79999999999999999
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.+|||||+++|+|..++.....+++..+..++.||+.||.|||+.+ ..+||+|||+++......
T Consensus 99 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 99 LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence 9999999999999999988788999999999999999999999763 378999999998643322
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
. .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..... .+....
T Consensus 179 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~---------~~~~~----~i~~~~--- 240 (353)
T 3txo_A 179 V--TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE---------DDLFE----AILNDE--- 240 (353)
T ss_dssp ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHH----HHHHCC---
T ss_pred c--cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH---------HHHHH----HHHcCC---
Confidence 2 24456899999999999988899999999999999999999999974321 11111 111111
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHH
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM------DSVVQS 720 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 720 (736)
..++......+.+++.+||+.||++||++ .+|++|
T Consensus 241 ----------~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 241 ----------VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp ----------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred ----------CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 01122234578899999999999999998 777764
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=308.44 Aligned_cols=242 Identities=24% Similarity=0.312 Sum_probs=180.8
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCC----CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
+...+|++.+.||+|+||.||+|+... +..||||+++... ...+.+.+|+.++++++||||+++++++. ++..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 445788899999999999999998543 4579999987532 34567899999999999999999999984 5678
Q ss_pred EEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGS 595 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~ 595 (736)
++||||+++++|.+++.... .+++..+..++.|+++||.|||+.++ .+||+|||+++......
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCccc
Confidence 99999999999999997654 69999999999999999999997633 68999999998765433
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.. ......+|+.|+|||++....++.++||||||+++|||++ |..||....... .... +....
T Consensus 171 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---------~~~~----i~~~~-- 234 (281)
T 1mp8_A 171 YY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---------VIGR----IENGE-- 234 (281)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---------HHHH----HHTTC--
T ss_pred cc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---------HHHH----HHcCC--
Confidence 22 1233457789999999998899999999999999999997 888987432110 1111 11110
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
....+...+..+.+++.+||+.||++|||+.+|+++|+++.++
T Consensus 235 ----------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 235 ----------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp ----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0112233456788999999999999999999999999988654
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=308.17 Aligned_cols=249 Identities=22% Similarity=0.276 Sum_probs=195.3
Q ss_pred Hhhhhccc-ccCeeceeEEEEeeeC---CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 461 KSTKSFKE-ELGRGGSGAVYKGVLA---DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 461 ~~~~~~~~-~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
..++.+.+ .||+|+||.||+|+.. .+..||||+++... ...+.+.+|++++++++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 45566666 8999999999999853 47789999997643 3456789999999999999999999999 5567899
Q ss_pred EEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 535 IYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
||||+++++|.+++... ..+++..+..++.|+++||.|||+.+ ..+||+|||+++........
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred EEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 99999999999999754 46999999999999999999999763 36899999999877543322
Q ss_pred c-eeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 598 S-QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 598 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
. ......||+.|+|||++.+..++.++||||||+++|||++ |+.||..... .. ... .+..+
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~---~~~----~i~~~---- 229 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG------PE---VMA----FIEQG---- 229 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT------HH---HHH----HHHTT----
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH------HH---HHH----HHhcC----
Confidence 1 1223456889999999998889999999999999999998 9999864321 00 111 11111
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccccccccCC
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEIHITDD 735 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~ 735 (736)
.....+...+..+.+++.+||+.||++||++.+|+++|+++..+....-..+
T Consensus 230 --------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~~ 281 (287)
T 1u59_A 230 --------KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGH 281 (287)
T ss_dssp --------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSSC
T ss_pred --------CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcccCC
Confidence 0112233345688999999999999999999999999999877666554444
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=310.45 Aligned_cols=229 Identities=26% Similarity=0.287 Sum_probs=188.6
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
...|++.+.||+|+||.||+++.. +++.||||++++.. ...+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 356888999999999999999954 68999999996532 3456788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcce
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|||+++|+|.+++.....+++..+..++.||+.||.|||+. +..+||+|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~----- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV----- 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-----
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc-----
Confidence 99999999999998888899999999999999999999975 347899999999876432
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .... ..+....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---------~~~~----~~i~~~~------- 219 (318)
T 1fot_A 160 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT---------MKTY----EKILNAE------- 219 (318)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH---------HHHH----HHHHHCC-------
T ss_pred cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---------HHHH----HHHHhCC-------
Confidence 3346799999999999999999999999999999999999999964311 0111 1111110
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
+ .++......+.+++.+||+.||++|| ++++|++|
T Consensus 220 ----~--~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 220 ----L--RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ----C--CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ----C--CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 0 12223345788999999999999999 89999865
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=308.26 Aligned_cols=242 Identities=26% Similarity=0.345 Sum_probs=194.8
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+...+|.+.+.||+|+||.||+|+..++..||||.+.......+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus 10 v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 88 (279)
T 1qpc_A 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (279)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred cCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence 3456788999999999999999998888899999998766667889999999999999999999999864 568999999
Q ss_pred CCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCccee
Q 041821 539 VEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 539 ~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
+++++|.+++.... .+++..+..++.|++.||.|||+. +..+||+|||+++........ ..
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~ 167 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AR 167 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE-CC
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc-cc
Confidence 99999999997643 699999999999999999999975 337899999999877543221 12
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ..... .+..+
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---------~~~~~----~~~~~-------- 226 (279)
T 1qpc_A 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN---------PEVIQ----NLERG-------- 226 (279)
T ss_dssp TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH---------HHHHH----HHHTT--------
T ss_pred cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH---------HHHHH----HHhcc--------
Confidence 33457889999999998889999999999999999999 8888863211 01111 11111
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
.....+...+..+.+++.+||+.||++|||+.+|++.|+++...
T Consensus 227 ----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 227 ----YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----cCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 01111223346788999999999999999999999999987544
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=314.05 Aligned_cols=245 Identities=20% Similarity=0.271 Sum_probs=177.5
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCC-C---cEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLAD-G---RAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~---~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 531 (736)
+....|.+.+.||+|+||.||+|+... + ..||||+++.. ....+.+.+|+.++++++||||+++++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345678899999999999999999644 3 27999999653 3345778999999999999999999999988766
Q ss_pred E------EEEEecCCCCCHhhhcccCC------CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEc
Q 041821 532 R------LLIYEYVEKQSLDKHLFSSY------FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIA 583 (736)
Q Consensus 532 ~------~lv~e~~~~gsL~~~l~~~~------~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~ 583 (736)
. ++||||+++|+|.+++.... .+++..+..++.|+++||.|||+.+ ..+||+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~ 179 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVA 179 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEEC
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEe
Confidence 5 99999999999999986422 5899999999999999999999763 378999
Q ss_pred ccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHH
Q 041821 584 DFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVR 662 (736)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 662 (736)
|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.||....... ...
T Consensus 180 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---------~~~ 250 (323)
T 3qup_A 180 DFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---------IYN 250 (323)
T ss_dssp CCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---------HHH
T ss_pred eccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---------HHH
Confidence 9999987655443333344567889999999999999999999999999999999 888886432110 111
Q ss_pred HHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 663 EVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
.+.... ....+...+..+.+++.+||+.||++|||+.++++.|+++....
T Consensus 251 ----~~~~~~------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 251 ----YLIGGN------------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp ----HHHTTC------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ----HHhcCC------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 110000 11122234467899999999999999999999999999886543
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=308.61 Aligned_cols=251 Identities=29% Similarity=0.442 Sum_probs=182.3
Q ss_pred ccHHHHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC
Q 041821 454 FSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR 530 (736)
Q Consensus 454 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 530 (736)
+...||...+|.+.+.||+|+||.||+|+.. ..||||+++... ...+.+.+|+.++++++||||+++++++ ...
T Consensus 16 ~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~ 92 (289)
T 3og7_A 16 ADDWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAP 92 (289)
T ss_dssp --CCBCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSS
T ss_pred CCCCccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCC
Confidence 3344667788999999999999999999864 369999996533 3346789999999999999999999965 556
Q ss_pred eEEEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCC
Q 041821 531 HRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQR 593 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~ 593 (736)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ..+||+|||+++....
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 93 QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp SCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred ccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccc
Confidence 789999999999999999654 47999999999999999999999763 3689999999986654
Q ss_pred CCCcceeecccccCcccChhccc---CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhh
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWAS---NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILY 670 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (736)
...........||+.|+|||++. ...++.++||||||+++|||++|+.||...... ..+..... .
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~----~ 240 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--------DQIIEMVG----R 240 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH--------HHHHHHHH----H
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH--------HHHHHHhc----c
Confidence 33333345567999999999986 667899999999999999999999999643211 11111111 1
Q ss_pred hccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 671 EEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 671 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
.. ..+.+ .......+..+.+++.+||+.||++|||+.+|+++|+++.++
T Consensus 241 ~~-------~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~e 289 (289)
T 3og7_A 241 GS-------LSPDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289 (289)
T ss_dssp TS-------CCCCT-TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTCC
T ss_pred cc-------cCcch-hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhhC
Confidence 10 11111 111223456789999999999999999999999999998653
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-35 Score=304.37 Aligned_cols=236 Identities=25% Similarity=0.421 Sum_probs=186.2
Q ss_pred HHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccc--c------HHHHHHHHHHHhcCCCCceeeEEEEEEeCC
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQ--G------EEVFWAEVSTIGKIYHMNLVRMWGFCSEGR 530 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~--~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 530 (736)
...+|.+.+.||+|+||.||+|+. .+++.||||++..... . .+.+.+|+.++++++||||+++++++.+..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP 96 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence 346788899999999999999995 4689999999854221 1 167889999999999999999999987655
Q ss_pred eEEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC--C----------------c-----cEEcccC
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE--F----------------E-----PKIADFG 586 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~--~----------------~-----~kl~DFG 586 (736)
++||||+++++|.+++.... .+++..+..++.|++.||.|||+.+ + . +||+|||
T Consensus 97 --~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 97 --RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp --EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred --eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 69999999999988886544 7999999999999999999999876 4 2 8999999
Q ss_pred cccccCCCCCcceeecccccCcccChhcc--cCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHH
Q 041821 587 LAKLSQRGSNSSQFSQIRGTKGYMAPEWA--SNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV 664 (736)
Q Consensus 587 la~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 664 (736)
+++.... ......||+.|+|||++ ....++.++|||||||++|||++|+.||....... .......
T Consensus 175 ~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-------~~~~~~~ 242 (287)
T 4f0f_A 175 LSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-------IKFINMI 242 (287)
T ss_dssp TCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH-------HHHHHHH
T ss_pred ccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH-------HHHHHHH
Confidence 9975433 24456799999999998 45568899999999999999999999997432110 0011111
Q ss_pred HHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 665 KRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 665 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.........+...+..+.+++.+||+.||++|||+.+|++.|+++
T Consensus 243 ---------------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 ---------------REEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ---------------HHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ---------------hccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 011111222333456789999999999999999999999999864
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=309.01 Aligned_cols=233 Identities=22% Similarity=0.242 Sum_probs=179.1
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccc---------------------------cHHHHHHHHHHHh
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQ---------------------------GEEVFWAEVSTIG 512 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~---------------------------~~~~~~~E~~~l~ 512 (736)
...|.+.+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|+++|+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 35688899999999999999995 4588999999854321 1245889999999
Q ss_pred cCCCCceeeEEEEEEe--CCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC--------------
Q 041821 513 KIYHMNLVRMWGFCSE--GRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-------------- 576 (736)
Q Consensus 513 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~-------------- 576 (736)
+++||||+++++++.+ ....++||||+++++|.+++.. ..+++.++..++.||++||.|||+.
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~ 170 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV 170 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE
Confidence 9999999999999987 5688999999999999987643 4699999999999999999999975
Q ss_pred --CCccEEcccCcccccCCCCCcceeecccccCcccChhcccCCC---CccccceechhHHHHHHHhCCCCCCccccCCc
Q 041821 577 --EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP---ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGE 651 (736)
Q Consensus 577 --~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~ 651 (736)
+..+||+|||+++....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~---- 244 (298)
T 2zv2_A 171 GEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER---- 244 (298)
T ss_dssp CTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS----
T ss_pred CCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc----
Confidence 34789999999987654322 234567999999999998665 4789999999999999999999996321
Q ss_pred cchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 652 GQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...... .+.... . .. ......+..+.+++.+||+.||++|||+.||++|
T Consensus 245 -----~~~~~~----~~~~~~---~----~~----~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 -----IMCLHS----KIKSQA---L----EF----PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp -----HHHHHH----HHHHCC---C----CC----CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred -----HHHHHH----HHhccc---C----CC----CCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 111111 111110 0 00 0011234578899999999999999999999865
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=307.53 Aligned_cols=259 Identities=22% Similarity=0.288 Sum_probs=191.4
Q ss_pred ccHHHHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcC--CCCceeeEEEEEEeC--
Q 041821 454 FSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI--YHMNLVRMWGFCSEG-- 529 (736)
Q Consensus 454 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~-- 529 (736)
+...+.....|.+.+.||+|+||.||+|+.. ++.||||++.... ...+..|.+++..+ +||||+++++++...
T Consensus 29 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 29 LLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp HHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred cccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 3445566788999999999999999999974 8999999986443 33344555555554 899999999999987
Q ss_pred --CeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC--------C----------------CccEEc
Q 041821 530 --RHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD--------E----------------FEPKIA 583 (736)
Q Consensus 530 --~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~--------~----------------~~~kl~ 583 (736)
...++||||+++|+|.+++... .+++..+..++.|++.||.|||+. + ..+||+
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred CCCceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 7899999999999999999665 599999999999999999999965 2 368999
Q ss_pred ccCcccccCCCCCcce--eecccccCcccChhcccCCCCccc------cceechhHHHHHHHhC----------CCCCCc
Q 041821 584 DFGLAKLSQRGSNSSQ--FSQIRGTKGYMAPEWASNLPITAK------VDVYSYGVVILEMVKG----------IRLSNW 645 (736)
Q Consensus 584 DFGla~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~------~DvwS~Gvvl~el~tg----------~~p~~~ 645 (736)
|||+++.......... .....||+.|+|||++.+...+.+ +|||||||++|||++| +.||..
T Consensus 185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~ 264 (337)
T 3mdy_A 185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264 (337)
T ss_dssp CCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence 9999987654332211 224579999999999987766554 9999999999999999 445443
Q ss_pred cccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCC-CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 646 VVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGK-FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
....... .. ...... ......+..... .+...+..+.+++.+||+.||++|||+.+|+++|+.+
T Consensus 265 ~~~~~~~----~~----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 329 (337)
T 3mdy_A 265 LVPSDPS----YE----DMREIV-------CIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329 (337)
T ss_dssp TSCSSCC----HH----HHHHHH-------TTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred hcCCCCc----hh----hhHHHH-------hhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHH
Confidence 2221110 00 010000 011111111111 1236678899999999999999999999999999999
Q ss_pred ccccccc
Q 041821 725 ETESEIH 731 (736)
Q Consensus 725 ~~~~~~~ 731 (736)
.++.++.
T Consensus 330 ~~~~~~~ 336 (337)
T 3mdy_A 330 SESQDIK 336 (337)
T ss_dssp HHTTTCC
T ss_pred HhhcccC
Confidence 8877654
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=314.94 Aligned_cols=235 Identities=22% Similarity=0.284 Sum_probs=173.7
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
...|.+.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|+.+|++++||||+++++++.+.+..++||||+
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 130 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV 130 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence 356888899999999999999965 47899999996543 3456789999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC-------------------CCccEEcccCcccccCCCCCccee
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-------------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~-------------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
++++|.+++.....+++.++..++.||++||.|||+. +..+||+|||+++....... .
T Consensus 131 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~---~ 207 (349)
T 2w4o_A 131 TGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL---M 207 (349)
T ss_dssp CSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------------
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccc---c
Confidence 9999999998888899999999999999999999965 34689999999987654321 3
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ... ...+.... ....
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~----~~~i~~~~----~~~~ 271 (349)
T 2w4o_A 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD--------QFM----FRRILNCE----YYFI 271 (349)
T ss_dssp -----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH--------HHH----HHHHHTTC----CCCC
T ss_pred ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc--------HHH----HHHHHhCC----CccC
Confidence 4567999999999999999999999999999999999999998633211 001 11111111 0000
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.......+..+.+|+.+||+.||++|||+.|++++
T Consensus 272 -----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 272 -----SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -----TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -----CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11112334578899999999999999999999986
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=312.24 Aligned_cols=245 Identities=25% Similarity=0.330 Sum_probs=194.7
Q ss_pred HHHhhhhcccccCeeceeEEEEeee------CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeC
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEG 529 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 529 (736)
+...+|.+.+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+.++.++ +||||+++++++...
T Consensus 24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 103 (316)
T 2xir_A 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 103 (316)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred cchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence 4567889999999999999999973 346889999997643 3345789999999999 799999999998775
Q ss_pred C-eEEEEEecCCCCCHhhhcccCCC----------------CCHHHHHHHHHHHHHHhhhhhcCCC--------------
Q 041821 530 R-HRLLIYEYVEKQSLDKHLFSSYF----------------LGWKERFKVALGTAKGLAYLHHDEF-------------- 578 (736)
Q Consensus 530 ~-~~~lv~e~~~~gsL~~~l~~~~~----------------l~~~~~~~i~~~i~~gL~yLH~~~~-------------- 578 (736)
+ ..++||||+++++|.+++..... +++..+..++.||++||.|||+.++
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~ 183 (316)
T 2xir_A 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 183 (316)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECC
Confidence 4 58999999999999999976543 8899999999999999999997643
Q ss_pred --ccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchh
Q 041821 579 --EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEA 655 (736)
Q Consensus 579 --~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~ 655 (736)
.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 184 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~----- 258 (316)
T 2xir_A 184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----- 258 (316)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH-----
T ss_pred CCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH-----
Confidence 689999999987765544444455678999999999999999999999999999999998 999986432111
Q ss_pred HHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 656 ELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
.+... ...+. . ...+...+..+.+++.+||+.||++|||+.+|+++|+++.+.
T Consensus 259 ---~~~~~----~~~~~--------~----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 259 ---EFCRR----LKEGT--------R----MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp ---HHHHH----HHHTC--------C----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---HHHHH----hccCc--------c----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 01111 11110 0 111222345788999999999999999999999999988654
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=316.40 Aligned_cols=236 Identities=18% Similarity=0.221 Sum_probs=187.2
Q ss_pred HHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc------ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH------QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
....|++.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456799999999999999999995 458999999985421 2457789999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccC----CCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCccc
Q 041821 533 LLIYEYVEKQSLDKHLFSS----YFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAK 589 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~ 589 (736)
++|||||++++|.+.+... ..+++..+..++.||+.||.|||++++ .+||+|||+++
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~ 181 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAI 181 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCccee
Confidence 9999999999998877542 258999999999999999999997632 38999999998
Q ss_pred ccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 590 LSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... . .... .+.
T Consensus 182 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~---~~~~----~i~ 245 (351)
T 3c0i_A 182 QLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-------E---RLFE----GII 245 (351)
T ss_dssp ECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-------H---HHHH----HHH
T ss_pred EecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-------H---HHHH----HHH
Confidence 7755332 1344679999999999999999999999999999999999999997421 0 1111 111
Q ss_pred hhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 670 YEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 670 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+. . ...+... ...+..+.+|+.+||+.||++|||+.|++++
T Consensus 246 ~~~---~--~~~~~~~----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 246 KGK---Y--KMNPRQW----SHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HTC---C--CCCHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCC---C--CCCcccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111 0 0000000 0123578899999999999999999999875
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-35 Score=316.61 Aligned_cols=234 Identities=19% Similarity=0.217 Sum_probs=189.1
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
..|.+.+.||+|+||.||+|+.. +++.||+|.+.... .....+.+|+.+|++++||||+++++++.+....++||||+
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 130 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence 56889999999999999999954 58899999996543 34457889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC------------------CccEEcccCcccccCCCCCccee
Q 041821 540 EKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE------------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 540 ~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~------------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
++|+|.+++.... .+++.++..++.||+.||.|||+.+ ..+||+|||+++....... .
T Consensus 131 ~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~---~ 207 (387)
T 1kob_A 131 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI---V 207 (387)
T ss_dssp CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC---E
T ss_pred CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc---e
Confidence 9999999997654 7999999999999999999999652 3589999999987755432 3
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
....||+.|+|||++.+..++.++|||||||++|||++|..||..... ......+. ... ...
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~---------~~~~~~i~----~~~-----~~~ 269 (387)
T 1kob_A 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD---------LETLQNVK----RCD-----WEF 269 (387)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH---------HHHHHHHH----HCC-----CCC
T ss_pred eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH---------HHHHHHHH----hCC-----CCC
Confidence 445799999999999999999999999999999999999999974311 11111111 100 001
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
++. .....+..+.+++.+||+.||++|||+.|++++
T Consensus 270 ~~~----~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 270 DED----AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp CSS----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred Ccc----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 111 112234578899999999999999999999986
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=309.08 Aligned_cols=258 Identities=21% Similarity=0.241 Sum_probs=193.8
Q ss_pred HHHHHHhhhhcccccCeeceeEEEEeee-----CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEe
Q 041821 456 YAELKKSTKSFKEELGRGGSGAVYKGVL-----ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE 528 (736)
Q Consensus 456 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 528 (736)
...+....|++.+.||+|+||.||+|++ .+++.||||++.... ...+.+.+|+.++++++||||+++++++.+
T Consensus 15 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 94 (302)
T 4e5w_A 15 PTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE 94 (302)
T ss_dssp TTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred hhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEec
Confidence 3344566788999999999999999983 358899999997532 345778999999999999999999999987
Q ss_pred C--CeEEEEEecCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCccc
Q 041821 529 G--RHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAK 589 (736)
Q Consensus 529 ~--~~~~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~ 589 (736)
. ...++||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ ..+||+|||+++
T Consensus 95 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 95 DGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp ---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred CCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccc
Confidence 6 668999999999999999954 447999999999999999999999763 368999999998
Q ss_pred ccCCCCCcc-eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccc--hhHHHHHHHHHHH
Q 041821 590 LSQRGSNSS-QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQ--EAELKRFVREVKR 666 (736)
Q Consensus 590 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~--~~~~~~~~~~~~~ 666 (736)
......... ......||..|+|||++.+..++.++||||||+++|||++|+.|+.......... ............
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 253 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV- 253 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH-
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH-
Confidence 776543321 2334568889999999999999999999999999999999998864221000000 000000000111
Q ss_pred HHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 667 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
..+........+...+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 254 -----------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 254 -----------NTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp -----------HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----------HHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 111111122233344568899999999999999999999999998764
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=310.63 Aligned_cols=241 Identities=20% Similarity=0.196 Sum_probs=187.3
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 534 (736)
...|++.+.||+|+||.||+++.. +++.||||++++.. ...+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 356888999999999999999964 58899999996532 2345678899999987 89999999999999999999
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
||||+++|+|.+++.....+++..+..++.||+.||.|||+.+ ..+||+|||+++.......
T Consensus 88 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~-- 165 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-- 165 (345)
T ss_dssp EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC--
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCC--
Confidence 9999999999999987778999999999999999999999763 3789999999986433222
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||.............. ......+....
T Consensus 166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~----~~~~~~i~~~~------ 235 (345)
T 3a8x_A 166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE----DYLFQVILEKQ------ 235 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CH----HHHHHHHHHCC------
T ss_pred cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccH----HHHHHHHHcCC------
Confidence 24456899999999999999999999999999999999999999964321111000000 11111111110
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM------DSVVQS 720 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 720 (736)
...+...+..+.+++.+||+.||++||++ .+|++|
T Consensus 236 -------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 236 -------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp -------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred -------CCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 11222334678899999999999999995 677765
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=303.26 Aligned_cols=247 Identities=19% Similarity=0.178 Sum_probs=183.4
Q ss_pred hhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
+|++.++||+|+||+||+|+.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 82 (292)
T 3o0g_A 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_dssp SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEec
Confidence 5788899999999999999954 58999999996432 2346788999999999999999999999999999999999
Q ss_pred CCCCCHhhhc-ccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHL-FSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l-~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+++ +|.+.+ .....+++..+..++.|++.||.|||+. +..+||+|||+++....... ...
T Consensus 83 ~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~ 159 (292)
T 3o0g_A 83 CDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR--CYS 159 (292)
T ss_dssp CSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS--CCC
T ss_pred CCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc--ccc
Confidence 985 555544 4456899999999999999999999976 33789999999987654322 234
Q ss_pred cccccCcccChhcccCCC-CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc---c
Q 041821 602 QIRGTKGYMAPEWASNLP-ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI---E 677 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 677 (736)
...||+.|+|||++.+.. ++.++|||||||++|||++|..|+..... ... ....+.+.......... .
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~----~~~----~~~~i~~~~~~~~~~~~~~~~ 231 (292)
T 3o0g_A 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND----VDD----QLKRIFRLLGTPTEEQWPSMT 231 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS----HHH----HHHHHHHHHCCCCTTTCTTGG
T ss_pred CCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC----HHH----HHHHHHHHhCCCChhhhhhhc
Confidence 567899999999998766 89999999999999999999888643211 111 11111111111100000 0
Q ss_pred cccc---------CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 678 EIVD---------PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 678 ~~~d---------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+ ........+.....+.+|+.+||+.||++|||++|+++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000 000011122345678899999999999999999999975
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=316.04 Aligned_cols=244 Identities=25% Similarity=0.306 Sum_probs=194.3
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC--------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA--------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFC 526 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 526 (736)
++...+|.+.+.||+|+||.||+|+.. ++..||||+++... ...+.+.+|+.+++++ +||||+++++++
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence 455678899999999999999999852 46789999997543 3446788999999999 899999999999
Q ss_pred EeCCeEEEEEecCCCCCHhhhcccCC----------------CCCHHHHHHHHHHHHHHhhhhhcC--------------
Q 041821 527 SEGRHRLLIYEYVEKQSLDKHLFSSY----------------FLGWKERFKVALGTAKGLAYLHHD-------------- 576 (736)
Q Consensus 527 ~~~~~~~lv~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~i~~gL~yLH~~-------------- 576 (736)
.+.+..++||||+++|+|.+++.... .+++.++..++.||++||.|||+.
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEE
Confidence 99999999999999999999997643 389999999999999999999975
Q ss_pred --CCccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccc
Q 041821 577 --EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQ 653 (736)
Q Consensus 577 --~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~ 653 (736)
+..+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------ 264 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------ 264 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC------
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC------
Confidence 34789999999987765443333344567889999999998889999999999999999999 999986331
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 654 EAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
...+...+ ..+. ....+...+..+.+++.+||+.||++|||+.+|+++|+++..
T Consensus 265 ---~~~~~~~~----~~~~------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 265 ---VEELFKLL----KEGH------------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp ---HHHHHHHH----HHTC------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHHHHHH----hcCC------------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11111111 1110 011122334578899999999999999999999999998754
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=317.21 Aligned_cols=246 Identities=25% Similarity=0.341 Sum_probs=194.3
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCC------CcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD------GRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE 528 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 528 (736)
++....|.+.+.||+|+||.||+|+... ...||||.+.... ...+.+.+|+.+++++ +||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 4556778889999999999999998532 2479999997543 3456789999999999 89999999999999
Q ss_pred CCeEEEEEecCCCCCHhhhcccC--------------CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSS--------------YFLGWKERFKVALGTAKGLAYLHHDEF---------------- 578 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~--------------~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------- 578 (736)
++..++||||+++|+|.+++... ..+++..+..++.||+.||.|||+.++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGG
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCC
Confidence 99999999999999999998642 357999999999999999999997632
Q ss_pred ccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHH
Q 041821 579 EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAEL 657 (736)
Q Consensus 579 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~ 657 (736)
.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |..||...... ...
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-----~~~ 276 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-----SKF 276 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-----HHH
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-----HHH
Confidence 679999999987655443333444567889999999998899999999999999999998 88888643211 111
Q ss_pred HHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 658 KRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
. .... .. .....+...+..+.+++.+||+.||.+|||+.+|+++|+++..+
T Consensus 277 ~---~~~~----~~------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 277 Y---KLVK----DG------------YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp H---HHHH----HT------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred H---HHHh----cC------------CCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 1 1100 00 01111222346788999999999999999999999999987654
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-35 Score=307.92 Aligned_cols=247 Identities=23% Similarity=0.225 Sum_probs=184.2
Q ss_pred hhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
.+|.+.++||+|+||.||+|+..+++.||||++.... ...+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 100 (311)
T 3niz_A 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF 100 (311)
T ss_dssp CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence 5688899999999999999998889999999996533 2246788999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
++ ++|.+++.... .+++..+..++.|+++||.|||+. +..+||+|||+++....... ...
T Consensus 101 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~--~~~ 177 (311)
T 3niz_A 101 ME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR--SYT 177 (311)
T ss_dssp CS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-----
T ss_pred CC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc--ccc
Confidence 98 57887776544 699999999999999999999975 33789999999987654322 234
Q ss_pred cccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 602 QIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ....+... .............
T Consensus 178 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----~~~~i~~~----~~~~~~~~~~~~~ 248 (311)
T 3niz_A 178 HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-----QLPKIFSI----LGTPNPREWPQVQ 248 (311)
T ss_dssp CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-----HHHHHHHH----HCCCCTTTSGGGT
T ss_pred CCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHHH----HCCCChHHhhhhh
Confidence 4578999999999876 568999999999999999999999997543221 11111111 0000000000000
Q ss_pred ------cCcc--CCCC-----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 ------DPRL--KGKF-----NTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 ------d~~~--~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+... .... .+.....+.+|+.+||+.||++|||+.|+++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000 0000 11123578899999999999999999999985
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=326.15 Aligned_cols=238 Identities=16% Similarity=0.117 Sum_probs=186.3
Q ss_pred HhhhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
..+|++.++||+|+||+||+|+... ++.||||++++.. ...+.+.+|+.++..++||||+++++++.+.+..+||
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 152 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence 4678888999999999999999654 7899999996522 1223478999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcc
Q 041821 536 YEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~ 598 (736)
||||++|+|.+++.. ...+++..+..++.||+.||.|||+. +..+||+|||+++........
T Consensus 153 ~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~- 231 (437)
T 4aw2_A 153 MDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV- 231 (437)
T ss_dssp ECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE-
T ss_pred EecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCc-
Confidence 999999999999987 45799999999999999999999965 347899999999876544322
Q ss_pred eeecccccCcccChhccc-----CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 599 QFSQIRGTKGYMAPEWAS-----NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
.....+||+.|||||++. ...++.++|||||||++|||++|+.||..... ......+....
T Consensus 232 ~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~-----~~~~~~i~~~~--------- 297 (437)
T 4aw2_A 232 QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHK--------- 297 (437)
T ss_dssp ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHTHH---------
T ss_pred ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh-----hHHHHhhhhcc---------
Confidence 234468999999999987 56799999999999999999999999974321 11111111100
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSK--RPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 720 (736)
....-+.. ....+..+.+|+.+||..+|++ ||+++||++|
T Consensus 298 ---~~~~~p~~----~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 298 ---ERFQFPTQ----VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp ---HHCCCCSS----CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred ---ccccCCcc----cccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 00000111 1113457888999999888888 9999999986
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=315.90 Aligned_cols=235 Identities=23% Similarity=0.271 Sum_probs=188.1
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 531 (736)
.+....|.+.+.||+|+||.||+|+.. +++.||||++++. ....+.+..|..++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345577889999999999999999964 5899999999753 23456678899999876 89999999999999999
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.++||||+++|+|.+++.....+++..+..++.||+.||.|||+.+ ..+||+|||+++......
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 172 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 172 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC
Confidence 9999999999999999987778999999999999999999999763 378999999998654322
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
. .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..... .+....
T Consensus 173 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---------~~~~~----~i~~~~--- 234 (345)
T 1xjd_A 173 A--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE---------EELFH----SIRMDN--- 234 (345)
T ss_dssp C--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHH----HHHHCC---
T ss_pred C--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH---------HHHHH----HHHhCC---
Confidence 2 24456899999999999999999999999999999999999999974321 11111 111111
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH-HHHHH
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMD-SVVQS 720 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~~ 720 (736)
+ .++...+..+.+++.+||+.||++||++. +|++|
T Consensus 235 ------~----~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 235 ------P----FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp ------C----CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred ------C----CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 1 11222346788999999999999999997 76643
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=301.21 Aligned_cols=247 Identities=25% Similarity=0.310 Sum_probs=182.5
Q ss_pred hhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
++|.+.+.||+|+||.||+|+..+++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 3578889999999999999998779999999996533 2236788999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+++ +|.+++... ..+++..+..++.||++||.|||+.+ ..+||+|||+++....... ...
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~ 158 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR--KYT 158 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc--ccc
Confidence 984 999888764 57999999999999999999999763 3789999999987653322 234
Q ss_pred cccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc-cc--cc
Q 041821 602 QIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE-AW--IE 677 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~ 677 (736)
...||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ...... ..+....... .+ ..
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~----~~~~~~~~~~~~~~~~~ 229 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE-----ADQLMR----IFRILGTPNSKNWPNVT 229 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHH----HHHHHCCCCTTTSTTGG
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH----HHHHHCCCChhhchhhh
Confidence 45789999999998764 589999999999999999999999974321 111111 1111100000 00 00
Q ss_pred c--cccCccC-------CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 678 E--IVDPRLK-------GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 678 ~--~~d~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+ ..++... .......+..+.+++.+||+.||++|||+.|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0 0011110 00112234678899999999999999999999875
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-35 Score=312.54 Aligned_cols=228 Identities=21% Similarity=0.164 Sum_probs=188.5
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|++.+.||+|+||.||+++.. +++.||||++.+.. ...+.+.+|+.+|+.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888999999999999999954 58999999996532 34567889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
||+++|+|.+++.....+++..+..++.||+.||.|||+. +..+||+|||+++..... .
T Consensus 121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-----~ 195 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----T 195 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-----B
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC-----c
Confidence 9999999999998877899999999999999999999975 347899999999876432 2
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .... ..+..+.
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---------~~~~----~~i~~~~-------- 254 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---------IQIY----EKIVSGK-------- 254 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHH----HHHHHCC--------
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH---------HHHH----HHHHcCC--------
Confidence 346799999999999999999999999999999999999999974311 1111 1111111
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT-----MDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 720 (736)
..++...+..+.+++.+||+.||++||+ +.+|++|
T Consensus 255 -----~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 255 -----VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp -----CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred -----CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 0112233467889999999999999998 8888865
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=312.17 Aligned_cols=234 Identities=18% Similarity=0.251 Sum_probs=188.8
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
....|.+.+.||+|+||.||+++.. +++.||||++... ....+.+.+|+.+|+.++|||||++++++.+.+..++
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3467889999999999999999954 5889999999653 2345678899999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~ 598 (736)
||||+++|+|..++.....+++..+..++.||+.||.|||+. +..+||+|||+++.......
T Consensus 93 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~-- 170 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ-- 170 (384)
T ss_dssp EECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC--
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCc--
Confidence 999999999999999888899999999999999999999975 33789999999987654332
Q ss_pred eeecccccCcccChhcccC---CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 599 QFSQIRGTKGYMAPEWASN---LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
.....||+.|+|||++.. ..++.++|||||||++|||++|+.||....... ......... ..
T Consensus 171 -~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~------~~~~~~~~~----~~---- 235 (384)
T 4fr4_A 171 -ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS------SKEIVHTFE----TT---- 235 (384)
T ss_dssp -BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC------HHHHHHHHH----HC----
T ss_pred -eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc------HHHHHHHHh----hc----
Confidence 455779999999999874 458999999999999999999999997432211 111111110 00
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT-MDSVVQ 719 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 719 (736)
....+...+..+.+|+.+||+.||++||+ +.+|++
T Consensus 236 ---------~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 236 ---------VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ---------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ---------ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 01122233467889999999999999998 777765
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-35 Score=316.51 Aligned_cols=229 Identities=19% Similarity=0.220 Sum_probs=178.4
Q ss_pred ccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 467 KEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
.+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+.+|++++||||+++++++.+.+..+|||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 46799999999999995 468999999997643 4556789999999999999999999999999999999999999999
Q ss_pred hhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC------------------CccEEcccCcccccCCCCCcceeecccc
Q 041821 545 DKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE------------------FEPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 545 ~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~------------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
.+++.... .+++..+..++.||++||.|||+.+ ..+||+|||+++....... .....|
T Consensus 174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~~~~~g 250 (373)
T 2x4f_A 174 FDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---LKVNFG 250 (373)
T ss_dssp HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---CCCCCS
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---cccccC
Confidence 99886543 6999999999999999999999652 3589999999987755432 334569
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
|+.|+|||++.+..++.++|||||||++|||++|+.||..... . .....+. ... . . .....
T Consensus 251 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-----~----~~~~~i~----~~~---~-~-~~~~~- 311 (373)
T 2x4f_A 251 TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-----A----ETLNNIL----ACR---W-D-LEDEE- 311 (373)
T ss_dssp SCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-----H----HHHHHHH----HTC---C-C-SCSGG-
T ss_pred CCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----H----HHHHHHH----hcc---C-C-CChhh-
Confidence 9999999999999999999999999999999999999974321 0 1111111 100 0 0 00000
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 686 GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 686 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
....+..+.+|+.+||+.||++|||+.|++++
T Consensus 312 ---~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 312 ---FQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp ---GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---hccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11224578899999999999999999999974
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-35 Score=308.48 Aligned_cols=255 Identities=23% Similarity=0.301 Sum_probs=192.6
Q ss_pred hhcccccCeeceeEEEEeee-----CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEe--CCeEEE
Q 041821 464 KSFKEELGRGGSGAVYKGVL-----ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE--GRHRLL 534 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 534 (736)
+.+.+.||+|+||.||++.+ .+++.||||+++... ...+.+.+|+.+|++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 48889999999999988763 257899999997643 345678999999999999999999999988 467899
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
||||+++++|.+++.... +++..+..++.|++.||.|||+.+ ..+||+|||+++.........
T Consensus 113 v~e~~~~~~L~~~l~~~~-~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 191 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 191 (318)
T ss_dssp EECCCTTCBHHHHGGGSC-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEE
T ss_pred EEecccCCcHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccccccccccc
Confidence 999999999999997654 999999999999999999999763 368999999998776543321
Q ss_pred -eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 599 -QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 599 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
......||..|+|||++.+..++.++||||||+++|||++|+.||...... ................ +.
T Consensus 192 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~---~~ 261 (318)
T 3lxp_A 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK-------FLELIGIAQGQMTVLR---LT 261 (318)
T ss_dssp EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH-------HHHHHCSCCHHHHHHH---HH
T ss_pred ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchh-------hhhhhcccccchhHHH---HH
Confidence 123456788999999999989999999999999999999999998643211 0000000000000000 11
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccc
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (736)
+.+........+...+..+.+|+.+||+.||++|||+.+|++.|+++.+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 262 ELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 1122222223334455789999999999999999999999999998866543
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-35 Score=308.41 Aligned_cols=235 Identities=24% Similarity=0.227 Sum_probs=180.1
Q ss_pred ccHHHHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcC-CCCceeeEEEEEEe
Q 041821 454 FSYAELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE 528 (736)
Q Consensus 454 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 528 (736)
....++....|++.++||+|+||+||+|+.. +++.||||++.... .....+..|+..+.++ +||||+++++++.+
T Consensus 49 ~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~ 128 (311)
T 3p1a_A 49 SRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE 128 (311)
T ss_dssp TSSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred CCccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe
Confidence 3445667788999999999999999999965 68999999986532 2233455666666555 89999999999999
Q ss_pred CCeEEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCccccc
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLS 591 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~ 591 (736)
++..+|||||+ +++|.+++.... .+++..+..++.||+.||.|||+.+ ..+||+|||+++..
T Consensus 129 ~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 129 GGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred CCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 99999999999 679988887543 6999999999999999999999763 36899999999876
Q ss_pred CCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 592 QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
..... .....||+.|+|||++.+ .++.++|||||||++|||++|..|+.... . ...+..
T Consensus 208 ~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~--------~--------~~~~~~- 266 (311)
T 3p1a_A 208 GTAGA---GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE--------G--------WQQLRQ- 266 (311)
T ss_dssp C---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH--------H--------HHHHTT-
T ss_pred ccCCC---CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc--------H--------HHHHhc-
Confidence 54322 334569999999999876 69999999999999999999977764211 0 000000
Q ss_pred ccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 672 EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 672 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
....+.. +...+..+.+++.+||+.||++|||+.|++++
T Consensus 267 ------~~~~~~~----~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 267 ------GYLPPEF----TAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ------TCCCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ------cCCCccc----ccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 0011111 11224578899999999999999999999975
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=315.38 Aligned_cols=241 Identities=24% Similarity=0.322 Sum_probs=185.8
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcE----EEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRA----VAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~----vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
...|.+.+.||+|+||.||+|+.. +++. ||+|.+.... ...+.+.+|+.++++++||||+++++++. ++..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 456788899999999999999953 4443 8888875432 23345778999999999999999999986 45688
Q ss_pred EEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC
Q 041821 534 LIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~ 596 (736)
+||||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ ..+||+|||+++.......
T Consensus 91 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 170 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170 (325)
T ss_dssp EEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT
T ss_pred EEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccc
Confidence 999999999999999775 47999999999999999999999763 3689999999998766554
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
........||+.|+|||++.+..++.++|||||||++|||++ |+.||...... . ... .+....
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~---~~~----~~~~~~--- 234 (325)
T 3kex_A 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA------E---VPD----LLEKGE--- 234 (325)
T ss_dssp CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT------H---HHH----HHHTTC---
T ss_pred cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH------H---HHH----HHHcCC---
Confidence 444455678889999999998899999999999999999999 99998743211 1 111 111110
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
....+...+..+.+++.+||+.||++|||+.+|+++|+.+...
T Consensus 235 ---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 235 ---------RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp ---------BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred ---------CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0111112234577899999999999999999999999887543
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-35 Score=311.05 Aligned_cols=236 Identities=19% Similarity=0.261 Sum_probs=187.1
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEec
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
...|++.+.||+|+||.||+++.. +++.||||+++..... ..+|++++.++ +||||+++++++.+++..++||||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD---PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC---CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC---hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 467899999999999999999954 5889999999654322 34688888887 799999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC--------------------ccEEcccCcccccCCCCCcc
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF--------------------EPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~--------------------~~kl~DFGla~~~~~~~~~~ 598 (736)
+++|+|.+++.....+++..+..++.||+.||.|||+.++ .+||+|||+++.......
T Consensus 98 ~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~-- 175 (342)
T 2qr7_A 98 MKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG-- 175 (342)
T ss_dssp CCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC--
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC--
Confidence 9999999999888889999999999999999999997632 389999999987654432
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
......||+.|+|||++.+..++.++|||||||++|||++|..||....... ...+.. .+..+. .
T Consensus 176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~~~----~i~~~~---~-- 240 (342)
T 2qr7_A 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT------PEEILA----RIGSGK---F-- 240 (342)
T ss_dssp CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC------HHHHHH----HHHHCC---C--
T ss_pred ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC------HHHHHH----HHccCC---c--
Confidence 2345679999999999988889999999999999999999999997432111 111111 111111 0
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+........+..+.+|+.+||+.||++|||+.++++|
T Consensus 241 ----~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 241 ----SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp ----CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ----ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01111122334678899999999999999999999876
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-35 Score=310.64 Aligned_cols=242 Identities=22% Similarity=0.289 Sum_probs=183.0
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCc----EEEEEEeCc--ccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGR----AVAVKRLGD--LHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
...+|.+.+.||+|+||.||+|+.. +++ +||+|.+.. .....+.+.+|+.++++++||||+++++++..+. .
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred CHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 3467888999999999999999943 444 357887754 2345678999999999999999999999998765 7
Q ss_pred EEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGS 595 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~ 595 (736)
++|+||+++|+|.+++... ..+++..+..++.||+.||.|||+.++ .+||+|||+++......
T Consensus 92 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred eEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 8999999999999999764 479999999999999999999997643 68999999998775544
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... . +...
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~------~---~~~~----------- 231 (327)
T 3lzb_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS------E---ISSI----------- 231 (327)
T ss_dssp --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG------G---HHHH-----------
T ss_pred ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH------H---HHHH-----------
Confidence 4333444567889999999999999999999999999999999 99998643211 0 1111
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
+........+...+..+.+++.+||+.||++|||+.||++.|+.+...
T Consensus 232 -----~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 232 -----LEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -----HHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred -----HHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 011111112233455788999999999999999999999999987643
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-35 Score=312.81 Aligned_cols=235 Identities=21% Similarity=0.219 Sum_probs=188.5
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCC-CcEEEEEEeCcc----cccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDL----HQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 531 (736)
.+....|++.+.||+|+||.||+|+... ++.||||++++. ....+.+.+|..+|..+ +||||+++++++.+.+.
T Consensus 16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~ 95 (353)
T 2i0e_A 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 95 (353)
T ss_dssp ---CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE
T ss_pred CCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE
Confidence 3455678899999999999999999654 789999999653 23456788999999988 79999999999999999
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.++||||+++|+|.+++.....+++..+..++.||+.||.|||+.+ ..+||+|||+++......
T Consensus 96 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 96 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence 9999999999999999987778999999999999999999999763 378999999998643322
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
. .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..... .+....
T Consensus 176 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~---------~~~~~----~i~~~~--- 237 (353)
T 2i0e_A 176 V--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---------DELFQ----SIMEHN--- 237 (353)
T ss_dssp C--CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHH----HHHHCC---
T ss_pred c--ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH---------HHHHH----HHHhCC---
Confidence 2 24456799999999999999999999999999999999999999974311 11111 111111
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT-----MDSVVQS 720 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 720 (736)
..++...+..+.+|+.+||+.||++||+ +.+|++|
T Consensus 238 ----------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 238 ----------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ----------CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ----------CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1122234467889999999999999995 5777765
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-35 Score=309.66 Aligned_cols=234 Identities=21% Similarity=0.202 Sum_probs=180.4
Q ss_pred HHHhhhhcccccCeeceeEEEEeee----CCCcEEEEEEeCccc-----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVL----ADGRAVAVKRLGDLH-----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG 529 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 529 (736)
+....|++.+.||+|+||.||+++. .+++.||||++++.. .....+.+|+.+|++++||||+++++++.+.
T Consensus 14 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 93 (327)
T 3a62_A 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTG 93 (327)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECS
T ss_pred CCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcC
Confidence 3456789999999999999999985 468999999997532 2335578899999999999999999999999
Q ss_pred CeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCC
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQR 593 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~ 593 (736)
+..++||||+++++|.+++.....+++..+..++.||+.||.|||+.+ ..+||+|||+++....
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 94 GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp SCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred CEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 999999999999999999987778999999999999999999999763 3789999999976433
Q ss_pred CCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+ ....
T Consensus 174 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------~~~~~~i----~~~~- 237 (327)
T 3a62_A 174 DGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR---------KKTIDKI----LKCK- 237 (327)
T ss_dssp -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---------HHHHHHH----HHTC-
T ss_pred CCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH---------HHHHHHH----HhCC-
Confidence 222 23456799999999999998999999999999999999999999974321 1111111 1110
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
...+......+.+++.+||+.||++|| ++.|+++|
T Consensus 238 ------------~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 238 ------------LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp ------------CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred ------------CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 011222346788999999999999999 78888875
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-35 Score=310.39 Aligned_cols=256 Identities=21% Similarity=0.197 Sum_probs=194.2
Q ss_pred HHhhhhcccccCeeceeEEEEeee-----CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEE--eCCe
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVL-----ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCS--EGRH 531 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~ 531 (736)
....|.+.+.||+|+||.||++++ .+++.||||++.... ...+.+.+|++++++++||||+++++++. +...
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred chhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 346788999999999999999983 357899999997644 34466899999999999999999999987 4567
Q ss_pred EEEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRG 594 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~ 594 (736)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ..+||+|||+++.....
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred EEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 89999999999999999763 46999999999999999999999763 36899999999877544
Q ss_pred CCcc-eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccch--hHHHHHHHHHHHHHhhh
Q 041821 595 SNSS-QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQE--AELKRFVREVKRKILYE 671 (736)
Q Consensus 595 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 671 (736)
.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........... .........
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------- 252 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR-------- 252 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHH--------
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHH--------
Confidence 3321 12335688889999999998999999999999999999999999863321100000 000000001
Q ss_pred ccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 672 EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 672 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
+.+.+........+...+..+.+++.+||+.||++|||+.+|+++|+.+...
T Consensus 253 ----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 253 ----LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp ----HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred ----HHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 1111112222223444557889999999999999999999999999987543
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=309.20 Aligned_cols=233 Identities=20% Similarity=0.272 Sum_probs=180.1
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC-------
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR------- 530 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 530 (736)
...|++.+.||+|+||.||+|+.. +++.||||+++.. ....+.+.+|+.+|++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 357888999999999999999965 6899999999643 334577899999999999999999999986643
Q ss_pred --------------------------------------------------eEEEEEecCCCCCHhhhcccCC---CCCHH
Q 041821 531 --------------------------------------------------HRLLIYEYVEKQSLDKHLFSSY---FLGWK 557 (736)
Q Consensus 531 --------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~---~l~~~ 557 (736)
..++||||+++++|.+++.... ..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 3799999999999999998754 45677
Q ss_pred HHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCc----------ceeecccccCcccC
Q 041821 558 ERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNS----------SQFSQIRGTKGYMA 611 (736)
Q Consensus 558 ~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~----------~~~~~~~gt~~y~a 611 (736)
.+..++.||+.||.|||++ +..+||+|||+++........ .......||+.|+|
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 8899999999999999976 337899999999877654321 11234579999999
Q ss_pred hhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHH
Q 041821 612 PEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTN 691 (736)
Q Consensus 612 PE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 691 (736)
||++.+..++.++|||||||++|||++|..|+.. ........ . ... .......
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-----------~~~~~~~~----~-----------~~~-~~~~~~~ 297 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-----------RVRIITDV----R-----------NLK-FPLLFTQ 297 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-----------HHHHHHHH----H-----------TTC-CCHHHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-----------HHHHHHHh----h-----------ccC-CCccccc
Confidence 9999999999999999999999999998665421 01111100 0 000 0011223
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 692 QAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 692 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
....+.+++.+||+.||++|||+.|++++
T Consensus 298 ~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 298 KYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred CChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 34577899999999999999999999975
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=303.96 Aligned_cols=244 Identities=19% Similarity=0.272 Sum_probs=180.7
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|.+.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4688899999999999999995 56899999999642 233467889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC
Q 041821 537 EYVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 537 e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~ 596 (736)
||+++++|.+++.. ...+++..+..++.|+++||.|||+.+ ..+||+|||+++.......
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 191 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence 99999999998864 446899999999999999999999763 3689999999986654322
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
......|++.|+|||++.+..++.++||||||+++|||++|+.||...... ...... .+.... .
T Consensus 192 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~----~~~~~~---~ 255 (310)
T 2wqm_A 192 --AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-------LYSLCK----KIEQCD---Y 255 (310)
T ss_dssp ---------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC-------HHHHHH----HHHTTC---S
T ss_pred --cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh-------HHHHHH----Hhhccc---C
Confidence 133456899999999999999999999999999999999999998632111 011111 111110 0
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccc
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (736)
+.. .....+..+.+++.+||+.||++|||+.+|+++|+++.....
T Consensus 256 -----~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 256 -----PPL---PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp -----CCC---CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred -----CCC---cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 100 112234578899999999999999999999999998865433
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=298.55 Aligned_cols=237 Identities=22% Similarity=0.267 Sum_probs=189.2
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
...|.+.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 367889999999999999999954 68999999986432 345678999999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|+++++|.+++.....+++..+..++.|++.||.|||+. +..+||+|||++.............
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 165 (276)
T 2yex_A 86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165 (276)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred ecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhccc
Confidence 999999999998877899999999999999999999975 3478999999998664433222234
Q ss_pred cccccCcccChhcccCCCC-ccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPI-TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...||+.|+|||++.+..+ +.++||||||+++|||++|+.||........ . + .. +.... ...
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~---~-~~----~~~~~-----~~~ 228 (276)
T 2yex_A 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ----E---Y-SD----WKEKK-----TYL 228 (276)
T ss_dssp CCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH----H---H-HH----HHTTC-----TTS
T ss_pred CCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH----H---H-HH----hhhcc-----ccc
Confidence 5678999999999987765 7899999999999999999999974332111 0 0 00 00000 000
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......+..+.+++.+||+.||++|||+.||+++
T Consensus 229 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 229 ------NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp ------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ------CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0111234578899999999999999999999875
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=308.27 Aligned_cols=239 Identities=20% Similarity=0.205 Sum_probs=168.5
Q ss_pred hhhcc---cccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEEEEe
Q 041821 463 TKSFK---EELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 463 ~~~~~---~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 537 (736)
.|++. +.||+|+||.||+|+.. +++.||||++... ....+.+|+.+++++. ||||+++++++.+....++|||
T Consensus 9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 86 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVME 86 (325)
T ss_dssp HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEE
Confidence 45543 67999999999999954 5899999999543 4456788999999997 9999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCcccccCCCCCcc
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~~~~~~~~~~ 598 (736)
|+++|+|.+++.....+++.++..++.||+.||.|||+.++ .+||+|||+++.......
T Consensus 87 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-- 164 (325)
T 3kn6_A 87 LLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-- 164 (325)
T ss_dssp CCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred ccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--
Confidence 99999999999988889999999999999999999997532 689999999987654332
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .. ......+..+.
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--~~----~~~~~~i~~~~------ 232 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCT--SA----VEIMKKIKKGD------ 232 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CC--CH----HHHHHHHTTTC------
T ss_pred cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccc--cH----HHHHHHHHcCC------
Confidence 2345678999999999999999999999999999999999999997432211100 00 11111111111
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...........+..+.+|+.+||+.||++|||++|++++
T Consensus 233 ---~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 233 ---FSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp ---CCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred ---CCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 000000011234678999999999999999999999876
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=316.87 Aligned_cols=238 Identities=18% Similarity=0.226 Sum_probs=178.5
Q ss_pred HHHHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---------ccHHHHHHHHHHHhcCCCCceeeEEEEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---------QGEEVFWAEVSTIGKIYHMNLVRMWGFCS 527 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 527 (736)
+.....|.+.+.||+|+||.||+|.. .+++.||||++.... .....+.+|+.+|++++||||+++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 34567889999999999999999995 458999999986432 11224789999999999999999999975
Q ss_pred eCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCcc
Q 041821 528 EGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLA 588 (736)
Q Consensus 528 ~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla 588 (736)
. +..++||||+++|+|.+++.....+++..+..++.|+++||.|||+.++ .+||+|||++
T Consensus 211 ~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 211 A-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp S-SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred c-CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccc
Confidence 4 5679999999999999999888889999999999999999999997633 4899999999
Q ss_pred cccCCCCCcceeecccccCcccChhcccC---CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH
Q 041821 589 KLSQRGSNSSQFSQIRGTKGYMAPEWASN---LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK 665 (736)
Q Consensus 589 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (736)
+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ . ..
T Consensus 290 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-----~---~~--- 355 (419)
T 3i6u_A 290 KILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-----L---KD--- 355 (419)
T ss_dssp TSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-----H---HH---
T ss_pred eecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-----H---HH---
Confidence 8765432 2345679999999999863 6689999999999999999999999974322111 0 00
Q ss_pred HHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 666 RKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 666 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+..+..... +... ...+..+.+++.+||+.||++|||+.|+++|
T Consensus 356 -~i~~~~~~~~-----~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 356 -QITSGKYNFI-----PEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp -HHHTTCCCCC-----HHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -HHhcCCCCCC-----chhh----cccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 1111100000 0000 1124578899999999999999999999986
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=314.71 Aligned_cols=246 Identities=25% Similarity=0.338 Sum_probs=190.9
Q ss_pred HHHHhhhhcccccCeeceeEEEEeee------CCCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeC
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG 529 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 529 (736)
++...+|.+.+.||+|+||.||+|+. .+++.||||++... ......+.+|+.++++++||||+++++++.+.
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence 45667899999999999999999984 24678999999643 34456789999999999999999999999999
Q ss_pred CeEEEEEecCCCCCHhhhcccCC-------CCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEc
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSSY-------FLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIA 583 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~~-------~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~ 583 (736)
...++||||+++++|.+++.... .+++..+..++.||+.||.|||+.++ .+||+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999999997642 48999999999999999999997632 48999
Q ss_pred ccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHH
Q 041821 584 DFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVR 662 (736)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 662 (736)
|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||..... .....
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---------~~~~~ 256 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QEVLE 256 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---------HHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH---------HHHHH
Confidence 9999986644333323345668999999999998899999999999999999998 8888863211 11111
Q ss_pred HHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 663 EVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
.+..+. ....+...+..+.+++.+||+.||++|||+.+|+++|+.+..+.
T Consensus 257 ----~~~~~~------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 257 ----FVTSGG------------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp ----HHHTTC------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred ----HHhcCC------------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 111110 01112233457889999999999999999999999999876543
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=298.80 Aligned_cols=230 Identities=18% Similarity=0.228 Sum_probs=187.3
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc-cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL-HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
...|.+.+.||+|+||.||+|+.. ++..||+|++... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 457889999999999999999954 4779999999654 34567889999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC-------------------CccEEcccCcccccCCCCCcce
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE-------------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-------------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
+++++|.+++.....+++..+..++.|++.||.|||+.+ ..+||+|||++........
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~--- 164 (277)
T 3f3z_A 88 CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--- 164 (277)
T ss_dssp CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC---
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc---
Confidence 999999999988778999999999999999999999652 3689999999987654432
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.....||+.|+|||++.+. ++.++||||||+++|||++|+.||..... ..... .+..+.
T Consensus 165 ~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~---------~~~~~----~~~~~~------- 223 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD---------SEVML----KIREGT------- 223 (277)
T ss_dssp BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHH----HHHHCC-------
T ss_pred hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH---------HHHHH----HHHhCC-------
Confidence 3445799999999998765 89999999999999999999999964321 01111 111110
Q ss_pred ccCccCCCCCH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 VDPRLKGKFNT----NQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+. ..+..+.+++.+||+.||++|||+.+++++
T Consensus 224 ------~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 224 ------FTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp ------CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ------CCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111 124578899999999999999999999875
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=321.39 Aligned_cols=230 Identities=23% Similarity=0.286 Sum_probs=188.6
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|.+.+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+.+|+.++||||+++++++.+.+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56888999999999999999954 68999999996532 23467889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
||+++|+|.+++.....+++.++..++.||+.||.|||+. +..+||+|||+++....... .
T Consensus 96 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~---~ 172 (476)
T 2y94_A 96 EYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---L 172 (476)
T ss_dssp ECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC---B
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccccc---c
Confidence 9999999999998888899999999999999999999975 34789999999987754332 3
Q ss_pred ecccccCcccChhcccCCCC-ccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPI-TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
...+||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... .... ..+..+.
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~---------~~~~----~~i~~~~------- 232 (476)
T 2y94_A 173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV---------PTLF----KKICDGI------- 232 (476)
T ss_dssp CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS---------HHHH----HHHHTTC-------
T ss_pred cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH---------HHHH----HHHhcCC-------
Confidence 45679999999999988775 7899999999999999999999974321 1111 1111110
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ..+......+.+|+.+||+.||++|||+.||+++
T Consensus 233 ----~--~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 233 ----F--YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ----C--CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ----c--CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 0 1112223578899999999999999999999985
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-35 Score=308.17 Aligned_cols=234 Identities=25% Similarity=0.409 Sum_probs=180.1
Q ss_pred HhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
...|++.+.||+|+||.||+|+.. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 456788899999999999999974 788999999643 345678999999999999999999998874 4789999999
Q ss_pred CCCHhhhcccCC---CCCHHHHHHHHHHHHHHhhhhhc---CCC-----------------ccEEcccCcccccCCCCCc
Q 041821 541 KQSLDKHLFSSY---FLGWKERFKVALGTAKGLAYLHH---DEF-----------------EPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 541 ~gsL~~~l~~~~---~l~~~~~~~i~~~i~~gL~yLH~---~~~-----------------~~kl~DFGla~~~~~~~~~ 597 (736)
+++|.+++.... .+++..+..++.|+++||.|||+ +++ .+||+|||++......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 999999998654 47899999999999999999998 422 3799999999765432
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||....... ..... ....+
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-------~~~~~----~~~~~------ 220 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA-------FRIMW----AVHNG------ 220 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH-------HHHHH----HHHTT------
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH-------HHHHH----HHhcC------
Confidence 233469999999999999999999999999999999999999986432110 00000 00010
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
..+. .....+..+.+++.+||+.||++|||+.+|+++|+.+.+
T Consensus 221 --~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 221 --TRPP----LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp --CCCC----CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred --CCCC----cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 0111 112234578899999999999999999999999998754
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=301.92 Aligned_cols=240 Identities=24% Similarity=0.313 Sum_probs=188.3
Q ss_pred Hhhhhccc-ccCeeceeEEEEeee---CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 461 KSTKSFKE-ELGRGGSGAVYKGVL---ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 461 ~~~~~~~~-~lG~G~fg~Vy~~~~---~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
..+|.+.+ .||+|+||.||+|.. ..++.||||+++... ...+.+.+|+.++++++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45677777 899999999999963 336889999997542 2356789999999999999999999999 567789
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
+||||+++++|.+++.....+++..+..++.|+++||.|||+.+ ..+||+|||+++........
T Consensus 94 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173 (291)
T ss_dssp EEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred EEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence 99999999999999988878999999999999999999999763 36899999999877554332
Q ss_pred c-eeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 598 S-QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 598 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
. ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... . .. ...+..+.
T Consensus 174 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~---~~----~~~~~~~~--- 237 (291)
T 1xbb_A 174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG------S---EV----TAMLEKGE--- 237 (291)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH------H---HH----HHHHHTTC---
T ss_pred ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH------H---HH----HHHHHcCC---
Confidence 1 1223446789999999998889999999999999999999 9999864321 0 11 11111110
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
....+...+..+.+++.+||+.||++|||+.+|++.|+++..
T Consensus 238 ---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 238 ---------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp ---------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ---------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111223345678999999999999999999999999998753
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=311.43 Aligned_cols=245 Identities=23% Similarity=0.319 Sum_probs=193.5
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR 530 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 530 (736)
+....|.+.+.||+|+||.||+|+.. .++.||||.+.... .....+.+|+.++++++||||+++++++.+++
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 101 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 101 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC
Confidence 44567889999999999999999853 36789999997543 33456889999999999999999999999999
Q ss_pred eEEEEEecCCCCCHhhhcccC----------CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcc
Q 041821 531 HRLLIYEYVEKQSLDKHLFSS----------YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIAD 584 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~----------~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~D 584 (736)
..++||||+++|+|.+++... ..+++..+..++.||+.||.|||+++ ..+||+|
T Consensus 102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~D 181 (322)
T 1p4o_A 102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD 181 (322)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECC
T ss_pred ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECc
Confidence 999999999999999998642 35789999999999999999999763 3789999
Q ss_pred cCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHH
Q 041821 585 FGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVRE 663 (736)
Q Consensus 585 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 663 (736)
||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||..... ....
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---------~~~~-- 250 (322)
T 1p4o_A 182 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN---------EQVL-- 250 (322)
T ss_dssp TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH---------HHHH--
T ss_pred CccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH---------HHHH--
Confidence 999986644332222334567889999999998899999999999999999999 7888863211 1111
Q ss_pred HHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 664 VKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 664 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
..+.... . ...+...+..+.+++.+||+.||++|||+.|++++|+++.+..
T Consensus 251 --~~~~~~~---~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~ 301 (322)
T 1p4o_A 251 --RFVMEGG---L---------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301 (322)
T ss_dssp --HHHHTTC---C---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred --HHHHcCC---c---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence 1111110 0 1112233467889999999999999999999999999876543
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-35 Score=310.18 Aligned_cols=244 Identities=25% Similarity=0.360 Sum_probs=185.4
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCC-----CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLAD-----GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 531 (736)
+....|.+.+.||+|+||.||+|+... +..||||+++... .....+.+|+.++++++||||+++++++.+.+.
T Consensus 41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 345667788999999999999998543 2369999997543 334568999999999999999999999999999
Q ss_pred EEEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRG 594 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~ 594 (736)
.+|||||+++++|.+++... ..+++.++..++.||++||.|||+.+ ..+||+|||+++.....
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred cEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999999764 47999999999999999999999763 37899999999876543
Q ss_pred CCcc-eeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhc
Q 041821 595 SNSS-QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 595 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (736)
.... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... .... ..+..+
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~---------~~~~----~~~~~~- 266 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN---------HEVM----KAINDG- 266 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---------HHHH----HHHHTT-
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH---------HHHH----HHHHCC-
Confidence 2211 1223446789999999999999999999999999999999 9999863211 1111 111111
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
.....+...+..+.+++.+||+.||++||++.+|+++|+++...
T Consensus 267 -----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 267 -----------FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp -----------CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -----------CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 01111223456788999999999999999999999999987543
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=333.03 Aligned_cols=238 Identities=23% Similarity=0.289 Sum_probs=183.7
Q ss_pred hhccc-ccCeeceeEEEEeeeC---CCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 464 KSFKE-ELGRGGSGAVYKGVLA---DGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 464 ~~~~~-~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
+.+.+ +||+|+||.||+|... ++..||||+++.. ....+.+.+|+++|++++|||||++++++.. +..+||||
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E 415 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVME 415 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEE
Confidence 34444 7999999999999853 4567999999763 2456789999999999999999999999976 56899999
Q ss_pred cCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCcc-e
Q 041821 538 YVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSS-Q 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~-~ 599 (736)
||++|+|.+++.... .+++..+..++.||++||.|||++++ .+||+|||+++.+....... .
T Consensus 416 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 416 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp CCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred eCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 999999999997544 69999999999999999999997643 68999999998765433211 1
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... .. . ...+..+
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~------~~---~----~~~i~~~------- 555 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG------PE---V----MAFIEQG------- 555 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS------HH---H----HHHHHTT-------
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH------HH---H----HHHHHcC-------
Confidence 223446789999999998899999999999999999998 9999874321 01 1 1111111
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
.....+...+..+.+|+.+||+.||++||++.+|++.|+.+...
T Consensus 556 -----~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 556 -----KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred -----CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 11122334557889999999999999999999999999986543
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=300.57 Aligned_cols=234 Identities=22% Similarity=0.282 Sum_probs=188.2
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
..|.+.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 56888999999999999999954 58999999996533 234668899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCcccccCCCCCcc
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~~~~~~~~~~ 598 (736)
|+++++|.+.+.....+++..+..++.|++.||.|||+.++ .+||+|||++........
T Consensus 86 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~-- 163 (284)
T 3kk8_A 86 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-- 163 (284)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB--
T ss_pred cCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc--
Confidence 99999999998877789999999999999999999997632 389999999987654332
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ....... ..+. ..
T Consensus 164 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~---------~~~~~~~----~~~~----~~ 225 (284)
T 3kk8_A 164 -WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ---------HRLYAQI----KAGA----YD 225 (284)
T ss_dssp -CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHH----HHTC----CC
T ss_pred -ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch---------hHHHHHH----Hhcc----cc
Confidence 3346799999999999999999999999999999999999999963211 1111111 1110 00
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+ .....+..+.+++.+||+.||++|||+.|++++
T Consensus 226 ~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 226 YPSP-----EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CCTT-----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CCch-----hhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000 111234568899999999999999999999985
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=305.02 Aligned_cols=247 Identities=15% Similarity=0.140 Sum_probs=191.6
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
..|.+.+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+.+++++ +||||+++++++.+++..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 4678889999999999999994 568999999986432 223578999999999 9999999999999999999999999
Q ss_pred CCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------c-----cEEcccCcccccCCCCCc
Q 041821 540 EKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDEF----------------E-----PKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 540 ~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~-----~kl~DFGla~~~~~~~~~ 597 (736)
+++|.+++... ..+++..+..++.||+.||.|||+.++ . +||+|||+++........
T Consensus 88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~ 166 (330)
T 2izr_A 88 -GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETK 166 (330)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTC
T ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCC
Confidence 99999999763 579999999999999999999997632 2 999999999876543322
Q ss_pred c-----eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhc
Q 041821 598 S-----QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 598 ~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (736)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .......+.......
T Consensus 167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~------~~~~~~~i~~~~~~~- 239 (330)
T 2izr_A 167 KHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT------LKERYQKIGDTKRAT- 239 (330)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS------HHHHHHHHHHHHHHS-
T ss_pred ccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc------HHHHHHHHHhhhccC-
Confidence 1 1245679999999999999999999999999999999999999997543211 111111111100000
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccc
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (736)
..+.. .. ..+ .+.+++.+||+.||.+||++++|++.|+++.+...
T Consensus 240 ---~~~~~----~~----~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~ 284 (330)
T 2izr_A 240 ---PIEVL----CE----NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKG 284 (330)
T ss_dssp ---CHHHH----TT----TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ---CHHHH----hc----cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 00000 00 012 78899999999999999999999999998765543
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=304.69 Aligned_cols=235 Identities=23% Similarity=0.254 Sum_probs=189.2
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc-------ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH-------QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
...|.+.+.||+|+||.||+|+.. +++.||||.+.... ...+.+.+|+.++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467899999999999999999954 58999999985432 1357789999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------C----ccEEcccCcccccC
Q 041821 533 LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------F----EPKIADFGLAKLSQ 592 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~----~~kl~DFGla~~~~ 592 (736)
++||||+++++|.+++.....+++..+..++.|++.||.|||+.+ . .+||+|||+++...
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~ 170 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence 999999999999999988778999999999999999999999752 1 58999999998765
Q ss_pred CCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhc
Q 041821 593 RGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (736)
.... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ..... .+....
T Consensus 171 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---------~~~~~----~i~~~~ 234 (321)
T 2a2a_A 171 DGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK---------QETLA----NITSVS 234 (321)
T ss_dssp TTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH---------HHHHH----HHHTTC
T ss_pred cccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH---------HHHHH----HHHhcc
Confidence 5332 3445699999999999999999999999999999999999999964321 01111 111100
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...++... ...+..+.+++.+||+.||++|||+.|++++
T Consensus 235 -----~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 235 -----YDFDEEFF----SHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp -----CCCCHHHH----TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred -----cccChhhh----cccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000 1123568899999999999999999999986
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=298.47 Aligned_cols=231 Identities=19% Similarity=0.260 Sum_probs=166.5
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|.+.+.||+|+||.||+|+. .+++.||||.+.... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 4678889999999999999995 568999999996432 23467889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcce
Q 041821 537 EYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 537 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~ 599 (736)
||+++++|.+++... ..+++..+..++.|+++||.|||+. +..+||+|||++.........
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~-- 168 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK-- 168 (278)
T ss_dssp ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-------
T ss_pred ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCc--
Confidence 999999999999865 4799999999999999999999975 347899999999876543221
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||........ ...+
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------------------------~~~~ 224 (278)
T 3cok_A 169 HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT------------------------LNKV 224 (278)
T ss_dssp -----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------------------------C
T ss_pred ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH------------------------HHHH
Confidence 2345789999999999998999999999999999999999999974321110 1111
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..... ..+...+..+.+++.+||+.||++|||+++++++
T Consensus 225 ~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 225 VLADY--EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp CSSCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhccc--CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 11111 1122234578899999999999999999999875
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-35 Score=320.53 Aligned_cols=237 Identities=16% Similarity=0.169 Sum_probs=186.4
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
....|++.+.||+|+||.||+|+.. +++.||||++++.. ...+.+.+|+.+++.++|||||++++++.+.+..+|
T Consensus 67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 146 (410)
T 3v8s_A 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM 146 (410)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 4567888999999999999999964 58899999996522 223457899999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~ 598 (736)
||||+++|+|.+++... .+++..+..++.||+.||.|||+. +..+||+|||+++....... .
T Consensus 147 V~E~~~gg~L~~~l~~~-~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~-~ 224 (410)
T 3v8s_A 147 VMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM-V 224 (410)
T ss_dssp EECCCTTEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE-E
T ss_pred EEeCCCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc-c
Confidence 99999999999998764 589999999999999999999975 34789999999987654332 1
Q ss_pred eeecccccCcccChhcccCCC----CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLP----ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.....+||+.|||||++.+.. ++.++|||||||++|||++|+.||..... . .....+. ...
T Consensus 225 ~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~----~~~~~i~----~~~-- 289 (410)
T 3v8s_A 225 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----V----GTYSKIM----NHK-- 289 (410)
T ss_dssp ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-----H----HHHHHHH----THH--
T ss_pred cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-----h----hHHHHHH----hcc--
Confidence 234578999999999998765 88999999999999999999999974321 1 1111111 100
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSK--RPTMDSVVQS 720 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 720 (736)
..+.-+ .....+..+.+|+.+||+.+|++ ||++.||++|
T Consensus 290 --~~~~~p-----~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 290 --NSLTFP-----DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp --HHCCCC-----TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred --ccccCC-----CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 000000 01122457889999999999988 9999999987
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=299.28 Aligned_cols=251 Identities=14% Similarity=0.138 Sum_probs=195.2
Q ss_pred HHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEe
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 537 (736)
....|.+.+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+.+++++ +|+|++++++++.++...++|||
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 345688899999999999999994 568999999985432 234577899999999 79999999999999999999999
Q ss_pred cCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC---------------------ccEEcccCcccccCCCC
Q 041821 538 YVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF---------------------EPKIADFGLAKLSQRGS 595 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~---------------------~~kl~DFGla~~~~~~~ 595 (736)
|+ +++|.+++.... .+++..+..++.||++||.|||+.++ .+||+|||+++......
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~ 165 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence 99 999999998654 69999999999999999999997632 29999999998776543
Q ss_pred Ccc-----eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhh
Q 041821 596 NSS-----QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILY 670 (736)
Q Consensus 596 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (736)
... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........ .. ....+......
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~----~~~~~~~~~~~ 239 (298)
T 1csn_A 166 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN--KQ----KYERIGEKKQS 239 (298)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--HH----HHHHHHHHHHH
T ss_pred ccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--HH----HHHHHHhhccC
Confidence 221 13456799999999999999999999999999999999999999975432211 11 11111111000
Q ss_pred hccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccccc
Q 041821 671 EEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEI 730 (736)
Q Consensus 671 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 730 (736)
.. ..+. .. ..+..+.+++.+||+.||++||++++|++.|+++.++...
T Consensus 240 ~~---~~~~-----~~----~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~ 287 (298)
T 1csn_A 240 TP---LREL-----CA----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT 287 (298)
T ss_dssp SC---HHHH-----TT----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred cc---HHHH-----Hh----hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC
Confidence 00 0000 01 1235788999999999999999999999999998765443
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=305.75 Aligned_cols=244 Identities=24% Similarity=0.310 Sum_probs=179.4
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC----CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR 530 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 530 (736)
.+....|.+.+.||+|+||.||+|+.. .+..||||+++... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 345677888999999999999999853 24589999997532 33466889999999999999999999998755
Q ss_pred e-----EEEEEecCCCCCHhhhcc------cCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEc
Q 041821 531 H-----RLLIYEYVEKQSLDKHLF------SSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIA 583 (736)
Q Consensus 531 ~-----~~lv~e~~~~gsL~~~l~------~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~ 583 (736)
. .++||||+++++|.+++. ....+++..+..++.||++||.|||+.+ ..+||+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEEC
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEe
Confidence 3 499999999999999983 3347999999999999999999999763 378999
Q ss_pred ccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHH
Q 041821 584 DFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVR 662 (736)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 662 (736)
|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |..||...... ....
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---------~~~~ 260 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH---------EMYD 260 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---------GHHH
T ss_pred ecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH---------HHHH
Confidence 9999987654433222344567889999999999999999999999999999999 88888643211 0111
Q ss_pred HHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 663 EVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
.. ..+. ....+...+..+.+++.+||+.||++|||+.+|+++|+++.+
T Consensus 261 ~~----~~~~------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 261 YL----LHGH------------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp HH----HTTC------------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH----HcCC------------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11 0100 111122334678899999999999999999999999998764
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=322.33 Aligned_cols=231 Identities=22% Similarity=0.214 Sum_probs=179.1
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|++.+.||+|+||.||+|+. .+++.||||+++.. ......+.+|+.+|+.++||||+++++++.+.+..+|||
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 227 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence 5688899999999999999994 46899999999643 233356788999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhc-CC----------------CccEEcccCcccccCCCCCcce
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH-DE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~-~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
||+++|+|.+++.....+++..+..++.||++||+|||+ .+ ..+||+|||+++....... .
T Consensus 228 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--~ 305 (446)
T 4ejn_A 228 EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--T 305 (446)
T ss_dssp CCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC------
T ss_pred eeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc--c
Confidence 999999999999887789999999999999999999997 53 3789999999986433222 2
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+ ....
T Consensus 306 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---------~~~~~~i----~~~~------- 365 (446)
T 4ejn_A 306 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---------EKLFELI----LMEE------- 365 (446)
T ss_dssp -CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHH----HHCC-------
T ss_pred cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH---------HHHHHHH----HhCC-------
Confidence 4457899999999999999999999999999999999999999964311 1111111 1110
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
..++...+..+.+|+.+||+.||++|| ++.|+++|
T Consensus 366 ------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 366 ------IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ------CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 011222346788999999999999999 99999875
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=300.86 Aligned_cols=241 Identities=22% Similarity=0.274 Sum_probs=185.9
Q ss_pred hhhcccccCeeceeEEEEeeeCC----CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE-EEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR-LLI 535 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv 535 (736)
.+...+.||+|+||.||+|+..+ +..||+|.+.... ...+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 34456899999999999998432 2379999997533 3446789999999999999999999999876655 999
Q ss_pred EecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC--
Q 041821 536 YEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN-- 596 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~-- 596 (736)
|||+.+++|.+++... ..+++..+..++.|++.||.|||+.+ ..+||+|||+++.......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 181 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc
Confidence 9999999999999773 47899999999999999999999763 3789999999986544321
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
........+|+.|+|||.+.+..++.++||||||+++|||++|..|+....... . ..... ...
T Consensus 182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~-----~---~~~~~----~~~----- 244 (298)
T 3pls_A 182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF-----D---LTHFL----AQG----- 244 (298)
T ss_dssp SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG-----G---HHHHH----HTT-----
T ss_pred cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH-----H---HHHHh----hcC-----
Confidence 112334568899999999999999999999999999999999766654322111 0 11110 000
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
.....+...+..+.+++.+||+.||.+|||+.++++.|+++.+.
T Consensus 245 -------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 245 -------RRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp -------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -------CCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 01111222345788999999999999999999999999987654
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=302.34 Aligned_cols=261 Identities=23% Similarity=0.299 Sum_probs=198.6
Q ss_pred ccccHHHHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhc--CCCCceeeEEEEEEeC
Q 041821 452 RRFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGK--IYHMNLVRMWGFCSEG 529 (736)
Q Consensus 452 ~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~ 529 (736)
..+...+....+|.+.+.||+|+||.||+|+. +++.||||++... ..+.+.+|++++.. ++||||+++++++...
T Consensus 32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred CceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 34455677788999999999999999999998 5899999999643 34567788888877 7899999999999887
Q ss_pred C----eEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhh--------cC----------------CCccE
Q 041821 530 R----HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH--------HD----------------EFEPK 581 (736)
Q Consensus 530 ~----~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH--------~~----------------~~~~k 581 (736)
. ..++||||+++|+|.+++... .+++.++..++.|++.||.||| +. +..+|
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~k 187 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 187 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEE
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEE
Confidence 6 789999999999999999764 5899999999999999999999 43 34789
Q ss_pred EcccCcccccCCCCCcc--eeecccccCcccChhcccCC------CCccccceechhHHHHHHHhC----------CCCC
Q 041821 582 IADFGLAKLSQRGSNSS--QFSQIRGTKGYMAPEWASNL------PITAKVDVYSYGVVILEMVKG----------IRLS 643 (736)
Q Consensus 582 l~DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwS~Gvvl~el~tg----------~~p~ 643 (736)
|+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++| ..||
T Consensus 188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~ 267 (342)
T 1b6c_B 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 267 (342)
T ss_dssp ECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCc
Confidence 99999998765543221 12345799999999999865 344799999999999999999 5666
Q ss_pred CccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCC-CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 041821 644 NWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGK-FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLL 722 (736)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 722 (736)
......... ... +.... ......+.+... ........+.+|+.+||+.||++|||+.+|+++|+
T Consensus 268 ~~~~~~~~~----~~~----~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 268 YDLVPSDPS----VEE----MRKVV-------CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp TTTSCSSCC----HHH----HHHHH-------TTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred cccCcCccc----HHH----HHHHH-------HHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 533221111 011 11111 111112221111 12356778999999999999999999999999999
Q ss_pred ccccccccc
Q 041821 723 ECETESEIH 731 (736)
Q Consensus 723 ~~~~~~~~~ 731 (736)
++.++..+.
T Consensus 333 ~i~~~~~~~ 341 (342)
T 1b6c_B 333 QLSQQEGIK 341 (342)
T ss_dssp HHHHTTC--
T ss_pred HHHHHhcCC
Confidence 998766543
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=312.86 Aligned_cols=263 Identities=13% Similarity=0.118 Sum_probs=187.3
Q ss_pred HhhhhcccccCee--ceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 461 KSTKSFKEELGRG--GSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 461 ~~~~~~~~~lG~G--~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
..+|++.+.||+| +||.||+|+.. +++.||||++.... ...+.+.+|+.++++++|||||++++++.+++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3578899999999 99999999964 68999999996543 334567889999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCC
Q 041821 535 IYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~ 596 (736)
|||||++|+|.+++... ..+++..+..++.||+.||.|||+. +..+||+|||++........
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~ 183 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ 183 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccc
Confidence 99999999999999765 5799999999999999999999975 33789999999865432211
Q ss_pred c-----ceeecccccCcccChhcccC--CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 597 S-----SQFSQIRGTKGYMAPEWASN--LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 597 ~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ................
T Consensus 184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~ 262 (389)
T 3gni_B 184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML-LEKLNGTVPCLLDTST 262 (389)
T ss_dssp ECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH-HHC-------------
T ss_pred cccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH-HHHhcCCCCccccccc
Confidence 1 11223478999999999987 57999999999999999999999999753322110 0000000000000000
Q ss_pred -hhc-----------ccccccccc---C------ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hhcc
Q 041821 670 -YEE-----------EAWIEEIVD---P------RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS--LLEC 724 (736)
Q Consensus 670 -~~~-----------~~~~~~~~d---~------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~ 724 (736)
... .......+. + ......+......+.+|+.+||+.||++|||+.|++++ +..+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 000 000000000 0 00001223345679999999999999999999999977 4443
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=306.23 Aligned_cols=226 Identities=20% Similarity=0.243 Sum_probs=186.8
Q ss_pred HHhhhhcccccCeeceeEEEEee-eCCCcEEEEEEeCcccc---------cHHHHHHHHHHHhcCCCCceeeEEEEEEeC
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQ---------GEEVFWAEVSTIGKIYHMNLVRMWGFCSEG 529 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 529 (736)
....|.+.+.||+|+||.||+|+ ..+++.||||+++.... ..+.+.+|+.+|++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 34678899999999999999998 45689999999965321 223567899999999999999999999999
Q ss_pred CeEEEEEecCCCC-CHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccC
Q 041821 530 RHRLLIYEYVEKQ-SLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQ 592 (736)
Q Consensus 530 ~~~~lv~e~~~~g-sL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~ 592 (736)
+..++||||+..| +|.+++.....+++..+..++.||+.||.|||+. +..+||+|||+++...
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 181 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE 181 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECC
Confidence 9999999999777 9999998888899999999999999999999975 3478999999998775
Q ss_pred CCCCcceeecccccCcccChhcccCCCC-ccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 593 RGSNSSQFSQIRGTKGYMAPEWASNLPI-TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
.... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 182 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------------------- 236 (335)
T 3dls_A 182 RGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------------------- 236 (335)
T ss_dssp TTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG----------------------
T ss_pred CCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH----------------------
Confidence 5432 344679999999999988876 88999999999999999999999632110
Q ss_pred ccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 672 EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 672 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......+ +...+..+.+|+.+||+.||++|||+.+++++
T Consensus 237 ----~~~~~~~------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 ----VEAAIHP------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----TTTCCCC------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----HhhccCC------CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111111 11134568899999999999999999999987
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=301.16 Aligned_cols=241 Identities=24% Similarity=0.305 Sum_probs=183.5
Q ss_pred hhhhcccccCeeceeEEEEeeeCC----CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEE-eCCeEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCS-EGRHRLL 534 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~l 534 (736)
..|.+.+.||+|+||.||+|+..+ ...+|+|.+.... ...+.+.+|+.++++++||||+++++++. .++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 346788999999999999998533 2368999997533 34467899999999999999999999865 4567899
Q ss_pred EEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 535 IYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
||||+++|+|.+++... ..+++..+..++.|+++||.|||+.+ ..+||+|||+++........
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 184 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 184 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchh
Confidence 99999999999999764 36899999999999999999999763 37899999999866543221
Q ss_pred --ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCC-CCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 598 --SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI-RLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 598 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.......||+.|+|||.+.+..++.++||||||+++|||++|. +||.... ..+ .... .....
T Consensus 185 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-~~~--------~~~~----~~~~~-- 249 (298)
T 3f66_A 185 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-TFD--------ITVY----LLQGR-- 249 (298)
T ss_dssp BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC-TTT--------HHHH----HHTTC--
T ss_pred ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC-HHH--------HHHH----HhcCC--
Confidence 1233456788999999999999999999999999999999955 4443221 111 0000 00000
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
....+...+..+.+++.+||+.||++|||+.++++.|+++...
T Consensus 250 ----------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 250 ----------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp ----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ----------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 0111222345788999999999999999999999999988654
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=302.96 Aligned_cols=251 Identities=23% Similarity=0.252 Sum_probs=182.6
Q ss_pred HHHHHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc------ccHHHHHHHHHHHhcCC---CCceeeEEEEE
Q 041821 457 AELKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH------QGEEVFWAEVSTIGKIY---HMNLVRMWGFC 526 (736)
Q Consensus 457 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~---h~niv~l~~~~ 526 (736)
.++...+|++.++||+|+||.||+|+. .+++.||||++.... .....+.+|+.++++++ ||||+++++++
T Consensus 4 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~ 83 (308)
T 3g33_A 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVC 83 (308)
T ss_dssp ------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred CcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeee
Confidence 345667899999999999999999994 568999999986322 12345677888777764 99999999999
Q ss_pred EeCC-----eEEEEEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEc
Q 041821 527 SEGR-----HRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIA 583 (736)
Q Consensus 527 ~~~~-----~~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~ 583 (736)
.... ..++||||+. ++|.+++.... .+++..+..++.||+.||+|||+.+ ..+||+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 84 ATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp EECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred eccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEe
Confidence 8765 5799999997 69999998765 3999999999999999999999763 368999
Q ss_pred ccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHH
Q 041821 584 DFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVRE 663 (736)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 663 (736)
|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .... ..
T Consensus 163 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~----~~ 230 (308)
T 3g33_A 163 DFGLARIYSYQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-----ADQL----GK 230 (308)
T ss_dssp SCSCTTTSTTCCC---SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH-----HHHH----HH
T ss_pred eCccccccCCCcc---cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHH----HH
Confidence 9999987654332 3456799999999999999999999999999999999999999964321 1111 11
Q ss_pred HHHHHhhhc-cccccccc--cCccC--CCC-----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 664 VKRKILYEE-EAWIEEIV--DPRLK--GKF-----NTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 664 ~~~~~~~~~-~~~~~~~~--d~~~~--~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+........ ..+..... ..... ... .+.....+.+|+.+||+.||++|||+.|+++|
T Consensus 231 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 231 IFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp HHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 111111100 00000000 00000 000 11234678899999999999999999999986
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=309.46 Aligned_cols=238 Identities=20% Similarity=0.220 Sum_probs=181.0
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc------cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL------HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
..+|.+.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 46789999999999999999995 45889999998643 234467899999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhccc----------------------------------------CCCCCHHHHHHHHHHHHHHhhhh
Q 041821 534 LIYEYVEKQSLDKHLFS----------------------------------------SYFLGWKERFKVALGTAKGLAYL 573 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~----------------------------------------~~~l~~~~~~~i~~~i~~gL~yL 573 (736)
+||||+++|+|.+++.. ...+++..+..++.||++||.||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999852 11235777889999999999999
Q ss_pred hcCC------------------CccEEcccCcccccCCCCCc--ceeecccccCcccChhcccC--CCCccccceechhH
Q 041821 574 HHDE------------------FEPKIADFGLAKLSQRGSNS--SQFSQIRGTKGYMAPEWASN--LPITAKVDVYSYGV 631 (736)
Q Consensus 574 H~~~------------------~~~kl~DFGla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gv 631 (736)
|+.+ ..+||+|||+++.+...... .......||+.|+|||++.+ ..++.++|||||||
T Consensus 185 H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~ 264 (345)
T 3hko_A 185 HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264 (345)
T ss_dssp HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHH
T ss_pred HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHH
Confidence 9652 26899999999865432211 12345679999999999875 67899999999999
Q ss_pred HHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCC
Q 041821 632 VILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKR 711 (736)
Q Consensus 632 vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 711 (736)
++|||++|+.||...... ....... ... .....+ .....+..+.+++.+||+.||++|
T Consensus 265 il~el~~g~~pf~~~~~~---------~~~~~~~----~~~----~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~R 322 (345)
T 3hko_A 265 LLHLLLMGAVPFPGVNDA---------DTISQVL----NKK----LCFENP-----NYNVLSPLARDLLSNLLNRNVDER 322 (345)
T ss_dssp HHHHHHHSSCSSCCSSHH---------HHHHHHH----HCC----CCTTSG-----GGGGSCHHHHHHHHHHSCSCTTTS
T ss_pred HHHHHHHCCCCCCCCChH---------HHHHHHH----hcc----cccCCc-----ccccCCHHHHHHHHHHcCCChhHC
Confidence 999999999999643211 0111111 000 000001 011234578899999999999999
Q ss_pred CCHHHHHHH
Q 041821 712 PTMDSVVQS 720 (736)
Q Consensus 712 Ps~~evl~~ 720 (736)
||+.+++++
T Consensus 323 ps~~~~l~h 331 (345)
T 3hko_A 323 FDAMRALQH 331 (345)
T ss_dssp CCHHHHHHS
T ss_pred CCHHHHhcC
Confidence 999999986
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=301.83 Aligned_cols=251 Identities=23% Similarity=0.278 Sum_probs=173.8
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
..|++.+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 4678889999999999999995 458999999986432 3346788999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccC------CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCC
Q 041821 539 VEKQSLDKHLFSS------YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 539 ~~~gsL~~~l~~~------~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~ 596 (736)
++ ++|.+++... ..+++..+..++.||++||.|||+. +..+||+|||+++.......
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 163 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN 163 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc
Confidence 98 6999888642 3589999999999999999999975 34789999999987654322
Q ss_pred cceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ..... .+...........
T Consensus 164 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~----~i~~~~~~~~~~~ 232 (317)
T 2pmi_A 164 --TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND-----EEQLK----LIFDIMGTPNESL 232 (317)
T ss_dssp --CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHH----HHHHHHCSCCTTT
T ss_pred --cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHH----HHHHHhCCCChhH
Confidence 1344578999999999976 4689999999999999999999999974321 11111 1111110000000
Q ss_pred cccc-----ccCccC------------CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hhcc
Q 041821 676 IEEI-----VDPRLK------------GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS--LLEC 724 (736)
Q Consensus 676 ~~~~-----~d~~~~------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~ 724 (736)
.... ..+... ..........+.+++.+||+.||++|||+.|++++ +.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 300 (317)
T 2pmi_A 233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEY 300 (317)
T ss_dssp CGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred hhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcc
Confidence 0000 000000 00011123578899999999999999999999986 4443
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=308.69 Aligned_cols=230 Identities=25% Similarity=0.275 Sum_probs=181.7
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
...|...+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.+|++++||||+++++++.+++..+||
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 35578889999999999999994 568999999996432 2235688999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc
Q 041821 536 YEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
|||+. |+|.+++.. ...+++..+..++.|+++||.|||+.+ ..+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~----- 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----- 206 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-----
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC-----
Confidence 99997 688887753 457999999999999999999999763 3689999999986643
Q ss_pred eeecccccCcccChhccc---CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 599 QFSQIRGTKGYMAPEWAS---NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||..... .. ..... ....
T Consensus 207 -~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~--------~~-~~~~~----~~~~--- 269 (348)
T 1u5q_A 207 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------MS-ALYHI----AQNE--- 269 (348)
T ss_dssp -BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HH-HHHHH----HHSC---
T ss_pred -CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--------HH-HHHHH----HhcC---
Confidence 23456999999999985 56789999999999999999999999863311 00 00111 0000
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
.+.. .+...+..+.+++.+||+.||++|||+.+++++.
T Consensus 270 -----~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 270 -----SPAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp -----CCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred -----CCCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 1111 1112245688999999999999999999998764
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=297.88 Aligned_cols=233 Identities=23% Similarity=0.288 Sum_probs=180.3
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
...|.+.+.||+|+||.||+++. .++..||+|++.... ...+.+.+|+++|++++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 36788999999999999999995 458899999996533 345788999999999999999999999999999999999
Q ss_pred cCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcCC-------------------CccEEcccCcccccCCC
Q 041821 538 YVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHDE-------------------FEPKIADFGLAKLSQRG 594 (736)
Q Consensus 538 ~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~~-------------------~~~kl~DFGla~~~~~~ 594 (736)
|+++++|.+++.. ...+++..+..++.|+++||.|||+.+ ..+||+|||+++.....
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc
Confidence 9999999998854 357999999999999999999999763 25899999999876543
Q ss_pred CCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.. .....||+.|+|||++. ..++.++||||||+++|||++|+.||..... ..... ......
T Consensus 181 ~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~---------~~~~~----~~~~~~-- 241 (285)
T 3is5_A 181 EH---STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL---------EEVQQ----KATYKE-- 241 (285)
T ss_dssp ---------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHH----HHHHCC--
T ss_pred cc---CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH---------HHHHh----hhccCC--
Confidence 22 34567999999999886 4689999999999999999999999974321 11111 111100
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+..... .......+.+++.+||+.||++|||+.||+++
T Consensus 242 -------~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 242 -------PNYAVE-CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp -------CCCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred -------cccccc-cCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 00123567889999999999999999999875
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=300.85 Aligned_cols=250 Identities=19% Similarity=0.275 Sum_probs=183.1
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccc---cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQ---GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.+|.+.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 46788999999999999999964 489999999865432 24567899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|+++++|.+++.....+++..+..++.|++.||.|||+. +..+||+|||+++....... ...
T Consensus 83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~ 160 (311)
T 4agu_A 83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD--YYD 160 (311)
T ss_dssp CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc--ccC
Confidence 999999999988777899999999999999999999975 33789999999987654322 134
Q ss_pred cccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHH-------HHHHhhhcc
Q 041821 602 QIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV-------KRKILYEEE 673 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 673 (736)
...||+.|+|||++.+ ..++.++||||||+++|||++|+.||...... .......... ..... ..
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~ 233 (311)
T 4agu_A 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV-----DQLYLIRKTLGDLIPRHQQVFS--TN 233 (311)
T ss_dssp -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHHHCSCCHHHHHHHH--TC
T ss_pred CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhcccccccccccc--cc
Confidence 5578999999999876 56899999999999999999999999743211 1111111100 00000 00
Q ss_pred ccccccccCccCCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFN-----TNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+......+......+ +..+..+.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0011111111110001 1234568899999999999999999999986
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=306.33 Aligned_cols=243 Identities=25% Similarity=0.328 Sum_probs=188.9
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcE--EEEEEeCcc--cccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRA--VAVKRLGDL--HQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~--vavK~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 533 (736)
....|.+.+.||+|+||.||+|+.. ++.. +|||.++.. ....+.+.+|+.+++++ +||||+++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred cHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 3467889999999999999999953 4554 499998642 23445688999999999 8999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCC----------------CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccE
Q 041821 534 LIYEYVEKQSLDKHLFSSY----------------FLGWKERFKVALGTAKGLAYLHHDE----------------FEPK 581 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~k 581 (736)
+||||+++++|.+++.... .+++.++..++.||++||.|||+.+ ..+|
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~k 182 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 182 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEE
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEE
Confidence 9999999999999997653 6899999999999999999999763 2689
Q ss_pred EcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHH
Q 041821 582 IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRF 660 (736)
Q Consensus 582 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~ 660 (736)
|+|||+++...... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ..
T Consensus 183 L~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~---------~~- 249 (327)
T 1fvr_A 183 IADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---------AE- 249 (327)
T ss_dssp ECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH---------HH-
T ss_pred EcccCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH---------HH-
Confidence 99999997433211 1233457889999999998889999999999999999998 9999864321 01
Q ss_pred HHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccccc
Q 041821 661 VREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEI 730 (736)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 730 (736)
....+..+ .....+...+..+.+++.+||+.||++|||+.+++++|+.+.++...
T Consensus 250 ---~~~~~~~~------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 304 (327)
T 1fvr_A 250 ---LYEKLPQG------------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304 (327)
T ss_dssp ---HHHHGGGT------------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred ---HHHHhhcC------------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcC
Confidence 11111111 11112223346788999999999999999999999999988765543
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=313.07 Aligned_cols=240 Identities=24% Similarity=0.327 Sum_probs=175.8
Q ss_pred hhhcccccCeeceeEEEEeeeC--C--CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEe-CCeEEEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVLA--D--GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE-GRHRLLI 535 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~--~--~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv 535 (736)
.|.+.+.||+|+||.||+|+.. + +..||||.++... ...+.+.+|+.++++++||||+++++++.+ ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3567789999999999999853 2 2468999986533 345678999999999999999999998754 5578999
Q ss_pred EecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc
Q 041821 536 YEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
|||+++|+|.+++.... .+++..+..++.||++||.|||+.+ ..+||+|||+++.........
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 249 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 249 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccccccc
Confidence 99999999999997654 6899999999999999999999763 378999999998664432211
Q ss_pred --eeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 599 --QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 599 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
......+|+.|+|||++.+..++.++|||||||++|||++ |.+||...... + .... ...+.
T Consensus 250 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~-~--------~~~~----~~~~~--- 313 (373)
T 3c1x_A 250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-D--------ITVY----LLQGR--- 313 (373)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS-C--------HHHH----HHTTC---
T ss_pred ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH-H--------HHHH----HHcCC---
Confidence 1234557889999999999999999999999999999999 56666533211 1 0000 11110
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
....+...+..+.+++.+||+.||++|||+.+|+++|+++...
T Consensus 314 ---------~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 314 ---------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp ---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 0111222345788999999999999999999999999987543
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=314.97 Aligned_cols=259 Identities=19% Similarity=0.239 Sum_probs=197.7
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC--eEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR--HRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 536 (736)
..|.+.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+++|++++||||+++++++.+.. ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 46788999999999999999964 48999999997533 44577889999999999999999999998765 779999
Q ss_pred ecCCCCCHhhhcccCC---CCCHHHHHHHHHHHHHHhhhhhcCCC--------------------ccEEcccCcccccCC
Q 041821 537 EYVEKQSLDKHLFSSY---FLGWKERFKVALGTAKGLAYLHHDEF--------------------EPKIADFGLAKLSQR 593 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~---~l~~~~~~~i~~~i~~gL~yLH~~~~--------------------~~kl~DFGla~~~~~ 593 (736)
||+++|+|.+++.... .+++..+..++.||+.||.|||+.++ .+||+|||+++....
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 9999999999997644 39999999999999999999997632 379999999987654
Q ss_pred CCCcceeecccccCcccChhcccC--------CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASN--------LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK 665 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (736)
... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ........
T Consensus 169 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~-----~~~~~~~~ 240 (396)
T 4eut_A 169 DEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN-----KEVMYKII 240 (396)
T ss_dssp GGG---SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC-----HHHHHHHH
T ss_pred CCc---cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch-----HHHHHHHh
Confidence 322 344679999999999864 56788999999999999999999999744322211 11111111
Q ss_pred HHHhhhccccccccc--------cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 666 RKILYEEEAWIEEIV--------DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 666 ~~~~~~~~~~~~~~~--------d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
............... +.......+......+.+++.+||+.||++||++.++++.|+.+.+..
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 111100000000000 011122345778889999999999999999999999999999887654
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-34 Score=321.01 Aligned_cols=235 Identities=19% Similarity=0.223 Sum_probs=188.3
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
....|.+.+.||+|+||.||+|+.. +++.||||++... ......+.+|+.+|++++||||+++++++.+....++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3578999999999999999999954 6899999999642 34467789999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCcccccCCCCC
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~~~~~~~~ 596 (736)
|||+++++|.+.+.....+++..+..++.||+.||.|||+.++ .+||+|||+++.......
T Consensus 100 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 179 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (486)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc
Confidence 9999999999999877789999999999999999999997632 589999999987654332
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
.....||+.|+|||++.+ .++.++|||||||++|||++|+.||..... ...... +..+. .
T Consensus 180 ---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~~----i~~~~---~ 239 (486)
T 3mwu_A 180 ---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE---------YDILKR----VETGK---Y 239 (486)
T ss_dssp -----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHH----HHHTC---C
T ss_pred ---cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHH----HHhCC---C
Confidence 345679999999999876 599999999999999999999999964321 111111 11111 0
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. .+ .......+..+.+++.+||+.||++|||+.+++++
T Consensus 240 ~--~~----~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 240 A--FD----LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp C--SC----SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred C--CC----CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 00 00011234578899999999999999999999986
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=299.13 Aligned_cols=240 Identities=23% Similarity=0.290 Sum_probs=185.5
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCC----CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
...+|.+.+.||+|+||.||+|+... +..||||.+.... ...+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 34678889999999999999998533 3469999997642 345678999999999999999999999865 4568
Q ss_pred EEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCC
Q 041821 534 LIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~ 596 (736)
+||||+++++|.+++.... .+++..+..++.|+++||.|||+.++ .+||+|||+++.......
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 168 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccc
Confidence 9999999999999997643 69999999999999999999997643 689999999987654332
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
. ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... . ...... ...
T Consensus 169 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~------~---~~~~~~----~~~--- 231 (281)
T 3cc6_A 169 Y-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK------D---VIGVLE----KGD--- 231 (281)
T ss_dssp -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG------G---HHHHHH----HTC---
T ss_pred c-ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH------H---HHHHHh----cCC---
Confidence 1 1234457889999999998899999999999999999998 99998643211 0 111111 000
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
. ...+...+..+.+++.+||+.||++|||+.|++++|+.+.+
T Consensus 232 -----~----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 232 -----R----LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp -----C----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----C----CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 0 01122234578899999999999999999999999998754
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=298.84 Aligned_cols=236 Identities=22% Similarity=0.264 Sum_probs=185.8
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc-------ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH-------QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 531 (736)
....|.+.+.||+|+||.||+++.. +++.||||.++... ...+.+.+|+.++++++||||+++++++.+...
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T 3bhy_A 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD 82 (283)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe
Confidence 3467899999999999999999965 58999999985432 236779999999999999999999999999999
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC--------------------ccEEcccCccccc
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF--------------------EPKIADFGLAKLS 591 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~--------------------~~kl~DFGla~~~ 591 (736)
.++||||+++++|.+++.....+++..+..++.||+.||.|||+.++ .+||+|||++...
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 83 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 99999999999999999877789999999999999999999996521 5899999999876
Q ss_pred CCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 592 QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ..... .+...
T Consensus 163 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---------~~~~~----~~~~~ 226 (283)
T 3bhy_A 163 EAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK---------QETLT----NISAV 226 (283)
T ss_dssp C-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH---------HHHHH----HHHTT
T ss_pred cCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch---------HHHHH----HhHhc
Confidence 54322 3445689999999999999999999999999999999999999864321 00111 11110
Q ss_pred ccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 672 EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 672 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ....+.. ....+..+.+++.+||+.||++|||+.+++++
T Consensus 227 ~-----~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 227 N-----YDFDEEY----FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp C-----CCCCHHH----HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred c-----cCCcchh----cccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 0 0000000 01123568899999999999999999999985
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=322.16 Aligned_cols=235 Identities=19% Similarity=0.228 Sum_probs=190.6
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
....|.+.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4568999999999999999999954 6899999998542 3456778999999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC-------------------CccEEcccCcccccCCCC
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE-------------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-------------------~~~kl~DFGla~~~~~~~ 595 (736)
||||+.+|+|.+++.....+++..+..++.||+.||.|||+++ ..+||+|||+++......
T Consensus 104 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 183 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183 (484)
T ss_dssp EECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence 9999999999999988888999999999999999999999753 368999999998775543
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
. .....||+.|+|||++.+ .++.++|||||||++|||++|+.||..... ...... +..+.
T Consensus 184 ~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~~----i~~~~--- 243 (484)
T 3nyv_A 184 K---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE---------YDILKK----VEKGK--- 243 (484)
T ss_dssp S---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHH----HHHCC---
T ss_pred c---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH---------HHHHHH----HHcCC---
Confidence 2 345679999999999876 699999999999999999999999974321 111111 11111
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.. . ........+..+.+|+.+||+.||++|||+.|+++|
T Consensus 244 ~~-~-----~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 244 YT-F-----ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp CC-C-----CSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CC-C-----CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 00 0 000011234678899999999999999999999975
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=309.30 Aligned_cols=255 Identities=15% Similarity=0.178 Sum_probs=189.8
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCC------CcEEEEEEeCccccc------------HHHHHHHHHHHhcCCCCcee
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLAD------GRAVAVKRLGDLHQG------------EEVFWAEVSTIGKIYHMNLV 520 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~------------~~~~~~E~~~l~~l~h~niv 520 (736)
+....|.+.+.||+|+||.||+|+... ++.||||++...... ...+..|+..++.++||||+
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv 111 (364)
T 3op5_A 32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP 111 (364)
T ss_dssp TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence 344578899999999999999998654 478999998653311 02245577778889999999
Q ss_pred eEEEEEEeC----CeEEEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcC------------------C
Q 041821 521 RMWGFCSEG----RHRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHD------------------E 577 (736)
Q Consensus 521 ~l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~------------------~ 577 (736)
++++++... ...+|||||+ +++|.+++... ..+++..+..|+.||+.||.|||+. +
T Consensus 112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~ 190 (364)
T 3op5_A 112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNP 190 (364)
T ss_dssp CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCT
T ss_pred eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCC
Confidence 999999774 4589999999 99999999775 5799999999999999999999965 3
Q ss_pred CccEEcccCcccccCCCCCcc-----eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCcc
Q 041821 578 FEPKIADFGLAKLSQRGSNSS-----QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEG 652 (736)
Q Consensus 578 ~~~kl~DFGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~ 652 (736)
..+||+|||+++.+....... ......||+.|||||++.+..++.++|||||||++|||++|+.||.....+.
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~-- 268 (364)
T 3op5_A 191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP-- 268 (364)
T ss_dssp TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH--
T ss_pred CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH--
Confidence 478999999998765432211 1233559999999999999999999999999999999999999997432211
Q ss_pred chhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccc
Q 041821 653 QEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729 (736)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (736)
............. +.+++++.+.. ...+..+.+++.+||+.||++||++.+|++.|+++.++..
T Consensus 269 ------~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 269 ------KYVRDSKIRYREN----IASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp ------HHHHHHHHHHHHC----HHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ------HHHHHHHHHhhhh----HHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 1111111111110 22222222211 1123578889999999999999999999999998865543
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=331.11 Aligned_cols=233 Identities=24% Similarity=0.316 Sum_probs=182.4
Q ss_pred cccCeeceeEEEEeeeC---CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLA---DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
++||+|+||.||+|.+. .++.||||+++... ...+++.+|+++|++++|||||++++++.+ +..+||||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 37999999999999642 36789999997533 335789999999999999999999999965 558899999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCc-ceeeccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNS-SQFSQIR 604 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~-~~~~~~~ 604 (736)
|+|.+++.....+++..+..|+.||+.||+|||++++ .+||+|||+++.+...... .......
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~ 533 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 533 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------------
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCC
Confidence 9999999888889999999999999999999997643 6899999999877554322 1233345
Q ss_pred ccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 605 gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... .. +...+..+
T Consensus 534 ~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~---------~~----~~~~i~~~------------ 588 (635)
T 4fl3_A 534 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG---------SE----VTAMLEKG------------ 588 (635)
T ss_dssp -CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH---------HH----HHHHHHTT------------
T ss_pred CceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH---------HH----HHHHHHcC------------
Confidence 7889999999999999999999999999999998 9999964321 01 11111111
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
.....+...+..+.+|+.+||+.||++||++.+|++.|+++..
T Consensus 589 ~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 589 ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 1112233445688999999999999999999999999987643
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=301.18 Aligned_cols=245 Identities=18% Similarity=0.184 Sum_probs=182.5
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccc----cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQ----GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
...|.+.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|+.++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467889999999999999999954 688999999965322 236788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|||+++++|.+++.....+++..+..++.|+++||.|||+.+ ..+||+|||++......... .
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~ 191 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT-Q 191 (309)
T ss_dssp EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC------------
T ss_pred EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccc-c
Confidence 999999999999988778999999999999999999999763 36899999999876543221 2
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ... ....... ..
T Consensus 192 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---------~~~----~~~~~~~----~~-- 252 (309)
T 2h34_A 192 LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL---------SVM----GAHINQA----IP-- 252 (309)
T ss_dssp -----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH---------HHH----HHHHHSC----CC--
T ss_pred ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH---------HHH----HHHhccC----CC--
Confidence 3456799999999999999999999999999999999999999973211 111 1111100 00
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhccccccc
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-TMDSVVQSLLECETESE 729 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~~ 729 (736)
.+ ...+...+..+.+++.+||+.||++|| +++++++.|++......
T Consensus 253 -~~---~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 253 -RP---STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp -CG---GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred -Cc---cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 00 011122335688899999999999999 99999999998765543
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=300.21 Aligned_cols=238 Identities=21% Similarity=0.302 Sum_probs=189.0
Q ss_pred HHHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEe-------
Q 041821 457 AELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE------- 528 (736)
Q Consensus 457 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 528 (736)
.......|.+.+.||+|+||.||+|+.. +++.||||++.... +.+.+|++++++++||||+++++++..
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 3445678899999999999999999965 68999999996543 346789999999999999999998865
Q ss_pred ---------CCeEEEEEecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccE
Q 041821 529 ---------GRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPK 581 (736)
Q Consensus 529 ---------~~~~~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~k 581 (736)
....++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+ ..+|
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEE
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEE
Confidence 44579999999999999999653 47999999999999999999999763 3689
Q ss_pred EcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHH
Q 041821 582 IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFV 661 (736)
Q Consensus 582 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~ 661 (736)
|+|||+++....... .....||+.|+|||++.+..++.++||||||+++|||++|..|+... ....
T Consensus 163 l~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----------~~~~ 228 (284)
T 2a19_B 163 IGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-----------SKFF 228 (284)
T ss_dssp ECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-----------HHHH
T ss_pred ECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-----------HHHH
Confidence 999999987765432 33456999999999999999999999999999999999998876411 0111
Q ss_pred HHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccccc
Q 041821 662 REVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEI 730 (736)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 730 (736)
. .. ....+... .+..+.+++.+||+.||++|||+.|++++|+.+....+.
T Consensus 229 ~----~~-----------~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 229 T----DL-----------RDGIISDI----FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp H----HH-----------HTTCCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred H----Hh-----------hccccccc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 1 11 01111111 234678899999999999999999999999988766554
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-34 Score=304.16 Aligned_cols=249 Identities=21% Similarity=0.240 Sum_probs=180.5
Q ss_pred HHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccc---cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQ---GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
...+|.+.++||+|+||.||+|+. .+++.||||+++.... ..+.+.+|+.++++++||||+++++++.+++..+||
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 345788999999999999999984 4689999999965432 235678999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC---------------------ccEEcccCcccccCCC
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF---------------------EPKIADFGLAKLSQRG 594 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------------~~kl~DFGla~~~~~~ 594 (736)
|||++ |+|.+++.....+++..+..++.||+.||.|||+.++ .+||+|||+++.....
T Consensus 112 ~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~ 190 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP 190 (329)
T ss_dssp EECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred EecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence 99998 5999999888889999999999999999999997643 3899999999876543
Q ss_pred CCcceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 595 SNSSQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
.. ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ..... ...........
T Consensus 191 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~----~~~~~~~~~~~ 259 (329)
T 3gbz_A 191 IR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE-----IDQLF----KIFEVLGLPDD 259 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH----HHHHHHCCCCT
T ss_pred cc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH-----HHHHH----HHHHHhCCCch
Confidence 22 23456789999999999874 489999999999999999999999964321 11111 11111110000
Q ss_pred ccccccc--------cCccCCC-----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIV--------DPRLKGK-----FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~--------d~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
....... .+..... .+......+.+|+.+||+.||++|||+.|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 260 TTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0000000 0000000 001123578899999999999999999999875
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-34 Score=294.86 Aligned_cols=229 Identities=22% Similarity=0.264 Sum_probs=183.8
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|.+.+.||+|+||.||+|+.. +++.||||++.... .....+.+|+.++++++||||+++++++.+....++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (279)
T 3fdn_A 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 88 (279)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEE
Confidence 56888999999999999999854 47799999985432 23567889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
||+++++|.+++.....+++..+..++.|++.||.|||+.+ ..+||+|||++....... .
T Consensus 89 e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~----~ 164 (279)
T 3fdn_A 89 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 164 (279)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC---------
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCccc----c
Confidence 99999999999987778999999999999999999999763 378999999986544322 3
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
....||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ....... ...
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---------~~~~~~~----~~~--------- 222 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY---------QETYKRI----SRV--------- 222 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH---------HHHHHHH----HHT---------
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH---------HHHHHHH----HhC---------
Confidence 345789999999999999999999999999999999999999863211 1111111 100
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ...+...+..+.+++.+||+.||++|||+.||+++
T Consensus 223 ~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 223 E----FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp C----CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred C----CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 11122234578899999999999999999999986
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-35 Score=311.67 Aligned_cols=252 Identities=13% Similarity=0.143 Sum_probs=185.4
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC----CCcEEEEEEeCcccc------------cHHHHHHHHHHHhcCCCCceee
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVKRLGDLHQ------------GEEVFWAEVSTIGKIYHMNLVR 521 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~------------~~~~~~~E~~~l~~l~h~niv~ 521 (736)
++....|.+.+.||+|+||.||+|+.. .+..+|||++..... ....+.+|+.+++.++||||++
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~ 112 (345)
T 2v62_A 33 DMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL 112 (345)
T ss_dssp CTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred cccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence 344567889999999999999999964 578899999865321 1123668889999999999999
Q ss_pred EEEEEEe----CCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------C--c
Q 041821 522 MWGFCSE----GRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------F--E 579 (736)
Q Consensus 522 l~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~--~ 579 (736)
+++++.. ....++||||+ +++|.+++.....+++.++..++.||+.||.|||+.+ . .
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 113 FYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTS
T ss_pred eecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCc
Confidence 9999988 78899999999 9999999987778999999999999999999999752 2 7
Q ss_pred cEEcccCcccccCCCCCc-----ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccch
Q 041821 580 PKIADFGLAKLSQRGSNS-----SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQE 654 (736)
Q Consensus 580 ~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~ 654 (736)
+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~---- 267 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP---- 267 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH----
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc----
Confidence 899999999876432211 11234579999999999999999999999999999999999999996332111
Q ss_pred hHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 655 AELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
............ . +...+..... ....+..+.+++.+||+.||++|||+.+|++.|+...
T Consensus 268 ~~~~~~~~~~~~----~----~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 268 VAVQTAKTNLLD----E----LPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHHHHH----T----TTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHHHHHHhhcc----c----ccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 111111111111 0 0000000000 0122357889999999999999999999999999864
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-34 Score=300.28 Aligned_cols=235 Identities=23% Similarity=0.297 Sum_probs=187.2
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
...+|.+.+.||+|+||.||+++.. +++.||||.++... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 3467889999999999999999954 68999999997543 334568899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC-------------------CccEEcccCcccccCCCCCcc
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE-------------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-------------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
|+++++|.+++.....+++..+..++.|++.||.|||+.+ ..+||+|||+++......
T Consensus 87 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~--- 163 (304)
T 2jam_A 87 LVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI--- 163 (304)
T ss_dssp CCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT---
T ss_pred cCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc---
Confidence 9999999999987778999999999999999999999753 358999999997654321
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ...... +..+. ..
T Consensus 164 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---------~~~~~~----i~~~~----~~ 225 (304)
T 2jam_A 164 -MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE---------SKLFEK----IKEGY----YE 225 (304)
T ss_dssp -THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH---------HHHHHH----HHHCC----CC
T ss_pred -cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---------HHHHHH----HHcCC----CC
Confidence 3345699999999999999999999999999999999999999864311 111111 11111 00
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.........+..+.+++.+||+.||++|||+.+++++
T Consensus 226 -----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 226 -----FESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp -----CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred -----CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0111122334678899999999999999999999975
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=308.10 Aligned_cols=260 Identities=26% Similarity=0.251 Sum_probs=184.5
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEe-----CCeEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE-----GRHRLL 534 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~~~l 534 (736)
....|.+.+.||+|+||.||+|+. +++.||||++............|+..+..++||||+++++.+.. ....++
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 346788899999999999999987 68999999996543333223344444556899999999986643 236789
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC---------C----------------CccEEcccCccc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD---------E----------------FEPKIADFGLAK 589 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~---------~----------------~~~kl~DFGla~ 589 (736)
||||+++|+|.+++.... .++..+..++.||++||.|||+. + ..+||+|||+++
T Consensus 90 v~e~~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~ 168 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM 168 (336)
T ss_dssp EECCCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEecCCCCcHHHHHhhcc-cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecccee
Confidence 999999999999997654 58999999999999999999976 3 378999999998
Q ss_pred ccCCCCC------cceeecccccCcccChhcccC-------CCCccccceechhHHHHHHHhCCCCCCccccCCccchhH
Q 041821 590 LSQRGSN------SSQFSQIRGTKGYMAPEWASN-------LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAE 656 (736)
Q Consensus 590 ~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~ 656 (736)
.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|..|+.............
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~ 248 (336)
T 3g2f_A 169 RLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAF 248 (336)
T ss_dssp ECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTT
T ss_pred ecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhh
Confidence 7654321 112334579999999999986 456789999999999999999987765432221110000
Q ss_pred HH-----HHHHHHHHHHhhhccccccccccCccCC--CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 657 LK-----RFVREVKRKILYEEEAWIEEIVDPRLKG--KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 657 ~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
.. ........... .....+.+.. ......+..+.+|+.+||+.||++|||+.||++.|+++.+.-
T Consensus 249 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 249 QTEVGNHPTFEDMQVLVS-------REKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp HHHHCSSCCHHHHHHHHT-------TSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred hcccCCCchHHHHHhhhc-------ccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 00 00001110000 0111111111 123346778999999999999999999999999999876443
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-34 Score=322.54 Aligned_cols=234 Identities=20% Similarity=0.253 Sum_probs=184.7
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--------------ccHHHHHHHHHHHhcCCCCceeeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--------------QGEEVFWAEVSTIGKIYHMNLVRMWGF 525 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~l~~~ 525 (736)
...|.+.++||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.+|++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 356888999999999999999954 57899999986532 234678899999999999999999999
Q ss_pred EEeCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccC
Q 041821 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFG 586 (736)
Q Consensus 526 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFG 586 (736)
+.+....+||||||++|+|.+++.....+++..+..++.||+.||.|||+.++ .+||+|||
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 194 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFG 194 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCT
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECC
Confidence 99999999999999999999999877789999999999999999999997532 58999999
Q ss_pred cccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHH
Q 041821 587 LAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR 666 (736)
Q Consensus 587 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 666 (736)
+++....... .....||+.|+|||++.+ .++.++|||||||++|||++|..||..... ......+
T Consensus 195 ~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~~i-- 259 (504)
T 3q5i_A 195 LSSFFSKDYK---LRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQND---------QDIIKKV-- 259 (504)
T ss_dssp TCEECCTTSC---BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHH--
T ss_pred CCEEcCCCCc---cccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHH--
Confidence 9987755432 345679999999999874 699999999999999999999999974321 1111111
Q ss_pred HHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 667 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+. . ..+.... ...+..+.+|+.+||+.||.+|||+.|++++
T Consensus 260 --~~~~---~--~~~~~~~----~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 260 --EKGK---Y--YFDFNDW----KNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp --HHCC---C--CCCHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --HcCC---C--CCCcccc----CCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1111 0 0000000 1123578899999999999999999999976
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-35 Score=307.49 Aligned_cols=242 Identities=22% Similarity=0.261 Sum_probs=177.4
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC----e
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR----H 531 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~ 531 (736)
..+|.+.+.||+|+||.||+++. .+++.||||+++... .....+.+|+.++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35688999999999999999994 568999999996532 22356889999999999999999999987654 3
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.++||||+++++|.+++.....+++.++..++.|++.||.|||+.+ ..+||+|||+++......
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 170 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-------
T ss_pred cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccc
Confidence 4999999999999999987778999999999999999999999763 368999999998765432
Q ss_pred Cc-ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 596 NS-SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 596 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.. .......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ...... ... .
T Consensus 171 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~---------~~~~~~---~~~-~-- 235 (311)
T 3ork_A 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV---------SVAYQH---VRE-D-- 235 (311)
T ss_dssp -----------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH---------HHHHHH---HHC-C--
T ss_pred cccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH---------HHHHHH---hcC-C--
Confidence 22 1233467999999999999999999999999999999999999999643210 000000 000 0
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH-HHHhcc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVV-QSLLEC 724 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl-~~L~~~ 724 (736)
...+.. .....+..+.+++.+||+.||++||++.+++ +.|...
T Consensus 236 ----~~~~~~---~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 236 ----PIPPSA---RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp ----CCCHHH---HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ----CCCccc---ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 000000 0011245788999999999999999666555 445443
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=298.32 Aligned_cols=235 Identities=24% Similarity=0.315 Sum_probs=181.6
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeC-CeEEEEEec
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG-RHRLLIYEY 538 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e~ 538 (736)
....|++.+.||+|+||.||+++. .++.||||.++... ..+.+.+|+.++++++||||+++++++.+. +..++||||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred ChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 346788999999999999999987 48899999997543 456789999999999999999999997654 478999999
Q ss_pred CCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 539 VEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 539 ~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
+++++|.+++.... .+++..+..++.|+++||.|||+.+ ..+||+|||+++..... .
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-----~ 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-----Q 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-------------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccccc-----c
Confidence 99999999997654 3899999999999999999999763 36899999999865432 2
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .... .+..
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---------~~~~----~~~~--------- 229 (278)
T 1byg_A 172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---------DVVP----RVEK--------- 229 (278)
T ss_dssp ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---------GHHH----HHTT---------
T ss_pred cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---------HHHH----HHhc---------
Confidence 23457889999999998899999999999999999998 99998643211 0111 1111
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
......+...+..+.+++.+||+.||++|||+.++++.|+++..
T Consensus 230 ---~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 230 ---GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp ---TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 01111223345678899999999999999999999999998854
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=311.41 Aligned_cols=228 Identities=23% Similarity=0.245 Sum_probs=175.7
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHH-HhcCCCCceeeEEEEEEeCCeEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVST-IGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
..+|++.+.||+|+||.||+++.. +++.||||++++.. ...+.+.+|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357889999999999999999954 48899999996543 223456677776 577899999999999999999999
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
||||+++|+|.+++.....+++..+..++.||+.||.|||+.+ ..+||+|||+++.......
T Consensus 117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~-- 194 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS-- 194 (373)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC--
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCC--
Confidence 9999999999999988778999999999999999999999763 3789999999986433222
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..... .+....
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~---------~~~~~----~i~~~~------ 255 (373)
T 2r5t_A 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT---------AEMYD----NILNKP------ 255 (373)
T ss_dssp CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH---------HHHHH----HHHHSC------
T ss_pred ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH---------HHHHH----HHHhcc------
Confidence 24557899999999999999999999999999999999999999964321 11111 111110
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDS 716 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 716 (736)
+ ..+......+.+|+.+||+.||++||++.+
T Consensus 256 -----~--~~~~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 256 -----L--QLKPNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp -----C--CCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred -----c--CCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 0 112223457889999999999999999853
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=318.93 Aligned_cols=235 Identities=21% Similarity=0.225 Sum_probs=189.9
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
..+|.+.+.||+|+||.||+|+.. +++.||||++.+. ......+.+|+.+|++++|||||++++++.+.+..+||
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 456788899999999999999954 6899999999653 23456688999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCc
Q 041821 536 YEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~ 597 (736)
|||+++|+|.+++.... .+++..+..++.||+.||.|||+. +..+||+|||+++.......
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~- 341 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT- 341 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC-
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCcc-
Confidence 99999999999997654 499999999999999999999975 34789999999987754432
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||........ .. .+. ..+...
T Consensus 342 --~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~--~~---~i~----~~i~~~------ 404 (576)
T 2acx_A 342 --IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--RE---EVE----RLVKEV------ 404 (576)
T ss_dssp --EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC--HH---HHH----HHHHHC------
T ss_pred --ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh--HH---HHH----HHhhcc------
Confidence 3456899999999999998999999999999999999999999975432111 11 111 111110
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
. ..++...+..+.+|+.+||+.||++|| ++.||++|
T Consensus 405 ---~----~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 405 ---P----EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ---C----CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ---c----ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 0 112223346788999999999999999 78999875
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-34 Score=300.25 Aligned_cols=246 Identities=19% Similarity=0.223 Sum_probs=182.1
Q ss_pred hhhhcc-cccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEe
Q 041821 462 STKSFK-EELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 462 ~~~~~~-~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 537 (736)
..|.+. +.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.++.++ +||||+++++++.+++..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 456664 6799999999999994 468999999996543 4567789999999885 79999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCcccccCCCCCc-
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNS- 597 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~~~~~~~~~- 597 (736)
|+++++|.+++.....+++..+..++.||+.||.|||+.++ .+||+|||+++........
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 171 (316)
T 2ac3_A 92 KMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171 (316)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------
T ss_pred cCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc
Confidence 99999999999887789999999999999999999997643 2899999999865432211
Q ss_pred ----ceeecccccCcccChhcccC-----CCCccccceechhHHHHHHHhCCCCCCccccCCccchh--HHHHHHHHHHH
Q 041821 598 ----SQFSQIRGTKGYMAPEWASN-----LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEA--ELKRFVREVKR 666 (736)
Q Consensus 598 ----~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~--~~~~~~~~~~~ 666 (736)
.......||+.|+|||++.. ..++.++|||||||++|||++|+.||............ ...........
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (316)
T 2ac3_A 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE 251 (316)
T ss_dssp ----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHH
T ss_pred cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHH
Confidence 11234569999999999875 45889999999999999999999999754332210000 00000111111
Q ss_pred HHhhhccccccccccCccCCCCCH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 667 KILYEEEAWIEEIVDPRLKGKFNT----NQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 667 ~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+..+. . ..+. ..+..+.+|+.+||+.||++|||+.|++++
T Consensus 252 ~i~~~~-----------~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 252 SIQEGK-----------Y--EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHCC-----------C--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhccC-----------c--ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111111 0 1111 124578899999999999999999999986
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=320.62 Aligned_cols=234 Identities=19% Similarity=0.254 Sum_probs=184.2
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
...|.+.+.||+|+||.||+|+.. ++..||||++... ......+.+|+.+|+.++||||+++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467889999999999999999954 5889999999653 233567889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC-------------------CccEEcccCcccccCCCCCc
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE-------------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-------------------~~~kl~DFGla~~~~~~~~~ 597 (736)
|||++|+|.+++.....+++..+..++.||+.||.|||+.+ ..+||+|||+++.......
T Consensus 116 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~- 194 (494)
T 3lij_A 116 ECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK- 194 (494)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC-
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc-
Confidence 99999999999987778999999999999999999999753 2489999999987754332
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
.....||+.|+|||++. ..++.++|||||||++|||++|..||..... ..... .+..+. .
T Consensus 195 --~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~----~i~~~~----~ 254 (494)
T 3lij_A 195 --MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD---------QEILR----KVEKGK----Y 254 (494)
T ss_dssp --BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHH----HHHHTC----C
T ss_pred --ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHH----HHHhCC----C
Confidence 34567999999999986 4699999999999999999999999974321 11111 111111 0
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.. +.... ...+..+.+++.+||+.||++|||+.++++|
T Consensus 255 ~~-~~~~~----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 255 TF-DSPEW----KNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp CC-CSGGG----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CC-Cchhc----ccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 00 01001 1224578899999999999999999999875
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=316.14 Aligned_cols=238 Identities=14% Similarity=0.071 Sum_probs=185.0
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
....|++.+.||+|+||.||+++.. +++.||||++++.. ...+.+.+|..++..++||||+++++++.+.+..+|
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 138 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL 138 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 3567888899999999999999964 68999999996532 222347889999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCc
Q 041821 535 IYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~ 597 (736)
||||+++|+|.+++.+. ..+++..+..++.||+.||.|||+. +..+||+|||+++........
T Consensus 139 VmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~ 218 (412)
T 2vd5_A 139 VMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV 218 (412)
T ss_dssp EECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE
T ss_pred EEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCcc
Confidence 99999999999999764 3799999999999999999999975 347899999999876554321
Q ss_pred ceeecccccCcccChhccc-------CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhh
Q 041821 598 SQFSQIRGTKGYMAPEWAS-------NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILY 670 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (736)
.....+||+.|||||++. ...++.++|||||||++|||++|+.||..... ......+. .
T Consensus 219 -~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~~~~~~i~--------~ 284 (412)
T 2vd5_A 219 -RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST-----AETYGKIV--------H 284 (412)
T ss_dssp -ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHH--------T
T ss_pred -ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH-----HHHHHHHH--------h
Confidence 233467999999999987 45689999999999999999999999974321 11111111 0
Q ss_pred hccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 041821 671 EEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKR---PTMDSVVQS 720 (736)
Q Consensus 671 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~ 720 (736)
.. ....-+. .+...+..+.+|+.+||. +|++| |+++||++|
T Consensus 285 ~~----~~~~~p~----~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 285 YK----EHLSLPL----VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HH----HHCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred cc----cCcCCCc----cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 00 0000011 112234578899999999 99998 599999876
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-34 Score=296.44 Aligned_cols=230 Identities=23% Similarity=0.333 Sum_probs=181.2
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEe----CCeEEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE----GRHRLL 534 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 534 (736)
.|.+.+.||+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 467778999999999999995 457899999986532 334678899999999999999999999876 456899
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC--C-----------------ccEEcccCcccccCCCC
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE--F-----------------EPKIADFGLAKLSQRGS 595 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~--~-----------------~~kl~DFGla~~~~~~~ 595 (736)
||||+++++|.+++.....+++..+..++.||+.||.|||+.+ + .+||+|||++.......
T Consensus 107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 186 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 186 (290)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred EEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccc
Confidence 9999999999999988778999999999999999999999865 3 68999999997654432
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
.....||+.|+|||++.+ .++.++||||||+++|||++|+.||...... .... .....+
T Consensus 187 ----~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--------~~~~----~~~~~~---- 245 (290)
T 1t4h_A 187 ----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA--------AQIY----RRVTSG---- 245 (290)
T ss_dssp ----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH--------HHHH----HHHTTT----
T ss_pred ----cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH--------HHHH----HHHhcc----
Confidence 334569999999998874 5899999999999999999999999643211 1111 111111
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...... +...+..+.+++.+||+.||++|||+.+|+++
T Consensus 246 ---~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 246 ---VKPASF----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ---CCCGGG----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ---CCcccc----CCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 000111 11122468899999999999999999999975
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-34 Score=297.73 Aligned_cols=231 Identities=22% Similarity=0.256 Sum_probs=188.2
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
....|.+.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 3467888999999999999999954 5789999998643 2334678999999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~ 598 (736)
||||+++++|.+++.....+++..+..++.|+++||.|||+. +..+||+|||++.......
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 168 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR--- 168 (284)
T ss_dssp EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC---
T ss_pred EEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccc---
Confidence 999999999999998777899999999999999999999975 3378999999997654322
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....|++.|+|||++.+..++.++||||||+++|||++|+.||..... . .. ...+...
T Consensus 169 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~---~~----~~~~~~~------- 227 (284)
T 2vgo_A 169 -RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH------T---ET----HRRIVNV------- 227 (284)
T ss_dssp -BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------H---HH----HHHHHTT-------
T ss_pred -cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH------h---HH----HHHHhcc-------
Confidence 2345689999999999999999999999999999999999999864311 0 00 1111110
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+. ..+...+..+.+++.+||+.||++|||+.+++++
T Consensus 228 --~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 228 --DL----KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp --CC----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred --cc----CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 01 1122234578899999999999999999999875
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=304.91 Aligned_cols=183 Identities=24% Similarity=0.244 Sum_probs=160.6
Q ss_pred HHHHHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCC-----CCceeeEEEEEEeCC
Q 041821 457 AELKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-----HMNLVRMWGFCSEGR 530 (736)
Q Consensus 457 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~~~~~~~~ 530 (736)
.++....|.+.++||+|+||.||+|+. .+++.||||+++......+.+..|+.+++.++ ||||+++++++...+
T Consensus 30 g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~ 109 (360)
T 3llt_A 30 GMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD 109 (360)
T ss_dssp TCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT
T ss_pred ceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC
Confidence 344567889999999999999999995 56889999999876666677888999999986 999999999999999
Q ss_pred eEEEEEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcC--------------------------------
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHD-------------------------------- 576 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~-------------------------------- 576 (736)
..++||||+ +++|.+++.... .+++..+..++.||+.||+|||+.
T Consensus 110 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~ 188 (360)
T 3llt_A 110 HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188 (360)
T ss_dssp EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTC
T ss_pred eeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccccc
Confidence 999999999 899999997654 599999999999999999999964
Q ss_pred ---------CCccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCc
Q 041821 577 ---------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNW 645 (736)
Q Consensus 577 ---------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~ 645 (736)
+..+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 189 ~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 189 KKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp CEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 235799999999865432 2345789999999999999999999999999999999999999974
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=299.83 Aligned_cols=239 Identities=20% Similarity=0.276 Sum_probs=187.7
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEe--CCeEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE--GRHRLLI 535 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv 535 (736)
..|++.+.||+|+||.||+++.. +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+ ....++|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 56888999999999999999954 68999999996432 344678999999999999999999998864 5688999
Q ss_pred EecCCCCCHhhhcccC----CCCCHHHHHHHHHHHHHHhhhhhcCC-----C----------------ccEEcccCcccc
Q 041821 536 YEYVEKQSLDKHLFSS----YFLGWKERFKVALGTAKGLAYLHHDE-----F----------------EPKIADFGLAKL 590 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~i~~gL~yLH~~~-----~----------------~~kl~DFGla~~ 590 (736)
|||+++++|.+++... ..+++..+..++.|++.||.|||+.+ + .+||+|||+++.
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~ 165 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165 (279)
T ss_dssp EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHH
T ss_pred EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhee
Confidence 9999999999998653 35999999999999999999999754 2 689999999987
Q ss_pred cCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhh
Q 041821 591 SQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILY 670 (736)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (736)
...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..... .... ..+..
T Consensus 166 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---------~~~~----~~i~~ 230 (279)
T 2w5a_A 166 LNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---------KELA----GKIRE 230 (279)
T ss_dssp C---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHH----HHHHH
T ss_pred eccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH---------HHHH----HHHhh
Confidence 654321 12345789999999999998999999999999999999999999874311 1111 11111
Q ss_pred hccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 671 EEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 671 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
+. . + ..+...+..+.+++.+||+.||++|||+.||++++......
T Consensus 231 ~~---~-----~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 231 GK---F-----R----RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp TC---C-----C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred cc---c-----c----cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence 11 1 0 11223346788999999999999999999999998766543
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=303.72 Aligned_cols=247 Identities=23% Similarity=0.299 Sum_probs=187.9
Q ss_pred HHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc-cccHHHHHHHHHHHhcCCCCceeeEEEEEEe----CCeEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL-HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE----GRHRL 533 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 533 (736)
...+|.+.+.||+|+||.||+++. .+++.||||++... ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 346788999999999999999995 56899999998543 3445678999999999999999999999873 34779
Q ss_pred EEEecCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCC
Q 041821 534 LIYEYVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQR 593 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~ 593 (736)
+||||+++|+|.+++.. ...+++.++..++.||++||.|||+. +..+||+|||+++....
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 186 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence 99999999999998875 45799999999999999999999975 33789999999876532
Q ss_pred CCCcc-------eeecccccCcccChhcccCCC---CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHH
Q 041821 594 GSNSS-------QFSQIRGTKGYMAPEWASNLP---ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVRE 663 (736)
Q Consensus 594 ~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 663 (736)
..... ......||+.|+|||++.... ++.++||||||+++|||++|+.||......... ....
T Consensus 187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-------~~~~ 259 (317)
T 2buj_A 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS-------VALA 259 (317)
T ss_dssp EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC-------HHHH
T ss_pred ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch-------hhHH
Confidence 11110 012345799999999987654 688999999999999999999998643221110 0000
Q ss_pred HHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccc
Q 041821 664 VKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729 (736)
Q Consensus 664 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (736)
. .. ..........+..+.+++.+||+.||.+|||+.+|+++|+.+.....
T Consensus 260 ~------------~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~ 309 (317)
T 2buj_A 260 V------------QN----QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAP 309 (317)
T ss_dssp H------------HC----C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred h------------hc----cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCC
Confidence 0 00 00111112234578899999999999999999999999999865443
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=306.85 Aligned_cols=257 Identities=22% Similarity=0.285 Sum_probs=193.3
Q ss_pred HHHhhhhcccccCeeceeEEEEeee-----CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC--
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVL-----ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR-- 530 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 530 (736)
+....|.+.+.||+|+||.||+++. .+++.||||++.... ...+.+.+|+.++++++||||+++++++...+
T Consensus 38 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred cCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 4456788999999999999999983 358899999997643 34567899999999999999999999987644
Q ss_pred eEEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCC
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQR 593 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~ 593 (736)
..++||||+++++|.+++.... .+++..+..++.|+++||.|||+.+ ..+||+|||+++....
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred ceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 6799999999999999997654 6999999999999999999999763 3689999999987755
Q ss_pred CCCcce-eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCc---cchhHHHHHHHHHHHHHh
Q 041821 594 GSNSSQ-FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGE---GQEAELKRFVREVKRKIL 669 (736)
Q Consensus 594 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 669 (736)
...... .....++..|+|||++.+..++.++||||||+++|||++|..|+........ ..............
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 273 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---- 273 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHH----
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHH----
Confidence 433211 2234577889999999988899999999999999999999988753210000 00000000000111
Q ss_pred hhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 670 YEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 670 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
+.+........+...+..+.+++.+||+.||++|||+.+|++.|+++.++
T Consensus 274 --------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 274 --------ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp --------HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------HHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11111111122333456789999999999999999999999999988653
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=308.94 Aligned_cols=251 Identities=16% Similarity=0.174 Sum_probs=191.6
Q ss_pred HhhhhcccccCeeceeEEEEeeeCC---------CcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceee----------
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLAD---------GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVR---------- 521 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 521 (736)
...|.+.+.||+|+||.||+|+... ++.||||.+... +.+.+|+.++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 4578899999999999999999653 789999998654 35778999999999999988
Q ss_pred -----EEEEEEe-CCeEEEEEecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCCC---------------
Q 041821 522 -----MWGFCSE-GRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDEF--------------- 578 (736)
Q Consensus 522 -----l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~~--------------- 578 (736)
+++++.. +...+|||||+ +++|.+++... ..+++.++..++.||+.||.|||+.++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~ 195 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPE 195 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETT
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCC
Confidence 6778776 78889999999 99999999876 579999999999999999999997632
Q ss_pred ---ccEEcccCcccccCCCCCcc-----eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCC
Q 041821 579 ---EPKIADFGLAKLSQRGSNSS-----QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDG 650 (736)
Q Consensus 579 ---~~kl~DFGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~ 650 (736)
.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 196 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 275 (352)
T 2jii_A 196 DQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT 275 (352)
T ss_dssp EEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH
Confidence 68999999998765432111 1234579999999999999999999999999999999999999997442111
Q ss_pred ccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccccc
Q 041821 651 EGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEI 730 (736)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 730 (736)
...... ....... ...+.+.... ....+..+.+++.+||+.||++|||+.+|++.|+++.++...
T Consensus 276 ----~~~~~~----~~~~~~~----~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 276 ----EDIMKQ----KQKFVDK----PGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp ----HHHHHH----HHHHHHS----CCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred ----HHHHHH----HHhccCC----hhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 111111 1111111 1111111100 011235788999999999999999999999999998766554
Q ss_pred c
Q 041821 731 H 731 (736)
Q Consensus 731 ~ 731 (736)
.
T Consensus 341 ~ 341 (352)
T 2jii_A 341 S 341 (352)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=301.03 Aligned_cols=243 Identities=18% Similarity=0.231 Sum_probs=188.7
Q ss_pred cccHHHHHHhhhhcc-cccCeeceeEEEEeeeC-CCcEEEEEEeCcc---cccHHHHHHHHHHHhcCC-CCceeeEEEEE
Q 041821 453 RFSYAELKKSTKSFK-EELGRGGSGAVYKGVLA-DGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIY-HMNLVRMWGFC 526 (736)
Q Consensus 453 ~~~~~~i~~~~~~~~-~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 526 (736)
.|...+.....|.+. +.||+|+||.||+|+.. +++.||||+++.. ......+.+|+.++.++. ||||+++++++
T Consensus 19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~ 98 (327)
T 3lm5_A 19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY 98 (327)
T ss_dssp CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence 344556666777777 78999999999999954 5899999999653 234677899999999994 69999999999
Q ss_pred EeCCeEEEEEecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC-------------------CccEEccc
Q 041821 527 SEGRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE-------------------FEPKIADF 585 (736)
Q Consensus 527 ~~~~~~~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~-------------------~~~kl~DF 585 (736)
.+.+..++||||+++|+|.+++... ..+++.++..++.|++.||.|||+.+ ..+||+||
T Consensus 99 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Df 178 (327)
T 3lm5_A 99 ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDF 178 (327)
T ss_dssp ECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred EeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeC
Confidence 9999999999999999999998654 47999999999999999999999652 46899999
Q ss_pred CcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH
Q 041821 586 GLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK 665 (736)
Q Consensus 586 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (736)
|+++....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ........
T Consensus 179 g~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~~i~ 246 (327)
T 3lm5_A 179 GMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN---------QETYLNIS 246 (327)
T ss_dssp GGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHH
T ss_pred ccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---------hHHHHHHH
Confidence 99987654322 3446799999999999999999999999999999999999999964321 00111110
Q ss_pred HHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 666 RKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 666 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.. ...............+.+++.+||+.||++|||+.+++++
T Consensus 247 ----~~---------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 247 ----QV---------NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp ----HT---------CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ----hc---------ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 00 0011111122334678899999999999999999999986
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-34 Score=301.89 Aligned_cols=250 Identities=21% Similarity=0.292 Sum_probs=184.4
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.+|.+.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 56888999999999999999964 48999999985433 234567899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
|+++++|..++.....+++..+..++.||+.||.|||+.+ ..+||+|||+++....... ...
T Consensus 105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~ 182 (331)
T 4aaa_A 105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYD 182 (331)
T ss_dssp CCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-------------
T ss_pred cCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc--ccC
Confidence 9999999998877778999999999999999999999763 3789999999986654322 134
Q ss_pred cccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHH-------HHHHHhhhcc
Q 041821 602 QIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVRE-------VKRKILYEEE 673 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 673 (736)
...||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ......... ....... .
T Consensus 183 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~ 255 (331)
T 4aaa_A 183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI-----DQLYHIMMCLGNLIPRHQELFNK--N 255 (331)
T ss_dssp -CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHHHCSCCHHHHHHHHH--C
T ss_pred CCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH-----HHHHHHHHHhCCCChhhhhHhhh--c
Confidence 45789999999999875 6899999999999999999999999743211 111111110 0000000 0
Q ss_pred ccccccccCccCCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFN-----TNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
........+......+ +..+..+.+|+.+||+.||++|||+.|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0011111122211111 1235678999999999999999999999875
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-34 Score=299.76 Aligned_cols=238 Identities=20% Similarity=0.300 Sum_probs=182.3
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCC--CCceeeEEEEEEeCCeEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIY--HMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~l 534 (736)
....|.+.+.||+|+||.||+++..+++.||||++.... ...+.+.+|+.++++++ ||||+++++++.+.+..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 345688899999999999999998889999999995432 34467899999999997 5999999999999999999
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC---------------ccEEcccCcccccCCCCCcce
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF---------------EPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------~~kl~DFGla~~~~~~~~~~~ 599 (736)
||| +.+++|.+++.....+++..+..++.|+++||.|||+.++ .+||+|||+++..........
T Consensus 106 v~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~~~~~~~~~~~ 184 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVV 184 (313)
T ss_dssp EEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCC---------
T ss_pred EEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEECCeEEEeeccccccccCcccccc
Confidence 999 5689999999888889999999999999999999998743 589999999987655433322
Q ss_pred eecccccCcccChhcccC-----------CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHH
Q 041821 600 FSQIRGTKGYMAPEWASN-----------LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKI 668 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (736)
.....||+.|+|||++.+ ..++.++||||||+++|||++|+.||...... .. .
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-------~~----~----- 248 (313)
T 3cek_A 185 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-------IS----K----- 248 (313)
T ss_dssp -----CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HH----H-----
T ss_pred ccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-------HH----H-----
Confidence 345679999999999875 46889999999999999999999998633210 00 0
Q ss_pred hhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 669 LYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 669 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
+...+++......+......+.+++.+||+.||++|||+.|++++-
T Consensus 249 -------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 249 -------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp -------HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred -------HHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 1111111111122222245788999999999999999999999864
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=307.36 Aligned_cols=234 Identities=18% Similarity=0.155 Sum_probs=173.6
Q ss_pred hhhcc-cccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHh-cCCCCceeeEEEEEEe----CCeEEEE
Q 041821 463 TKSFK-EELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIG-KIYHMNLVRMWGFCSE----GRHRLLI 535 (736)
Q Consensus 463 ~~~~~-~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~----~~~~~lv 535 (736)
.|.+. +.||+|+||.||+++.. +++.||||+++.. ..+.+|+.++. ..+||||+++++++.. ....+||
T Consensus 62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv 137 (400)
T 1nxk_A 62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 137 (400)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEE
Confidence 45555 68999999999999954 5889999999542 34667888874 4589999999999876 5678999
Q ss_pred EecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcC-------------------CCccEEcccCcccccCCC
Q 041821 536 YEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHD-------------------EFEPKIADFGLAKLSQRG 594 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~-------------------~~~~kl~DFGla~~~~~~ 594 (736)
||||++|+|.+++.... .+++.++..|+.||+.||.|||+. +..+||+|||+++.....
T Consensus 138 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 138 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp EECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred EEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 99999999999998754 599999999999999999999964 346899999999876533
Q ss_pred CCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
. .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.......... . ... .+..+.
T Consensus 218 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~--~---~~~----~i~~~~-- 283 (400)
T 1nxk_A 218 N---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--G---MKT----RIRMGQ-- 283 (400)
T ss_dssp ------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC--S---HHH----HHHHTC--
T ss_pred C---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH--H---HHH----HHHcCc--
Confidence 2 2345679999999999999999999999999999999999999997543221100 0 001 111110
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
. .. + .......+..+.+|+.+||+.||++|||+.||+++-
T Consensus 284 -~-~~--~---~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 284 -Y-EF--P---NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp -C-CC--C---TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred -c-cC--C---CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 0 00 0 001112345788999999999999999999999863
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=310.92 Aligned_cols=248 Identities=19% Similarity=0.212 Sum_probs=176.8
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeC------Ce
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG------RH 531 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 531 (736)
.+|.+.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|+.+|+.++||||+++++++... ..
T Consensus 62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 5688899999999999999984 45899999999653 23346788999999999999999999999654 46
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.+|||||+++ +|.+.+.. .+++..+..++.||+.||+|||+.+ ..+||+|||+++......
T Consensus 142 ~~lv~E~~~~-~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 218 (464)
T 3ttj_A 142 VYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 218 (464)
T ss_dssp EEEEEECCSE-EHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CC
T ss_pred EEEEEeCCCC-CHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc
Confidence 7999999975 46666643 4899999999999999999999763 378999999998765432
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH----------
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK---------- 665 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---------- 665 (736)
. ....+||+.|+|||++.+..|+.++|||||||++|||++|+.||..... ...+..+.....
T Consensus 219 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~-----~~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 219 M---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-----IDQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp C---C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHHHCSCCHHHHTTS
T ss_pred c---cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHhcCCCCHHHHHHc
Confidence 2 4557899999999999999999999999999999999999999974321 111111111100
Q ss_pred ----HHHhhhccc----cccccccCccCCC---CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 666 ----RKILYEEEA----WIEEIVDPRLKGK---FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 666 ----~~~~~~~~~----~~~~~~d~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......... .+.......+... ........+.+|+.+||+.||++|||++|+++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000 0000000000000 011225678999999999999999999999987
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-33 Score=291.99 Aligned_cols=250 Identities=17% Similarity=0.168 Sum_probs=191.3
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEE-EeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFC-SEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e~~ 539 (736)
..|.+.+.||+|+||.||+|+. .+++.||||++..... .+.+.+|+.+++.++|++++..+..+ .+++..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 5678899999999999999995 5689999999854332 23578999999999988876666655 6678889999999
Q ss_pred CCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcC-------------------CCccEEcccCcccccCCCCCcc-
Q 041821 540 EKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHD-------------------EFEPKIADFGLAKLSQRGSNSS- 598 (736)
Q Consensus 540 ~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~-------------------~~~~kl~DFGla~~~~~~~~~~- 598 (736)
+++|.+++.. ...+++..+..++.||+.||.|||++ +..+||+|||+++.........
T Consensus 88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (296)
T 3uzp_A 88 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 166 (296)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB
T ss_pred -CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccc
Confidence 8999999974 44799999999999999999999965 3368999999998776543311
Q ss_pred ----eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 599 ----QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 599 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .......... ...
T Consensus 167 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~---~~~---- 237 (296)
T 3uzp_A 167 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR--QKYERISEKK---MST---- 237 (296)
T ss_dssp CCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS--SHHHHHHHHH---HHS----
T ss_pred cccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh--hhhhhhcccc---cCC----
Confidence 124467999999999999999999999999999999999999999754322211 1111111110 000
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccccc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEIH 731 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 731 (736)
....+. . ..+..+.+++.+||+.||++|||+.+|++.|+++..+....
T Consensus 238 -~~~~~~----~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 285 (296)
T 3uzp_A 238 -PIEVLC----K----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp -CHHHHT----T----TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred -chHHHH----h----hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCc
Confidence 000000 1 12356889999999999999999999999999987665543
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=293.31 Aligned_cols=226 Identities=21% Similarity=0.258 Sum_probs=182.6
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc---cccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL---HQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 535 (736)
...|.+.+.||+|+||.||+|+.. +++.||||++... ......+.+|+..+.++ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467889999999999999999964 6899999998643 33456788999999999 899999999999999999999
Q ss_pred EecCCCCCHhhhcccC----CCCCHHHHHHHHHHHHHHhhhhhcCCC---------------------------------
Q 041821 536 YEYVEKQSLDKHLFSS----YFLGWKERFKVALGTAKGLAYLHHDEF--------------------------------- 578 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~i~~gL~yLH~~~~--------------------------------- 578 (736)
|||+++++|.+++... ..+++..+..++.||++||.|||+.++
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN 169 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence 9999999999999764 568999999999999999999996522
Q ss_pred --ccEEcccCcccccCCCCCcceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchh
Q 041821 579 --EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEA 655 (736)
Q Consensus 579 --~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~ 655 (736)
.+||+|||++....... ...||+.|+|||++.+. .++.++|||||||++|||++|.+++....
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------- 235 (289)
T 1x8b_A 170 KVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-------- 235 (289)
T ss_dssp CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--------
T ss_pred ceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--------
Confidence 47999999998765432 23589999999999876 67789999999999999999987764210
Q ss_pred HHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 656 ELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. . ..+..+. .+. .+...+..+.+++.+||+.||++|||+.+++++
T Consensus 236 ~----~----~~~~~~~--------~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 236 Q----W----HEIRQGR--------LPR----IPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp H----H----HHHHTTC--------CCC----CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred H----H----HHHHcCC--------CCC----CCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 0 0 0111110 111 122234578899999999999999999999876
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-34 Score=304.79 Aligned_cols=237 Identities=22% Similarity=0.195 Sum_probs=186.6
Q ss_pred hhhhcccccCeeceeEEEEeee----CCCcEEEEEEeCccc-----ccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCe
Q 041821 462 STKSFKEELGRGGSGAVYKGVL----ADGRAVAVKRLGDLH-----QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 531 (736)
..|.+.+.||+|+||.||+++. .+++.||||+++... ...+.+.+|+++|+++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5788999999999999999986 368999999997532 2335577899999999 69999999999999999
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.+|||||+++++|.+++.....+++..+..++.||++||.|||+.+ ..+||+|||+++......
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 213 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE 213 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGG
T ss_pred EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCC
Confidence 9999999999999999987778999999999999999999999763 378999999998664332
Q ss_pred CcceeecccccCcccChhcccC--CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASN--LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ...+.... ...
T Consensus 214 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-----~~~~~~~~----~~~-- 281 (355)
T 1vzo_A 214 TE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-----QAEISRRI----LKS-- 281 (355)
T ss_dssp GG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-----HHHHHHHH----HHC--
T ss_pred CC-cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-----HHHHHHHH----hcc--
Confidence 22 2345679999999999985 3478999999999999999999999974332211 11111111 100
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQSL 721 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 721 (736)
. ...+...+..+.+|+.+||+.||++|| ++.|++++.
T Consensus 282 -------~----~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 282 -------E----PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -------C----CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -------C----CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 0 112223345788999999999999999 999999875
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=307.90 Aligned_cols=253 Identities=20% Similarity=0.208 Sum_probs=189.1
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
++...+|.+.+.||+|+||.||+++.. +++.||+|++... ....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 108 (360)
T 3eqc_A 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 108 (360)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEE
Confidence 445677889999999999999999954 5899999999654 2334678999999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEcccCcccccCCCCCc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~~~~~~~~~ 597 (736)
||||+++++|.+++.....+++..+..++.|++.||.|||+. +..+||+|||+++.....
T Consensus 109 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 185 (360)
T 3eqc_A 109 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 185 (360)
T ss_dssp EECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---
T ss_pred EEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc---
Confidence 999999999999998877899999999999999999999963 336899999999755322
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHH---------HHHH-
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVRE---------VKRK- 667 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---------~~~~- 667 (736)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....... ....
T Consensus 186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 258 (360)
T 3eqc_A 186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE------LELMFGCQVEGDAAETPPRPR 258 (360)
T ss_dssp -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHH------HHHHHC---------------
T ss_pred -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHhcccccccCCCCCCCcc
Confidence 1334579999999999999999999999999999999999999997432110 0000000 0000
Q ss_pred --------Hhhh--c----cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 668 --------ILYE--E----EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 668 --------~~~~--~----~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.... . ......+.............+..+.+|+.+||+.||++|||+.|+++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 259 TPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ---------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000 0 000000111111111112234578899999999999999999999975
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-34 Score=302.83 Aligned_cols=232 Identities=22% Similarity=0.246 Sum_probs=188.0
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
..+|.+.+.||+|+||.||+++.. +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 356788899999999999999964 47899999986432 3446788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcce
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|||+++++|.+++.....+++.++..++.||++||.|||+. +..+||+|||+++........
T Consensus 120 ~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-- 197 (335)
T 2owb_A 120 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-- 197 (335)
T ss_dssp ECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCC--
T ss_pred EecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCccc--
Confidence 99999999999998777899999999999999999999975 337899999999876543222
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ...... +....
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---------~~~~~~----~~~~~------- 257 (335)
T 2owb_A 198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLR----IKKNE------- 257 (335)
T ss_dssp BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH---------HHHHHH----HHHTC-------
T ss_pred ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH---------HHHHHH----HhcCC-------
Confidence 3446799999999999999999999999999999999999999864321 011111 11110
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ..+......+.+++.+||+.||++|||+.|++++
T Consensus 258 --~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 258 --Y----SIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp --C----CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred --C----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 1111223568889999999999999999999975
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=297.79 Aligned_cols=237 Identities=19% Similarity=0.229 Sum_probs=182.6
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---------ccHHHHHHHHHHHhcCCCCceeeEEEEEEe
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---------QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE 528 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 528 (736)
.....|.+.+.||+|+||.||+|+.. +++.||||.+.... .....+.+|+.+|++++||||+++++++..
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 86 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 86 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence 34578999999999999999999954 58899999986432 112347899999999999999999999877
Q ss_pred CCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCccc
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAK 589 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~ 589 (736)
+. .++||||+++++|.+++.....+++..+..++.||+.||.|||+.++ .+||+|||+++
T Consensus 87 ~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 87 ED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp SS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred Cc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence 65 89999999999999999888889999999999999999999997532 38999999998
Q ss_pred ccCCCCCcceeecccccCcccChhccc---CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHH
Q 041821 590 LSQRGSNSSQFSQIRGTKGYMAPEWAS---NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR 666 (736)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 666 (736)
...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||........ .. ..+
T Consensus 166 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~---~~~-- 232 (322)
T 2ycf_A 166 ILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-----LK---DQI-- 232 (322)
T ss_dssp ECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-----HH---HHH--
T ss_pred eccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-----HH---HHH--
Confidence 764422 133467999999999974 56789999999999999999999999974332211 00 001
Q ss_pred HHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 667 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+..... +... ...+..+.+++.+||+.||++|||+.+++++
T Consensus 233 --~~~~~~~~-----~~~~----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 233 --TSGKYNFI-----PEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp --HHTCCCCC-----HHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --HhCccccC-----chhh----hhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 11100000 0000 1124578899999999999999999999864
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=292.23 Aligned_cols=238 Identities=18% Similarity=0.222 Sum_probs=189.7
Q ss_pred HHHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 457 AELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 457 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
......+|.+.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+.++++++||||+++++++.+.+..
T Consensus 17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 3455678999999999999999999964 6899999998643 23467789999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCcccccCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQR 593 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~~~~~ 593 (736)
++||||+++++|.+++.....+++..+..++.||+.||.|||+.++ .+||+|||+++....
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 9999999999999998777789999999999999999999997632 589999999987654
Q ss_pred CCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
... .....||+.|+|||.+.+. ++.++||||||+++|||++|+.||..... ..... .+..+.
T Consensus 177 ~~~---~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~---------~~~~~----~~~~~~- 238 (287)
T 2wei_A 177 NTK---MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNE---------YDILK----RVETGK- 238 (287)
T ss_dssp CSS---CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHH----HHHHCC-
T ss_pred CCc---cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCH---------HHHHH----HHHcCC-
Confidence 332 3345689999999998764 89999999999999999999999864311 11111 111111
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.. .+... ....+..+.+++.+||+.||++|||+.+++++
T Consensus 239 --~~--~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 239 --YA--FDLPQ----WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp --CC--CCSGG----GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --CC--CCchh----hhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 00 00000 01224578899999999999999999999985
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=296.65 Aligned_cols=232 Identities=23% Similarity=0.291 Sum_probs=187.5
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
..|.+.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|+.++++++||||+++++++.+....++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 4578889999999999999984 46899999999643 34457789999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+++++|.+++.. ..+++..+..++.|++.||.|||+. +..+||+|||++........ ....
T Consensus 102 ~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~ 178 (303)
T 3a7i_A 102 LGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--KRNT 178 (303)
T ss_dssp CTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC--CBCC
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCcccc--ccCc
Confidence 999999999865 4699999999999999999999975 34789999999987654322 1344
Q ss_pred ccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
..||+.|+|||++.+..++.++||||||+++|||++|+.||..... . ...... ... ..+
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~---~~~~~~----~~~--------~~~ 237 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP------M---KVLFLI----PKN--------NPP 237 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------H---HHHHHH----HHS--------CCC
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH------H---HHHHHh----hcC--------CCC
Confidence 5789999999999999999999999999999999999999863211 0 011111 010 111
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
.+. ...+..+.+++.+||+.||++|||+.+|+++.
T Consensus 238 ~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 238 TLE----GNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp CCC----SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred CCc----cccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 111 12235688999999999999999999999864
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-33 Score=289.16 Aligned_cols=231 Identities=20% Similarity=0.252 Sum_probs=179.3
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
..+|.+.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 457888999999999999999965 68999999996432 3346788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcce
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|||+++++|.+++.....+++..+..++.|++.||.|||+. +..+||+|||++........
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--- 166 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--- 166 (276)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC------
T ss_pred EeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcc---
Confidence 99999999999998777899999999999999999999965 33789999999987654322
Q ss_pred eecccccCcccChhcccCCCC-ccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPI-TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
.....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||.... ....... +....
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~---------~~~~~~~----~~~~~------ 227 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH---------VPTLFKK----IRGGV------ 227 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS---------HHHHHHH----HHHCC------
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc---------HHHHHHH----hhcCc------
Confidence 334568999999999988765 689999999999999999999986321 1111111 11110
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ..+......+.+++.+||+.||++|||+.+|+++
T Consensus 228 ---~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 228 ---F----YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ---C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---c----cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 0111223568889999999999999999999986
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=295.27 Aligned_cols=232 Identities=22% Similarity=0.249 Sum_probs=188.1
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
..+|.+.+.||+|+||.||+++.. +++.||+|.+.... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 356788899999999999999965 47899999986432 3346688999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcce
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~ 599 (736)
|||+++++|.+++.....+++.++..++.|+++||.|||+. +..+||+|||+++........
T Consensus 94 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~-- 171 (294)
T 2rku_A 94 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-- 171 (294)
T ss_dssp EECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCC--
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCccc--
Confidence 99999999999998777899999999999999999999975 347899999999876543222
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||..... .... ..+....
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---------~~~~----~~~~~~~------- 231 (294)
T 2rku_A 172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETY----LRIKKNE------- 231 (294)
T ss_dssp BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH---------HHHH----HHHHTTC-------
T ss_pred cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HHHH----HHHhhcc-------
Confidence 3345789999999999998899999999999999999999999864321 0010 1111100
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ..+......+.+++.+||+.||++|||+.+++++
T Consensus 232 --~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 232 --Y----SIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp --C----CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred --C----CCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 1112233578889999999999999999999986
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=306.40 Aligned_cols=186 Identities=24% Similarity=0.347 Sum_probs=145.9
Q ss_pred HHHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCC--e
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGR--H 531 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~ 531 (736)
....+|.+.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|+.+|+++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3456789999999999999999994 46899999998643 233456789999999997 999999999998644 7
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~ 595 (736)
.++|||||+ ++|.+++... .+++..+..++.||++||+|||+. +..+||+|||+|+.+....
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN-ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred EEEEecccC-cCHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 899999998 6999988764 699999999999999999999975 3378999999998664311
Q ss_pred -------------------CcceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCcc
Q 041821 596 -------------------NSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWV 646 (736)
Q Consensus 596 -------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~ 646 (736)
........+||+.|+|||++.+ ..++.++|||||||++|||++|++||...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 1112344689999999999986 67999999999999999999999999743
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-33 Score=313.84 Aligned_cols=235 Identities=20% Similarity=0.226 Sum_probs=187.4
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|.+.+.||+|+||.||+|+.. +++.||||++.+.. ...+.+.+|+.+|++++||||+++++++.+....++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56777889999999999999964 58999999996532 34567889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccC----CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCC
Q 041821 537 EYVEKQSLDKHLFSS----YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 537 e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~ 596 (736)
||+++|+|.+++... ..+++..+..++.||+.||.|||+. +..+||+|||+++.+.....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~ 344 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence 999999999998753 3699999999999999999999975 34789999999987654432
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
. ....+||+.|||||++.+..++.++|||||||++|||++|+.||........ ...+. ..+....
T Consensus 345 ~--~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-----~~~~~----~~i~~~~---- 409 (543)
T 3c4z_A 345 K--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-----NKELK----QRVLEQA---- 409 (543)
T ss_dssp C--BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-----HHHHH----HHHHHCC----
T ss_pred c--cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-----HHHHH----HHHhhcc----
Confidence 2 3345799999999999999999999999999999999999999975432111 11111 1111110
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM-----DSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 720 (736)
..++...+..+.+++.+||+.||++||++ .+|++|
T Consensus 410 ---------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 410 ---------VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp ---------CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred ---------cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 11222335678899999999999999965 667653
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=301.59 Aligned_cols=237 Identities=20% Similarity=0.291 Sum_probs=186.5
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---------ccHHHHHHHHHHHhcC-CCCceeeEEEEEE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---------QGEEVFWAEVSTIGKI-YHMNLVRMWGFCS 527 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 527 (736)
.....|.+.+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+.+++++ +||||+++++++.
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 34567888899999999999999964 69999999985432 1135578999999999 7999999999999
Q ss_pred eCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCccccc
Q 041821 528 EGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLS 591 (736)
Q Consensus 528 ~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~ 591 (736)
.....++||||+++++|.+++.....+++..+..++.||+.||.|||+. +..+||+|||++..+
T Consensus 171 ~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 171 SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp BSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred eCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 9999999999999999999998777899999999999999999999975 347899999999877
Q ss_pred CCCCCcceeecccccCcccChhcccC------CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH
Q 041821 592 QRGSNSSQFSQIRGTKGYMAPEWASN------LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK 665 (736)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (736)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... . .....
T Consensus 251 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~------~---~~~~~-- 316 (365)
T 2y7j_A 251 EPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ------I---LMLRM-- 316 (365)
T ss_dssp CTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------H---HHHHH--
T ss_pred CCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH------H---HHHHH--
Confidence 65432 345679999999999863 3588999999999999999999999963210 0 11111
Q ss_pred HHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 666 RKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 666 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+..+. . ....+.. . ..+..+.+++.+||+.||++|||+.+++++
T Consensus 317 --i~~~~---~-~~~~~~~-~----~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 317 --IMEGQ---Y-QFSSPEW-D----DRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp --HHHTC---C-CCCHHHH-S----SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --HHhCC---C-CCCCccc-c----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11110 0 0000000 0 123568899999999999999999999975
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=312.33 Aligned_cols=177 Identities=20% Similarity=0.308 Sum_probs=137.6
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC-----CeE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG-----RHR 532 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 532 (736)
.+|.+.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.+|++++|||||++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 5688999999999999999985 468999999996532 3346788999999999999999999999543 568
Q ss_pred EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~ 596 (736)
++||||+. ++|.+++.....+++..+..++.||+.||.|||+.+ ..+||+|||+|+.......
T Consensus 133 ~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 211 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN 211 (458)
T ss_dssp EEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTT
T ss_pred EEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccc
Confidence 99999984 899999988888999999999999999999999763 3789999999987653221
Q ss_pred c-------------------------ceeecccccCcccChhcc-cCCCCccccceechhHHHHHHHhC
Q 041821 597 S-------------------------SQFSQIRGTKGYMAPEWA-SNLPITAKVDVYSYGVVILEMVKG 639 (736)
Q Consensus 597 ~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwS~Gvvl~el~tg 639 (736)
. ......+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 212 GNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 1 123456789999999986 456799999999999999999994
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=301.44 Aligned_cols=241 Identities=21% Similarity=0.228 Sum_probs=171.4
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCC-CCceeeEEEEEE--------eC
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIY-HMNLVRMWGFCS--------EG 529 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~~ 529 (736)
..+|.+.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.+++++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 45688899999999999999995 468999999985433 34567889999999996 999999999995 33
Q ss_pred CeEEEEEecCCCCCHhhhccc---CCCCCHHHHHHHHHHHHHHhhhhhcCC--C----------------ccEEcccCcc
Q 041821 530 RHRLLIYEYVEKQSLDKHLFS---SYFLGWKERFKVALGTAKGLAYLHHDE--F----------------EPKIADFGLA 588 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~---~~~l~~~~~~~i~~~i~~gL~yLH~~~--~----------------~~kl~DFGla 588 (736)
...++||||+. |+|.+++.. ...+++..+..++.||+.||.|||+.+ + .+||+|||++
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccc
Confidence 45799999996 799988864 447999999999999999999999876 3 7899999999
Q ss_pred cccCCCCCcc----------eeecccccCcccChhcc---cCCCCccccceechhHHHHHHHhCCCCCCccccCCccchh
Q 041821 589 KLSQRGSNSS----------QFSQIRGTKGYMAPEWA---SNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEA 655 (736)
Q Consensus 589 ~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~ 655 (736)
+......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||.......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----- 260 (337)
T 3ll6_A 186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR----- 260 (337)
T ss_dssp BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-----
Confidence 8765432211 11245689999999998 56678999999999999999999999986321100
Q ss_pred HHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccccc
Q 041821 656 ELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEI 730 (736)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 730 (736)
. ...... ..........+.+++.+||+.||++|||+.|++++|+.+......
T Consensus 261 ----~---------------~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 261 ----I---------------VNGKYS----IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp ------------------------CC----CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred ----h---------------hcCccc----CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 0 000000 011111123577899999999999999999999999988654433
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-34 Score=296.89 Aligned_cols=243 Identities=22% Similarity=0.277 Sum_probs=180.5
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC--CCc--EEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA--DGR--AVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~--~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 531 (736)
...+|++.+.||+|+||.||+|+.. +++ .||||+++.. ....+.+.+|+.++++++||||+++++++.++.
T Consensus 16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP- 94 (291)
T ss_dssp CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-
Confidence 3467889999999999999999843 233 6899998653 234567899999999999999999999998765
Q ss_pred EEEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRG 594 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~ 594 (736)
.++||||+++++|.+++... ..+++..+..++.|+++||.|||+.+ ..+||+|||+++.....
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 88999999999999998764 46899999999999999999999763 36899999999877554
Q ss_pred CCcc-eeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhc
Q 041821 595 SNSS-QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 595 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (736)
.... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ..... .+..
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---------~~~~~----~~~~-- 239 (291)
T 1u46_A 175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG---------SQILH----KIDK-- 239 (291)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH---------HHHHH----HHHT--
T ss_pred ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH---------HHHHH----HHHc--
Confidence 3321 1233557889999999998889999999999999999999 9999864321 11111 1110
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
.......+...+..+.+++.+||+.||++|||+.+++++|+++...
T Consensus 240 ---------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 240 ---------EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp ---------SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred ---------cCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 0001112223456789999999999999999999999999987653
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=294.13 Aligned_cols=251 Identities=17% Similarity=0.168 Sum_probs=189.0
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEE-EeCCeEEEEEec
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFC-SEGRHRLLIYEY 538 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e~ 538 (736)
..+|.+.+.||+|+||.||+|+. .+++.||||++..... .+.+.+|+.++++++|++++..+..+ .+++..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 46788999999999999999994 5689999998754322 23477899999999988877766655 677888999999
Q ss_pred CCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC-------------------CccEEcccCcccccCCCCCcc
Q 041821 539 VEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE-------------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 539 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~-------------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
+ +++|.+++.. ...+++..+..++.||+.||.|||+.+ ..+||+|||+++.........
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 165 (296)
T 4hgt_A 87 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp C-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCc
Confidence 9 9999999974 447999999999999999999999653 358999999998775543311
Q ss_pred -----eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 599 -----QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 599 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .......... ...
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~---~~~--- 237 (296)
T 4hgt_A 166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR--QKYERISEKK---MST--- 237 (296)
T ss_dssp BCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS--SHHHHHHHHH---HHS---
T ss_pred cCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh--hhhhhhhccc---ccc---
Confidence 123567999999999999999999999999999999999999999754332221 1111111110 000
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccccc
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEIH 731 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 731 (736)
...... . ..+..+.+++.+||+.||++|||+.+|++.|+++.++....
T Consensus 238 --~~~~~~----~----~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~ 285 (296)
T 4hgt_A 238 --PIEVLC----K----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp --CHHHHT----T----TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCC
T ss_pred --hhhhhh----c----cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 000000 1 11357889999999999999999999999999987766543
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=299.62 Aligned_cols=234 Identities=23% Similarity=0.312 Sum_probs=178.0
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEe------CCeE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE------GRHR 532 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~------~~~~ 532 (736)
...|.+.+.||+|+||.||+|+. .+++.||||++.......+.+.+|+.+++++ +||||+++++++.. ....
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~ 102 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 102 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceE
Confidence 35678889999999999999995 4689999999976656667889999999999 79999999999987 4688
Q ss_pred EEEEecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRG 594 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~ 594 (736)
++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+ ..+||+|||++......
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 182 (326)
T 2x7f_A 103 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182 (326)
T ss_dssp EEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC-----
T ss_pred EEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcC
Confidence 9999999999999999764 37899999999999999999999763 37899999999866432
Q ss_pred CCcceeecccccCcccChhccc-----CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 595 SNSSQFSQIRGTKGYMAPEWAS-----NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
.. ......||+.|+|||++. +..++.++|||||||++|||++|+.||..... .. ..... .
T Consensus 183 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~-~~~~~----~ 247 (326)
T 2x7f_A 183 VG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP--------MR-ALFLI----P 247 (326)
T ss_dssp ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH--------HH-HHHHH----H
T ss_pred cc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH--------HH-HHHHh----h
Confidence 21 133457899999999987 56689999999999999999999999863211 00 00000 0
Q ss_pred hhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 670 YEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 670 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
... . +.. .+...+..+.+++.+||+.||++|||+.+++++
T Consensus 248 ~~~---~-----~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 248 RNP---A-----PRL---KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HSC---C-----CCC---SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cCc---c-----ccC---CccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000 0 111 011223578899999999999999999999975
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-34 Score=302.01 Aligned_cols=247 Identities=21% Similarity=0.266 Sum_probs=176.8
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccH--HHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGE--EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
++|.+.+.||+|+||.||+|+.. +++.||||++....... ..+.+|+.+|++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 35788899999999999999954 68999999996533221 2356799999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceee
Q 041821 539 VEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 539 ~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
++ |+|.+++.... .+++..+..++.||+.||.|||+. +..+||+|||+++....... ...
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~--~~~ 158 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK--TYD 158 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC----------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc--ccc
Confidence 98 68988887654 699999999999999999999975 33789999999986543322 234
Q ss_pred cccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 602 QIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .. ....+.+..............
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~----~~~~i~~~~~~~~~~~~~~~~ 229 (324)
T 3mtl_A 159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV-----EE----QLHFIFRILGTPTEETWPGIL 229 (324)
T ss_dssp ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HH----HHHHHHHHHCCCCTTTSTTGG
T ss_pred cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HH----HHHHHHHHhCCCChHhchhhh
Confidence 4578999999999876 5689999999999999999999999974321 11 111111111110000000000
Q ss_pred c---------CccCCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 D---------PRLKGK----FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d---------~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. +..... ........+.+|+.+||+.||++|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp GCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0 000000 011224578899999999999999999999985
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=297.45 Aligned_cols=237 Identities=12% Similarity=0.083 Sum_probs=189.6
Q ss_pred HHHhhhhcccccCeeceeEEEEee------eCCCcEEEEEEeCcccccHHHHHHHHHHHhcCC---CCceeeEEEEEEeC
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGV------LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY---HMNLVRMWGFCSEG 529 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 529 (736)
+....|.+.+.||+|+||.||+|+ ...++.||||+++.. ...++..|++++.+++ |+||+++++++...
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 344678888999999999999994 445889999999654 3456778888888887 99999999999999
Q ss_pred CeEEEEEecCCCCCHhhhccc-----CCCCCHHHHHHHHHHHHHHhhhhhcC---------------------------C
Q 041821 530 RHRLLIYEYVEKQSLDKHLFS-----SYFLGWKERFKVALGTAKGLAYLHHD---------------------------E 577 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~-----~~~l~~~~~~~i~~~i~~gL~yLH~~---------------------------~ 577 (736)
+..+||||||++|+|.+++.. ...+++..+..|+.||++||+|||+. +
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~ 219 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLS 219 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------C
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccccc
Confidence 999999999999999999973 45799999999999999999999964 3
Q ss_pred CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHH
Q 041821 578 FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAEL 657 (736)
Q Consensus 578 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~ 657 (736)
..+||+|||+|+.+............+||+.|||||++.+..++.++|||||||++|||++|+.||.......
T Consensus 220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------- 292 (365)
T 3e7e_A 220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE------- 292 (365)
T ss_dssp TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-------
T ss_pred CCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-------
Confidence 5789999999986654333444566789999999999999999999999999999999999999986332110
Q ss_pred HHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHhccccc
Q 041821 658 KRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKR-PTMDSVVQSLLECETE 727 (736)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl~~L~~~~~~ 727 (736)
..+...+.... ..+.+.+++..|++.+|.+| |++.++.+.|++..+.
T Consensus 293 --------------------~~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 293 --------------------CKPEGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp --------------------EEECSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --------------------eeechhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 00111111111 24456778889999999999 6888888888876543
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=327.93 Aligned_cols=235 Identities=22% Similarity=0.226 Sum_probs=189.3
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 531 (736)
.+...+|++.+.||+|+||.||+|+.. +++.||||++++. ....+.+..|..+|..+ +||||+++++++.+.+.
T Consensus 337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~ 416 (674)
T 3pfq_A 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 416 (674)
T ss_dssp ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence 455667889999999999999999954 5889999999753 23346678899999988 79999999999999999
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~ 595 (736)
.+|||||+++|+|.+++.....+++..++.++.||+.||+|||+. +..+||+|||+++......
T Consensus 417 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 496 (674)
T 3pfq_A 417 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 496 (674)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT
T ss_pred EEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC
Confidence 999999999999999998877899999999999999999999975 3378999999998644332
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
. .....+||+.|||||++.+..|+.++|||||||+||||++|+.||..... ... ...+.
T Consensus 497 ~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~---------~~~----~~~i~------ 555 (674)
T 3pfq_A 497 V--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---------DEL----FQSIM------ 555 (674)
T ss_dssp C--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHH----HHHHH------
T ss_pred c--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH---------HHH----HHHHH------
Confidence 2 24567899999999999999999999999999999999999999974321 111 11111
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM-----DSVVQS 720 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 720 (736)
... ..++...+..+.+|+.+||+.||++||++ +||++|
T Consensus 556 -----~~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 556 -----EHN--VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp -----SSC--CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred -----hCC--CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 111 11233345678999999999999999997 777754
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-33 Score=296.27 Aligned_cols=247 Identities=15% Similarity=0.208 Sum_probs=184.9
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCC-CCceeeEEEEEEe--CCeEEEEEe
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-HMNLVRMWGFCSE--GRHRLLIYE 537 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~e 537 (736)
..|.+.+.||+|+||.||+|+. .+++.||||+++.. ..+.+.+|+.++++++ ||||+++++++.+ ....++|||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 6788999999999999999984 56899999999643 3467889999999997 9999999999998 667899999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC-----------------CccEEcccCcccccCCCCCccee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE-----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|+++++|.+++.. +++.++..++.||+.||.|||+.+ ..+||+|||+++....... .
T Consensus 114 ~~~~~~l~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~ 187 (330)
T 3nsz_A 114 HVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE---Y 187 (330)
T ss_dssp CCCCCCHHHHGGG---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC---C
T ss_pred ccCchhHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc---c
Confidence 9999999999853 889999999999999999999752 2689999999987655432 3
Q ss_pred ecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH-----HHHhhhc--
Q 041821 601 SQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK-----RKILYEE-- 672 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-- 672 (736)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+........ ..+....
T Consensus 188 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~ 263 (330)
T 3nsz_A 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN----YDQLVRIAKVLGTEDLYDYIDKYNIE 263 (330)
T ss_dssp CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH----HHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch----HHHHHHHHHhcCCchhhhHHHHhccc
Confidence 44578999999999887 67999999999999999999999999643221 111111111100 0000000
Q ss_pred -ccccccccc--------CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 673 -EAWIEEIVD--------PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 673 -~~~~~~~~d--------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......... ...........+..+.+|+.+||+.||++|||++|+++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000000 000111112235678999999999999999999999986
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=307.93 Aligned_cols=182 Identities=20% Similarity=0.332 Sum_probs=150.1
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC-----CeE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG-----RHR 532 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 532 (736)
..|.+.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.+|++++||||+++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 5788999999999999999995 458899999997532 3346788999999999999999999999876 578
Q ss_pred EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~ 596 (736)
+|||||+. ++|.+++.....+++..+..++.||++||.|||+. +..+||+|||+++.......
T Consensus 106 ~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 184 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKD 184 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-----
T ss_pred EEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccccccc
Confidence 99999997 69999998888899999999999999999999975 33789999999987654322
Q ss_pred c--------------------ceeecccccCcccChhcc-cCCCCccccceechhHHHHHHHhCCCCCC
Q 041821 597 S--------------------SQFSQIRGTKGYMAPEWA-SNLPITAKVDVYSYGVVILEMVKGIRLSN 644 (736)
Q Consensus 597 ~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwS~Gvvl~el~tg~~p~~ 644 (736)
. ......+||+.|+|||++ ....++.++|||||||++|||++|..|+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 185 TNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp --------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 1 123567899999999986 45669999999999999999998655543
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=294.26 Aligned_cols=235 Identities=21% Similarity=0.248 Sum_probs=186.2
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc----------ccHHHHHHHHHHHhcCC-CCceeeEEEEEEe
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH----------QGEEVFWAEVSTIGKIY-HMNLVRMWGFCSE 528 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----------~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 528 (736)
...|.+.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.+++++. ||||+++++++.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 356888899999999999999964 58999999985432 12356789999999996 9999999999999
Q ss_pred CCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccC
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQ 592 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~ 592 (736)
....++||||+++++|.+++.....+++..+..++.||+.||.|||+. +..+||+|||++....
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 175 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 175 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcC
Confidence 999999999999999999998777899999999999999999999975 3378999999998765
Q ss_pred CCCCcceeecccccCcccChhccc------CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHH
Q 041821 593 RGSNSSQFSQIRGTKGYMAPEWAS------NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR 666 (736)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 666 (736)
.... .....||+.|+|||++. ...++.++||||||+++|||++|+.||..... . ....
T Consensus 176 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~---~~~~---- 239 (298)
T 1phk_A 176 PGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ------M---LMLR---- 239 (298)
T ss_dssp TTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------H---HHHH----
T ss_pred CCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH------H---HHHH----
Confidence 4332 34456899999999985 45689999999999999999999999863211 0 1111
Q ss_pred HHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 667 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+..+. . .. ........+..+.+++.+||+.||++|||+.+++++
T Consensus 240 ~~~~~~---~-~~-----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 240 MIMSGN---Y-QF-----GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHHHTC---C-CC-----CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHhcCC---c-cc-----CcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 111111 0 00 001112334678899999999999999999999875
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-34 Score=295.69 Aligned_cols=235 Identities=22% Similarity=0.249 Sum_probs=168.9
Q ss_pred HHHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccc--c-HHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQ--G-EEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~--~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
+...+|++.+.||+|+||.||+|+. .+++.||||++..... . .+.+..+...++.++||||+++++++.+++..++
T Consensus 4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 3456788999999999999999995 5689999999975422 2 2334455566888999999999999999999999
Q ss_pred EEecCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcC-C----------------CccEEcccCcccccCC
Q 041821 535 IYEYVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHD-E----------------FEPKIADFGLAKLSQR 593 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~-~----------------~~~kl~DFGla~~~~~ 593 (736)
||||++ |+|.+++.. ...+++..+..++.|++.||.|||++ + ..+||+|||+++....
T Consensus 84 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 84 CMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp EEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred EEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 999997 588777653 45799999999999999999999975 3 3789999999987654
Q ss_pred CCCcceeecccccCcccChhcc----cCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWA----SNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
... .....||+.|+|||++ .+..++.++||||||+++|||++|+.||...... ...+ .....
T Consensus 163 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~----~~~~~ 228 (290)
T 3fme_A 163 DVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-------FQQL----KQVVE 228 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-------HHHH----HHHHH
T ss_pred ccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-------HHHH----HHHhc
Confidence 332 2334699999999996 4567899999999999999999999999632110 0111 11000
Q ss_pred hhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 670 YEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 670 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.. .+ .......+..+.+++.+||+.||++|||+.|++++
T Consensus 229 ~~---------~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 229 EP---------SP---QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp SC---------CC---CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cC---------CC---CcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 00 00 11112234578899999999999999999999874
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-33 Score=305.96 Aligned_cols=264 Identities=19% Similarity=0.214 Sum_probs=194.9
Q ss_pred cccccHHHHHHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCC--------CCceee
Q 041821 451 FRRFSYAELKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY--------HMNLVR 521 (736)
Q Consensus 451 ~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~ 521 (736)
...+...++...+|.+.++||+|+||.||+|+. .+++.||||+++......+.+.+|+.+|++++ |+||++
T Consensus 26 ~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~ 105 (397)
T 1wak_A 26 YHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQ 105 (397)
T ss_dssp CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCC
T ss_pred ceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence 444555566678899999999999999999984 45889999999876666678899999999985 888999
Q ss_pred EEEEEE----eCCeEEEEEecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcC-CC----------------
Q 041821 522 MWGFCS----EGRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHD-EF---------------- 578 (736)
Q Consensus 522 l~~~~~----~~~~~~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~-~~---------------- 578 (736)
+++++. +....+|||||+ +++|.+.+... ..+++..+..++.||++||.|||++ ++
T Consensus 106 ~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 106 LLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNE 184 (397)
T ss_dssp EEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred eecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence 999998 556889999999 56666665443 4699999999999999999999976 32
Q ss_pred -------------------------------------------------ccEEcccCcccccCCCCCcceeecccccCcc
Q 041821 579 -------------------------------------------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGY 609 (736)
Q Consensus 579 -------------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y 609 (736)
.+||+|||+++..... .....||+.|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y 259 (397)
T 1wak_A 185 QYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQY 259 (397)
T ss_dssp HHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGG
T ss_pred hhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcc
Confidence 5899999999876532 3345789999
Q ss_pred cChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHH-----Hhhhc--ccccc-----
Q 041821 610 MAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRK-----ILYEE--EAWIE----- 677 (736)
Q Consensus 610 ~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--~~~~~----- 677 (736)
+|||++.+..++.++|||||||++|||++|+.||........................ +..+. ..+..
T Consensus 260 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 339 (397)
T 1wak_A 260 RSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL 339 (397)
T ss_dssp CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSB
T ss_pred cCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccc
Confidence 9999999999999999999999999999999999754432221111111111110000 00000 00000
Q ss_pred -ccccCc---------cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 678 -EIVDPR---------LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 678 -~~~d~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+.+.. -....+......+.+|+.+||+.||++|||+.||++|
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 340 KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp SSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred ccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 000000 0112456778899999999999999999999999975
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-33 Score=294.30 Aligned_cols=237 Identities=22% Similarity=0.294 Sum_probs=182.3
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
+.....|.+.+.||+|+||.||+|+.. +++.||||.+.... ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 445677889999999999999999964 48999999996543 3456889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcce
Q 041821 537 EYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 537 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~ 599 (736)
||+++++|.+++.. ...+++..+..++.|++.||.|||+. +..+||+|||++........ .
T Consensus 104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--~ 181 (314)
T 3com_A 104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA--K 181 (314)
T ss_dssp ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS--C
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc--c
Confidence 99999999999863 45799999999999999999999975 34789999999987654322 1
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||..... .. ..... ...
T Consensus 182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~-~~~~~----~~~-------- 240 (314)
T 3com_A 182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP--------MR-AIFMI----PTN-------- 240 (314)
T ss_dssp BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH--------HH-HHHHH----HHS--------
T ss_pred cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh--------HH-HHHHH----hcC--------
Confidence 3345689999999999998999999999999999999999999863211 00 00000 000
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+.. ..+...+..+.+++.+||+.||++|||+.+++++
T Consensus 241 ~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 241 PPPTF--RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp CCCCC--SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CCccc--CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00000 1122234578899999999999999999999874
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-33 Score=296.92 Aligned_cols=249 Identities=19% Similarity=0.196 Sum_probs=181.1
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccccc------HHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQG------EEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
..+|.+.+.||+|+||.||+|+.. +++.||||++...... .+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 457888999999999999999954 5899999999643211 245789999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC
Q 041821 534 LIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~ 596 (736)
+||||+++ +|.+++.... .+++..+..++.|+++||.|||+.+ ..+||+|||+++.......
T Consensus 89 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 167 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 167 (346)
T ss_dssp EEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred EEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcc
Confidence 99999985 8888887654 6899999999999999999999753 3789999999987654322
Q ss_pred cceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
......||+.|+|||++.+. .++.++|||||||++|||++|.+||..... .... ..+...........
T Consensus 168 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-----~~~~----~~i~~~~~~~~~~~ 236 (346)
T 1ua2_A 168 --AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-----LDQL----TRIFETLGTPTEEQ 236 (346)
T ss_dssp --CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHH----HHHHHHHCCCCTTT
T ss_pred --cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-----HHHH----HHHHHHcCCCChhh
Confidence 23456789999999999764 589999999999999999999998864321 1111 11111111100000
Q ss_pred ccc------cccCccCCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 676 IEE------IVDPRLKGKFN-----TNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 676 ~~~------~~d~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
... .+........+ ...+..+.+|+.+||+.||++|||+.|++++-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp SSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred hhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 000 00000001111 12246789999999999999999999999874
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-33 Score=303.41 Aligned_cols=248 Identities=19% Similarity=0.199 Sum_probs=178.5
Q ss_pred HHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEe----------
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE---------- 528 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 528 (736)
...+|.+.+.||+|+||.||+|+. .+++.||||++...... ..+|+++|+.++||||+++++++..
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~---~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 81 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY---KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ 81 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS---CCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch---HHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence 446788999999999999999984 56899999998543222 2369999999999999999999844
Q ss_pred ----------------------------CCeEEEEEecCCCCCHhhhcc----cCCCCCHHHHHHHHHHHHHHhhhhhcC
Q 041821 529 ----------------------------GRHRLLIYEYVEKQSLDKHLF----SSYFLGWKERFKVALGTAKGLAYLHHD 576 (736)
Q Consensus 529 ----------------------------~~~~~lv~e~~~~gsL~~~l~----~~~~l~~~~~~~i~~~i~~gL~yLH~~ 576 (736)
....++||||++ ++|.+.+. ....+++..+..++.||++||.|||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 160 (383)
T 3eb0_A 82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL 160 (383)
T ss_dssp ----------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 334789999998 57776664 355799999999999999999999965
Q ss_pred -----------------CCccEEcccCcccccCCCCCcceeecccccCcccChhcccCCC-CccccceechhHHHHHHHh
Q 041821 577 -----------------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKVDVYSYGVVILEMVK 638 (736)
Q Consensus 577 -----------------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el~t 638 (736)
+..+||+|||+++....... .....||+.|+|||++.+.. ++.++|||||||++|||++
T Consensus 161 gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~ 237 (383)
T 3eb0_A 161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237 (383)
T ss_dssp TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence 33689999999987654432 33456899999999988754 8999999999999999999
Q ss_pred CCCCCCccccCCccchhHHHHHHHHHH----HHHhhhccccccccccCcc-----CCCCCHHHHHHHHHHHHHcccCCCC
Q 041821 639 GIRLSNWVVEDGEGQEAELKRFVREVK----RKILYEEEAWIEEIVDPRL-----KGKFNTNQAATLIGIGISCVDEDRS 709 (736)
Q Consensus 639 g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~d~~~-----~~~~~~~~~~~l~~li~~cl~~dP~ 709 (736)
|+.||..... ...+..+..... ..+..... ...+..-+.. ....+...+..+.+|+.+||+.||+
T Consensus 238 g~~pf~~~~~-----~~~~~~i~~~~g~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 238 GKPLFSGETS-----IDQLVRIIQIMGTPTKEQMIRMNP-HYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp SSCSSCCSSH-----HHHHHHHHHHHCCCCHHHHHHHCT-TC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred CCCCCCCCCh-----HHHHHHHHHHhCCCCHHHHHHhCc-ccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 9999974321 111111111100 00000000 0011111111 1112223456789999999999999
Q ss_pred CCCCHHHHHHH
Q 041821 710 KRPTMDSVVQS 720 (736)
Q Consensus 710 ~RPs~~evl~~ 720 (736)
+|||+.|+++|
T Consensus 312 ~R~t~~e~l~h 322 (383)
T 3eb0_A 312 LRINPYEAMAH 322 (383)
T ss_dssp GSCCHHHHHTS
T ss_pred hCCCHHHHhcC
Confidence 99999999865
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=326.26 Aligned_cols=244 Identities=24% Similarity=0.313 Sum_probs=189.2
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCC----CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH 531 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 531 (736)
++...+|.+.+.||+|+||.||+|+... +..||||+++... ...+.+.+|+.+|++++||||+++++++. .+.
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence 3456778889999999999999998532 4579999986532 33467899999999999999999999985 456
Q ss_pred EEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRG 594 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~ 594 (736)
.++||||+++|+|.+++.... .+++..+..++.|+++||.|||+.++ .+||+|||+++.....
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred eEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 899999999999999997654 69999999999999999999997633 6899999999876543
Q ss_pred CCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
... ......+|+.|||||++.+..++.++|||||||++|||++ |..||..... ...... +..+.
T Consensus 545 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~---------~~~~~~----i~~~~- 609 (656)
T 2j0j_A 545 TYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN---------NDVIGR----IENGE- 609 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---------HHHHHH----HHHTC-
T ss_pred cce-eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH---------HHHHHH----HHcCC-
Confidence 322 2334557889999999998899999999999999999997 8889864321 111111 11111
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
....+...+..+.+++.+||+.||++|||+.+|+++|+++.++.
T Consensus 610 -----------~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 610 -----------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp -----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -----------CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 01122334567889999999999999999999999999987553
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-33 Score=300.52 Aligned_cols=246 Identities=23% Similarity=0.298 Sum_probs=177.4
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC------e
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR------H 531 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 531 (736)
..|.+.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.+|++++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 4678889999999999999995 468999999996532 23466889999999999999999999998753 4
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~ 595 (736)
.++||||+ +++|.+++.. ..+++..+..++.||++||.|||+. +..+||+|||+++.....
T Consensus 105 ~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 181 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE- 181 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS-
T ss_pred EEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccc-
Confidence 59999999 7899999876 4699999999999999999999975 347899999999876432
Q ss_pred CcceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHH-------HHH
Q 041821 596 NSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV-------KRK 667 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~ 667 (736)
....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ...+..+.... ...
T Consensus 182 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 182 ----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH-----LDQLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp ----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHHHCCCCHHHHHT
T ss_pred ----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHhcCCCCHHHHHH
Confidence 344678999999999887 6799999999999999999999999974321 11111111100 000
Q ss_pred Hhhhc-ccc---ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 668 ILYEE-EAW---IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 668 ~~~~~-~~~---~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+.... ..+ +.......+. .........+.+|+.+||+.||++|||+.|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhhHHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00000 000 0000001110 1112234678899999999999999999999986
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-33 Score=306.97 Aligned_cols=181 Identities=19% Similarity=0.197 Sum_probs=155.6
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcC------CCCceeeEEEEEEeCCeE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKI------YHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 532 (736)
...+|++.+.||+|+||.||+|+.. +++.||||+++......+.+.+|+.+++.+ .|+||+++++++......
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 3456889999999999999999854 589999999987665566778888888776 577999999999999999
Q ss_pred EEEEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCCC----------------c--cEEcccCcccccC
Q 041821 533 LLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDEF----------------E--PKIADFGLAKLSQ 592 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~--~kl~DFGla~~~~ 592 (736)
++||||+. ++|.+++.... .+++..+..++.||+.||.|||+.++ . +||+|||+++...
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 99999996 79999887654 59999999999999999999996422 3 8999999997654
Q ss_pred CCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCcc
Q 041821 593 RGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWV 646 (736)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~ 646 (736)
.. .....||+.|+|||++.+..++.++|||||||++|||++|++||...
T Consensus 254 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 254 QR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred Cc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 32 33457899999999999999999999999999999999999999743
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=299.96 Aligned_cols=243 Identities=19% Similarity=0.215 Sum_probs=187.3
Q ss_pred HhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccccc------------------HHHHHHHHHHHhcCCCCceeeE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQG------------------EEVFWAEVSTIGKIYHMNLVRM 522 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~E~~~l~~l~h~niv~l 522 (736)
...|.+.+.||+|+||.||+|+. +++.||||++...... .+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 45788999999999999999999 8999999998643211 1778999999999999999999
Q ss_pred EEEEEeCCeEEEEEecCCCCCHhhh------ccc--CCCCCHHHHHHHHHHHHHHhhhhhc-C----------------C
Q 041821 523 WGFCSEGRHRLLIYEYVEKQSLDKH------LFS--SYFLGWKERFKVALGTAKGLAYLHH-D----------------E 577 (736)
Q Consensus 523 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~--~~~l~~~~~~~i~~~i~~gL~yLH~-~----------------~ 577 (736)
++++.+.+..++||||+++++|.++ +.. ...+++..+..++.|++.||.|||+ . +
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN 188 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTT
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCC
Confidence 9999999999999999999999998 665 4579999999999999999999998 4 3
Q ss_pred CccEEcccCcccccCCCCCcceeecccccCcccChhcccCC-CCcc-ccceechhHHHHHHHhCCCCCCccccCCccchh
Q 041821 578 FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL-PITA-KVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEA 655 (736)
Q Consensus 578 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~ 655 (736)
..+||+|||++...... ......||+.|+|||++.+. .++. ++||||||+++|||++|+.||......
T Consensus 189 ~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------ 258 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL------ 258 (348)
T ss_dssp SCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS------
T ss_pred CcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH------
Confidence 47899999999876443 24456799999999999887 6766 999999999999999999999743221
Q ss_pred HHHHHHHHHHHHHhhhccccc---cccccCcc---CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 656 ELKRFVREVKRKILYEEEAWI---EEIVDPRL---KGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~---~~~~d~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
... ...+..+..... .....+.. ........+..+.+++.+||+.||++|||+.|++++
T Consensus 259 --~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 259 --VEL----FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp --HHH----HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred --HHH----HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 011 111111110000 00000000 000112345678999999999999999999999985
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-33 Score=291.08 Aligned_cols=229 Identities=24% Similarity=0.293 Sum_probs=177.6
Q ss_pred ccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 467 KEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
...||+|+||.||+|+. .+++.||||.+.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+++++|
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence 34899999999999994 568899999996543 3456789999999999999999999999999999999999999999
Q ss_pred hhhcccCC---CCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEcccCcccccCCCCCcceeeccc
Q 041821 545 DKHLFSSY---FLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADFGLAKLSQRGSNSSQFSQIR 604 (736)
Q Consensus 545 ~~~l~~~~---~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~~~~~~~~~~~~~~~~ 604 (736)
.+++.... .+++..+..++.|++.||.|||+. +..+||+|||+++....... ......
T Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~ 184 (295)
T 2clq_A 107 SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP--CTETFT 184 (295)
T ss_dssp HHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-------CCCC
T ss_pred HHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC--cccccC
Confidence 99997642 567899999999999999999965 34789999999987654322 133456
Q ss_pred ccCcccChhcccCCC--CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccC
Q 041821 605 GTKGYMAPEWASNLP--ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDP 682 (736)
Q Consensus 605 gt~~y~aPE~~~~~~--~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 682 (736)
||+.|+|||++.+.. ++.++||||||+++|||++|+.||...... . ...... . . ....+
T Consensus 185 ~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~--~~~~~~---~-~--------~~~~~ 245 (295)
T 2clq_A 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP-----Q--AAMFKV---G-M--------FKVHP 245 (295)
T ss_dssp CCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH-----H--HHHHHH---H-H--------HCCCC
T ss_pred CCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch-----h--HHHHhh---c-c--------ccccc
Confidence 899999999987654 889999999999999999999998632110 0 000000 0 0 00111
Q ss_pred ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 683 RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 683 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+...+..+.+++.+||+.||++|||+.+++++
T Consensus 246 ----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 246 ----EIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ----CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ----cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1222334678899999999999999999999875
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-33 Score=296.59 Aligned_cols=249 Identities=19% Similarity=0.195 Sum_probs=181.7
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEe--------C
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE--------G 529 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~ 529 (736)
.+|.+.+.||+|+||.||+|+. .+++.||||++.... .....+.+|+.++++++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5788999999999999999995 568999999985432 234567899999999999999999999987 4
Q ss_pred CeEEEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccC
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQ 592 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~ 592 (736)
+..++||||+++ +|.+.+... ..+++.++..++.||+.||.|||+. +..+||+|||+++.+.
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 175 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 175 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccccc
Confidence 468999999984 777766554 4799999999999999999999975 3378999999998765
Q ss_pred CCCCc--ceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 593 RGSNS--SQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 593 ~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .... ..+.....
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~---~~i~~~~~ 246 (351)
T 3mi9_A 176 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE------QHQL---ALISQLCG 246 (351)
T ss_dssp CCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHH---HHHHHHHC
T ss_pred ccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh------HHHH---HHHHHHhC
Confidence 33221 12345678999999999876 4589999999999999999999999874321 1111 11111110
Q ss_pred hhccccccccc--------cCccCCCCCH-H------HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 670 YEEEAWIEEIV--------DPRLKGKFNT-N------QAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 670 ~~~~~~~~~~~--------d~~~~~~~~~-~------~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
........... .......... . ....+.+|+.+||+.||++|||+.|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 247 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00000000000 0000000111 1 13458899999999999999999999986
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=4.5e-34 Score=302.63 Aligned_cols=245 Identities=21% Similarity=0.295 Sum_probs=185.5
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
++....|.+.+.||+|+||.||+|+... .+|+|+++... ...+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i 106 (319)
T 2y4i_B 29 DIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI 106 (319)
T ss_dssp SSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred cCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence 3445678899999999999999999743 59999986432 233457789999999999999999999999999999
Q ss_pred EEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC---------------ccEEcccCcccccCCCCC--
Q 041821 535 IYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF---------------EPKIADFGLAKLSQRGSN-- 596 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~---------------~~kl~DFGla~~~~~~~~-- 596 (736)
||||+++++|.+++.... .+++..+..++.||+.||.|||+.++ .+||+|||+++.......
T Consensus 107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 107 ITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp ECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--CCEECCCSCCC---------
T ss_pred EeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeCCCEEEeecCCccccccccccc
Confidence 999999999999998755 79999999999999999999997643 689999999876532211
Q ss_pred -cceeecccccCcccChhcccC---------CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHH
Q 041821 597 -SSQFSQIRGTKGYMAPEWASN---------LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR 666 (736)
Q Consensus 597 -~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 666 (736)
........||+.|+|||++.. ..++.++||||||+++|||++|+.||..... .....
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---------~~~~~---- 253 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA---------EAIIW---- 253 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH---------HHHHH----
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHH----
Confidence 112334568999999999874 4578999999999999999999999864321 11111
Q ss_pred HHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 667 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
....+ ..+... ....+..+.+++.+||+.||++|||+.+|+++|+.+.+..
T Consensus 254 ~~~~~--------~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 254 QMGTG--------MKPNLS---QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp HHHTT--------CCCCCC---CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred HhccC--------CCCCCC---cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 11111 111111 0112346888999999999999999999999999987654
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-32 Score=287.83 Aligned_cols=236 Identities=25% Similarity=0.320 Sum_probs=177.7
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEe-----------
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE----------- 528 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----------- 528 (736)
...|++.+.||+|+||.||+|+. .+++.||||++.......+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 45788999999999999999995 468999999997655566778999999999999999999999865
Q ss_pred --CCeEEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCccc
Q 041821 529 --GRHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAK 589 (736)
Q Consensus 529 --~~~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~ 589 (736)
....++||||+++++|.+++.... .+++..+..++.|+++||.|||+++ ..+||+|||+++
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 164 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCS
T ss_pred ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchh
Confidence 356799999999999999997544 6789999999999999999999763 368999999998
Q ss_pred ccCCCCC------------cceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhH
Q 041821 590 LSQRGSN------------SSQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAE 656 (736)
Q Consensus 590 ~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~ 656 (736)
....... ........||+.|+|||++.+. .++.++|||||||++|||++ |+.... .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~--------~ 233 (303)
T 1zy4_A 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM--------E 233 (303)
T ss_dssp CTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH--------H
T ss_pred hcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch--------h
Confidence 7643211 1123446789999999999865 68999999999999999998 443110 1
Q ss_pred HHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 657 LKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...... .+... ........+...+..+.+++.+||+.||++|||+.+++++
T Consensus 234 ~~~~~~----~~~~~---------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 234 RVNILK----KLRSV---------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHH----HHHST---------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHH----hcccc---------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111111 11110 1111122333445678899999999999999999999986
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-33 Score=296.67 Aligned_cols=247 Identities=19% Similarity=0.269 Sum_probs=168.6
Q ss_pred HHHHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
.+....|.+.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 34556788999999999999999994 46899999998653 2344678899999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccc--------CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccc
Q 041821 535 IYEYVEKQSLDKHLFS--------SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKL 590 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~--------~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~ 590 (736)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ..+||+|||++..
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999999863 346899999999999999999999763 3789999999987
Q ss_pred cCCCCCc---ceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHH
Q 041821 591 SQRGSNS---SQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR 666 (736)
Q Consensus 591 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 666 (736)
....... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||....... ... .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--------~~~----~ 238 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK--------VLM----L 238 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG--------HHH----H
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh--------HHH----H
Confidence 6543211 11234579999999999875 568999999999999999999999997432110 000 0
Q ss_pred HHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 667 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..............++.. ....+..+.+++.+||+.||++|||+.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 239 TLQNDPPSLETGVQDKEM----LKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp HHTSSCCCTTC-----CC----CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HhccCCCccccccccchh----hhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 000000000000111111 11223578899999999999999999999985
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-32 Score=293.96 Aligned_cols=251 Identities=20% Similarity=0.271 Sum_probs=189.7
Q ss_pred HHHHhhhhcccccCeeceeEEEEeee--CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCc------eeeEEEEEEeC
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVL--ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMN------LVRMWGFCSEG 529 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~ 529 (736)
++...+|++.+.||+|+||.||+|.. .+++.||||+++......+.+.+|+.+++.++|++ |+++++++.+.
T Consensus 10 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred CCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 33456789999999999999999985 35889999999876666677889999999887654 99999999999
Q ss_pred CeEEEEEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC------------------------------
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE------------------------------ 577 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~------------------------------ 577 (736)
+..++||||+ +++|.+++.... .+++..+..++.||++||+|||+.+
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~ 168 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDE 168 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred CcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccccc
Confidence 9999999999 899999997665 6899999999999999999999652
Q ss_pred -----CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCcc
Q 041821 578 -----FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEG 652 (736)
Q Consensus 578 -----~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~ 652 (736)
..+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 169 ~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--- 240 (339)
T 1z57_A 169 RTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK--- 240 (339)
T ss_dssp EEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH---
T ss_pred ccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH---
Confidence 24899999999865432 23457899999999999999999999999999999999999999743211
Q ss_pred chhHHHHHHHHH--------HHHHhhhc------ccc---------ccccccCc-cCCCCCHHHHHHHHHHHHHcccCCC
Q 041821 653 QEAELKRFVREV--------KRKILYEE------EAW---------IEEIVDPR-LKGKFNTNQAATLIGIGISCVDEDR 708 (736)
Q Consensus 653 ~~~~~~~~~~~~--------~~~~~~~~------~~~---------~~~~~d~~-~~~~~~~~~~~~l~~li~~cl~~dP 708 (736)
......... ........ ..| ......+. ............+.+|+.+||+.||
T Consensus 241 ---~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 317 (339)
T 1z57_A 241 ---EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317 (339)
T ss_dssp ---HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred ---HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence 111111110 00000000 000 00000000 0011234567789999999999999
Q ss_pred CCCCCHHHHHHH
Q 041821 709 SKRPTMDSVVQS 720 (736)
Q Consensus 709 ~~RPs~~evl~~ 720 (736)
++|||+.||+++
T Consensus 318 ~~Rpt~~ell~h 329 (339)
T 1z57_A 318 AKRITLREALKH 329 (339)
T ss_dssp TTSCCHHHHTTS
T ss_pred ccccCHHHHhcC
Confidence 999999999976
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.98 E-value=7e-34 Score=308.61 Aligned_cols=222 Identities=15% Similarity=0.096 Sum_probs=171.4
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCc----ccccHHHHHHHH---HHHhcCCCCceeeEE-------EEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGD----LHQGEEVFWAEV---STIGKIYHMNLVRMW-------GFC 526 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~----~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~~ 526 (736)
..|.+.+.||+|+||.||+|+. .+++.||||++.. .....+.+.+|+ ++|++++|||||+++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 4677889999999999999995 5689999999963 223457788999 556666899999998 776
Q ss_pred EeCCe-----------------EEEEEecCCCCCHhhhcccCCCCC-------HHHHHHHHHHHHHHhhhhhcC------
Q 041821 527 SEGRH-----------------RLLIYEYVEKQSLDKHLFSSYFLG-------WKERFKVALGTAKGLAYLHHD------ 576 (736)
Q Consensus 527 ~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~~l~-------~~~~~~i~~~i~~gL~yLH~~------ 576 (736)
.+.+. .+|||||+ +|+|.+++.....++ +..+..|+.||++||+|||+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD 231 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY 231 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 65532 78999999 689999997643333 588889999999999999975
Q ss_pred ----------CCccEEcccCcccccCCCCCcceeecccccCcccChhcccCC-----------CCccccceechhHHHHH
Q 041821 577 ----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL-----------PITAKVDVYSYGVVILE 635 (736)
Q Consensus 577 ----------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwS~Gvvl~e 635 (736)
+..+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++||
T Consensus 232 ikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e 305 (377)
T 3byv_A 232 LRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305 (377)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred CCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence 34789999999986432 2445668 999999999877 89999999999999999
Q ss_pred HHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 041821 636 MVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMD 715 (736)
Q Consensus 636 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 715 (736)
|++|+.||........ ...+... . . ..+..+.+|+.+||+.||++|||+.
T Consensus 306 lltg~~Pf~~~~~~~~------------------------~~~~~~~-~-~----~~~~~~~~li~~~L~~dp~~Rpt~~ 355 (377)
T 3byv_A 306 IWCADLPITKDAALGG------------------------SEWIFRS-C-K----NIPQPVRALLEGFLRYPKEDRLLPL 355 (377)
T ss_dssp HHHSSCCC------CC------------------------SGGGGSS-C-C----CCCHHHHHHHHHHTCSSGGGCCCHH
T ss_pred HHHCCCCCcccccccc------------------------hhhhhhh-c-c----CCCHHHHHHHHHHcCCCchhCCCHH
Confidence 9999999864321111 1111111 0 1 1235788999999999999999999
Q ss_pred HHHHH
Q 041821 716 SVVQS 720 (736)
Q Consensus 716 evl~~ 720 (736)
+++++
T Consensus 356 e~l~h 360 (377)
T 3byv_A 356 QAMET 360 (377)
T ss_dssp HHHTS
T ss_pred HHhhC
Confidence 99874
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=9.8e-33 Score=290.36 Aligned_cols=232 Identities=19% Similarity=0.213 Sum_probs=180.7
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-----ccHHHHHHHHHHHhcCCCCceeeEEEEEE--eCCeEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-----QGEEVFWAEVSTIGKIYHMNLVRMWGFCS--EGRHRL 533 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 533 (736)
..|.+.+.||+|+||.||++.. .+++.||||+++... ...+.+.+|+.++++++||||+++++++. +....+
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 5688999999999999999995 458899999997532 34567899999999999999999999984 455789
Q ss_pred EEEecCCCCCHhhhccc--CCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCC
Q 041821 534 LIYEYVEKQSLDKHLFS--SYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~--~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~ 595 (736)
+||||++++ |.+++.. ...+++..+..++.||++||.|||+. +..+||+|||++.......
T Consensus 85 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 163 (305)
T 2wtk_C 85 MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163 (305)
T ss_dssp EEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred EEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence 999999876 7666654 34699999999999999999999975 3378999999998776543
Q ss_pred CcceeecccccCcccChhcccCCC--CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLP--ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
.........||+.|+|||++.+.. ++.++||||||+++|||++|+.||.... ...... .+....
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---------~~~~~~----~i~~~~- 229 (305)
T 2wtk_C 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN---------IYKLFE----NIGKGS- 229 (305)
T ss_dssp SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS---------HHHHHH----HHHHCC-
T ss_pred cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch---------HHHHHH----HHhcCC-
Confidence 333345567999999999997644 4789999999999999999999987321 111111 111110
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ..+......+.+++.+||+.||++|||+.|++++
T Consensus 230 --------~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 --------Y----AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp --------C----CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --------C----CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 1112234578899999999999999999999986
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=7.7e-33 Score=303.41 Aligned_cols=258 Identities=19% Similarity=0.211 Sum_probs=167.5
Q ss_pred hhhhc-ccccCeeceeEEEEeeeC---CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEe--CCeEEEE
Q 041821 462 STKSF-KEELGRGGSGAVYKGVLA---DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE--GRHRLLI 535 (736)
Q Consensus 462 ~~~~~-~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv 535 (736)
..|++ .++||+|+||.||+|+.. +++.||||++..... ...+.+|+.+|++++||||+++++++.. ....+||
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 34555 457999999999999954 478999999975433 3457899999999999999999999965 6789999
Q ss_pred EecCCCCCHhhhcccC---------CCCCHHHHHHHHHHHHHHhhhhhcCC--------------------CccEEcccC
Q 041821 536 YEYVEKQSLDKHLFSS---------YFLGWKERFKVALGTAKGLAYLHHDE--------------------FEPKIADFG 586 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~---------~~l~~~~~~~i~~~i~~gL~yLH~~~--------------------~~~kl~DFG 586 (736)
|||+. ++|.+++... ..+++..++.|+.||+.||.|||+.+ ..+||+|||
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 177 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG 177 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence 99997 5888777521 14899999999999999999999653 368999999
Q ss_pred cccccCCCCCc-ceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHH
Q 041821 587 LAKLSQRGSNS-SQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV 664 (736)
Q Consensus 587 la~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 664 (736)
+++........ .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.....+..............+
T Consensus 178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i 257 (405)
T 3rgf_A 178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 257 (405)
T ss_dssp CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHH
T ss_pred CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHH
Confidence 99876543211 223456799999999999874 5899999999999999999999999754332110000000111111
Q ss_pred HHHHhhhcccccccc------------ccCccCCCCCH---------HHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 665 KRKILYEEEAWIEEI------------VDPRLKGKFNT---------NQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 665 ~~~~~~~~~~~~~~~------------~d~~~~~~~~~---------~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
..............+ ........... .....+.+|+.+||+.||++|||+.|+++|-
T Consensus 258 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp 335 (405)
T 3rgf_A 258 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDP 335 (405)
T ss_dssp HHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 111110000000000 00000000000 0134678999999999999999999999873
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-32 Score=298.61 Aligned_cols=248 Identities=20% Similarity=0.219 Sum_probs=174.1
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC------e
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR------H 531 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 531 (736)
..|.+.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 5688899999999999999984 458899999996532 33456889999999999999999999997765 7
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.++||||++ ++|.+.+.. .+++..+..++.||+.||.|||+.+ ..+||+|||+++......
T Consensus 105 ~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 181 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 181 (371)
T ss_dssp EEEEEECCS-EEHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC--------
T ss_pred eEEEEEcCC-CCHHHHHhh--ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccccc
Confidence 899999997 578888753 4899999999999999999999763 378999999998664332
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHH-------------
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR------------- 662 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~------------- 662 (736)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .........
T Consensus 182 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 182 ---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-----IDQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHC-CCCCCHHHHTTS
T ss_pred ---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHHHHh
Confidence 13456799999999999999999999999999999999999999974321 111111100
Q ss_pred --HHHHHHhhhc---cccccccccCccCCC---CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 663 --EVKRKILYEE---EAWIEEIVDPRLKGK---FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 663 --~~~~~~~~~~---~~~~~~~~d~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.......... ............... ........+.+|+.+||+.||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000000000 000000000000000 112336789999999999999999999999986
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-32 Score=296.20 Aligned_cols=256 Identities=18% Similarity=0.135 Sum_probs=174.8
Q ss_pred HHHHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe-----
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH----- 531 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 531 (736)
......|.+.+.||+|+||.||+|+. .+++.||||++.........+.+|++.++.++||||+++++++.....
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 98 (360)
T 3e3p_A 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD 98 (360)
T ss_dssp HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence 34556789999999999999999996 458999999986654444556788888999999999999999976433
Q ss_pred --EEEEEecCCCCCHhhh----cccCCCCCHHHHHHHHHHHHHHhhhhh--cC-----------------CCccEEcccC
Q 041821 532 --RLLIYEYVEKQSLDKH----LFSSYFLGWKERFKVALGTAKGLAYLH--HD-----------------EFEPKIADFG 586 (736)
Q Consensus 532 --~~lv~e~~~~gsL~~~----l~~~~~l~~~~~~~i~~~i~~gL~yLH--~~-----------------~~~~kl~DFG 586 (736)
.++||||+++ +|... +.....+++..+..++.|++.||.||| +. +..+||+|||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg 177 (360)
T 3e3p_A 99 IYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFG 177 (360)
T ss_dssp EEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred eeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCC
Confidence 7899999986 44433 334557899999999999999999999 54 3478999999
Q ss_pred cccccCCCCCcceeecccccCcccChhcccCCC-CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHH--
Q 041821 587 LAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVRE-- 663 (736)
Q Consensus 587 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-- 663 (736)
+++....... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||..... ......+...
T Consensus 178 ~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-----~~~~~~~~~~~~ 249 (360)
T 3e3p_A 178 SAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-----AGQLHEIVRVLG 249 (360)
T ss_dssp TCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHHHC
T ss_pred CceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-----HHHHHHHHHHcC
Confidence 9987654432 33457899999999987654 89999999999999999999999974321 1111111111
Q ss_pred -----HHHHHhhhccccccccccC------ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hhcc
Q 041821 664 -----VKRKILYEEEAWIEEIVDP------RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS--LLEC 724 (736)
Q Consensus 664 -----~~~~~~~~~~~~~~~~~d~------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~ 724 (736)
.......... .....+. ..........+..+.+|+.+||+.||++|||+.|+++| +.++
T Consensus 250 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 321 (360)
T 3e3p_A 250 CPSREVLRKLNPSHT--DVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL 321 (360)
T ss_dssp CCCHHHHHHHCTTCC--CGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGG
T ss_pred CCCHHHHHhcccchh--hccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcccccc
Confidence 0011100000 0000000 00011122245789999999999999999999999987 4444
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.8e-33 Score=293.09 Aligned_cols=236 Identities=19% Similarity=0.253 Sum_probs=180.7
Q ss_pred HHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc-cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL-HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
....|++.+.||+|+||.||+|+.. +++.||+|.+... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3467889999999999999999965 4889999999654 3456788999999999999999999999999999999999
Q ss_pred cCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 538 YVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 538 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ..+||+|||++....... ...
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~ 174 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL--QKR 174 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH--HC-
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccc--ccc
Confidence 9999999998875 457999999999999999999999763 368999999975432111 112
Q ss_pred ecccccCcccChhcc-----cCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 601 SQIRGTKGYMAPEWA-----SNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~-----~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
....||+.|+|||++ ....++.++||||||+++|||++|+.||..... ...... .....
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---------~~~~~~----~~~~~--- 238 (302)
T 2j7t_A 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP---------MRVLLK----IAKSD--- 238 (302)
T ss_dssp ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH---------HHHHHH----HHHSC---
T ss_pred ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH---------HHHHHH----HhccC---
Confidence 335689999999998 366789999999999999999999999864321 001111 11110
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
... ...+...+..+.+++.+||+.||++|||+.+++++
T Consensus 239 ~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 239 PPT-------LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp CCC-------CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred Ccc-------cCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000 01122234578899999999999999999999875
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.98 E-value=4.1e-32 Score=302.37 Aligned_cols=249 Identities=16% Similarity=0.192 Sum_probs=190.7
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCC-CceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH-MNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
..|.+.++||+|+||.||+|+. .+++.||||++..... ...+.+|+.+++.++| ++|..+..++.+.+..+|||||+
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 5688899999999999999994 5689999998754322 2347789999999986 56666777778889999999999
Q ss_pred CCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC-------------------CccEEcccCcccccCCCCCcc-
Q 041821 540 EKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE-------------------FEPKIADFGLAKLSQRGSNSS- 598 (736)
Q Consensus 540 ~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~-------------------~~~kl~DFGla~~~~~~~~~~- 598 (736)
+++|.+++.. ...+++.+++.|+.||+.||.|||+.+ ..+||+|||+++.........
T Consensus 86 -g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (483)
T 3sv0_A 86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH 164 (483)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB
T ss_pred -CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccc
Confidence 9999999975 447999999999999999999999653 368999999998776543321
Q ss_pred ----eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 599 ----QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 599 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
......||+.|+|||++.+..++.++|||||||+||||++|+.||........ . .....+........
T Consensus 165 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~----~~~~~i~~~~~~~~-- 236 (483)
T 3sv0_A 165 IPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--K----QKYEKISEKKVATS-- 236 (483)
T ss_dssp CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--H----HHHHHHHHHHHHSC--
T ss_pred cccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--H----HHHHHHhhcccccc--
Confidence 12356799999999999999999999999999999999999999975432211 1 11111111110000
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccccc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEI 730 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 730 (736)
+..+. . ..+..+.+++.+||+.||++||++.+|++.|+.+......
T Consensus 237 -~~~l~-----~----~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~ 282 (483)
T 3sv0_A 237 -IEALC-----R----GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGF 282 (483)
T ss_dssp -HHHHH-----T----TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred -HHHHh-----c----CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCC
Confidence 11110 1 1135788999999999999999999999999988665443
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.1e-33 Score=298.16 Aligned_cols=251 Identities=18% Similarity=0.201 Sum_probs=175.5
Q ss_pred HhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccc------------cHHHHHHHHHHHhcCCCCceeeEEEEEEe
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQ------------GEEVFWAEVSTIGKIYHMNLVRMWGFCSE 528 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------------~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 528 (736)
...|.+.+.||+|+||.||+|+..+++.||||++..... ..+.+.+|+.++++++||||+++++++..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 100 (362)
T 3pg1_A 21 QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVH 100 (362)
T ss_dssp TCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEE
T ss_pred ccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEe
Confidence 467888999999999999999987899999999854211 12678999999999999999999999854
Q ss_pred C-----CeEEEEEecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccC
Q 041821 529 G-----RHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFG 586 (736)
Q Consensus 529 ~-----~~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFG 586 (736)
. ...++||||++ |+|.+++.... .+++..+..++.||+.||.|||+.+ ..+||+|||
T Consensus 101 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 179 (362)
T 3pg1_A 101 FEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFN 179 (362)
T ss_dssp CCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTT
T ss_pred ccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecC
Confidence 3 36799999998 68888876544 7999999999999999999999763 368999999
Q ss_pred cccccCCCCCcceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH
Q 041821 587 LAKLSQRGSNSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK 665 (736)
Q Consensus 587 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (736)
+++....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ............
T Consensus 180 ~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~~ 251 (362)
T 3pg1_A 180 LAREDTADAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF-----YNQLNKIVEVVG 251 (362)
T ss_dssp C------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHC
T ss_pred cccccccccc---cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHcC
Confidence 9985543322 344678999999999887 6799999999999999999999999974321 111111111000
Q ss_pred H-------HHhh-hccccccccccCccCC---CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 666 R-------KILY-EEEAWIEEIVDPRLKG---KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 666 ~-------~~~~-~~~~~~~~~~d~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. .... ................ .........+.+|+.+||+.||++|||+.|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0 0000 0000000110000000 0111224578899999999999999999999986
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-32 Score=301.87 Aligned_cols=246 Identities=22% Similarity=0.233 Sum_probs=177.0
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeC------CeEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG------RHRLL 534 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~l 534 (736)
..|.+.+.||+|+||.||+|+.. +++.||||++..... ...+|+++|++++|||||++++++... ...++
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 35788899999999999999964 589999999854322 234699999999999999999998542 23679
Q ss_pred EEecCCCCCHhhhcc----cCCCCCHHHHHHHHHHHHHHhhhhhcCC-----------------CccEEcccCcccccCC
Q 041821 535 IYEYVEKQSLDKHLF----SSYFLGWKERFKVALGTAKGLAYLHHDE-----------------FEPKIADFGLAKLSQR 593 (736)
Q Consensus 535 v~e~~~~gsL~~~l~----~~~~l~~~~~~~i~~~i~~gL~yLH~~~-----------------~~~kl~DFGla~~~~~ 593 (736)
||||+++ +|.+.+. ....+++..+..++.||++||.|||+.+ ..+||+|||+++.+..
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 9999985 6665543 3457999999999999999999999752 2579999999987654
Q ss_pred CCCcceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH----HHH
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK----RKI 668 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~ 668 (736)
... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ...+..+..... ..+
T Consensus 210 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-----~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 210 GEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-----VDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp TCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHHHCSCCHHHH
T ss_pred CCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHH
Confidence 332 3345789999999998765 799999999999999999999999974321 111222211100 000
Q ss_pred hhhccccccccccCccCCC-----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 669 LYEEEAWIEEIVDPRLKGK-----FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 669 ~~~~~~~~~~~~d~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..... ...+..-+.+... ++...+..+.+|+.+||+.||++|||+.|+++|
T Consensus 282 ~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 282 REMNP-NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHCS-CCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhCh-hhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00000 0111111111110 112234678999999999999999999999976
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-32 Score=296.10 Aligned_cols=265 Identities=18% Similarity=0.214 Sum_probs=192.8
Q ss_pred HHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCC-----------CCceeeEEEEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-----------HMNLVRMWGFCS 527 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~ 527 (736)
...+|.+.+.||+|+||.||+|+. .+++.||||++.......+.+.+|+.++++++ ||||+++++++.
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 456789999999999999999995 56899999999876666677889999999886 899999999998
Q ss_pred eCC----eEEEEEecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcC-CC----------------------
Q 041821 528 EGR----HRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHD-EF---------------------- 578 (736)
Q Consensus 528 ~~~----~~~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~-~~---------------------- 578 (736)
..+ ..++||||+ +++|.+++... ..+++..+..++.||+.||.|||++ ++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcc
Confidence 654 789999999 89999998763 3699999999999999999999986 43
Q ss_pred ccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccc-hhHH
Q 041821 579 EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQ-EAEL 657 (736)
Q Consensus 579 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~-~~~~ 657 (736)
.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ....
T Consensus 176 ~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 250 (373)
T 1q8y_A 176 QIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250 (373)
T ss_dssp EEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred eEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence 4799999999876432 234568999999999999999999999999999999999999997543211100 1111
Q ss_pred HHHHHHH-------HHHHhhh-----ccccccccccC---------ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 041821 658 KRFVREV-------KRKILYE-----EEAWIEEIVDP---------RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDS 716 (736)
Q Consensus 658 ~~~~~~~-------~~~~~~~-----~~~~~~~~~d~---------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 716 (736)
..+.... ....... .......+... ......+......+.+|+.+||+.||++|||+.|
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 330 (373)
T 1q8y_A 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330 (373)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence 1111100 0000000 00000000000 0012345677889999999999999999999999
Q ss_pred HHHH--Hhcccccccc
Q 041821 717 VVQS--LLECETESEI 730 (736)
Q Consensus 717 vl~~--L~~~~~~~~~ 730 (736)
|+++ +.+.....+.
T Consensus 331 ll~hp~f~~~~~~~~~ 346 (373)
T 1q8y_A 331 LVNHPWLKDTLGMEEI 346 (373)
T ss_dssp HHTCGGGTTCTTCTTC
T ss_pred HhhChhhhcccCcccc
Confidence 9986 4444433333
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=291.56 Aligned_cols=180 Identities=21% Similarity=0.212 Sum_probs=154.8
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCC-CC-----ceeeEEEEEEeCCeEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-HM-----NLVRMWGFCSEGRHRL 533 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~~~ 533 (736)
..+|.+.+.||+|+||.||+|+.. +++.||||+++........+..|+.+++.++ |+ +|+++++++...+..+
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 467889999999999999999954 5889999999866555667788999888875 44 4999999999999999
Q ss_pred EEEecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcC--------------------CCccEEcccCccccc
Q 041821 534 LIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHD--------------------EFEPKIADFGLAKLS 591 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~--------------------~~~~kl~DFGla~~~ 591 (736)
|||||++ ++|.+++... ..+++..+..++.|++.||.|||.+ +..+||+|||+++..
T Consensus 133 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~ 211 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 211 (382)
T ss_dssp EEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred EEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence 9999996 6999998765 3699999999999999999999942 235899999999876
Q ss_pred CCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCcc
Q 041821 592 QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWV 646 (736)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~ 646 (736)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 212 ~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 212 GQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 432 33467899999999999999999999999999999999999999743
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-32 Score=293.51 Aligned_cols=243 Identities=21% Similarity=0.250 Sum_probs=164.7
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC------Ce
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG------RH 531 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 531 (736)
.+|.+.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.+|+.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 5688899999999999999984 568999999996532 3346788999999999999999999999764 56
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.++|+||+ +++|.+++.. ..+++..+..++.||++||.|||+.+ ..+||+|||+++.....
T Consensus 109 ~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~- 185 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE- 185 (367)
T ss_dssp CEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-----------
T ss_pred EEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccccc-
Confidence 79999999 6899998865 46999999999999999999999763 37899999999865432
Q ss_pred CcceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ...+..+.. ........
T Consensus 186 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~l~~i~~----~~g~p~~~ 252 (367)
T 2fst_X 186 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-----IDQLKLILR----LVGTPGAE 252 (367)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHH----HHCSCCHH
T ss_pred ----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHH----HhCCCCHH
Confidence 345679999999999887 6799999999999999999999999974321 111111111 10000000
Q ss_pred cccc--------cccCcc-CCCCCH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 675 WIEE--------IVDPRL-KGKFNT-----NQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 675 ~~~~--------~~d~~~-~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+.. .+.... ....+. .....+.+|+.+||+.||++|||+.|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000 000000 000111 123568899999999999999999999986
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-33 Score=300.27 Aligned_cols=234 Identities=11% Similarity=-0.028 Sum_probs=163.8
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHH---HHHhcCCCCceeeEE-------EEEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEV---STIGKIYHMNLVRMW-------GFCS 527 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~---~~l~~l~h~niv~l~-------~~~~ 527 (736)
+|.+.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+ .+|+. +||||++++ +++.
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEE
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhee
Confidence 477889999999999999995 468999999997633 3345577784 55555 799988755 5554
Q ss_pred eC-----------------CeEEEEEecCCCCCHhhhcccCC-CCCHHHH------HHHHHHHHHHhhhhhcC-------
Q 041821 528 EG-----------------RHRLLIYEYVEKQSLDKHLFSSY-FLGWKER------FKVALGTAKGLAYLHHD------- 576 (736)
Q Consensus 528 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~------~~i~~~i~~gL~yLH~~------- 576 (736)
.. ...+||||||+ |+|.+++.... .+.+..+ ..++.||++||+|||++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDi 220 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHF 220 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcC
Confidence 43 34799999999 99999997632 4555555 77889999999999975
Q ss_pred ---------CCccEEcccCcccccCCCCCcceeecccccCcccChhcccC--CCCccccceechhHHHHHHHhCCCCCCc
Q 041821 577 ---------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN--LPITAKVDVYSYGVVILEMVKGIRLSNW 645 (736)
Q Consensus 577 ---------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~el~tg~~p~~~ 645 (736)
+..+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 221 kp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 295 (371)
T 3q60_A 221 TPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295 (371)
T ss_dssp SGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred CHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence 337899999999866431 224567799999999987 6799999999999999999999999975
Q ss_pred cccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 646 VVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.......... . ...................+..+.+|+.+||+.||++|||+.+++++
T Consensus 296 ~~~~~~~~~~----------------~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 296 VTPGIKGSWK----------------R-PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp CCTTCTTCCC----------------B-CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred cCcccccchh----------------h-hhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 5322110000 0 00001111111111112345688999999999999999999999864
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-32 Score=297.95 Aligned_cols=247 Identities=20% Similarity=0.188 Sum_probs=177.0
Q ss_pred hhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC------eEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR------HRLLI 535 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~lv 535 (736)
.+|.+.+.||+|+||.||+|+...+..||+|++...... ..+|+++|+.++||||+++++++.... ..++|
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~---~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF---KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS---CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch---HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 468889999999999999999877777999988543221 236999999999999999999996543 37899
Q ss_pred EecCCCCCHhhhc---ccCCCCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEcccCcccccCCCC
Q 041821 536 YEYVEKQSLDKHL---FSSYFLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 536 ~e~~~~gsL~~~l---~~~~~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~~~~~~~ 595 (736)
|||++++.+.... .....+++..+..++.||++||+|||+. +..+||+|||+++......
T Consensus 117 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~ 196 (394)
T 4e7w_A 117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196 (394)
T ss_dssp EECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred eeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC
Confidence 9999865443322 2345799999999999999999999965 3468999999998765443
Q ss_pred CcceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH----HHHhh
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK----RKILY 670 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 670 (736)
. .....||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ...+..+..... ..+..
T Consensus 197 ~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-----~~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 197 P---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG-----IDQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp C---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHHHCCCCHHHHHH
T ss_pred C---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHHHh
Confidence 3 3345789999999998765 589999999999999999999999974321 111111111100 00000
Q ss_pred hccccccccccCccCC-----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 671 EEEAWIEEIVDPRLKG-----KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 671 ~~~~~~~~~~d~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.... ..+..-+.... .++...+..+.+|+.+||+.||++|||+.|+++|
T Consensus 269 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 269 MNPN-YMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCGG-GSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hChh-hhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0000 00000011110 0122234688999999999999999999999987
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-32 Score=290.99 Aligned_cols=237 Identities=22% Similarity=0.266 Sum_probs=161.4
Q ss_pred HHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHH-HHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVS-TIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
....|.+.+.||+|+||.||+|+. .+++.||||++.... .....+..|+. +++.++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 346678889999999999999996 468999999996532 33345666666 77888999999999999999999999
Q ss_pred EecCCCCCHhhhccc-----CCCCCHHHHHHHHHHHHHHhhhhhcC-C----------------CccEEcccCcccccCC
Q 041821 536 YEYVEKQSLDKHLFS-----SYFLGWKERFKVALGTAKGLAYLHHD-E----------------FEPKIADFGLAKLSQR 593 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~-----~~~l~~~~~~~i~~~i~~gL~yLH~~-~----------------~~~kl~DFGla~~~~~ 593 (736)
|||++ ++|.+++.. ...+++..+..++.|++.||.|||+. + ..+||+|||+++....
T Consensus 100 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 100 MELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp ECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred EeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 99998 488877753 45799999999999999999999975 3 3689999999987654
Q ss_pred CCCcceeecccccCcccChhcc----cCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWA----SNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
... .....||+.|+|||++ .+..++.++||||||+++|||++|+.||.......+ ...
T Consensus 179 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---------------~~~ 240 (327)
T 3aln_A 179 SIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD---------------QLT 240 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------------------C
T ss_pred ccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH---------------HHH
Confidence 322 2334699999999998 456789999999999999999999999864321100 000
Q ss_pred hhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 670 YEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 670 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ......+.+........+..+.+++.+||+.||++|||+.+|+++
T Consensus 241 ~-----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 241 Q-----VVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp C-----CCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred H-----HhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 0 111111111111112334678899999999999999999999864
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-32 Score=296.67 Aligned_cols=249 Identities=18% Similarity=0.245 Sum_probs=182.8
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC-----CeEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG-----RHRL 533 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 533 (736)
.+|.+.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+++|++++||||+++++++... ...+
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 4688899999999999999995 468899999997533 3346788999999999999999999999765 3689
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
+||||+. ++|.+++... .+++.++..++.||+.||.|||+.+ ..+||+|||+++........
T Consensus 107 iv~e~~~-~~L~~~l~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 184 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184 (364)
T ss_dssp EEEECCS-EEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB
T ss_pred EEEcccC-cCHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCc
Confidence 9999997 6999988654 5999999999999999999999763 37899999999876543221
Q ss_pred c-eeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHH-------HHH
Q 041821 598 S-QFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVK-------RKI 668 (736)
Q Consensus 598 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 668 (736)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ....+..... ...
T Consensus 185 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~~~i~~~~~~~~~~~~~~~ 259 (364)
T 3qyz_A 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-----QLNHILGILGSPSQEDLNCI 259 (364)
T ss_dssp CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-----HHHHHHHHHCSCCHHHHHTC
T ss_pred cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-----HHHHHHHHhCCCCHHHHHHh
Confidence 1 1244579999999998764 458999999999999999999999997443211 1111111000 000
Q ss_pred hhh-ccccccccccCccCCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 669 LYE-EEAWIEEIVDPRLKGKFN-----TNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 669 ~~~-~~~~~~~~~d~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
... ...+...... ....+ ......+.+|+.+||+.||++|||+.|++++
T Consensus 260 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 260 INLKARNYLLSLPH---KNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CCHHHHHHHHTSCC---CCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhHHHHHHhcCC---ccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 0000000000 00111 1224578899999999999999999999986
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-32 Score=287.11 Aligned_cols=246 Identities=24% Similarity=0.307 Sum_probs=181.0
Q ss_pred hhhhcccccCeeceeEEEEeee--CCCcEEEEEEeCcccc---cHHHHHHHHHHHhcC---CCCceeeEEEEEE-----e
Q 041821 462 STKSFKEELGRGGSGAVYKGVL--ADGRAVAVKRLGDLHQ---GEEVFWAEVSTIGKI---YHMNLVRMWGFCS-----E 528 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l---~h~niv~l~~~~~-----~ 528 (736)
..|.+.+.||+|+||.||+|+. .+++.||||++..... ....+.+|+.+++.+ +||||+++++++. .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 5688899999999999999996 4578999999864321 123466777777666 8999999999997 4
Q ss_pred CCeEEEEEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccc
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKL 590 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~ 590 (736)
....++||||++ |+|.+++.... .+++..+..++.||+.||.|||+.+ ..+||+|||+++.
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 169 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCccccc
Confidence 567899999998 69999987643 5899999999999999999999763 3689999999986
Q ss_pred cCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhh
Q 041821 591 SQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILY 670 (736)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (736)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..... .... ..+......
T Consensus 170 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~----~~i~~~~~~ 237 (326)
T 1blx_A 170 YSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-----VDQL----GKILDVIGL 237 (326)
T ss_dssp CCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHH----HHHHHHHCC
T ss_pred ccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH-----HHHH----HHHHHHcCC
Confidence 54322 23446789999999999999999999999999999999999999974321 1111 111111110
Q ss_pred -hcccccccc------cc---CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 671 -EEEAWIEEI------VD---PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 671 -~~~~~~~~~------~d---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
....+.... .. ...........+..+.+|+.+||+.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000000 00 000001122334678899999999999999999999975
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-32 Score=287.11 Aligned_cols=248 Identities=21% Similarity=0.250 Sum_probs=175.8
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEE------------
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCS------------ 527 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~------------ 527 (736)
.+|.+.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 56788899999999999999965 48999999986543 44567899999999999999999999873
Q ss_pred --eCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC-----------------CccEEcccCcc
Q 041821 528 --EGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE-----------------FEPKIADFGLA 588 (736)
Q Consensus 528 --~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-----------------~~~kl~DFGla 588 (736)
+....++||||++ |+|.+++.. ..+++..+..++.|+++||+|||+.+ ..+||+|||++
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~ 168 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred ccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccc
Confidence 4467899999998 699999865 46899999999999999999999753 36899999999
Q ss_pred cccCCCCCc-ceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHH--
Q 041821 589 KLSQRGSNS-SQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV-- 664 (736)
Q Consensus 589 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-- 664 (736)
+........ .......+|..|+|||.+.+ ..++.++||||||+++|||++|+.||..... ......+....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~ 243 (320)
T 2i6l_A 169 RIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE-----LEQMQLILESIPV 243 (320)
T ss_dssp BCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHHSCC
T ss_pred cccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHhcCC
Confidence 876533211 12344567999999998865 6799999999999999999999999974321 11111111100
Q ss_pred -----HHHHhhhccccccccccCccC-CCC-----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 665 -----KRKILYEEEAWIEEIVDPRLK-GKF-----NTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 665 -----~~~~~~~~~~~~~~~~d~~~~-~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
....... +...+..... ... ....+..+.+++.+||+.||++|||+.|++++
T Consensus 244 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 244 VHEEDRQELLSV----IPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CCHHHHHHHHTT----SCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred Cchhhhhhhhhc----CcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0000000 0000000000 000 11234678999999999999999999999875
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-32 Score=290.71 Aligned_cols=235 Identities=18% Similarity=0.175 Sum_probs=156.6
Q ss_pred Hhhhhccc-ccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEe----CCeEEE
Q 041821 461 KSTKSFKE-ELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE----GRHRLL 534 (736)
Q Consensus 461 ~~~~~~~~-~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 534 (736)
...|.+.+ .||+|+||.||+|+.. +++.||||++.......+ .....++.+.||||+++++++.. ....++
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 103 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ---EVDHHWQASGGPHIVCILDVYENMHHGKRCLLI 103 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCceEEE
Confidence 35677754 6999999999999965 589999999965433222 22334566799999999999976 455899
Q ss_pred EEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC-------------------CccEEcccCcccccCC
Q 041821 535 IYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE-------------------FEPKIADFGLAKLSQR 593 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~-------------------~~~kl~DFGla~~~~~ 593 (736)
||||+++|+|.+++.... .+++.++..++.||+.||.|||+.+ ..+||+|||+++....
T Consensus 104 v~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 104 IMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp EEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 999999999999998654 6999999999999999999999763 2489999999986643
Q ss_pred CCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
.. .....||+.|+|||++.+..++.++||||||+++|||++|+.||........ ...........
T Consensus 184 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---------~~~~~~~~~~~-- 248 (336)
T 3fhr_A 184 NA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI---------SPGMKRRIRLG-- 248 (336)
T ss_dssp ------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------------
T ss_pred cc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh---------hhhHHHhhhcc--
Confidence 22 3345789999999999888899999999999999999999999964322110 00000000000
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
............+..+.+|+.+||+.||++|||+.|++++
T Consensus 249 -------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 249 -------QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ---------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred -------ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000111112334678899999999999999999999985
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-32 Score=289.12 Aligned_cols=241 Identities=20% Similarity=0.252 Sum_probs=178.3
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe------
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH------ 531 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 531 (736)
.+|.+.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.++++++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 4678889999999999999995 458999999996533 234668899999999999999999999987654
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.++||||+. ++|.+++.. .+++..+..++.||+.||.|||+.+ ..+||+|||+++.....
T Consensus 104 ~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~- 179 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE- 179 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-----
T ss_pred EEEEecccc-CCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCC-
Confidence 499999997 689888754 4899999999999999999999763 37899999999865432
Q ss_pred CcceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ........ .........
T Consensus 180 ----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~i~----~~~~~~~~~ 246 (353)
T 3coi_A 180 ----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-----LDQLTQIL----KVTGVPGTE 246 (353)
T ss_dssp --------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH-----HHHHHHHH----HHHCBCCHH
T ss_pred ----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHH----HHhCCCCHH
Confidence 334578999999999887 6789999999999999999999999974321 11111111 100000000
Q ss_pred c------------c---cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 675 W------------I---EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 675 ~------------~---~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+ + .....+.+ .......+..+.+++.+||+.||++|||+.+++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 247 FVQKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHTTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0 0 00000011 11122345688999999999999999999999986
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-32 Score=293.39 Aligned_cols=242 Identities=19% Similarity=0.255 Sum_probs=177.8
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE-----
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR----- 532 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 532 (736)
.+|.+.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 4678889999999999999995 458999999997533 2346788999999999999999999999887655
Q ss_pred -EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 533 -LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 533 -~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
++||||+. ++|.+++.. .+++..+..++.||+.||.|||+.+ ..+||+|||+++.....
T Consensus 122 ~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~- 197 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE- 197 (371)
T ss_dssp CEEEEECCC-EEHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC-------
T ss_pred EEEEEcccc-ccHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccC-
Confidence 99999997 789888743 4999999999999999999999763 36899999999865432
Q ss_pred CcceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......... ........
T Consensus 198 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~----~~~~~~~~ 264 (371)
T 4exu_A 198 ----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-----LDQLTQILK----VTGVPGTE 264 (371)
T ss_dssp ------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHH----HHCCCCHH
T ss_pred ----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHH----HhCCCcHH
Confidence 344678999999999987 6799999999999999999999999974321 111111111 00000000
Q ss_pred ccc-----------ccccCccCCC---CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 675 WIE-----------EIVDPRLKGK---FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 675 ~~~-----------~~~d~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+.. ..+....... ........+.+|+.+||+.||++|||+.|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 265 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000 0000000000 011224678999999999999999999999987
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=285.48 Aligned_cols=252 Identities=19% Similarity=0.256 Sum_probs=186.6
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC-CC-cEEEEEEeCcccccHHHHHHHHHHHhcCCCCc------eeeEEEEEEeC
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA-DG-RAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMN------LVRMWGFCSEG 529 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~ 529 (736)
++...+|.+.+.||+|+||.||+|+.. ++ +.||||+++......+.+.+|+.++++++|++ ++.+++++...
T Consensus 15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred ceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 334578899999999999999999953 34 68999999876666677889999999997766 99999999999
Q ss_pred CeEEEEEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcCC------------------------------
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHDE------------------------------ 577 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~~------------------------------ 577 (736)
+..+|||||+ +++|.+++.... .+++.++..++.||+.||.|||+.+
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~ 173 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEE 173 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred CeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccc
Confidence 9999999999 567777766543 6999999999999999999999752
Q ss_pred -----CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCcc
Q 041821 578 -----FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEG 652 (736)
Q Consensus 578 -----~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~ 652 (736)
..+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 174 ~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--- 245 (355)
T 2eu9_A 174 KSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR--- 245 (355)
T ss_dssp EEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---
T ss_pred cccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH---
Confidence 34799999999865432 23457999999999999999999999999999999999999999743211
Q ss_pred chhHHHHHHH-------HHHHHHhhhcc------cc---------ccccccC-ccCCCCCHHHHHHHHHHHHHcccCCCC
Q 041821 653 QEAELKRFVR-------EVKRKILYEEE------AW---------IEEIVDP-RLKGKFNTNQAATLIGIGISCVDEDRS 709 (736)
Q Consensus 653 ~~~~~~~~~~-------~~~~~~~~~~~------~~---------~~~~~d~-~~~~~~~~~~~~~l~~li~~cl~~dP~ 709 (736)
.....+.. ........... .+ ..+...+ .............+.+|+.+||+.||+
T Consensus 246 --~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 323 (355)
T 2eu9_A 246 --EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323 (355)
T ss_dssp --HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred --HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChh
Confidence 11111100 00000000000 00 0000000 000112334567899999999999999
Q ss_pred CCCCHHHHHHH
Q 041821 710 KRPTMDSVVQS 720 (736)
Q Consensus 710 ~RPs~~evl~~ 720 (736)
+|||+.|++++
T Consensus 324 ~Rpt~~e~l~h 334 (355)
T 2eu9_A 324 QRITLAEALLH 334 (355)
T ss_dssp TSCCHHHHTTS
T ss_pred hCcCHHHHhcC
Confidence 99999999975
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-32 Score=289.26 Aligned_cols=228 Identities=22% Similarity=0.281 Sum_probs=175.8
Q ss_pred HHHHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccc-------cHHHHHHHHHHHhcC----CCCceeeEEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQ-------GEEVFWAEVSTIGKI----YHMNLVRMWGF 525 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-------~~~~~~~E~~~l~~l----~h~niv~l~~~ 525 (736)
+.....|.+.+.||+|+||.||+|+. .+++.||||++..... ....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 44567899999999999999999985 5688999999965432 123356799999888 89999999999
Q ss_pred EEeCCeEEEEEec-CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEcccCc
Q 041821 526 CSEGRHRLLIYEY-VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADFGL 587 (736)
Q Consensus 526 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DFGl 587 (736)
+...+..++|||| +.+++|.+++.....+++..+..++.||++||.|||+. +..+||+|||+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~ 186 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGS 186 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcch
Confidence 9999999999999 78999999998877899999999999999999999954 34689999999
Q ss_pred ccccCCCCCcceeecccccCcccChhcccCCCC-ccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHH
Q 041821 588 AKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPI-TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR 666 (736)
Q Consensus 588 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 666 (736)
++...... .....||..|+|||++.+..+ +.++||||||+++|||++|+.||.... ..
T Consensus 187 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---------------~~-- 245 (312)
T 2iwi_A 187 GALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ---------------EI-- 245 (312)
T ss_dssp CEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---------------HH--
T ss_pred hhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH---------------HH--
Confidence 98765432 344569999999999887665 559999999999999999999986220 00
Q ss_pred HHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 041821 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721 (736)
Q Consensus 667 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 721 (736)
.... ...+......+.+++.+||+.||++|||+.|++++-
T Consensus 246 --~~~~-------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~ 285 (312)
T 2iwi_A 246 --LEAE-------------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDP 285 (312)
T ss_dssp --HHTC-------------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHST
T ss_pred --hhhc-------------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0000 011222345788999999999999999999999863
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=9.4e-33 Score=292.78 Aligned_cols=227 Identities=22% Similarity=0.272 Sum_probs=183.2
Q ss_pred HHHHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccc-------cHHHHHHHHHHHhcCC--CCceeeEEEEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQ-------GEEVFWAEVSTIGKIY--HMNLVRMWGFCS 527 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-------~~~~~~~E~~~l~~l~--h~niv~l~~~~~ 527 (736)
+....+|.+.+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|+.++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 34456788999999999999999984 5689999999965321 2244678999999996 599999999999
Q ss_pred eCCeEEEEEecCCC-CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEcccCccc
Q 041821 528 EGRHRLLIYEYVEK-QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADFGLAK 589 (736)
Q Consensus 528 ~~~~~~lv~e~~~~-gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~ 589 (736)
+.+..++|||++.+ ++|.+++.....+++..+..++.||++||.|||+. +..+||+|||+++
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 99999999999986 89999998877899999999999999999999965 3478999999998
Q ss_pred ccCCCCCcceeecccccCcccChhcccCCCC-ccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHH
Q 041821 590 LSQRGSNSSQFSQIRGTKGYMAPEWASNLPI-TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKI 668 (736)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (736)
...... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... ..
T Consensus 199 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~---------------~~---- 255 (320)
T 3a99_A 199 LLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------EI---- 255 (320)
T ss_dssp ECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---------------HH----
T ss_pred cccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh---------------hh----
Confidence 765432 334569999999999887665 789999999999999999999986321 00
Q ss_pred hhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 669 LYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 669 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
... ... . +...+..+.+++.+||+.||++|||+.+|+++
T Consensus 256 ~~~-----~~~----~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 256 IRG-----QVF----F----RQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp HHC-----CCC----C----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hcc-----ccc----c----cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 000 1 11123578899999999999999999999985
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-32 Score=289.52 Aligned_cols=248 Identities=18% Similarity=0.196 Sum_probs=180.1
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC-----CeEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG-----RHRL 533 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 533 (736)
..|.+.+.||+|+||.||+|+.. +++.||||++.... .....+.+|+.++++++||||+++++++... ...+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 56788899999999999999954 58999999996533 3345688999999999999999999998764 6789
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~ 597 (736)
+||||+. ++|.+++.. ..+++..+..++.|++.||.|||+. +..+||+|||+++........
T Consensus 91 lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 168 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168 (353)
T ss_dssp EEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred EEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccccccccc
Confidence 9999997 699998876 4699999999999999999999975 337899999999876543221
Q ss_pred c--------eeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHH
Q 041821 598 S--------QFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKI 668 (736)
Q Consensus 598 ~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (736)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ....... ....
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~----~~~~ 239 (353)
T 2b9h_A 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY-----RHQLLLI----FGII 239 (353)
T ss_dssp -----------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHH----HHHH
T ss_pred ccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc-----HHHHHHH----HHHh
Confidence 1 1223578999999998764 6799999999999999999999999974321 0111111 0000
Q ss_pred hhhc-cccc--------cccccCcc-CCCC-----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 669 LYEE-EAWI--------EEIVDPRL-KGKF-----NTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 669 ~~~~-~~~~--------~~~~d~~~-~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.... .... .+.+.... .... ....+..+.+|+.+||+.||++|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 0000 00000000 0000 11234578899999999999999999999986
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.5e-32 Score=296.37 Aligned_cols=233 Identities=24% Similarity=0.249 Sum_probs=170.6
Q ss_pred hhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
.+|.+.+.||+|+||+|+.....+++.||||++...... .+.+|+++|+++ +|||||++++++.+....+||||||.
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~--~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS--FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE--ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH--HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 346777899999999966555557899999999653321 245799999999 79999999999999999999999996
Q ss_pred CCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC---------------------ccEEcccCcccccCCCCCc-
Q 041821 541 KQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF---------------------EPKIADFGLAKLSQRGSNS- 597 (736)
Q Consensus 541 ~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~---------------------~~kl~DFGla~~~~~~~~~- 597 (736)
|+|.+++.... .+.+..+..++.||++||.|||+.++ .+||+|||+++........
T Consensus 102 -g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~ 180 (432)
T 3p23_A 102 -ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF 180 (432)
T ss_dssp -EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-------
T ss_pred -CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcce
Confidence 69999997654 45566778999999999999997632 4679999999877543321
Q ss_pred ceeecccccCcccChhccc---CCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 598 SQFSQIRGTKGYMAPEWAS---NLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
.......||+.|+|||++. ...++.++|||||||++|||++ |..||...... .. . ..
T Consensus 181 ~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~------~~----~----~~----- 241 (432)
T 3p23_A 181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR------QA----N----IL----- 241 (432)
T ss_dssp -----CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH------HH----H----HH-----
T ss_pred eeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH------HH----H----HH-----
Confidence 1234567999999999997 4567889999999999999999 88888532110 00 0 00
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
........ ..........+.+|+.+||+.||++|||+.+|++|
T Consensus 242 --~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 242 --LGACSLDC--LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp --TTCCCCTT--SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --hccCCccc--cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 00000000 11123445668899999999999999999999954
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=295.66 Aligned_cols=233 Identities=24% Similarity=0.246 Sum_probs=170.8
Q ss_pred hhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEEEecCCCC
Q 041821 464 KSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g 542 (736)
+...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.+|+++ +|||||++++++.+++..+||||||. |
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence 3345789999999998776667999999998543 345678999999876 89999999999999999999999996 7
Q ss_pred CHhhhcccCCCC-------CHHHHHHHHHHHHHHhhhhhcCC-----------------------------CccEEcccC
Q 041821 543 SLDKHLFSSYFL-------GWKERFKVALGTAKGLAYLHHDE-----------------------------FEPKIADFG 586 (736)
Q Consensus 543 sL~~~l~~~~~l-------~~~~~~~i~~~i~~gL~yLH~~~-----------------------------~~~kl~DFG 586 (736)
+|.+++...... ++..+..++.||+.||+|||+.+ ..+||+|||
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG 173 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence 999999765422 23345789999999999999652 258999999
Q ss_pred cccccCCCCCcc--eeecccccCcccChhcccC-------CCCccccceechhHHHHHHHh-CCCCCCccccCCccchhH
Q 041821 587 LAKLSQRGSNSS--QFSQIRGTKGYMAPEWASN-------LPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAE 656 (736)
Q Consensus 587 la~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~ 656 (736)
+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||......
T Consensus 174 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~------- 246 (434)
T 2rio_A 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR------- 246 (434)
T ss_dssp TCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH-------
T ss_pred cceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh-------
Confidence 999876543221 1334679999999999975 568999999999999999999 89998632110
Q ss_pred HHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 657 LKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.. .+. .+ ... .+......+...+..+.+++.+||+.||++|||+.+|++|
T Consensus 247 ~~----~i~----~~----~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 247 ES----NII----RG----IFS--LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp HH----HHH----HT----CCC--CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HH----HHh----cC----CCC--cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 00 000 00 000 0111222345667889999999999999999999999874
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-31 Score=280.33 Aligned_cols=234 Identities=20% Similarity=0.262 Sum_probs=161.0
Q ss_pred HhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccc--c-HHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQ--G-EEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
...|.+.+.||+|+||.||+|+.. +++.||||++..... . .+.+..+..+++.++||||+++++++.+++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 356788899999999999999964 689999999965432 2 233445556788899999999999999999999999
Q ss_pred ecCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEcccCcccccCCCCCcc
Q 041821 537 EYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 537 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~~~~~~~~~~ 598 (736)
||+ ++.+..+... ...+++..+..++.|+++||.|||++ +..+||+|||+++.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-- 180 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA-- 180 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc--
Confidence 999 4555555543 45799999999999999999999963 33789999999976654322
Q ss_pred eeecccccCcccChhccc-----CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 599 QFSQIRGTKGYMAPEWAS-----NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
.....||+.|+|||++. ...++.++||||||+++|||++|+.||...... ....... ....
T Consensus 181 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~----~~~~- 246 (318)
T 2dyl_A 181 -KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD--------FEVLTKV----LQEE- 246 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH--------HHHHHHH----HHSC-
T ss_pred -ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc--------HHHHHHH----hccC-
Confidence 33456999999999984 456889999999999999999999998632110 0111111 1110
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+.+. .....+..+.+++.+||+.||.+|||+.+|+++
T Consensus 247 -------~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 247 -------PPLLP--GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp -------CCCCC--SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred -------CCCCC--ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00000 011223578899999999999999999999875
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-31 Score=301.06 Aligned_cols=252 Identities=23% Similarity=0.236 Sum_probs=184.8
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEe------CCe
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE------GRH 531 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 531 (736)
..+|.+.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|+.++++++||||+++++++.. ++.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 36799999999999999999995 45899999998653 2345678999999999999999999998765 677
Q ss_pred EEEEEecCCCCCHhhhcccCC---CCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCccc
Q 041821 532 RLLIYEYVEKQSLDKHLFSSY---FLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAK 589 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~---~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~ 589 (736)
.++||||+++|+|.+++.... .+++..+..++.|++.||.|||+.++ .+||+|||+++
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~ 172 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccc
Confidence 899999999999999997644 68999999999999999999997632 37999999998
Q ss_pred ccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHH-HHHHHHHHHH
Q 041821 590 LSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELK-RFVREVKRKI 668 (736)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~ 668 (736)
....... .....||+.|+|||++.+..++.++||||||+++|||++|..||....... ... ..........
T Consensus 173 ~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~-----~~~~~i~~~~~~~~ 244 (676)
T 3qa8_A 173 ELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV-----QWHGKVREKSNEHI 244 (676)
T ss_dssp BTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH-----HSSTTCC------C
T ss_pred ccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh-----hhhhhhhcccchhh
Confidence 7755432 344679999999999999999999999999999999999999996431100 000 0000000000
Q ss_pred hhhccccccccccC--------ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHH-----HHHHhcccc
Q 041821 669 LYEEEAWIEEIVDP--------RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSV-----VQSLLECET 726 (736)
Q Consensus 669 ~~~~~~~~~~~~d~--------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev-----l~~L~~~~~ 726 (736)
. ..+.... ..........+..+.+++.+||+.||++|||+.++ .+.++.+..
T Consensus 245 ~------~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 245 V------VYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp C------SCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred h------hhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 0 0000000 01122345567889999999999999999999874 455555443
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-31 Score=308.58 Aligned_cols=226 Identities=22% Similarity=0.293 Sum_probs=178.4
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC--CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCe--
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA--DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRH-- 531 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-- 531 (736)
++...+|.+.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.+|++++||||+++++++...+.
T Consensus 76 ~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 155 (681)
T 2pzi_A 76 DIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG 155 (681)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred CEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence 344578899999999999999999964 58999999986532 344678899999999999999999999987655
Q ss_pred ---EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC---------------ccEEcccCcccccCC
Q 041821 532 ---RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF---------------EPKIADFGLAKLSQR 593 (736)
Q Consensus 532 ---~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------~~kl~DFGla~~~~~ 593 (736)
.+|||||+++++|.+++.. .+++.+++.++.||++||.|||+.++ .+||+|||+++....
T Consensus 156 ~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 156 DPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINS 233 (681)
T ss_dssp CEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSCEEECCCTTCEETTC
T ss_pred CceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCCcEEEEecccchhccc
Confidence 7999999999999988765 69999999999999999999997632 689999999987654
Q ss_pred CCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
. ....||+.|+|||++.+.. +.++|||||||++|||++|.+|+........
T Consensus 234 ~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~---------------------- 284 (681)
T 2pzi_A 234 F------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL---------------------- 284 (681)
T ss_dssp C------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------------------
T ss_pred C------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc----------------------
Confidence 3 3456999999999987654 8999999999999999999888763221110
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhcc
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-TMDSVVQSLLEC 724 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~ 724 (736)
. ...........+.+++.+||+.||++|| +++++.+.|.++
T Consensus 285 ------~----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 285 ------P----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp ------C----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ------c----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 0 0001112335788999999999999999 466666666654
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=262.29 Aligned_cols=224 Identities=10% Similarity=0.034 Sum_probs=171.1
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccc----cHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQ----GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
+...+|.+.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 107 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL 107 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence 44567899999999999999999964 489999999975432 2367899999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC--------ccEEcccCcccccCCCCCcceeecccc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF--------EPKIADFGLAKLSQRGSNSSQFSQIRG 605 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~--------~~kl~DFGla~~~~~~~~~~~~~~~~g 605 (736)
+||||+++++|.+++... ....++..++.|++.||.|||++++ ++.|.+.|..++ +
T Consensus 108 lv~e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl--------------~ 171 (286)
T 3uqc_A 108 VVAEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVL--------------A 171 (286)
T ss_dssp EEEECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEE--------------C
T ss_pred EEEEecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEE--------------E
Confidence 999999999999999653 4666789999999999999998754 344555444332 3
Q ss_pred cCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccC
Q 041821 606 TKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685 (736)
Q Consensus 606 t~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 685 (736)
+..|++| ++.++|||||||++|||++|+.||........-.. ....+.....
T Consensus 172 ~~~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~---------------------~~~~~~~~~~ 223 (286)
T 3uqc_A 172 YPATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP---------------------AERDTAGQPI 223 (286)
T ss_dssp SCCCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE---------------------CCBCTTSCBC
T ss_pred eccccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH---------------------HHHHhccCCC
Confidence 5567765 78999999999999999999999975432211000 0000010000
Q ss_pred --CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 686 --GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 686 --~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
.......+..+.+++.+||+.||++| |+.|+++.|+.+...
T Consensus 224 ~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 224 EPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp CHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred ChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 00111234578999999999999999 999999999987543
|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-29 Score=250.40 Aligned_cols=189 Identities=19% Similarity=0.282 Sum_probs=131.6
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCC-CcceEEE
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTST-GADRAEL 79 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~-~~~~a~L 79 (736)
|.|+|||+.+++ . ++|.. +|+||+|||+.| .++.|+|..+|+|||.|++|.+||++++... ....|+|
T Consensus 26 g~f~l~f~~~gn--l---~ly~~---~~~vW~an~~~~---~~~~l~l~~dGnLvl~d~~~~~vW~s~~~~~~~~~~~~l 94 (236)
T 1dlp_A 26 SSFRFTMQSDCN--L---VLFDS---DVRVWASNTAGA---TGCRAVLQSDGLLVILTAQNTIRWSSGTKGSIGNYVLVL 94 (236)
T ss_dssp TTEEEEECTTSC--E---EEEES---SSEEECCCCCSC---SCCBCCBCSSSCBCCBCTTTCCSCCCCCCCCSSCCEEEE
T ss_pred CCEEEEECCCCc--E---EEEEC---CEEEEECCCCCC---CCeEEEEcCCCcEEEEcCCCcEEEeCCccccCCcEEEEE
Confidence 689999986442 2 24543 799999999988 5689999999999999999999999998643 3457999
Q ss_pred ccCCCeEEEccCCceeeeecCCCCCcc----------CCCcccCCC-ceEEecCCCCCCCCCcceEEEcCCCceEEEecC
Q 041821 80 LDTGNLVLKDRHGKILWQSFDYPTDTL----------LPNQVFRKS-TKLISGVGNGTYASGYFSLYFDNDNVLRLIYDG 148 (736)
Q Consensus 80 ldsGNlVl~~~~~~~lWqSFd~PTDTl----------Lpg~~l~~~-~~L~S~~s~~d~s~G~~~l~~~~~g~~~~~~~~ 148 (736)
+|+|||||++. ++||||||||||+ +|||+++.+ +.|++ .+||++|.|+|.++++|.+.++ .+
T Consensus 95 ~d~Gnlvl~~~---~~W~S~~~p~~t~~lp~~g~d~L~~gq~~~~~~~~L~s---~~d~s~G~~~l~l~~dG~LvL~-~~ 167 (236)
T 1dlp_A 95 QPDRTVTIYGP---GLWDSGTSNKGSVVVANNGNSILYSTQGNDNHPQTLHA---TQSLQLSPYRLSMETDCNLVLF-DR 167 (236)
T ss_dssp CSSSCEEEECS---EEEECSCCCSSCCCCSSCCCEECCCC--CCCCCCEECS---SCCCBCSSCEEEEETTTEEEEE-BT
T ss_pred eCCCCEEEecC---CEEECCCCCCcccccCCccceEEecCCcCCCccceEEc---CcEeecCcEEEEECCCCcEEEE-cC
Confidence 99999999954 8999999998665 666665543 46764 7899999999999999976554 33
Q ss_pred CCccceecCCCCCCccccCcccccccceEeecCCCcc---ccCCceEEEEeecCCceEEEEEEccCccEEEEE
Q 041821 149 PEISSVYWPDPDFDVFQNGRTKYNSSRIAVLDDFGSF---SSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYS 218 (736)
Q Consensus 149 ~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~rl~l~~~G~l~~~~ 218 (736)
. ..||+++..+...... ..+...+.+ ....+..+..........+|++|++||++++|.
T Consensus 168 ~---~~~W~s~~~~~~~~~~--------~~L~~~Gnl~ly~~~~~~vw~s~~~~~~~~~rl~Ld~dG~l~ly~ 229 (236)
T 1dlp_A 168 D---DRVWSTNTAGKGTGCR--------AVLQPNGRMDVLTNQNIAVWTSGNSRSAGRYVFVLQPDRNLAIYG 229 (236)
T ss_dssp T---BCCSCCCCCSSCSSCE--------EEEETTTEEEEEETTTEEEEECCCCCSSSCCEEEECSSSCEEEEC
T ss_pred C---EeEEeCCCcCCCCceE--------EEECCCCcEEEEeCCCcEEEEeCCCCCCCCEEEEEcCCCcEEEeC
Confidence 2 4799877532211111 122222221 111222222211122245799999999999994
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=258.80 Aligned_cols=209 Identities=17% Similarity=0.140 Sum_probs=160.2
Q ss_pred hhhhcc-cccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHH-hcCCCCceeeEEEEEEe----CCeEEE
Q 041821 462 STKSFK-EELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTI-GKIYHMNLVRMWGFCSE----GRHRLL 534 (736)
Q Consensus 462 ~~~~~~-~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~~l 534 (736)
..|.+. +.||+|+||.||+++. .+++.||||+++.. ..+.+|+.++ +.++||||+++++++.. ....++
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 92 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 92 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence 345555 6799999999999995 56899999999542 3466788887 66699999999999987 677899
Q ss_pred EEecCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcC-------------------CCccEEcccCcccccCC
Q 041821 535 IYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHD-------------------EFEPKIADFGLAKLSQR 593 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~-------------------~~~~kl~DFGla~~~~~ 593 (736)
||||+++++|.+++.... .+++..+..++.|++.||.|||+. +..+||+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~- 171 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT- 171 (299)
T ss_dssp EECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc-
Confidence 999999999999997654 699999999999999999999965 3468999999986432
Q ss_pred CCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
+..++.++|||||||++|||++|+.||........ ....
T Consensus 172 -----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----------------~~~~- 210 (299)
T 3m2w_A 172 -----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------------SPGM- 210 (299)
T ss_dssp -----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------------CCS-
T ss_pred -----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----------------hHHH-
Confidence 23478899999999999999999999964321100 0000
Q ss_pred ccccccccCccCCCCCH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNT----NQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+.... ...+. ..+..+.+++.+||+.||++|||+.|++++
T Consensus 211 --~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 211 --KTRIRMGQ--YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp --CCSSCTTC--CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --HHHHhhcc--ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00000000 11121 234678999999999999999999999986
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-28 Score=269.51 Aligned_cols=220 Identities=15% Similarity=0.083 Sum_probs=159.3
Q ss_pred hhcccccCeeceeEEEEee-eCCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCC-Cce---------e------e-
Q 041821 464 KSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYH-MNL---------V------R- 521 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h-~ni---------v------~- 521 (736)
+.+.+.||+|+||.||+|+ ..+++.||||++.... ...+.+.+|+.+++.++| +|. + .
T Consensus 80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
T 3dzo_A 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 159 (413)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence 4566789999999999999 5568999999997322 234678999999999987 221 1 1
Q ss_pred -----EEEEEEe-----CCeEEEEEecCCCCCHhhhcc------c-CCCCCHHHHHHHHHHHHHHhhhhhcC--------
Q 041821 522 -----MWGFCSE-----GRHRLLIYEYVEKQSLDKHLF------S-SYFLGWKERFKVALGTAKGLAYLHHD-------- 576 (736)
Q Consensus 522 -----l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~------~-~~~l~~~~~~~i~~~i~~gL~yLH~~-------- 576 (736)
+..+... ....+++|+++ +++|.+++. . ...+++..++.++.||++||+|||+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiK 238 (413)
T 3dzo_A 160 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLR 238 (413)
T ss_dssp CC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred CCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcc
Confidence 1111111 12356777765 689998884 1 22578889999999999999999975
Q ss_pred --------CCccEEcccCcccccCCCCCcceeecccccCcccChhcc----------cCCCCccccceechhHHHHHHHh
Q 041821 577 --------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA----------SNLPITAKVDVYSYGVVILEMVK 638 (736)
Q Consensus 577 --------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwS~Gvvl~el~t 638 (736)
+..+||+|||+++..... .....| +.|||||++ .+..++.++|||||||++|||++
T Consensus 239 p~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt 312 (413)
T 3dzo_A 239 PVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC 312 (413)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH
T ss_pred cceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHH
Confidence 336899999999865432 345567 999999999 55568899999999999999999
Q ss_pred CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 041821 639 GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVV 718 (736)
Q Consensus 639 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 718 (736)
|+.||........ ...++... ... +..+.+|+.+||+.||++|||+.+++
T Consensus 313 g~~Pf~~~~~~~~------------------------~~~~~~~~--~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 313 ADLPNTDDAALGG------------------------SEWIFRSC--KNI----PQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp SSCCCCTTGGGSC------------------------SGGGGSSC--CCC----CHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred CCCCCCCcchhhh------------------------HHHHHhhc--ccC----CHHHHHHHHHHccCChhhCcCHHHHH
Confidence 9999974322111 11111111 112 35788999999999999999988876
Q ss_pred HH
Q 041821 719 QS 720 (736)
Q Consensus 719 ~~ 720 (736)
++
T Consensus 363 ~~ 364 (413)
T 3dzo_A 363 ET 364 (413)
T ss_dssp TS
T ss_pred hC
Confidence 53
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-29 Score=265.79 Aligned_cols=229 Identities=12% Similarity=0.081 Sum_probs=170.4
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc---------ccHHHHHHHHHHHhcCC---------CCcee
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH---------QGEEVFWAEVSTIGKIY---------HMNLV 520 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~---------h~niv 520 (736)
+...+|.+.+.||+|+||+||+|+. +++.||||++.... ...+.+.+|+.+|+.++ |||||
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv 95 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI 95 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred cccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence 4467899999999999999999998 68999999996432 22367889999988885 88888
Q ss_pred eEEEEEE------------------------------eCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHh
Q 041821 521 RMWGFCS------------------------------EGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGL 570 (736)
Q Consensus 521 ~l~~~~~------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL 570 (736)
++++.+. +.+..+||||||++|++.+.+.+ ..+++..++.++.||+.||
T Consensus 96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHH
T ss_pred hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHH
Confidence 8777643 26789999999999977776644 5689999999999999999
Q ss_pred hhhh-cC----------------CC--------------------ccEEcccCcccccCCCCCcceeecccccCcccChh
Q 041821 571 AYLH-HD----------------EF--------------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE 613 (736)
Q Consensus 571 ~yLH-~~----------------~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE 613 (736)
.||| +. +. .+||+|||+|+..... ..+||+.|||||
T Consensus 175 ~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~aPE 247 (336)
T 2vuw_A 175 AVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMDED 247 (336)
T ss_dssp HHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTCSG
T ss_pred HHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccChh
Confidence 9999 53 22 7899999999876432 347999999999
Q ss_pred cccCCCCccccceechhHH-HHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHH
Q 041821 614 WASNLPITAKVDVYSYGVV-ILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQ 692 (736)
Q Consensus 614 ~~~~~~~~~~~DvwS~Gvv-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 692 (736)
++.+.. +.++||||++++ .+++++|..||... .+........... ...............
T Consensus 248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~------------~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 308 (336)
T 2vuw_A 248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV------------LWLHYLTDKMLKQ------MTFKTKCNTPAMKQI 308 (336)
T ss_dssp GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH------------HHHHHHHHHHHHT------CCCSSCCCSHHHHHH
T ss_pred hhcCCC-ccceehhhhhCCCCcccccccCCCcch------------hhhhHHHHhhhhh------hccCcccchhhhhhc
Confidence 998776 899999998777 77888898887411 0001111111100 000111111123456
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHH-HH
Q 041821 693 AATLIGIGISCVDEDRSKRPTMDSVV-QS 720 (736)
Q Consensus 693 ~~~l~~li~~cl~~dP~~RPs~~evl-~~ 720 (736)
+..+.+|+.+||+.| |+.|++ +|
T Consensus 309 s~~~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 309 KRKIQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHHHHHGGGSS-----SHHHHHHHC
T ss_pred CHHHHHHHHHHhccC-----CHHHHHhcC
Confidence 788999999999976 999998 64
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.6e-23 Score=233.36 Aligned_cols=171 Identities=11% Similarity=-0.000 Sum_probs=117.6
Q ss_pred ccccCeeceeEEEEee-eCCCcEEEEEEeCcc-----------cccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEE
Q 041821 467 KEELGRGGSGAVYKGV-LADGRAVAVKRLGDL-----------HQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~-----------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 533 (736)
...++.|++|.+..++ ..-|+.+|||.+.+. ....++|.+|+++|+++ .|+||++++++++++...|
T Consensus 239 ~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~y 318 (569)
T 4azs_A 239 QNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGW 318 (569)
T ss_dssp ECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEE
T ss_pred hhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEE
Confidence 3457788888877776 445899999999542 12235699999999999 6999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
|||||++|++|.++|.+.++++.. +|+.||+.||+|||+++ ..+||+|||+|+.......
T Consensus 319 LVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~- 394 (569)
T 4azs_A 319 LVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS- 394 (569)
T ss_dssp EEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---C-
T ss_pred EEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCc-
Confidence 999999999999999988888765 48899999999999763 3789999999987655432
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCC
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLS 643 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~ 643 (736)
.....+||+.|||||++.+. +..++|+||+|+++++|.++..++
T Consensus 395 -~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 395 -WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp -CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred -cccCceechhhccHHHhCCC-CCCcccccccccchhhhccccchh
Confidence 24567899999999999764 677899999999998887765443
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4.3e-20 Score=208.46 Aligned_cols=168 Identities=13% Similarity=0.125 Sum_probs=130.6
Q ss_pred ccccCeeceeEEEEeeeCCCcEEEEEEeCccc---------ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 467 KEELGRGGSGAVYKGVLADGRAVAVKRLGDLH---------QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.+.||+|+||.||+|+. .++.+|+|+..... ...+.+.+|+++|++++||||+++..++...+..+||||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 45899999999999965 57889999864321 112457899999999999999976666678888899999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC--------------ccEEcccCcccccCCCCCcc-----
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF--------------EPKIADFGLAKLSQRGSNSS----- 598 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~--------------~~kl~DFGla~~~~~~~~~~----- 598 (736)
|+++++|.+++.. +..++.|+++||.|||++++ .+||+|||+++.........
T Consensus 420 ~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~~~kL~DFGla~~~~~~~~~~~~~~~ 491 (540)
T 3en9_A 420 YINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDKDLYIIDFGLGKISNLDEDKAVDLIV 491 (540)
T ss_dssp CCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESSSEEECCCTTCEECCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECCeEEEEECccCEECCCccccccchhh
Confidence 9999999999976 56899999999999997532 68999999999875432211
Q ss_pred eeecccccCcccChhcccC--CCCccccceechhHHHHHHHhCCCCC
Q 041821 599 QFSQIRGTKGYMAPEWASN--LPITAKVDVYSYGVVILEMVKGIRLS 643 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~el~tg~~p~ 643 (736)
......||+.|||||++.. ..|+.++|+||..+-..+.+.++.++
T Consensus 492 ~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 492 FKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred hhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 1235789999999999986 56888999999999999988887665
|
| >4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* | Back alignment and structure |
|---|
Probab=99.65 E-value=7.3e-16 Score=132.84 Aligned_cols=86 Identities=20% Similarity=0.398 Sum_probs=69.0
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCC-CcceEEE
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTST-GADRAEL 79 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~-~~~~a~L 79 (736)
|.|.|.|...+ + |.++. ..++||+|||+.|.. .++.|+|..||+|||.|+++.+||+|+++.. ....|+|
T Consensus 19 g~y~l~~q~Dg--N--Lvly~----~~~~vW~ant~~~~~-~~~~L~l~~dGnLvL~d~~~~~vWss~t~~~~~~~~l~L 89 (105)
T 4h3o_A 19 EPYHFIMQDDC--N--LVLYD----HSTSTWASNTEIGGK-SGCSAVLQSDGNFVVYDSSGRSLWASHSTRGSGNYILIL 89 (105)
T ss_dssp TTEEEEECTTS--C--EEEEE----TTEEEEECCCCCTTC-CSCEEEECTTSCEEEECTTCCEEEECCCCCCSSCEEEEE
T ss_pred CCEEEEECCCC--e--EEEEE----CCEEEEEecCCCCCC-ccEEEEEeCCccEEEECCCcEEEEEecCCCCCCCEEEEE
Confidence 56777775322 2 34544 358999999999975 4678999999999999999999999998643 4467999
Q ss_pred ccCCCeEEEccCCceeeee
Q 041821 80 LDTGNLVLKDRHGKILWQS 98 (736)
Q Consensus 80 ldsGNlVl~~~~~~~lWqS 98 (736)
+|+|||||++ ..||||
T Consensus 90 ~ddGNlVly~---~~~W~S 105 (105)
T 4h3o_A 90 QDDGNVIIYG---SDIWST 105 (105)
T ss_dssp CTTSCEEEEE---SEEEEC
T ss_pred eCCCeEEEEC---CcEecC
Confidence 9999999996 469998
|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.8e-15 Score=131.85 Aligned_cols=90 Identities=23% Similarity=0.432 Sum_probs=74.4
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCC-CcceEEE
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTST-GADRAEL 79 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~-~~~~a~L 79 (736)
|.|+|+|+..+ +. +||+ ..++||.||++.|. .++.++|..+|||||.|.++.++|++++..+ +...++|
T Consensus 20 ~~~~l~~~~dG--nl---vl~~---~~~~vW~sn~~~~~--~~~~l~l~~dGNLVl~~~~~~~~W~S~t~~~~g~~~l~l 89 (110)
T 3a0c_A 20 PSYRLIMQGDC--NF---VLYD---SGKPVWASNTGGLG--SGCRLTLHNNGNLVIYDQSNRVIWQTKTNGKEDHYVLVL 89 (110)
T ss_dssp TTEEEEECTTS--CE---EEEE---TTEEEEECCCTTSC--SSCEEEECTTSCEEEECTTCCEEEECCCCCSSSCCEEEE
T ss_pred CCEEEEEcCCC--cE---EEEE---CCEEEEECCCCCCC--CcEEEEEeCCCCEEEECCCCcEEEecCCCCCCCCEEEEE
Confidence 57999997644 22 7786 36999999998763 4678999999999999999999999998644 3457999
Q ss_pred ccCCCeEEEccCCceeeeecCCCC
Q 041821 80 LDTGNLVLKDRHGKILWQSFDYPT 103 (736)
Q Consensus 80 ldsGNlVl~~~~~~~lWqSFd~PT 103 (736)
+|+|||||++. ++||||+||.
T Consensus 90 ~~dGnlvl~~~---~~W~S~~~~~ 110 (110)
T 3a0c_A 90 QQDRNVVIYGP---VVWATGSGPA 110 (110)
T ss_dssp CTTSCEEEECS---EEEECSCCC-
T ss_pred eCCccEEEECC---CEecCCCcCC
Confidence 99999999974 8999999984
|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=3.1e-15 Score=131.72 Aligned_cols=91 Identities=19% Similarity=0.371 Sum_probs=75.1
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCC-CCcceEEE
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTS-TGADRAEL 79 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~-~~~~~a~L 79 (736)
|.|+|+|++.+ +. ++|+ ..++||+||++.|. .++.|+|..+|||||.|.++.++|+++... .....|+|
T Consensus 20 g~~~L~~~~dg--nl---vly~---~~~~vW~sn~~~~~--~~~~l~l~~~GnLvl~d~~~~~vW~S~~~~~~g~~~l~l 89 (115)
T 2dpf_A 20 GAYTLTIQNKC--NL---VKYQ---NGRQIWASNTDRRG--SGCRLTLLSDGNLVIYDHNNNDVWGSACWGDNGKYALVL 89 (115)
T ss_dssp TTEEEEECTTS--CE---EEEE---TTEEEEECSCTTSC--SSCEEEECTTSCEEEECTTCCEEEECCCCCSSSCCEEEE
T ss_pred CCEEEEEcCCC--cE---EEEe---CCEEEEeCCCCCCC--CceEEEECCCCcEEEECCCceEEEEcCCCCCCCCEEEEE
Confidence 68999997544 33 3465 37899999999884 468999999999999998899999999863 34567999
Q ss_pred ccCCCeEEEccCCceeeeecCCCCC
Q 041821 80 LDTGNLVLKDRHGKILWQSFDYPTD 104 (736)
Q Consensus 80 ldsGNlVl~~~~~~~lWqSFd~PTD 104 (736)
+|+|||||++. ++||||.+++.
T Consensus 90 ~~dGnlvl~~~---~~W~S~~~~~~ 111 (115)
T 2dpf_A 90 QKDGRFVIYGP---VLWSLGPNGCR 111 (115)
T ss_dssp CTTSCEEEECS---EEECSSTTCBC
T ss_pred eCCCeEEEECC---CEEECCCCCCc
Confidence 99999999964 89999998764
|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A | Back alignment and structure |
|---|
Probab=99.59 E-value=7.1e-15 Score=128.78 Aligned_cols=91 Identities=16% Similarity=0.362 Sum_probs=75.4
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCC-CcceEEE
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTST-GADRAEL 79 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~-~~~~a~L 79 (736)
|.|+|+|+++++ . +||++ .++||+||++.+ +.++.++|..+|||||.| ++.++|+++...+ +...++|
T Consensus 19 ~~~~L~~~~dgn--l---vl~~~---~~~vW~sn~~~~--~~~~~l~l~~~GNLvl~d-~~~~~W~S~~~~~~g~~~l~l 87 (112)
T 1xd5_A 19 GGYLFIIQNDCN--L---VLYDN---NRAVWASGTNGK--ASGCVLKMQNDGNLVIYS-GSRAIWASNTNRQNGNYYLIL 87 (112)
T ss_dssp TTEEEEECTTSC--E---EEEET---TEEEEECCCTTS--CSSEEEEECTTSCEEEEE-TTEEEEECCCCCSCCCCEEEE
T ss_pred CCEEEEEcCCCc--E---EEEEC---CEEEEeCCCcCC--CCCEEEEEeCCCCEEEEc-CCEEEEECCccCCCCCEEEEE
Confidence 579999987553 2 56764 689999999764 346789999999999999 8889999987643 3467999
Q ss_pred ccCCCeEEEccCCceeeeecCCC
Q 041821 80 LDTGNLVLKDRHGKILWQSFDYP 102 (736)
Q Consensus 80 ldsGNlVl~~~~~~~lWqSFd~P 102 (736)
.++|||||++.++.++||||++.
T Consensus 88 ~~dGnlvl~~~~~~~~W~S~~~~ 110 (112)
T 1xd5_A 88 QRDRNVVIYDNSNNAIWATHTNV 110 (112)
T ss_dssp CTTSCEEEECTTSCEEEECCCCC
T ss_pred eCCCcEEEECCCCceEEECCCcc
Confidence 99999999987788999999984
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=4.3e-16 Score=160.96 Aligned_cols=128 Identities=15% Similarity=0.039 Sum_probs=99.8
Q ss_pred hhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc-------------------ccHHHHHHHHHHHhcCCCCceeeEEE
Q 041821 464 KSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH-------------------QGEEVFWAEVSTIGKIYHMNLVRMWG 524 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-------------------~~~~~~~~E~~~l~~l~h~niv~l~~ 524 (736)
|.+.+.||+|+||.||+|+..+++.||||.++... .....+.+|+.+|++++ | +++++
T Consensus 92 ~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~ 168 (282)
T 1zar_A 92 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPK 168 (282)
T ss_dssp SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCC
T ss_pred EEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCe
Confidence 34568999999999999999779999999996422 12456889999999999 4 56666
Q ss_pred EEEeCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC---------------CCccEEcccCccc
Q 041821 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD---------------EFEPKIADFGLAK 589 (736)
Q Consensus 525 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~---------------~~~~kl~DFGla~ 589 (736)
++.. +..++||||+++++|.+ +.. .....++.|+++||.|||+. +..+||+|||+|+
T Consensus 169 ~~~~-~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~~~~vkl~DFG~a~ 240 (282)
T 1zar_A 169 VYAW-EGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEGIWIIDFPQSV 240 (282)
T ss_dssp EEEE-ETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTEEEECCCTTCE
T ss_pred EEec-cceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEECCcEEEEECCCCe
Confidence 5544 55699999999999998 532 23457999999999999965 3368999999986
Q ss_pred ccCCCCCcceeecccccCcccChhcccC
Q 041821 590 LSQRGSNSSQFSQIRGTKGYMAPEWASN 617 (736)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 617 (736)
. +..++|||++..
T Consensus 241 ~---------------~~~~~a~e~l~r 253 (282)
T 1zar_A 241 E---------------VGEEGWREILER 253 (282)
T ss_dssp E---------------TTSTTHHHHHHH
T ss_pred E---------------CCCCCHHHHHHH
Confidence 3 345789998753
|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=7.6e-15 Score=129.59 Aligned_cols=86 Identities=19% Similarity=0.415 Sum_probs=72.1
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCC-CcceEEE
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTST-GADRAEL 79 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~-~~~~a~L 79 (736)
|.|+|+|+++++ . +||++ +++||+|||+.| +.++.++|..+|||||.|.++.++|++++..+ +...++|
T Consensus 30 g~~~L~~~~dgn--l---vly~~---~~~vW~sn~~~~--~~~~~l~l~~dGNLVl~d~~~~~lW~S~~~~~~g~~~l~l 99 (119)
T 1b2p_A 30 HVYRFIMQTDCN--L---VLYDN---NNPIWATNTGGL--GNGCRAVLQPDGVLVVITNENVTVWQSPVAGKAGHYVLVL 99 (119)
T ss_dssp EEEEEEECTTSC--E---EEEET---TEEEEECCCTTS--CSSCEEEECTTSCEEEECTTCCEEEECSCCCCSSCEEEEE
T ss_pred CCEEEEEecCCC--E---EEEEC---CEEEEeCCCccC--CCceEEEEccCCEEEEEeCCCcEEEcCCCCCCCCCEEEEE
Confidence 579999997542 2 68975 799999999877 34689999999999999999999999997643 3567999
Q ss_pred ccCCCeEEEccCCceeeeec
Q 041821 80 LDTGNLVLKDRHGKILWQSF 99 (736)
Q Consensus 80 ldsGNlVl~~~~~~~lWqSF 99 (736)
+|+|||||++ .++|||=
T Consensus 100 ~~~Gnlvl~~---~~~W~Sg 116 (119)
T 1b2p_A 100 QPDRNVVIYG---DALWATQ 116 (119)
T ss_dssp CTTSCEEEEE---SEEEECC
T ss_pred ECCCcEEEEC---ccEeCCC
Confidence 9999999998 3899983
|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=2.1e-14 Score=125.10 Aligned_cols=88 Identities=24% Similarity=0.456 Sum_probs=72.6
Q ss_pred CCCceEEEeeCCcEEEEeCCCcEEEeCCCCCC-CcceEEEccCCCeEEEccCCceeeeecCCCCCccCCCcccCCCceEE
Q 041821 41 GQGSRASLRRNGAMVLTDVDDTVIWMTNTTST-GADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLI 119 (736)
Q Consensus 41 ~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~-~~~~a~LldsGNlVl~~~~~~~lWqSFd~PTDTlLpg~~l~~~~~L~ 119 (736)
+...+|.+..+|+|+|.+ .+++||++|+... ....|+|+|+|||||+|.++.+|||||
T Consensus 19 ~~~~~l~~~~dGnlvl~~-~~~~vW~sn~~~~~~~~~l~l~~dGNLVl~~~~~~~~W~S~-------------------- 77 (110)
T 3a0c_A 19 GPSYRLIMQGDCNFVLYD-SGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQSNRVIWQTK-------------------- 77 (110)
T ss_dssp TTTEEEEECTTSCEEEEE-TTEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECC--------------------
T ss_pred CCCEEEEEcCCCcEEEEE-CCEEEEECCCCCCCCcEEEEEeCCCCEEEECCCCcEEEecC--------------------
Confidence 346789999999999999 5899999998643 346799999999999999899999999
Q ss_pred ecCCCCCCCCCcceEEEcCCCceEEEecCCCccceecCCCC
Q 041821 120 SGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPD 160 (736)
Q Consensus 120 S~~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~yw~~~~ 160 (736)
+++++|.|++.++++|.+.++ .+ .||.++.
T Consensus 78 -----t~~~~g~~~l~l~~dGnlvl~-~~-----~~W~S~~ 107 (110)
T 3a0c_A 78 -----TNGKEDHYVLVLQQDRNVVIY-GP-----VVWATGS 107 (110)
T ss_dssp -----CCCSSSCCEEEECTTSCEEEE-CS-----EEEECSC
T ss_pred -----CCCCCCCEEEEEeCCccEEEE-CC-----CEecCCC
Confidence 345678999999999997664 32 5887654
|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A | Back alignment and structure |
|---|
Probab=99.54 E-value=2.6e-14 Score=125.20 Aligned_cols=95 Identities=17% Similarity=0.371 Sum_probs=75.7
Q ss_pred CCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCC-CcceEEEccCCCeEEEccCCceeeeecCCCCCccCCCcccCC
Q 041821 36 DRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTST-GADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRK 114 (736)
Q Consensus 36 ~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~-~~~~a~LldsGNlVl~~~~~~~lWqSFd~PTDTlLpg~~l~~ 114 (736)
+.|+.+...+|.+..+|+|+|.+. +++||++|+... ....|+|+|+|||||+| ++.++||||+
T Consensus 13 g~~L~~~~~~L~~~~dgnlvl~~~-~~~vW~sn~~~~~~~~~l~l~~~GNLvl~d-~~~~~W~S~~-------------- 76 (112)
T 1xd5_A 13 GGSLAEGGYLFIIQNDCNLVLYDN-NRAVWASGTNGKASGCVLKMQNDGNLVIYS-GSRAIWASNT-------------- 76 (112)
T ss_dssp TCEEEETTEEEEECTTSCEEEEET-TEEEEECCCTTSCSSEEEEECTTSCEEEEE-TTEEEEECCC--------------
T ss_pred CCEEeCCCEEEEEcCCCcEEEEEC-CEEEEeCCCcCCCCCEEEEEeCCCCEEEEc-CCEEEEECCc--------------
Confidence 344545567899999999999987 799999998643 34679999999999999 7889999994
Q ss_pred CceEEecCCCCCCCCCcceEEEcCCCceEEEecCCCccceecCCCC
Q 041821 115 STKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPD 160 (736)
Q Consensus 115 ~~~L~S~~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~yw~~~~ 160 (736)
++++|.|++.++++|.+.++... ...||.+..
T Consensus 77 -----------~~~~g~~~l~l~~dGnlvl~~~~---~~~~W~S~~ 108 (112)
T 1xd5_A 77 -----------NRQNGNYYLILQRDRNVVIYDNS---NNAIWATHT 108 (112)
T ss_dssp -----------CCSCCCCEEEECTTSCEEEECTT---SCEEEECCC
T ss_pred -----------cCCCCCEEEEEeCCCcEEEECCC---CceEEECCC
Confidence 44578899999999997765322 347888764
|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=6.4e-14 Score=123.62 Aligned_cols=85 Identities=27% Similarity=0.393 Sum_probs=70.6
Q ss_pred ceEEEeeCCcEEEEeCCCcEEEeCCCCCCC-cceEEEccCCCeEEEccCCceeeeecCCCCCccCCCcccCCCceEEecC
Q 041821 44 SRASLRRNGAMVLTDVDDTVIWMTNTTSTG-ADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLISGV 122 (736)
Q Consensus 44 ~~l~l~~~G~L~l~~~~~~~vWstn~~~~~-~~~a~LldsGNlVl~~~~~~~lWqSFd~PTDTlLpg~~l~~~~~L~S~~ 122 (736)
..|.+..+|+|+|.+. +++||++|+.... ...|+|+|+|||||+|.++.+|||||
T Consensus 32 ~~L~~~~dgnlvly~~-~~~vW~sn~~~~~~~~~l~l~~dGNLVl~d~~~~~lW~S~----------------------- 87 (119)
T 1b2p_A 32 YRFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQSP----------------------- 87 (119)
T ss_dssp EEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECS-----------------------
T ss_pred EEEEEecCCCEEEEEC-CEEEEeCCCccCCCceEEEEccCCEEEEEeCCCcEEEcCC-----------------------
Confidence 4677788999999987 8999999986433 46899999999999999899999999
Q ss_pred CCCCCCCCcceEEEcCCCceEEEecCCCccceecCCCC
Q 041821 123 GNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPD 160 (736)
Q Consensus 123 s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~yw~~~~ 160 (736)
+++++|.|++.++++|.+.++. ..||.++.
T Consensus 88 --~~~~~g~~~l~l~~~Gnlvl~~------~~~W~Sg~ 117 (119)
T 1b2p_A 88 --VAGKAGHYVLVLQPDRNVVIYG------DALWATQT 117 (119)
T ss_dssp --CCCCSSCEEEEECTTSCEEEEE------SEEEECCC
T ss_pred --CCCCCCCEEEEEECCCcEEEEC------ccEeCCCC
Confidence 3566889999999999976643 26887663
|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.9e-13 Score=118.91 Aligned_cols=88 Identities=15% Similarity=0.257 Sum_probs=70.7
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCCC-cceEEE
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTG-ADRAEL 79 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~~-~~~a~L 79 (736)
|.|+|+|...+ +.. .|.. .++||++|++.+ +.+..|.|..+|||||.|.++.++|++++.... ...|+|
T Consensus 19 g~~~L~~q~dG--nLv---ly~~---~~~vW~snt~~~--~~~~~l~l~~dGNLvl~~~~~~~~W~S~t~~~~~~~~~~L 88 (109)
T 3dzw_A 19 GRYVFIMQEDC--NLV---LYDV---DKPIWATNTGGL--DRRCHLSMQSDGNLVVYSPRNNPIWASNTGGENGNYVCVL 88 (109)
T ss_dssp TTEEEEECTTS--CEE---EEET---TEEEEECCCTTS--SSSCEEEECTTSCEEEECTTSCEEEECCCCCSSSCEEEEE
T ss_pred CCEEEEEcCCC--cEE---EEeC---CEEEEECCcccC--CCCEEEEEeCCCCEEEECCCCCEEEECCCCCCCCCEEEEE
Confidence 67999997644 333 3654 589999999876 346789999999999999989999999986443 357999
Q ss_pred ccCCCeEEEccCCceeeeecCC
Q 041821 80 LDTGNLVLKDRHGKILWQSFDY 101 (736)
Q Consensus 80 ldsGNlVl~~~~~~~lWqSFd~ 101 (736)
+|+|||||++. ++|||=-+
T Consensus 89 ~ddGNlvly~~---~~W~s~t~ 107 (109)
T 3dzw_A 89 QKDRNVVIYGT---ARWATGTN 107 (109)
T ss_dssp CTTSCEEEEES---CCCCCCCC
T ss_pred eCCCEEEEECC---CEEeCCCc
Confidence 99999999984 89998543
|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=6.1e-13 Score=116.96 Aligned_cols=87 Identities=23% Similarity=0.409 Sum_probs=71.7
Q ss_pred CCceEEEeeCCcEEEEeCCCcEEEeCCCCCC-CcceEEEccCCCeEEEccCCceeeeecCCCCCccCCCcccCCCceEEe
Q 041821 42 QGSRASLRRNGAMVLTDVDDTVIWMTNTTST-GADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLIS 120 (736)
Q Consensus 42 ~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~-~~~~a~LldsGNlVl~~~~~~~lWqSFd~PTDTlLpg~~l~~~~~L~S 120 (736)
....|.+..+|+|+|.+ .++++|++|+... ....++|+++|||||+|.++.++||||++
T Consensus 20 g~~~L~~~~dgnlvly~-~~~~vW~sn~~~~~~~~~l~l~~~GnLvl~d~~~~~vW~S~~~------------------- 79 (115)
T 2dpf_A 20 GAYTLTIQNKCNLVKYQ-NGRQIWASNTDRRGSGCRLTLLSDGNLVIYDHNNNDVWGSACW------------------- 79 (115)
T ss_dssp TTEEEEECTTSCEEEEE-TTEEEEECSCTTSCSSCEEEECTTSCEEEECTTCCEEEECCCC-------------------
T ss_pred CCEEEEEcCCCcEEEEe-CCEEEEeCCCCCCCCceEEEECCCCcEEEECCCceEEEEcCCC-------------------
Confidence 35678888999999998 5889999998643 34689999999999999888999999997
Q ss_pred cCCCCCCCCCcceEEEcCCCceEEEecCCCccceecCCCC
Q 041821 121 GVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPD 160 (736)
Q Consensus 121 ~~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~yw~~~~ 160 (736)
+++|.|++.++++|.+.++ .. .||.+..
T Consensus 80 ------~~~g~~~l~l~~dGnlvl~-~~-----~~W~S~~ 107 (115)
T 2dpf_A 80 ------GDNGKYALVLQKDGRFVIY-GP-----VLWSLGP 107 (115)
T ss_dssp ------CSSSCCEEEECTTSCEEEE-CS-----EEECSST
T ss_pred ------CCCCCEEEEEeCCCeEEEE-CC-----CEEECCC
Confidence 3467899999999997764 32 6888764
|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
Probab=99.30 E-value=1.3e-11 Score=107.78 Aligned_cols=87 Identities=17% Similarity=0.260 Sum_probs=66.0
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCC-CcceEEE
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTST-GADRAEL 79 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~-~~~~a~L 79 (736)
|.|.|-|... ++ |.+ |.. ...++||.+|+..+- .+..+.|..+|||||.|.++.++|++++... +...|+|
T Consensus 24 g~~~L~~q~d--GN--LvL-~~~-~~~~~vWssnt~~~~--~~~~l~l~~dGNLVl~d~~~~~iW~S~t~~~~~~~~~~L 95 (113)
T 3mez_B 24 RDYSLVMRDD--CN--LVL-TKG-SKTNIVWESGTSGRG--QHCFMRLGHSGELDITDDRLNTVFVSNTVGQEGDYVLIL 95 (113)
T ss_dssp TTEEEEECTT--SC--EEE-EET-TTTEEEEECCCTTSC--SSCEEEECTTSCEEEECTTSCEEEECSCCCSSSCCEEEE
T ss_pred CCEEEEEcCC--CE--EEE-EEC-CCCEEEEECCcccCC--cCEEEEEeCCCcEEEECCCCCEEEECCCcCCCCCEEEEE
Confidence 4566666432 22 334 332 136899999998762 4578999999999999998999999998643 3468999
Q ss_pred ccCCCeEEEccCCceeeee
Q 041821 80 LDTGNLVLKDRHGKILWQS 98 (736)
Q Consensus 80 ldsGNlVl~~~~~~~lWqS 98 (736)
+|+|||||++ ..+|+|
T Consensus 96 ~~dGnlvly~---~~~W~s 111 (113)
T 3mez_B 96 QINGQAVVYG---PAVWST 111 (113)
T ss_dssp CTTSCEEEEC---SEEEES
T ss_pred cCCceEEEec---CCEecC
Confidence 9999999997 689997
|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.5e-11 Score=106.83 Aligned_cols=84 Identities=19% Similarity=0.311 Sum_probs=64.2
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCC-CcceEEE
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTST-GADRAEL 79 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~-~~~~a~L 79 (736)
|.|.|-|- .. ++ |.+ |.. ++||.+|++.. +.+..++|..+|||||.|.++.++|++++... +...|+|
T Consensus 24 g~~~L~~q-~d-Gn--Lvl-~~~----~~vW~snt~~~--~~~~~l~l~~dGNLvl~d~~~~~iW~S~t~~~~~~~~~~L 92 (110)
T 3r0e_B 24 KNHQLVMQ-GD-CN--LVL-YGG----KYGWQSNTHGN--GEHCFLRLNHKGELIIKDDDFKTIWSSRSSSKQGEYVLIL 92 (110)
T ss_dssp SSCEEEEC-TT-SC--EEE-ECS----SSCEECCCTTS--SSSCEEEECTTSCEEEECTTCCEEEECCCCCSSSCCEEEE
T ss_pred CCEEEEEc-CC-Ce--EEE-ECC----eEEEECCCcCC--CcCEEEEEeCCCcEEEEeCCCCEEEEcCCcCCCCCEEEEE
Confidence 45777543 22 23 223 654 48999999863 34578999999999999999999999998532 3467999
Q ss_pred ccCCCeEEEccCCceeeee
Q 041821 80 LDTGNLVLKDRHGKILWQS 98 (736)
Q Consensus 80 ldsGNlVl~~~~~~~lWqS 98 (736)
+|+|||||++ ..+|+|
T Consensus 93 ~~dGNlvly~---~~~W~t 108 (110)
T 3r0e_B 93 QDDGFGVIYG---PAIFET 108 (110)
T ss_dssp CTTSCEEEEC---SEEEES
T ss_pred cCCccEEEec---CCEecC
Confidence 9999999998 489997
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=3.6e-12 Score=129.76 Aligned_cols=121 Identities=14% Similarity=0.105 Sum_probs=89.9
Q ss_pred hhcccccCeeceeEEEEeee-CCCcE--EEEEEeCccccc-------------------------HHHHHHHHHHHhcCC
Q 041821 464 KSFKEELGRGGSGAVYKGVL-ADGRA--VAVKRLGDLHQG-------------------------EEVFWAEVSTIGKIY 515 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~-~~~~~--vavK~~~~~~~~-------------------------~~~~~~E~~~l~~l~ 515 (736)
+.+.+.||+|+||.||+|.. .+|+. ||||+++..... ...+.+|+.+|.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45778999999999999997 67888 999987542111 135789999999998
Q ss_pred CCce--eeEEEEEEeCCeEEEEEecCCC-C----CHhhhcccCCCCCHHHHHHHHHHHHHHhhhhh-cCCC---------
Q 041821 516 HMNL--VRMWGFCSEGRHRLLIYEYVEK-Q----SLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-HDEF--------- 578 (736)
Q Consensus 516 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH-~~~~--------- 578 (736)
|+++ ..+++. ...+|||||+.+ | +|.+.... .++..+..++.|++.||.||| +.++
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~N 201 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYN 201 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHH
Confidence 8754 344432 356899999942 4 67665432 234567889999999999999 5421
Q ss_pred -----ccEEcccCccccc
Q 041821 579 -----EPKIADFGLAKLS 591 (736)
Q Consensus 579 -----~~kl~DFGla~~~ 591 (736)
.++|+|||+|...
T Consensus 202 ILl~~~~~liDFG~a~~~ 219 (258)
T 1zth_A 202 IMYIDKVYFIDMGQAVTL 219 (258)
T ss_dssp EEESSSEEECCCTTCEET
T ss_pred EEEcCcEEEEECcccccC
Confidence 5899999999754
|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
Probab=99.17 E-value=1.1e-10 Score=101.90 Aligned_cols=86 Identities=15% Similarity=0.224 Sum_probs=69.9
Q ss_pred CCCCCCCCCceEEEeeCCcEEEEeC-CCcEEEeCCCCCC-CcceEEEccCCCeEEEccCCceeeeecCCCCCccCCCccc
Q 041821 35 RDRPVNGQGSRASLRRNGAMVLTDV-DDTVIWMTNTTST-GADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVF 112 (736)
Q Consensus 35 r~~p~~~~~~~l~l~~~G~L~l~~~-~~~~vWstn~~~~-~~~~a~LldsGNlVl~~~~~~~lWqSFd~PTDTlLpg~~l 112 (736)
.+.|+.+....|.+..||||||.+. .++++|++++... ....|+|+|+|||||+|.++.++|||-.+-
T Consensus 17 ~g~~L~~g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~iW~S~t~~---------- 86 (113)
T 3mez_B 17 DNAQLATRDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNTVFVSNTVG---------- 86 (113)
T ss_dssp TTCEEEETTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCEEEECSCCC----------
T ss_pred CCCEeEcCCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCEEEECCCcC----------
Confidence 4567766678999999999999998 4899999998643 346899999999999999889999985420
Q ss_pred CCCceEEecCCCCCCCCCcceEEEcCCCceEEE
Q 041821 113 RKSTKLISGVGNGTYASGYFSLYFDNDNVLRLI 145 (736)
Q Consensus 113 ~~~~~L~S~~s~~d~s~G~~~l~~~~~g~~~~~ 145 (736)
..|.|.+.++.+|.+.++
T Consensus 87 ---------------~~~~~~~~L~~dGnlvly 104 (113)
T 3mez_B 87 ---------------QEGDYVLILQINGQAVVY 104 (113)
T ss_dssp ---------------SSSCCEEEECTTSCEEEE
T ss_pred ---------------CCCCEEEEEcCCceEEEe
Confidence 124589999999999876
|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.5e-10 Score=100.29 Aligned_cols=82 Identities=18% Similarity=0.370 Sum_probs=63.7
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCC-CcceEEE
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTST-GADRAEL 79 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~-~~~~a~L 79 (736)
|.|.|.|...+ +. +.|.. +|.+|+..+ +.+..|+|..+|||||.|.++.++|++++... ....|+|
T Consensus 21 g~~~L~~q~dG--NL---vl~~~------~Wssnt~~~--~~~~~l~l~~dGnLvl~d~~~~~vWss~t~~~~~~~~~~L 87 (109)
T 3r0e_A 21 GDFDLVMQDDC--NL---VLYNG------NWQSNTANN--GRDCKLTLTDYGELVIKNGDGSTVWKSGAQSVKGNYAAVV 87 (109)
T ss_dssp TTEEEEECTTS--CE---EEETT------TEECCCTTS--CSSCEEEECTTSCEEEECTTSCEEEECCCCCSSSCCEEEE
T ss_pred CCEEEEEecCC--eE---EEEeC------eEEcCCCCC--CCcEEEEEcCCCeEEEEeCCCCEEEcCCCcCCCcCEEEEE
Confidence 56777774322 22 34542 699999865 34679999999999999998999999997643 3457999
Q ss_pred ccCCCeEEEccCCceeeee
Q 041821 80 LDTGNLVLKDRHGKILWQS 98 (736)
Q Consensus 80 ldsGNlVl~~~~~~~lWqS 98 (736)
+|+|||||++ ..+|+|
T Consensus 88 ~~dGNlvly~---~~~W~s 103 (109)
T 3r0e_A 88 HPDGRLVVFG---PSVFKI 103 (109)
T ss_dssp ETTTEEEEEC---SEEEEE
T ss_pred cCCCeEEEEe---cCEECC
Confidence 9999999997 689998
|
| >3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=1.1e-10 Score=101.40 Aligned_cols=93 Identities=15% Similarity=0.268 Sum_probs=71.3
Q ss_pred CCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCCC-cceEEEccCCCeEEEccCCc-eeeeecCCCCCccCCCcccC
Q 041821 36 DRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTG-ADRAELLDTGNLVLKDRHGK-ILWQSFDYPTDTLLPNQVFR 113 (736)
Q Consensus 36 ~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~~-~~~a~LldsGNlVl~~~~~~-~lWqSFd~PTDTlLpg~~l~ 113 (736)
+.++++....|.+..||||||.+.++ +|++++.... ...|+|+|+|||||++.++. ++|||..+
T Consensus 14 g~~L~~g~~~L~~q~dGnLvl~~~~~--vW~snt~~~~~~~~l~l~~dGNLVl~~~~~~~~vW~S~t~------------ 79 (111)
T 3mez_A 14 DNQLSYESAAFVMQGDCNLVLYNEAG--GFQSNTHGRGVDCTLRLNNRGQLEIHSANSNTPVWVYPRS------------ 79 (111)
T ss_dssp TCEEEETTEEEEECTTSCEEEECSSC--CEECCCTTSCSSCEEEECTTSCEEEECSSCSSCSEEESSS------------
T ss_pred CCEEecCCEEEEEccCCeEEEECCCC--EEECCcccCCcCEEEEEcCCCcEEEEeCCCCEEEEEeccc------------
Confidence 34454456789999999999999876 9999986433 36899999999999998765 59999832
Q ss_pred CCceEEecCCCCCCCCCcceEEEcCCCceEEEecCCCccceecCCC
Q 041821 114 KSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDP 159 (736)
Q Consensus 114 ~~~~L~S~~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~yw~~~ 159 (736)
.....|.|.+.++.+|.+.++- ..+|.++
T Consensus 80 -----------~~~~~~~~~l~Lq~dGNlvly~------~~~W~s~ 108 (111)
T 3mez_A 80 -----------VNTVRGNYAATLGPDQHVTIYG------PAIWSTP 108 (111)
T ss_dssp -----------CCCCSSCCEEEECTTSCEEEEC------SEEEECC
T ss_pred -----------cCCCCcCEEEEECCCCeEEEec------cCEEccC
Confidence 0113478999999999998762 3578665
|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=1.2e-09 Score=94.78 Aligned_cols=86 Identities=22% Similarity=0.343 Sum_probs=67.9
Q ss_pred CceEEEeeCCcEEEEeCCCcEEEeCCCCCCC-cceEEEccCCCeEEEccCCceeeeecCCCCCccCCCcccCCCceEEec
Q 041821 43 GSRASLRRNGAMVLTDVDDTVIWMTNTTSTG-ADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLISG 121 (736)
Q Consensus 43 ~~~l~l~~~G~L~l~~~~~~~vWstn~~~~~-~~~a~LldsGNlVl~~~~~~~lWqSFd~PTDTlLpg~~l~~~~~L~S~ 121 (736)
...|.+..+|+|+|.+. ++++|++|+.... ...++|+|+|||||+|.++.++|||....
T Consensus 20 ~~~L~~q~dGnLvly~~-~~~vW~snt~~~~~~~~l~l~~dGNLvl~~~~~~~~W~S~t~~------------------- 79 (109)
T 3dzw_A 20 RYVFIMQEDCNLVLYDV-DKPIWATNTGGLDRRCHLSMQSDGNLVVYSPRNNPIWASNTGG------------------- 79 (109)
T ss_dssp TEEEEECTTSCEEEEET-TEEEEECCCTTSSSSCEEEECTTSCEEEECTTSCEEEECCCCC-------------------
T ss_pred CEEEEEcCCCcEEEEeC-CEEEEECCcccCCCCEEEEEeCCCCEEEECCCCCEEEECCCCC-------------------
Confidence 46788899999999987 7899999986433 46799999999999998889999986421
Q ss_pred CCCCCCCCCcceEEEcCCCceEEEecCCCccceecCCCC
Q 041821 122 VGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPD 160 (736)
Q Consensus 122 ~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~yw~~~~ 160 (736)
..+.|.+.++.+|.+.++- ...|.+++
T Consensus 80 ------~~~~~~~~L~ddGNlvly~------~~~W~s~t 106 (109)
T 3dzw_A 80 ------ENGNYVCVLQKDRNVVIYG------TARWATGT 106 (109)
T ss_dssp ------SSSCEEEEECTTSCEEEEE------SCCCCCCC
T ss_pred ------CCCCEEEEEeCCCEEEEEC------CCEEeCCC
Confidence 1245789999999998763 14676553
|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
Probab=99.03 E-value=7.6e-10 Score=95.99 Aligned_cols=81 Identities=21% Similarity=0.341 Sum_probs=64.4
Q ss_pred CCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCCC-cceEEEccCCCeEEEccCCceeeeecCCCCCccCCCcccCCCc
Q 041821 38 PVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTG-ADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKST 116 (736)
Q Consensus 38 p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~~-~~~a~LldsGNlVl~~~~~~~lWqSFd~PTDTlLpg~~l~~~~ 116 (736)
++......|.+..+|||+|.+. .++|++|+.... ...|+|+|+|||||+|.++.++|||..+-
T Consensus 20 ~L~sg~~~L~~q~dGnLvl~~~--~~vW~snt~~~~~~~~l~l~~dGNLvl~d~~~~~iW~S~t~~-------------- 83 (110)
T 3r0e_B 20 RLTAKNHQLVMQGDCNLVLYGG--KYGWQSNTHGNGEHCFLRLNHKGELIIKDDDFKTIWSSRSSS-------------- 83 (110)
T ss_dssp EEECSSCEEEECTTSCEEEECS--SSCEECCCTTSSSSCEEEECTTSCEEEECTTCCEEEECCCCC--------------
T ss_pred EEEeCCEEEEEcCCCeEEEECC--eEEEECCCcCCCcCEEEEEeCCCcEEEEeCCCCEEEEcCCcC--------------
Confidence 3433457899999999999886 589999986433 35799999999999999889999986521
Q ss_pred eEEecCCCCCCCCCcceEEEcCCCceEEE
Q 041821 117 KLISGVGNGTYASGYFSLYFDNDNVLRLI 145 (736)
Q Consensus 117 ~L~S~~s~~d~s~G~~~l~~~~~g~~~~~ 145 (736)
..|.|.+.++.+|.++++
T Consensus 84 -----------~~~~~~~~L~~dGNlvly 101 (110)
T 3r0e_B 84 -----------KQGEYVLILQDDGFGVIY 101 (110)
T ss_dssp -----------SSSCCEEEECTTSCEEEE
T ss_pred -----------CCCCEEEEEcCCccEEEe
Confidence 134588999999999876
|
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=5.2e-09 Score=106.42 Aligned_cols=70 Identities=21% Similarity=0.511 Sum_probs=61.4
Q ss_pred CceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCCCcceEEEccCCCeEEEccCCceeeeecCC
Q 041821 27 RTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGADRAELLDTGNLVLKDRHGKILWQSFDY 101 (736)
Q Consensus 27 ~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~~~~~a~LldsGNlVl~~~~~~~lWqSFd~ 101 (736)
.+++|.+++..+- . ..+.+..+|+|++.|.++.++|++++.......|+|.++|||||++. .++||||||
T Consensus 183 ~~~yW~Sgt~~~~--~-~~l~l~~dGnLvl~d~~~~~vWsS~t~~~~~~rl~Ld~dGnLvly~~--~~~Wqsf~~ 252 (276)
T 3m7h_A 183 GAATWNAGTQGKG--A-VRAVFQGDGNLVVYGAGNAVLWHSHTGGHASAVLRLQANGSIAILDE--KPVWARFGF 252 (276)
T ss_dssp SSEEEECCCTTTT--C-CEEEECTTSCEEEECTTSCEEEECSCTTCTTCEEEECTTSCEEEEEE--EEEEESSSC
T ss_pred CeEEEECCCCCCc--c-EEEEEcCCCeEEEEeCCCcEEEEecCCCCCCEEEEEcCCccEEEEcC--CCeEEccCc
Confidence 5889999998762 2 78999999999999998899999998655567899999999999986 689999997
|
| >3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
Probab=98.89 E-value=5.9e-09 Score=90.53 Aligned_cols=84 Identities=11% Similarity=0.252 Sum_probs=62.3
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCc-EEEeCCCC---CCCcce
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDT-VIWMTNTT---STGADR 76 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~-~vWstn~~---~~~~~~ 76 (736)
|.|.|-|.. .++. +.|.. .. ||.+|+..+- .+..+.|..+|||||.|.++. ++|++++. ......
T Consensus 20 g~~~L~~q~--dGnL---vl~~~---~~-vW~snt~~~~--~~~~l~l~~dGNLVl~~~~~~~~vW~S~t~~~~~~~~~~ 88 (111)
T 3mez_A 20 ESAAFVMQG--DCNL---VLYNE---AG-GFQSNTHGRG--VDCTLRLNNRGQLEIHSANSNTPVWVYPRSVNTVRGNYA 88 (111)
T ss_dssp TTEEEEECT--TSCE---EEECS---SC-CEECCCTTSC--SSCEEEECTTSCEEEECSSCSSCSEEESSSCCCCSSCCE
T ss_pred CCEEEEEcc--CCeE---EEECC---CC-EEECCcccCC--cCEEEEEcCCCcEEEEeCCCCEEEEEeccccCCCCcCEE
Confidence 456666643 2233 33543 23 9999998762 457899999999999998775 59999863 223467
Q ss_pred EEEccCCCeEEEccCCceeeee
Q 041821 77 AELLDTGNLVLKDRHGKILWQS 98 (736)
Q Consensus 77 a~LldsGNlVl~~~~~~~lWqS 98 (736)
|.|+|+|||||++ ..+|+|
T Consensus 89 l~Lq~dGNlvly~---~~~W~s 107 (111)
T 3mez_A 89 ATLGPDQHVTIYG---PAIWST 107 (111)
T ss_dssp EEECTTSCEEEEC---SEEEEC
T ss_pred EEECCCCeEEEec---cCEEcc
Confidence 9999999999997 789998
|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 | Back alignment and structure |
|---|
Probab=98.86 E-value=5.6e-09 Score=104.27 Aligned_cols=85 Identities=25% Similarity=0.401 Sum_probs=66.4
Q ss_pred CceEEEeeCCcEEEEeCCCcEEEeCCCCCCCcceEEEccCCCeEEEccCCceeeeecCCCCCccCCCcccCCCceEEecC
Q 041821 43 GSRASLRRNGAMVLTDVDDTVIWMTNTTSTGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLISGV 122 (736)
Q Consensus 43 ~~~l~l~~~G~L~l~~~~~~~vWstn~~~~~~~~a~LldsGNlVl~~~~~~~lWqSFd~PTDTlLpg~~l~~~~~L~S~~ 122 (736)
.-.|.+..+|+|+|.++ +++||++|+.......++|.++|||||+|.++.++|+|+++
T Consensus 27 ~f~l~f~~~gnl~ly~~-~~~vW~an~~~~~~~~l~l~~dGnLvl~d~~~~~vW~s~~~--------------------- 84 (236)
T 1dlp_A 27 SFRFTMQSDCNLVLFDS-DVRVWASNTAGATGCRAVLQSDGLLVILTAQNTIRWSSGTK--------------------- 84 (236)
T ss_dssp TEEEEECTTSCEEEEES-SSEEECCCCCSCSCCBCCBCSSSCBCCBCTTTCCSCCCCCC---------------------
T ss_pred CEEEEECCCCcEEEEEC-CEEEEECCCCCCCCeEEEEcCCCcEEEEcCCCcEEEeCCcc---------------------
Confidence 34566778999999986 79999999865556689999999999999999999999975
Q ss_pred CCCCCCCCcceEEEcCCCceEEEecCCCccceecCCC
Q 041821 123 GNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDP 159 (736)
Q Consensus 123 s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~yw~~~ 159 (736)
.++|.|.+.++.+|.+.++ . ..+|.+.
T Consensus 85 ----~~~~~~~~~l~d~Gnlvl~-~-----~~~W~S~ 111 (236)
T 1dlp_A 85 ----GSIGNYVLVLQPDRTVTIY-G-----PGLWDSG 111 (236)
T ss_dssp ----CCSSCCEEEECSSSCEEEE-C-----SEEEECS
T ss_pred ----ccCCcEEEEEeCCCCEEEe-c-----CCEEECC
Confidence 1245577888888888764 1 1567654
|
| >4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* | Back alignment and structure |
|---|
Probab=98.84 E-value=2e-08 Score=86.07 Aligned_cols=76 Identities=28% Similarity=0.437 Sum_probs=61.5
Q ss_pred ceEEEeeCCcEEEEeCCCcEEEeCCCCC--CCcceEEEccCCCeEEEccCCceeeeecCCCCCccCCCcccCCCceEEec
Q 041821 44 SRASLRRNGAMVLTDVDDTVIWMTNTTS--TGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLISG 121 (736)
Q Consensus 44 ~~l~l~~~G~L~l~~~~~~~vWstn~~~--~~~~~a~LldsGNlVl~~~~~~~lWqSFd~PTDTlLpg~~l~~~~~L~S~ 121 (736)
-+|.+-.||||||.+. +++||++|+.. .....++|.++|||||+|.++.++|+|-..
T Consensus 21 y~l~~q~DgNLvly~~-~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~~~~~vWss~t~-------------------- 79 (105)
T 4h3o_A 21 YHFIMQDDCNLVLYDH-STSTWASNTEIGGKSGCSAVLQSDGNFVVYDSSGRSLWASHST-------------------- 79 (105)
T ss_dssp EEEEECTTSCEEEEET-TEEEEECCCCCTTCCSCEEEECTTSCEEEECTTCCEEEECCCC--------------------
T ss_pred EEEEECCCCeEEEEEC-CEEEEEecCCCCCCccEEEEEeCCccEEEECCCcEEEEEecCC--------------------
Confidence 5688889999999985 68999999863 334679999999999999999999997321
Q ss_pred CCCCCCCCCcceEEEcCCCceEEE
Q 041821 122 VGNGTYASGYFSLYFDNDNVLRLI 145 (736)
Q Consensus 122 ~s~~d~s~G~~~l~~~~~g~~~~~ 145 (736)
...+.+.+.++.+|.+.++
T Consensus 80 -----~~~~~~~l~L~ddGNlVly 98 (105)
T 4h3o_A 80 -----RGSGNYILILQDDGNVIIY 98 (105)
T ss_dssp -----CCSSCEEEEECTTSCEEEE
T ss_pred -----CCCCCEEEEEeCCCeEEEE
Confidence 1245688999999999875
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=98.83 E-value=1.1e-09 Score=116.26 Aligned_cols=120 Identities=10% Similarity=0.037 Sum_probs=81.8
Q ss_pred hhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccc---------------cHHH--------HHHHHHHHhcCCCCcee
Q 041821 464 KSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQ---------------GEEV--------FWAEVSTIGKIYHMNLV 520 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---------------~~~~--------~~~E~~~l~~l~h~niv 520 (736)
|.+.+.||+|+||.||+|...+|+.||||+++.... .... ..+|...|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 678889999999999999988899999998753110 0111 23466666666544332
Q ss_pred eEEEEEEeCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------------
Q 041821 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF---------------------- 578 (736)
Q Consensus 521 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------------- 578 (736)
-..-+... ..+|||||+++++|.++... .....++.|++.+|.|||+.++
T Consensus 177 vp~p~~~~--~~~LVME~i~G~~L~~l~~~------~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~ 248 (397)
T 4gyi_A 177 VPEPIAQS--RHTIVMSLVDALPMRQVSSV------PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPS 248 (397)
T ss_dssp CCCEEEEE--TTEEEEECCSCEEGGGCCCC------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTT
T ss_pred CCeeeecc--CceEEEEecCCccHhhhccc------HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCccccc
Confidence 11111112 23699999999888765432 2346788999999999996532
Q ss_pred ----ccEEcccCccccc
Q 041821 579 ----EPKIADFGLAKLS 591 (736)
Q Consensus 579 ----~~kl~DFGla~~~ 591 (736)
.+.|+||+-+...
T Consensus 249 ~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 249 SITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SEEEEEEECCCTTCEET
T ss_pred ccccceEEEEeCCcccC
Confidence 2679999987644
|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.2e-08 Score=88.12 Aligned_cols=90 Identities=20% Similarity=0.325 Sum_probs=68.0
Q ss_pred CCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCCC-cceEEEccCCCeEEEccCCceeeeecCCCCCccCCCcccC
Q 041821 35 RDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTG-ADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFR 113 (736)
Q Consensus 35 r~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~~-~~~a~LldsGNlVl~~~~~~~lWqSFd~PTDTlLpg~~l~ 113 (736)
.+.|+++....|.+..||||||.++ +|++++...+ ...++|.++|||||+|.++.++|+|-..
T Consensus 14 ~g~~L~~g~~~L~~q~dGNLvl~~~----~Wssnt~~~~~~~~l~l~~dGnLvl~d~~~~~vWss~t~------------ 77 (109)
T 3r0e_A 14 TEGHLKNGDFDLVMQDDCNLVLYNG----NWQSNTANNGRDCKLTLTDYGELVIKNGDGSTVWKSGAQ------------ 77 (109)
T ss_dssp TTCEEEETTEEEEECTTSCEEEETT----TEECCCTTSCSSCEEEECTTSCEEEECTTSCEEEECCCC------------
T ss_pred CCCEeECCCEEEEEecCCeEEEEeC----eEEcCCCCCCCcEEEEEcCCCeEEEEeCCCCEEEcCCCc------------
Confidence 4455555567899999999999984 7999987433 4679999999999999988999976321
Q ss_pred CCceEEecCCCCCCCCCcceEEEcCCCceEEEecCCCccceecCCC
Q 041821 114 KSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDP 159 (736)
Q Consensus 114 ~~~~L~S~~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~yw~~~ 159 (736)
...+.|.+.++.+|.+.++- ...|.++
T Consensus 78 -------------~~~~~~~~~L~~dGNlvly~------~~~W~s~ 104 (109)
T 3r0e_A 78 -------------SVKGNYAAVVHPDGRLVVFG------PSVFKID 104 (109)
T ss_dssp -------------CSSSCCEEEEETTTEEEEEC------SEEEEEC
T ss_pred -------------CCCcCEEEEEcCCCeEEEEe------cCEECCC
Confidence 01356889999999998762 2466654
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=1.6e-05 Score=80.41 Aligned_cols=108 Identities=10% Similarity=-0.045 Sum_probs=86.1
Q ss_pred hhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEEEEecCC
Q 041821 463 TKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
.|.+...++.|+.+.||+.... ++.+++|+..... .....+.+|+.+|+.+. |..+.++++++.+.+..++||||++
T Consensus 15 ~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~ 93 (263)
T 3tm0_A 15 KYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD 93 (263)
T ss_dssp TSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred cceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecC
Confidence 4667778888999999999864 6899999986422 22345788999999884 6788899999999999999999999
Q ss_pred CCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC
Q 041821 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD 576 (736)
Q Consensus 541 ~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~ 576 (736)
|.+|.+.+. +......++.+++++|..||+-
T Consensus 94 G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~ 124 (263)
T 3tm0_A 94 GVLCSEEYE-----DEQSPEKIIELYAECIRLFHSI 124 (263)
T ss_dssp SEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHS
T ss_pred CeehhhccC-----CcccHHHHHHHHHHHHHHHhCC
Confidence 999987642 1223457889999999999983
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0003 Score=70.58 Aligned_cols=97 Identities=14% Similarity=0.020 Sum_probs=73.8
Q ss_pred CeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCc--eeeEEEEEEeCCeEEEEEecCCCCCHhhhc
Q 041821 471 GRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMN--LVRMWGFCSEGRHRLLIYEYVEKQSLDKHL 548 (736)
Q Consensus 471 G~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l 548 (736)
+.|..+.||+....+|..+++|..... ....+.+|+.+++.+.+.+ +.+++++...++..++||||+++.+|. .
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 455669999998777888999997653 2234678999998886544 556889888888899999999998884 2
Q ss_pred ccCCCCCHHHHHHHHHHHHHHhhhhhcCC
Q 041821 549 FSSYFLGWKERFKVALGTAKGLAYLHHDE 577 (736)
Q Consensus 549 ~~~~~l~~~~~~~i~~~i~~gL~yLH~~~ 577 (736)
.. .+ ...++.++++.|..||...
T Consensus 105 ~~---~~---~~~~~~~l~~~l~~lh~~~ 127 (264)
T 1nd4_A 105 SH---LA---PAEKVSIMADAMRRLHTLD 127 (264)
T ss_dssp SC---CC---HHHHHHHHHHHHHHHTTSC
T ss_pred Cc---CC---HhHHHHHHHHHHHHHhCCC
Confidence 11 22 2367889999999999754
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00034 Score=74.10 Aligned_cols=108 Identities=15% Similarity=0.214 Sum_probs=80.7
Q ss_pred ccccCeeceeEEEEeeeCCCcEEEEEEeC--ccc--ccHHHHHHHHHHHhcCC--CCceeeEEEEEEeC---CeEEEEEe
Q 041821 467 KEELGRGGSGAVYKGVLADGRAVAVKRLG--DLH--QGEEVFWAEVSTIGKIY--HMNLVRMWGFCSEG---RHRLLIYE 537 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~--~~~--~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~e 537 (736)
.+.|+.|.++.||+....+ ..+++|+.. ... .....+.+|+.+++.+. +..+.+++.++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 3568999999999998754 678888876 322 22346788999999987 45688899988776 45799999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE 577 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~ 577 (736)
|+++..+.+... ..++..++..++.++++.|..||...
T Consensus 122 ~v~G~~l~~~~~--~~l~~~~~~~~~~~l~~~La~LH~~~ 159 (359)
T 3dxp_A 122 FVSGRVLWDQSL--PGMSPAERTAIYDEMNRVIAAMHTVD 159 (359)
T ss_dssp CCCCBCCCCTTC--TTCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred ecCCeecCCCcc--ccCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 999888754221 24778889999999999999999854
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=95.76 E-value=0.023 Score=58.38 Aligned_cols=103 Identities=17% Similarity=0.094 Sum_probs=77.6
Q ss_pred cccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCC---ceeeEEEEEE-eCCeEEEEEecCCCCC
Q 041821 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM---NLVRMWGFCS-EGRHRLLIYEYVEKQS 543 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~gs 543 (736)
+.++.|....||+. +..+++|+-.. ......+.+|+++|+.+.+. .+.+++.+.. ..+..++|||+++|..
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 35788888899987 56788888532 23346788999999998753 3556666664 3456789999999988
Q ss_pred HhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC
Q 041821 544 LDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE 577 (736)
Q Consensus 544 L~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~ 577 (736)
|...... .++..+...++.++++.|..||.-.
T Consensus 100 l~~~~~~--~l~~~~~~~~~~~lg~~La~LH~~~ 131 (306)
T 3tdw_A 100 LGEDGMA--VLPDDAKDRLALQLAEFMNELSAFP 131 (306)
T ss_dssp CHHHHHT--TSCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred Cchhhhh--hCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 8764322 3678888999999999999999754
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=95.49 E-value=0.035 Score=57.12 Aligned_cols=101 Identities=21% Similarity=0.219 Sum_probs=77.1
Q ss_pred cccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCC---CCceeeEEEEEEeCCeEEEEEecCCCCCH
Q 041821 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY---HMNLVRMWGFCSEGRHRLLIYEYVEKQSL 544 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~gsL 544 (736)
+.|+.|....+|+... ++..+++|+.... ....+..|+..|+.|. ...+.+++.+....+..++||||+++..+
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 4689999999999986 4678889987532 3556888999888874 36688899988888899999999998764
Q ss_pred hhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCCccEEcccCcc
Q 041821 545 DKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEFEPKIADFGLA 588 (736)
Q Consensus 545 ~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~~~kl~DFGla 588 (736)
.. ..+.++.+.|+-||..... .+||..
T Consensus 119 ~~--------------~~~~~lG~~LA~LH~~~~~---~~fG~~ 145 (312)
T 3jr1_A 119 KQ--------------SSFTIFAEKIAQLHQIQGP---DKYGLD 145 (312)
T ss_dssp CT--------------THHHHHHHHHHHHHHCCCC---SSBBCS
T ss_pred Cc--------------hhHHHHHHHHHHHHcCCCC---CCCCCC
Confidence 21 2456788899999987643 357653
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=95.38 E-value=0.02 Score=58.77 Aligned_cols=102 Identities=18% Similarity=0.132 Sum_probs=74.8
Q ss_pred cccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCC-CCc--eeeEEEEEEeCC---eEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-HMN--LVRMWGFCSEGR---HRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~~~~ 541 (736)
+.++.|....||+.. ..+++|..... .....+.+|+.+|+.+. +.. +.+++....... ..|+|||+++|
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 458999999999874 56889986533 33466889999998873 332 345555543333 34899999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD 576 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~ 576 (736)
.+|..... ..++..++..++.++++.|..||.-
T Consensus 101 ~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~ 133 (304)
T 3sg8_A 101 VPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSI 133 (304)
T ss_dssp EECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHS
T ss_pred eECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcC
Confidence 88875432 2478888999999999999999974
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=95.03 E-value=0.025 Score=54.18 Aligned_cols=93 Identities=13% Similarity=0.036 Sum_probs=53.5
Q ss_pred CCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhh-hcCCC--------ccEEcccCcccccCCCCCcceeecccccCcccC
Q 041821 542 QSLDKHLFSS-YFLGWKERFKVALGTAKGLAYL-HHDEF--------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611 (736)
Q Consensus 542 gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yL-H~~~~--------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~a 611 (736)
-+|.+.|... .++++++++.++.|.+++|.-+ +.++- .+.|.--|...+..... ......+.|
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~~~s-------~~~~~~~~~ 105 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAPAAD-------DAGEPPPVA 105 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECCC------------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceecccccc-------cccccCCCC
Confidence 4788888754 4899999999999999998766 11111 12222223222221110 012335678
Q ss_pred hhcccCCCCccccceechhHHHHHHHhCCCC
Q 041821 612 PEWASNLPITAKVDVYSYGVVILEMVKGIRL 642 (736)
Q Consensus 612 PE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p 642 (736)
||... ...+.+.=|||+|+++|.-+--..|
T Consensus 106 pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 106 GKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred hhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 88763 3457888999999999998864433
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=95.00 E-value=0.051 Score=54.40 Aligned_cols=102 Identities=15% Similarity=0.013 Sum_probs=74.3
Q ss_pred cCeecee-EEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEEEEecCCCCCHhh
Q 041821 470 LGRGGSG-AVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDK 546 (736)
Q Consensus 470 lG~G~fg-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 546 (736)
+..|..+ .||+.... ++..+++|+-... ....+.+|...|+.+. +--+.++++++.+++..++|||++++.++.+
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~ 109 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQ 109 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccc
Confidence 3334444 68987754 4678899986432 3445778999988774 4446788999999999999999999988877
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHhhhhhcCC
Q 041821 547 HLFSSYFLGWKERFKVALGTAKGLAYLHHDE 577 (736)
Q Consensus 547 ~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~ 577 (736)
.... .......+..++++.|.-||.-.
T Consensus 110 ~~~~----~~~~~~~~~~~l~~~L~~Lh~~~ 136 (272)
T 4gkh_A 110 VLEE----YPDSGENIVDALAVFLRRLHSIP 136 (272)
T ss_dssp HHHH----CGGGHHHHHHHHHHHHHHHHTSC
T ss_pred cccC----CHHHHHHHHHHHHHHHHHhcCCC
Confidence 6532 22344567889999999999754
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=94.22 E-value=0.034 Score=58.40 Aligned_cols=111 Identities=12% Similarity=-0.008 Sum_probs=79.3
Q ss_pred ccc-CeeceeEEEEeeeC-------CCcEEEEEEeCccc---c-cHHHHHHHHHHHhcCC-C--CceeeEEEEEEeC---
Q 041821 468 EEL-GRGGSGAVYKGVLA-------DGRAVAVKRLGDLH---Q-GEEVFWAEVSTIGKIY-H--MNLVRMWGFCSEG--- 529 (736)
Q Consensus 468 ~~l-G~G~fg~Vy~~~~~-------~~~~vavK~~~~~~---~-~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~--- 529 (736)
+.| +.|....+|+.... +++.+++|+..... . ....+.+|+.+|+.+. + ..+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 88889999998764 26688899875432 1 1245678888888874 2 3567788887665
Q ss_pred CeEEEEEecCCCCCHhhhccc----C--CCCCHHHHHHHHHHHHHHhhhhhcCCC
Q 041821 530 RHRLLIYEYVEKQSLDKHLFS----S--YFLGWKERFKVALGTAKGLAYLHHDEF 578 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~----~--~~l~~~~~~~i~~~i~~gL~yLH~~~~ 578 (736)
+..++||||+++..+.+.+.. . ..++..++..++.++++.|.-||+-..
T Consensus 106 g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~ 160 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPN 160 (357)
T ss_dssp SSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred CCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence 356899999998887754311 0 135677778899999999999998654
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=93.42 E-value=0.1 Score=55.60 Aligned_cols=100 Identities=14% Similarity=0.031 Sum_probs=60.8
Q ss_pred cccCeeceeEEEEeeeC-CCcEEEEEEeCccc--------ccHHHHHHHHHHHhcCCC--C-ceeeEEEEEEeCCeEEEE
Q 041821 468 EELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH--------QGEEVFWAEVSTIGKIYH--M-NLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~lv 535 (736)
+.||.|.++.||+++.. +++.++||...... ...+.+..|.++|+.+.. + .+.+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 47899999999999754 46889999864321 122446778888887632 3 34456644 44556899
Q ss_pred EecCCCCC-HhhhcccCCCCCHHHHHHHHHHHHHHhhhhh
Q 041821 536 YEYVEKQS-LDKHLFSSYFLGWKERFKVALGTAKGLAYLH 574 (736)
Q Consensus 536 ~e~~~~gs-L~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH 574 (736)
||++++.. +...+.... ... ..+.++++.|+-+|
T Consensus 114 mE~l~g~~~~~~~l~~~~-~~~----~~~~~l~~~La~lH 148 (397)
T 2olc_A 114 MEDLSHLKIARKGLIEGE-NYP----HLSQHIGEFLGKTL 148 (397)
T ss_dssp ECCCTTSEEHHHHHHTTC-CCT----THHHHHHHHHHHHH
T ss_pred EEeCCCcchHHHHHhcCC-cCH----HHHHHHHHHHHHHh
Confidence 99998643 333332221 111 23456667777777
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=92.78 E-value=0.19 Score=50.86 Aligned_cols=93 Identities=25% Similarity=0.263 Sum_probs=63.6
Q ss_pred ccccCeeceeEEEEeeeCCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCC---CceeeEEEEEEeCCeEEEEEecCCCC
Q 041821 467 KEELGRGGSGAVYKGVLADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYH---MNLVRMWGFCSEGRHRLLIYEYVEKQ 542 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~lv~e~~~~g 542 (736)
.+.+|.|..+.||+.+..+|+.+.||+..... .....|..|+..|+.|.- --+.++++. + ..++||||++.+
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~l~~~ 95 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEECCCCC
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEeeccc
Confidence 35689999999999999999999999875432 233457889998887742 224455543 2 247899998754
Q ss_pred CHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC
Q 041821 543 SLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE 577 (736)
Q Consensus 543 sL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~ 577 (736)
.. +... +.++.+.|.-||...
T Consensus 96 ~~----------~~~~----~~~lg~~La~lH~~~ 116 (288)
T 3f7w_A 96 PP----------TPEA----AERFGHQLAAMHLAG 116 (288)
T ss_dssp CC----------CHHH----HHHHHHHHHHHHHTC
T ss_pred CC----------ChHH----HHHHHHHHHhhhhcc
Confidence 32 2222 345667778888754
|
| >2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M* | Back alignment and structure |
|---|
Probab=86.74 E-value=0.65 Score=36.71 Aligned_cols=34 Identities=29% Similarity=0.687 Sum_probs=29.1
Q ss_pred CCCHHHHHHHhhcCCCceeEEeccCCCcceeeeee
Q 041821 310 TVSKEACMKLCLDDCRCSGFSYRLTGQGLCFTKSV 344 (736)
Q Consensus 310 ~~s~~~C~~~Cl~nCsC~Ayay~~~g~~~C~~~~~ 344 (736)
..++++|+..|+.+=.|.||.|. .-..-|++|..
T Consensus 29 ~~sl~~Cq~aC~a~~~C~aFTyN-~~s~~CflKs~ 62 (82)
T 2ll3_A 29 ASSLSECRARCQAEKECSHYTYN-VKSGLCYPKRG 62 (82)
T ss_dssp CSSHHHHHHHHHHCTTEEEEEEE-TTTTEEEEEES
T ss_pred CCCHHHHHHHhhccCCCCeEEec-cCCCceEcccC
Confidence 46899999999999999999996 44568998864
|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.92 E-value=0.83 Score=31.30 Aligned_cols=25 Identities=24% Similarity=0.422 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccCC
Q 041821 412 ALAIGAIEVFVIASGWWLLFRRQDV 436 (736)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (736)
+++.++++++++++++|++.|||+.
T Consensus 16 gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 16 GMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 3333344444444555555444443
|
| >2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.02 E-value=1 Score=30.80 Aligned_cols=20 Identities=10% Similarity=0.316 Sum_probs=9.1
Q ss_pred HHHHHHHHHHhhhhhhccCC
Q 041821 417 AIEVFVIASGWWLLFRRQDV 436 (736)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~ 436 (736)
+++++++++++|++.|||+.
T Consensus 20 v~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 20 LFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHhhhhhh
Confidence 33344444554555444443
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=83.97 E-value=1.3 Score=46.69 Aligned_cols=98 Identities=18% Similarity=0.234 Sum_probs=60.4
Q ss_pred ccCeeceeEEEEeeeC--------CCcEEEEEEeCcccccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEEEEecC
Q 041821 469 ELGRGGSGAVYKGVLA--------DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 469 ~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
.|..|-...+|+.... +++.+++|+............+|.++++.+. +.-..++++++.+ .+||||+
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i 132 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYI 132 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEe
Confidence 4666777788998864 2478999987443334555678999988874 2223566666543 2999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF 578 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~ 578 (736)
++..|..-- +.. ..+..++++.|+-||+-+.
T Consensus 133 ~G~~l~~~~-----l~~---p~~~~~ia~~La~LH~~~~ 163 (379)
T 3feg_A 133 PSRPLKTQE-----LRE---PVLSAAIATKMAQFHGMEM 163 (379)
T ss_dssp SEEECCGGG-----GGC---HHHHHHHHHHHHHHHTCCC
T ss_pred cCccCChhH-----hCC---HHHHHHHHHHHHHHhCCCC
Confidence 976554211 110 2466789999999998654
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=82.84 E-value=1.9 Score=44.27 Aligned_cols=93 Identities=18% Similarity=0.218 Sum_probs=55.1
Q ss_pred ccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCC-----CCceeeEE-E--EEEeCCeEEEEEecCC
Q 041821 469 ELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-----HMNLVRMW-G--FCSEGRHRLLIYEYVE 540 (736)
Q Consensus 469 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~-~--~~~~~~~~~lv~e~~~ 540 (736)
.|+.|..+.||+....++ .+++|+.... ...+..|+.+++.|. .|.++... | +....+..+++|||++
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~ 114 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIE 114 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeec
Confidence 466677889999987554 5899998753 233344555555442 34444311 1 1234677899999999
Q ss_pred CCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC
Q 041821 541 KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD 576 (736)
Q Consensus 541 ~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~ 576 (736)
+..+.. .+. ..+.++++.|+-||..
T Consensus 115 G~~~~~-------~~~----~~~~~~g~~La~lH~~ 139 (346)
T 2q83_A 115 GRPFEL-------TVK----QDLEFIMKGLADFHTA 139 (346)
T ss_dssp CBCCCT-------TSH----HHHHHHHHHHHHHHHH
T ss_pred CccCCC-------CCH----HHHHHHHHHHHHHHHh
Confidence 866541 122 2357788888888864
|
| >3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A | Back alignment and structure |
|---|
Probab=82.81 E-value=0.16 Score=55.24 Aligned_cols=61 Identities=8% Similarity=-0.008 Sum_probs=20.0
Q ss_pred hcccccCeeceeEEEEeeeCC-CcEEEE------EEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEe
Q 041821 465 SFKEELGRGGSGAVYKGVLAD-GRAVAV------KRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE 528 (736)
Q Consensus 465 ~~~~~lG~G~fg~Vy~~~~~~-~~~vav------K~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 528 (736)
.+.++|| ||.||+|.+.. ..+||| |..+... +....+.+|..+++.++|||+++.+++...
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 5567787 99999999754 468888 7665422 233467889999999999999999887654
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=82.05 E-value=1.7 Score=44.51 Aligned_cols=95 Identities=13% Similarity=0.068 Sum_probs=61.5
Q ss_pred ccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCC--ceeeEEEE-----EEeCCeEEEEEecCCC
Q 041821 469 ELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM--NLVRMWGF-----CSEGRHRLLIYEYVEK 541 (736)
Q Consensus 469 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~-----~~~~~~~~lv~e~~~~ 541 (736)
.|+ |....||+....+|+.+++|...........+..|..++..+... .+.+++.. ...++..+++||++++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 356 777899998877777899999864333455667788887776421 23334332 2235567899999987
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH 575 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~ 575 (736)
..+.. .+. ..+.++++.|.-||.
T Consensus 112 ~~~~~-------~~~----~~~~~~g~~La~lH~ 134 (328)
T 1zyl_A 112 RQFEA-------DNI----DQMEAVGRYLGRMHQ 134 (328)
T ss_dssp EECCS-------SCH----HHHHHHHHHHHHHHH
T ss_pred CCCCC-------CCH----HHHHHHHHHHHHHHH
Confidence 55431 122 235677778888885
|
| >2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A | Back alignment and structure |
|---|
Probab=80.59 E-value=1.6 Score=29.80 Aligned_cols=21 Identities=24% Similarity=0.496 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHhhhhhhcc
Q 041821 414 AIGAIEVFVIASGWWLLFRRQ 434 (736)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~ 434 (736)
+++++++++++++++++.|||
T Consensus 18 vVGvll~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 18 VVGILLVVVLGVVFGILIKRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhheehh
Confidence 333333344444444444433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 736 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-49 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 1e-47 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-46 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 7e-46 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 9e-46 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 8e-44 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 9e-44 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 3e-43 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 4e-42 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-41 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-41 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-41 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 1e-40 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 2e-40 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 3e-40 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 7e-40 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-39 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 4e-39 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 4e-39 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 4e-38 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 7e-38 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-37 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-37 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 4e-37 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 7e-37 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-35 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 2e-35 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 4e-35 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 2e-34 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 3e-34 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 8e-34 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-33 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-32 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-32 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 3e-32 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 4e-31 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 4e-31 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 5e-30 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-29 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 2e-29 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 3e-29 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 4e-29 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 6e-28 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 9e-28 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 2e-27 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-27 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-27 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 3e-26 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 6e-26 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 1e-25 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 3e-25 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 5e-25 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-24 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 2e-24 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 4e-24 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 6e-22 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 1e-19 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 5e-19 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 7e-19 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 9e-19 | |
| d1dlpa2 | 120 | b.78.1.1 (A:116-235) Fetuin-binding protein Scafet | 4e-17 | |
| d1dlpa2 | 120 | b.78.1.1 (A:116-235) Fetuin-binding protein Scafet | 1e-06 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 9e-17 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 1e-16 | |
| d1dlpa1 | 115 | b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p | 3e-15 | |
| d1kj1a_ | 109 | b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium | 6e-15 | |
| d1kj1a_ | 109 | b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium | 0.002 | |
| d1xd5a_ | 112 | b.78.1.1 (A:) Gastrodianin (antifungal protein) {G | 5e-12 | |
| d1xd5a_ | 112 | b.78.1.1 (A:) Gastrodianin (antifungal protein) {G | 1e-06 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 4e-11 | |
| d1b2pa_ | 119 | b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill | 2e-10 | |
| d1b2pa_ | 119 | b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill | 7e-07 | |
| d1b2pa_ | 119 | b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill | 7e-06 | |
| d1jpca_ | 108 | b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan | 1e-09 | |
| d1jpca_ | 108 | b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan | 0.001 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 172 bits (437), Expect = 2e-49
Identities = 66/285 (23%), Positives = 113/285 (39%), Gaps = 42/285 (14%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDL-HQGEEVFWAEVSTIGKIYH 516
E+ + + +G G G VYKG AV + + Q + F EV + K H
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHH 575
+N++ G+ + ++ ++ E SL HL + +A TA+G+ YLH
Sbjct: 64 VNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 576 ----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA---S 616
++ KI DFGLA + R S S QF Q+ G+ +MAPE
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676
P + + DVY++G+V+ E++ G ++ V
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP-----YSNINNRDQIIFMVG-------------- 223
Query: 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
+ P L K +N + + C+ + R +RP ++ S+
Sbjct: 224 RGYLSPDLS-KVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 167 bits (424), Expect = 1e-47
Identities = 51/275 (18%), Positives = 102/275 (37%), Gaps = 42/275 (15%)
Query: 466 FKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
F +ELG G G V G VA+K + + E+ F E + + H LV+++G
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 526 CSEGRHRLLIYEYVEKQSLDKHL-FSSYFLGWKERFKVALGTAKGLAYLHH--------- 575
C++ R +I EY+ L +L + ++ ++ + + YL
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 127
Query: 576 -------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
D+ K++DFGL++ + + + PE ++K D+++
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186
Query: 629 YGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKF 688
+GV++ E+ G+ + E I + + ++
Sbjct: 187 FGVLMWEIYSL------------GKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY--- 231
Query: 689 NTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723
I SC E +RPT ++ ++L+
Sbjct: 232 ---------TIMYSCWHEKADERPTFKILLSNILD 257
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 164 bits (415), Expect = 2e-46
Identities = 57/275 (20%), Positives = 104/275 (37%), Gaps = 42/275 (15%)
Query: 466 FKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
F +E+G G G V+ G + VA+K + + EE F E + K+ H LV+++G
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLG-WKERFKVALGTAKGLAYLHH--------- 575
C E L++E++E L +L + L + + L +G+AYL
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA 128
Query: 576 -------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
+ K++DFG+ + + + + + +PE S ++K DV+S
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 629 YGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKF 688
+GV++ E+ ++ R EV I + + +
Sbjct: 188 FGVLMWEVFSEGKIPYE------------NRSNSEVVEDISTGFRLYKPRLASTHVY--- 232
Query: 689 NTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723
I C E RP +++ L E
Sbjct: 233 ---------QIMNHCWKERPEDRPAFSRLLRQLAE 258
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 162 bits (412), Expect = 7e-46
Identities = 68/290 (23%), Positives = 111/290 (38%), Gaps = 44/290 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T E LG G G V+ G VAVK L + F AE + + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLAYLH- 574
LVR++ ++ +I EY+E SL L S L + +A A+G+A++
Sbjct: 69 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 575 ---------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
D KIADFGLA+L + + + + + APE +
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGT 186
Query: 620 ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679
T K DV+S+G+++ E+V R+ + + EV + + +
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTN------------PEVIQNLERGYRMVRPDN 234
Query: 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729
L + C E RPT D + L + T +E
Sbjct: 235 CPEELY------------QLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (413), Expect = 9e-46
Identities = 61/304 (20%), Positives = 114/304 (37%), Gaps = 44/304 (14%)
Query: 466 FKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
+E +G+G G V++G G VAVK + AE+ + H N++
Sbjct: 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA 65
Query: 526 CSEGR----HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH------ 575
++ L+ +Y E SL +L + Y + + K+AL TA GLA+LH
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 576 ------------------DEFEPKIADFGLAKLSQRGSNSSQF--SQIRGTKGYMAPEWA 615
IAD GLA +++ + GTK YMAPE
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
Query: 616 S------NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669
+ + D+Y+ G+V E+ + + + Q + + +
Sbjct: 185 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG---IHEDYQLPYYDLVPSDPSVEEM 241
Query: 670 YEEEAWIEEIVDPRLKGKFNTNQAA-TLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728
+ E+ + P + ++ + +A + I C + + R T + ++L + +
Sbjct: 242 R--KVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299
Query: 729 EIHI 732
I +
Sbjct: 300 GIKM 303
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 157 bits (398), Expect = 8e-44
Identities = 63/290 (21%), Positives = 109/290 (37%), Gaps = 44/290 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 13 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 72
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS--SYFLGWKERFKVALGTAKGLAYLHH 575
LV+++ SE ++ EY+ K SL L +L + +A A G+AY+
Sbjct: 73 KLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 131
Query: 576 ----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
+ K+ADFGLA+L + + + + + APE A
Sbjct: 132 MNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 190
Query: 620 ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679
T K DV+S+G+++ E+ G+ REV ++
Sbjct: 191 FTIKSDVWSFGILLTELTTK------------GRVPYPGMVNREVLDQVERGYRMPCPPE 238
Query: 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729
L + C ++ +RPT + + L + T +E
Sbjct: 239 CPESLH------------DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 276
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (400), Expect = 9e-44
Identities = 52/303 (17%), Positives = 100/303 (33%), Gaps = 48/303 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRL--GDLHQGEEVFWAEVSTIGKI 514
ELK ELG G G V+K G +A K + E+ + +
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 515 YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH 574
+V +G + E+++ SLD+ L + + + KV++ KGL YL
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 575 H-----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN 617
E K+ DFG++ S + GT+ YM+PE
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMSPERLQG 177
Query: 618 LPITAKVDVYSYGVVILEMVKGIR---------------------LSNWVVEDGEGQEAE 656
+ + D++S G+ ++EM G +
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237
Query: 657 LKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDS 716
+ ++E +I P+L + + + C+ ++ ++R +
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN---KCLIKNPAERADLKQ 294
Query: 717 VVQ 719
++
Sbjct: 295 LMV 297
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 156 bits (394), Expect = 3e-43
Identities = 58/308 (18%), Positives = 117/308 (37%), Gaps = 61/308 (19%)
Query: 454 FSYAELKKSTKSFKEE-----------LGRGGSGAVYKGVLA----DGRAVAVKRL--GD 496
F++ + ++ + F +E +G G G V G L VA+K L G
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 497 LHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-FLG 555
+ F +E S +G+ H N++ + G ++ ++I E++E SLD L +
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 126
Query: 556 WKERFKVALGTAKGLAYLHH----------------DEFEPKIADFGLAKLSQRGSNSSQ 599
+ + G A G+ YL K++DFGL++ + ++
Sbjct: 127 VIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 186
Query: 600 FSQ---IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAE 656
++ + + APE T+ DV+SYG+V+ E++ W + + +
Sbjct: 187 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD----- 241
Query: 657 LKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDS 716
+ ++ + + + L + + C +DR+ RP
Sbjct: 242 -------------------VINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQ 282
Query: 717 VVQSLLEC 724
+V +L +
Sbjct: 283 IVNTLDKM 290
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 152 bits (385), Expect = 4e-42
Identities = 58/292 (19%), Positives = 112/292 (38%), Gaps = 44/292 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 13 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 72
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLH 574
NLV++ G C+ +I E++ +L +L + +A + + YL
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 132
Query: 575 H----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
+ K+ADFGL++L G + + + + APE +
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYN 191
Query: 619 PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678
+ K DV+++GV++ E+ + + + E
Sbjct: 192 KFSIKSDVWAFGVLLWEIATYGMSPYP------------------------GIDLSQVYE 227
Query: 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEI 730
+++ + + + + +C + S RP+ + Q+ ES I
Sbjct: 228 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 279
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 150 bits (380), Expect = 1e-41
Identities = 60/280 (21%), Positives = 109/280 (38%), Gaps = 50/280 (17%)
Query: 466 FKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
+ +G+G G V G G VAVK + + F AE S + ++ H NLV++ G
Sbjct: 11 LLQTIGKGEFGDVMLGDY-RGNKVAVKCI-KNDATAQAFLAEASVMTQLRHSNLVQLLGV 68
Query: 526 CSEGRHRL-LIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHH------- 575
E + L ++ EY+ K SL +L S LG K +L + + YL
Sbjct: 69 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 128
Query: 576 ---------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
++ K++DFGL K + SS + + APE + K DV
Sbjct: 129 LAARNVLVSEDNVAKVSDFGLTKEA-----SSTQDTGKLPVKWTAPEALREKKFSTKSDV 183
Query: 627 YSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKG 686
+S+G+++ E+ G+ + +++V ++ + + P +
Sbjct: 184 WSFGILLWEIYSF------------GRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY- 230
Query: 687 KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726
+ +C D + RP+ + + L +T
Sbjct: 231 -----------EVMKNCWHLDAAMRPSFLQLREQLEHIKT 259
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 151 bits (381), Expect = 1e-41
Identities = 60/276 (21%), Positives = 98/276 (35%), Gaps = 48/276 (17%)
Query: 469 ELGRGGSGAVYKGVLAD---GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRM 522
ELG G G V KG + VAVK L + + AE + + ++ + +VRM
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH------- 575
G C E +L+ E E L+K+L + + K ++ + G+ YL
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 132
Query: 576 ---------DEFEPKIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVD 625
+ KI+DFGL+K L + + + + APE + ++K D
Sbjct: 133 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 192
Query: 626 VYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685
V+S+GV++ E GQ+ EV + E +
Sbjct: 193 VWSFGVLMWEAFS------------YGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY 240
Query: 686 GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
+ C D RP +V L
Sbjct: 241 ------------DLMNLCWTYDVENRPGFAAVELRL 264
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 151 bits (381), Expect = 2e-41
Identities = 69/314 (21%), Positives = 107/314 (34%), Gaps = 66/314 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRL--GDLHQGEEVFWAEVS 509
E ++ SF + LG G G V + VAVK L E +E+
Sbjct: 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 78
Query: 510 TIGKIY-HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS------------------ 550
+ + HMN+V + G C+ G L+I EY L L
Sbjct: 79 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138
Query: 551 SYFLGWKERFKVALGTAKGLAYLHH----------------DEFEPKIADFGLAKLSQRG 594
L ++ + AKG+A+L KI DFGLA+ +
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQE 654
SN R +MAPE N T + DV+SYG+ + E+
Sbjct: 199 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG-------- 250
Query: 655 AELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM 714
++ +++ + + A + I +C D D KRPT
Sbjct: 251 ---------------MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTF 295
Query: 715 DSVVQSLLECETES 728
+VQ + + +ES
Sbjct: 296 KQIVQLIEKQISES 309
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 148 bits (375), Expect = 1e-40
Identities = 63/290 (21%), Positives = 100/290 (34%), Gaps = 49/290 (16%)
Query: 459 LKKSTKSFKE-ELGRGGSGAVYKGVLA---DGRAVAVKRL--GDLHQGEEVFWAEVSTIG 512
LK+ + ELG G G+V +GV VA+K L G E E +
Sbjct: 5 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMH 64
Query: 513 KIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLA 571
++ + +VR+ G C + +L+ E L K L + ++ + G+
Sbjct: 65 QLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMK 123
Query: 572 YLHH----------------DEFEPKIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEW 614
YL + KI+DFGL+K L S + S + + APE
Sbjct: 124 YLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 183
Query: 615 ASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674
+ +++ DV+SYGV + E + GQ+ K EV I +
Sbjct: 184 INFRKFSSRSDVWSYGVTMWEAL------------SYGQKPYKKMKGPEVMAFIEQGKRM 231
Query: 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724
P L + C RP +V Q + C
Sbjct: 232 ECPPECPPELY------------ALMSDCWIYKWEDRPDFLTVEQRMRAC 269
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 148 bits (373), Expect = 2e-40
Identities = 62/289 (21%), Positives = 116/289 (40%), Gaps = 49/289 (16%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADG-----RAVAVKRL--GDLHQGEEVFWAEVST 510
E+ S + ++ +G G G VYKG+L VA+K L G + F E
Sbjct: 3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 62
Query: 511 IGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKG 569
+G+ H N++R+ G S+ + ++I EY+E +LDK L + + G A G
Sbjct: 63 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 122
Query: 570 LAYLHH----------------DEFEPKIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAP 612
+ YL + K++DFGL++ L + S + + AP
Sbjct: 123 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 182
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672
E S T+ DV+S+G+V+ E++ W + + E
Sbjct: 183 EAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--------------------- 221
Query: 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
+ + ++ + + + + + + C ++R++RP +V L
Sbjct: 222 ---VMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 267
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 148 bits (373), Expect = 3e-40
Identities = 58/304 (19%), Positives = 102/304 (33%), Gaps = 72/304 (23%)
Query: 466 FKEELGRGGSGAVYKGVL------ADGRAVAVKRL--GDLHQGEEVFWAEVSTIGKIYHM 517
+ ++G G G V++ VAVK L + F E + + + +
Sbjct: 17 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 76
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS------------------------SYF 553
N+V++ G C+ G+ L++EY+ L++ L S
Sbjct: 77 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 136
Query: 554 LGWKERFKVALGTAKGLAYLHH----------------DEFEPKIADFGLAKLSQRGSNS 597
L E+ +A A G+AYL + KIADFGL++
Sbjct: 137 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 196
Query: 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAEL 657
+M PE T + DV++YGVV+ E+ + E+
Sbjct: 197 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY-----GMAHEEV 251
Query: 658 KRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSV 717
+VR+ E E+ + + C + + RP+ S+
Sbjct: 252 IYYVRDGNILACPEN--CPLELYN-----------------LMRLCWSKLPADRPSFCSI 292
Query: 718 VQSL 721
+ L
Sbjct: 293 HRIL 296
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (368), Expect = 7e-40
Identities = 58/281 (20%), Positives = 96/281 (34%), Gaps = 55/281 (19%)
Query: 466 FKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVR 521
F E+GRG VYKG+ + VA L D + F E + + H N+VR
Sbjct: 13 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR 72
Query: 522 MWGFC----SEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH-- 575
+ + +L+ E + +L +L + K KGL +LH
Sbjct: 73 FYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT 132
Query: 576 -----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
KI D GLA L + +S + GT +MAPE
Sbjct: 133 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR----ASFAKAVIGTPEFMAPEMYEE- 187
Query: 619 PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678
VDVY++G+ +LEM + +Y +
Sbjct: 188 KYDESVDVYAFGMCMLEMATSEYP-----------------YSECQNAAQIYR---RVTS 227
Query: 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
V P K + +I C+ +++ +R ++ ++
Sbjct: 228 GVKPASFDKVAIPEVKEII---EGCIRQNKDERYSIKDLLN 265
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 145 bits (368), Expect = 2e-39
Identities = 58/276 (21%), Positives = 95/276 (34%), Gaps = 54/276 (19%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRL----GDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
E+G G GAVY + + VA+K++ ++ + EV + K+ H N ++
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH------- 575
G L+ EY + D L E V G +GLAYLH
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 140
Query: 576 ---------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL---PITAK 623
+ K+ DFG A + + GT +MAPE + K
Sbjct: 141 VKAGNILLSEPGLVKLGDFGSASIMAPA------NSFVGTPYWMAPEVILAMDEGQYDGK 194
Query: 624 VDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683
VDV+S G+ +E+ + LY I + P
Sbjct: 195 VDVWSLGITCIELAERKPP-----------------LFNMNAMSALYH----IAQNESPA 233
Query: 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
L+ + + SC+ + RPT + +++
Sbjct: 234 LQSGHWSEYFRNFV---DSCLQKIPQDRPTSEVLLK 266
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (362), Expect = 4e-39
Identities = 58/274 (21%), Positives = 97/274 (35%), Gaps = 43/274 (15%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
+ LG G G V V AVAVK + E E+ + H N+V+
Sbjct: 9 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 68
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH------- 575
+G EG + L EY L + + + + G+ YLH
Sbjct: 69 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 128
Query: 576 ---------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPI-TAKVD 625
+ KI+DFGLA + + + +++ GT Y+APE VD
Sbjct: 129 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 188
Query: 626 VYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685
V+S G+V+ M+ G + Q ++ + + K K Y + +D
Sbjct: 189 VWSCGIVLTAMLAGELPWD--------QPSDSCQEYSDWKEKKTYLN---PWKKIDSAPL 237
Query: 686 GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
L+ + E+ S R T+ + +
Sbjct: 238 ---------ALL---HKILVENPSARITIPDIKK 259
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (365), Expect = 4e-39
Identities = 59/282 (20%), Positives = 98/282 (34%), Gaps = 50/282 (17%)
Query: 466 FKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L D AVK L + EV F E + H N+
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 520 VRMWGFCSEGR-HRLLIYEYVEKQSLDKHLF-SSYFLGWKERFKVALGTAKGLAYLHH-- 575
+ + G C L++ Y++ L + ++ K+ L AKG+ +L
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 150
Query: 576 --------------DEFEPKIADFGLAKL--SQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
++F K+ADFGLA+ + + + + +MA E
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 210
Query: 620 ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679
T K DV+S+GV++ E++ G ++ +L E
Sbjct: 211 FTTKSDVWSFGVLLWELMTR------------GAPPYPDVNTFDITVYLLQGRRLLQPEY 258
Query: 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
L + + C RP+ +V +
Sbjct: 259 CPDPLY------------EVMLKCWHPKAEMRPSFSELVSRI 288
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (354), Expect = 4e-38
Identities = 58/275 (21%), Positives = 95/275 (34%), Gaps = 51/275 (18%)
Query: 466 FKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLV 520
LG+G G VY +A+K L E EV + H N++
Sbjct: 10 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 69
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH----- 575
R++G+ + LI EY ++ + L + A L+Y H
Sbjct: 70 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 129
Query: 576 -----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
E KIADFG + + SS+ + + GT Y+ PE KV
Sbjct: 130 RDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEMIEGRMHDEKV 185
Query: 625 DVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRL 684
D++S GV+ E + G +E ++I E + + +
Sbjct: 186 DLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRISRVEFTFPDFV----- 227
Query: 685 KGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
T A LI + + S+RP + V++
Sbjct: 228 -----TEGARDLI---SRLLKHNPSQRPMLREVLE 254
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (357), Expect = 7e-38
Identities = 65/316 (20%), Positives = 99/316 (31%), Gaps = 72/316 (22%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLHQGEEV--FWAEVS 509
E + F + LG G G V VAVK L + E +E+
Sbjct: 33 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 92
Query: 510 TIGKIY-HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS----------------- 551
+ ++ H N+V + G C+ LI+EY L +L S
Sbjct: 93 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 152
Query: 552 ------YFLGWKERFKVALGTAKGLAYLHH----------------DEFEPKIADFGLAK 589
L +++ A AKG+ +L KI DFGLA+
Sbjct: 153 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLAR 212
Query: 590 LSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVED 649
SN R +MAPE T K DV+SYG+++ E+
Sbjct: 213 DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG--- 269
Query: 650 GEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRS 709
+A +++ K + I SC D
Sbjct: 270 --------------------IPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSR 309
Query: 710 KRPTMDSVVQSLLECE 725
KRP+ ++ L C+
Sbjct: 310 KRPSFPNLTS-FLGCQ 324
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 139 bits (352), Expect = 1e-37
Identities = 59/286 (20%), Positives = 97/286 (33%), Gaps = 50/286 (17%)
Query: 466 FKEELGRGGSGAVYKGVL----ADGRAVAVKRL----GDLHQGEEVFWAEVSTIGKIYHM 517
E+LG G G V +G +VAVK L + + F EV+ + + H
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHH- 575
NL+R++G + ++ E SL L + A+ A+G+ YL
Sbjct: 72 NLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 576 ---------------DEFEPKIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
KI DFGL + L Q + + + APE
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 620 ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679
+ D + +GV + EM + G L + +E +R L E ++I
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQEP----WIGLNGSQILHKIDKEGER--LPRPEDCPQDI 244
Query: 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725
+ + + C RPT ++ LLE +
Sbjct: 245 YN-----------------VMVQCWAHKPEDRPTFVALRDFLLEAQ 273
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (354), Expect = 1e-37
Identities = 57/300 (19%), Positives = 97/300 (32%), Gaps = 47/300 (15%)
Query: 459 LKKSTKSFKEELGRGGSGAVYKGVLAD-----GRAVAVKRL--GDLHQGEEVFWAEVSTI 511
LK++ + LG G G VYKG+ VA+K L + + E +
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 65
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLA 571
+ + ++ R+ G C +L+ LD +G + + AKG+
Sbjct: 66 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 125
Query: 572 YL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
YL H D KI DFGLAKL + +MA E
Sbjct: 126 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 616 SNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675
+ T + DV+SYGV + E++ + E
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------------------------ 221
Query: 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEIHITDD 735
I I++ + + I + C D RP ++ + + + ++
Sbjct: 222 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQ 281
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 139 bits (350), Expect = 4e-37
Identities = 61/325 (18%), Positives = 109/325 (33%), Gaps = 70/325 (21%)
Query: 449 SQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLADG---RAVAVKRLGDL--HQGEEV 503
+ + + ++K F++ +G G G V K + A+KR+ +
Sbjct: 2 TIYPVLDWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD 56
Query: 504 FWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYF--------- 553
F E+ + K+ H N++ + G C + L EY +L L S
Sbjct: 57 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 116
Query: 554 -------LGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKL 590
L ++ A A+G+ YL H D + KIADFGL++
Sbjct: 117 ANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG 176
Query: 591 SQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDG 650
+ + R +MA E + T DV+SYGV++ E+V
Sbjct: 177 QEVYVKKTMG---RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC----- 228
Query: 651 EGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSK 710
A + E + + + N + + C E +
Sbjct: 229 -------------------GMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYE 269
Query: 711 RPTMDSVVQSLLECETESEIHITDD 735
RP+ ++ SL E + ++
Sbjct: 270 RPSFAQILVSLNRMLEERKTYVNTT 294
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (346), Expect = 7e-37
Identities = 51/285 (17%), Positives = 100/285 (35%), Gaps = 58/285 (20%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL--GDLHQGE-EVFWAEVSTIGKIYHMNLVR 521
+G G G K +DG+ + K L G + + E ++ +EV+ + ++ H N+VR
Sbjct: 8 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 67
Query: 522 MWGFCSE--GRHRLLIYEYVEKQSLDKHLFSSY----FLGWKERFKVALGTAKGLAYLHH 575
+ + ++ EY E L + +L + +V L H
Sbjct: 68 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 127
Query: 576 ---------------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW 614
+ K+ DFGLA++ ++S GT YM+PE
Sbjct: 128 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVGTPYYMSPEQ 185
Query: 615 ASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674
+ + K D++S G ++ E+ + Q+ E+ KI +
Sbjct: 186 MNRMSYNEKSDIWSLGCLLYELCALMPPF-----TAFSQK--------ELAGKIREGKFR 232
Query: 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
I L +I ++ RP+++ +++
Sbjct: 233 RIPYRYSDELN---------EII---TRMLNLKDYHRPSVEEILE 265
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 134 bits (338), Expect = 2e-35
Identities = 59/301 (19%), Positives = 112/301 (37%), Gaps = 58/301 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRL--GDLHQGEEVFWAEVS 509
E+ + + ELG+G G VY+GV VA+K + + F E S
Sbjct: 16 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 75
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYF----------LGWKER 559
+ + ++VR+ G S+G+ L+I E + + L +L S +
Sbjct: 76 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 135
Query: 560 FKVALGTAKGLAYLHH----------------DEFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL+ ++F KI DFG+ + + +
Sbjct: 136 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 195
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVRE 663
+M+PE + T DV+S+GVV+ E+ ++ RFV
Sbjct: 196 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-----GLSNEQVLRFV-- 248
Query: 664 VKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723
++ +L + + + + + + C + RP+ ++ S+ E
Sbjct: 249 MEGGLLDKPDNCPDMLFE-----------------LMRMCWQYNPKMRPSFLEIISSIKE 291
Query: 724 C 724
Sbjct: 292 E 292
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 133 bits (336), Expect = 2e-35
Identities = 53/270 (19%), Positives = 100/270 (37%), Gaps = 44/270 (16%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLG-DLHQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
E++G+G SG VY + +A G+ VA++++ +E+ E+ + + + N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH---------- 575
G ++ EY+ SL + + + V + L +LH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCM-DEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144
Query: 576 ------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSY 629
+ K+ DFG S+ S + GT +MAPE + KVD++S
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 630 GVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFN 689
G++ +EM++G E L ++ E+
Sbjct: 203 GIMAIEMIEGEPPY-----LNENPLRALYLIATNGTPELQNPEKL--------------- 242
Query: 690 TNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
+ + C+D D KR + ++Q
Sbjct: 243 SAIFRDFL---NRCLDMDVEKRGSAKELLQ 269
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (334), Expect = 4e-35
Identities = 52/278 (18%), Positives = 95/278 (34%), Gaps = 49/278 (17%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL-GDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
ELG G G VYK A K + + E + E+ + H N+V++
Sbjct: 16 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 75
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHH------- 575
+ ++ E+ ++D + L + V T L YLH
Sbjct: 76 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRD 135
Query: 576 ---------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA-----SNLPIT 621
+ + K+ADFG++ + R + GT +MAPE + P
Sbjct: 136 LKAGNILFTLDGDIKLADFGVSAKNTR--TIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 193
Query: 622 AKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681
K DV+S G+ ++EM + + E + + + + L + W D
Sbjct: 194 YKADVWSLGITLIEMAEIEPPHH------ELNPMRVLLKIAKSEPPTLAQPSRWSSNFKD 247
Query: 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
+ C++++ R T ++Q
Sbjct: 248 --------------FL---KKCLEKNVDARWTTSQLLQ 268
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (327), Expect = 2e-34
Identities = 58/287 (20%), Positives = 99/287 (34%), Gaps = 49/287 (17%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRL--GDLHQGEEVFWAEVSTI 511
E+++ +G G G V++G+ AVA+K E F E T+
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYF-LGWKERFKVALGTAKGL 570
+ H ++V++ G +E +I E L L + L A + L
Sbjct: 63 RQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 121
Query: 571 AYLHH----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW 614
AYL K+ DFGL++ + S + S+ + +MAPE
Sbjct: 122 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPES 180
Query: 615 ASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674
+ T+ DV+ +GV + E++ G + +V +I E
Sbjct: 181 INFRRFTSASDVWMFGVCMWEILMH------------GVKPFQGVKNNDVIGRIENGERL 228
Query: 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
+ P L +L+ C D S+RP + L
Sbjct: 229 PMPPNCPPTLY---------SLM---TKCWAYDPSRRPRFTELKAQL 263
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (327), Expect = 3e-34
Identities = 67/306 (21%), Positives = 114/306 (37%), Gaps = 65/306 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGV------LADGRAVAVKRL--GDLHQGEEVFWAEVS 509
E + + LGRG G V + A R VAVK L G H +E+
Sbjct: 9 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 68
Query: 510 TIGKI-YHMNLVRMWGFCSE-GRHRLLIYEYVEKQSLDKHLFS----------------S 551
+ I +H+N+V + G C++ G ++I E+ + +L +L S
Sbjct: 69 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 128
Query: 552 YFLGWKERFKVALGTAKGLAYLHH----------------DEFEPKIADFGLAKLSQRGS 595
FL + + AKG+ +L ++ KI DFGLA+ +
Sbjct: 129 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 188
Query: 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEA 655
+ + R +MAPE + T + DV+S+GV++ E+ G +
Sbjct: 189 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL----GASPYPGVKIDE 244
Query: 656 ELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMD 715
E R ++E R + + E+ + C + S+RPT
Sbjct: 245 EFCRRLKEGTR--MRAPDYTTPEMYQ-----------------TMLDCWHGEPSQRPTFS 285
Query: 716 SVVQSL 721
+V+ L
Sbjct: 286 ELVEHL 291
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 129 bits (325), Expect = 8e-34
Identities = 57/276 (20%), Positives = 98/276 (35%), Gaps = 47/276 (17%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
F++ LG G V + VA+K + L E E++ + KI H N+V +
Sbjct: 13 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVAL 72
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH------- 575
G H LI + V L + F ++ ++ + YLH
Sbjct: 73 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRD 132
Query: 576 ------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK 623
++ + I+DFGL+K+ GS S GT GY+APE + P +
Sbjct: 133 LKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA---CGTPGYVAPEVLAQKPYSKA 189
Query: 624 VDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683
VD +S GV+ ++ G E ++ ++ + + D
Sbjct: 190 VDCWSIGVIAYILLCGYPPF-----YDENDAKLFEQILKAEYEFDSPYWDDISDSAKD-- 242
Query: 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
I +++D KR T + +Q
Sbjct: 243 ------------FI---RHLMEKDPEKRFTCEQALQ 263
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 129 bits (326), Expect = 2e-33
Identities = 54/275 (19%), Positives = 94/275 (34%), Gaps = 46/275 (16%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL-GDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
EELG G G V++ A G A K + +E E+ T+ + H LV +
Sbjct: 30 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 89
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYF-LGWKERFKVALGTAKGLAYLH-------- 574
+ ++IYE++ L + + + + E + KGL ++H
Sbjct: 90 DAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLD 149
Query: 575 ----------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
E K+ DFGL + GT + APE A P+
Sbjct: 150 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT---TGTAEFAAPEVAEGKPVGYYT 206
Query: 625 DVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRL 684
D++S GV+ ++ G+ GE + L+ V+ + + I E
Sbjct: 207 DMWSVGVLSYILLSGLSPF-----GGENDDETLRN-VKSCDWNMDDSAFSGISE------ 254
Query: 685 KGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
I + D + R T+ ++
Sbjct: 255 -------DGKDFIR---KLLLADPNTRMTIHQALE 279
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (316), Expect = 1e-32
Identities = 60/307 (19%), Positives = 102/307 (33%), Gaps = 67/307 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL--------ADGRAVAVKRL--GDLHQGEEVFWAE 507
EL + + LG G G V VAVK L + +E
Sbjct: 9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68
Query: 508 VSTIGKIY-HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYF------------- 553
+ + I H N++ + G C++ +I EY K +L ++L +
Sbjct: 69 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 128
Query: 554 ---LGWKERFKVALGTAKGLAYLHH----------------DEFEPKIADFGLAKLSQRG 594
L K+ A A+G+ YL ++ KIADFGLA+
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 188
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQE 654
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 189 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP--------- 239
Query: 655 AELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM 714
+ +++ + +N L + C S+RPT
Sbjct: 240 ---------------GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 284
Query: 715 DSVVQSL 721
+V+ L
Sbjct: 285 KQLVEDL 291
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 2e-32
Identities = 47/271 (17%), Positives = 87/271 (32%), Gaps = 47/271 (17%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL----GDLHQGEEVFWAEVSTIGKIYHMNLV 520
F + LG G V LA R A+K L E + ++ H V
Sbjct: 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 71
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH----- 575
+++ + Y + L K++ L YLH
Sbjct: 72 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIH 131
Query: 576 -----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
++ +I DFG AK+ S ++ + GT Y++PE +
Sbjct: 132 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS 191
Query: 625 DVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRL 684
D+++ G +I ++V G+ + + +KI+ E + E+
Sbjct: 192 DLWALGCIIYQLVAGLPPF-----RAGNEY--------LIFQKIIKLEYDFPEKF----- 233
Query: 685 KGKFNTNQAATLIGIGISCVDEDRSKRPTMD 715
+A L+ + D +KR +
Sbjct: 234 -----FPKARDLVE---KLLVLDATKRLGCE 256
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (315), Expect = 3e-32
Identities = 50/274 (18%), Positives = 103/274 (37%), Gaps = 45/274 (16%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
E+LGRG G V++ V + + K + + + E+S + H N++ +
Sbjct: 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHE 68
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYF-LGWKERFKVALGTAKGLAYLH-----HDEF 578
++I+E++ + + + +S F L +E + L +LH H +
Sbjct: 69 SFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDI 128
Query: 579 EP-------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVD 625
P KI +FG A+ + G N F + Y APE + ++ D
Sbjct: 129 RPENIIYQTRRSSTIKIIEFGQARQLKPGDN---FRLLFTAPEYYAPEVHQHDVVSTATD 185
Query: 626 VYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLK 685
++S G ++ ++ GI E + ++ + + ++EEA+ E +
Sbjct: 186 MWSLGTLVYVLLSGINPF-----LAETNQQIIENIMNA---EYTFDEEAFKE--ISIEAM 235
Query: 686 GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
+ + ++R R T +Q
Sbjct: 236 ---------DFVD---RLLVKERKSRMTASEALQ 257
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 122 bits (308), Expect = 4e-31
Identities = 47/275 (17%), Positives = 93/275 (33%), Gaps = 46/275 (16%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL-GDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
EELG G G V++ V A GR K + + E+S + +++H L+ +
Sbjct: 33 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLH 92
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYF-LGWKERFKVALGTAKGLAYLH-------- 574
+ +LI E++ L + + + + E +GL ++H
Sbjct: 93 DAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLD 152
Query: 575 ----------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
KI DFGLA T + APE P+
Sbjct: 153 IKPENIMCETKKASSVKIIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREPVGFYT 209
Query: 625 DVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRL 684
D+++ GV+ ++ G+ + E + V+ + + + +
Sbjct: 210 DMWAIGVLGYVLLSGLSPFA------GEDDLETLQNVKRCDWEFDEDAFSSVSP------ 257
Query: 685 KGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
+A I + + ++ KR T+ ++
Sbjct: 258 -------EAKDFI---KNLLQKEPRKRLTVHDALE 282
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 120 bits (303), Expect = 4e-31
Identities = 53/288 (18%), Positives = 101/288 (35%), Gaps = 59/288 (20%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL----------GDLHQGEEVFWAEVSTIGKI 514
KE LGRG S V + + + AVK + ++ + E EV + K+
Sbjct: 7 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 66
Query: 515 -YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
H N++++ L+++ ++K L +L L KE K+ + + L
Sbjct: 67 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICAL 126
Query: 574 HH----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS- 616
H D+ K+ DFG + G + ++ GT Y+APE
Sbjct: 127 HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG---EKLREVCGTPSYLAPEIIEC 183
Query: 617 -----NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671
+ +VD++S GV++ ++ G Q L+ + + E
Sbjct: 184 SMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF-----WHRKQMLMLRMIMSGNYQFGSPE 238
Query: 672 EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
+ + + + D L+ + KR T + +
Sbjct: 239 WDDYSDTVKD--------------LVS---RFLVVQPQKRYTAEEALA 269
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 118 bits (295), Expect = 5e-30
Identities = 55/278 (19%), Positives = 104/278 (37%), Gaps = 31/278 (11%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMWG 524
E++G G G VYK G A+K++ + E + E+S + ++ H N+V+++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH--------- 575
+ +L++E++++ L L G+AY H
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 576 -------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAKVDVY 627
E E KIADFGLA+ G +++ T Y AP+ + + +D++
Sbjct: 128 PQNLLINREGELKIADFGLAR--AFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 628 SYGVVILEMVKGIRL------SNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681
S G + EMV G L ++ ++ + V Y+ + E +
Sbjct: 186 SVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLP 245
Query: 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
K L+ + D ++R T ++
Sbjct: 246 WESFLKGLDESGIDLLS---KMLKLDPNQRITAKQALE 280
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (291), Expect = 2e-29
Identities = 57/301 (18%), Positives = 101/301 (33%), Gaps = 70/301 (23%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL-------GDLHQGEEVFWAEVSTIGKI--Y 515
LG GG G+VY G+ ++D VA+K + EV + K+
Sbjct: 8 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 516 HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYL- 573
++R+ + +LI E E + L + + + +
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 574 -----HHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN 617
H D E K+ DFG L + ++ GT+ Y PEW
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEWIRY 183
Query: 618 LP-ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676
V+S G+++ +MV G I +E +
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCG---------------------------DIPFEHD--- 213
Query: 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSV-----VQSLLECETESEIH 731
EEI+ ++ F ++ + C+ S RPT + + +Q +L + +EIH
Sbjct: 214 EEIIRGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIH 271
Query: 732 I 732
+
Sbjct: 272 L 272
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (293), Expect = 2e-29
Identities = 44/196 (22%), Positives = 72/196 (36%), Gaps = 24/196 (12%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL----GDLHQGEEVFWAEVSTIGKIY-HMNL 519
+ LG+G G V+ + A+K L + E E + + H L
Sbjct: 6 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 65
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL------ 573
M+ + + EY+ L H+ S + A GL +L
Sbjct: 66 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIV 125
Query: 574 HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK 623
+ D + KIADFG+ K + ++ + GT Y+APE
Sbjct: 126 YRDLKLDNILLDKDGHIKIADFGMCKENM--LGDAKTNTFCGTPDYIAPEILLGQKYNHS 183
Query: 624 VDVYSYGVVILEMVKG 639
VD +S+GV++ EM+ G
Sbjct: 184 VDWWSFGVLLYEMLIG 199
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 115 bits (289), Expect = 3e-29
Identities = 58/284 (20%), Positives = 104/284 (36%), Gaps = 49/284 (17%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL-GDLHQGEEV---FWAEVSTIGKIYHMNLV 520
E LG GG V+ L R VAVK L DL + F E + H +V
Sbjct: 11 LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 70
Query: 521 RMWGFC----SEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH- 575
++ G ++ EYV+ +L + + + K +V + L + H
Sbjct: 71 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN 130
Query: 576 ---------------DEFEPKIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
K+ DFG+A+ ++ G++ +Q + + GT Y++PE A
Sbjct: 131 GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 190
Query: 620 ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679
+ A+ DVYS G V+ E++ G G+ + + VRE E ++
Sbjct: 191 VDARSDVYSLGCVLYEVLTGEPPF-----TGDSPVSVAYQHVREDPIPPSARHEGLSADL 245
Query: 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-TMDSVVQSLL 722
++ + + ++ R T + L+
Sbjct: 246 DA--------------VV---LKALAKNPENRYQTAAEMRADLV 272
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (290), Expect = 4e-29
Identities = 52/283 (18%), Positives = 95/283 (33%), Gaps = 38/283 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGE------EVFWAEVSTIGKIYHMNLV 520
+ LG G VYK + VA+K++ H+ E E+ + ++ H N++
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH----- 575
+ + L+++++E +S L L T +GL YLH
Sbjct: 64 GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 123
Query: 576 -----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL-PITAK 623
+ K+ADFGLAK GS + ++ T+ Y APE
Sbjct: 124 RDLKPNNLLLDENGVLKLADFGLAK--SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVG 181
Query: 624 VDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683
VD+++ G ++ E++ + G+ +L R + +
Sbjct: 182 VDMWAVGCILAELLLRVPFL-----PGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 236
Query: 684 LKGKFNTNQAATLIGIGISCVD-------EDRSKRPTMDSVVQ 719
K G +D + R T ++
Sbjct: 237 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 113 bits (284), Expect = 6e-28
Identities = 46/200 (23%), Positives = 73/200 (36%), Gaps = 29/200 (14%)
Query: 465 SFKEELGRGGSGAVYKGVLAD-GRAVAVKRL----GDLHQGEEVFWAEV---STIGKIYH 516
S +GRGG G VY AD G+ A+K L + QGE + E S +
Sbjct: 7 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC 66
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH- 575
+V M I + + L HL + A GL ++H+
Sbjct: 67 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 126
Query: 576 ---------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLP 619
+ +I+D GLA + + GT GYMAPE +
Sbjct: 127 FVVYRDLKPANILLDEHGHVRISDLGLACD----FSKKKPHASVGTHGYMAPEVLQKGVA 182
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ D +S G ++ ++++G
Sbjct: 183 YDSSADWFSLGCMLFKLLRG 202
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 111 bits (279), Expect = 9e-28
Identities = 48/282 (17%), Positives = 87/282 (30%), Gaps = 45/282 (15%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
++G G G +Y G +A G VA+K + E + +
Sbjct: 11 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLE-CVKTKHPQLHIESKIYKMMQGGVGIPTIR 69
Query: 525 FC-SEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
+C +EG + +++ E + D F S K +A + Y+H H +
Sbjct: 70 WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDV 129
Query: 579 EPK--------------IADFGLAKLSQRGSNSSQF-----SQIRGTKGYMAPEWASNLP 619
+P I DFGLAK + + GT Y + +
Sbjct: 130 KPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIE 189
Query: 620 ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679
+ + D+ S G V++ G ++K E +
Sbjct: 190 QSRRDDLESLGYVLMYFNLGSLPWQG-------------LKAATKRQKYERISEKKMSTP 236
Query: 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
++ KG ++ AT + C +P + Q
Sbjct: 237 IEVLCKG--YPSEFATYL---NFCRSLRFDDKPDYSYLRQLF 273
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (276), Expect = 2e-27
Identities = 62/282 (21%), Positives = 96/282 (34%), Gaps = 53/282 (18%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL-------GDLHQGEEVFWAEVSTIGKIYHM 517
EELG G V K + G A K + E EVS + +I H
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH-- 575
N++ + +LI E V L L L +E + G+ YLH
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ 133
Query: 576 ------------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN 617
+ KI DFGLA + ++F I GT ++APE +
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNY 190
Query: 618 LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677
P+ + D++S GV+ ++ G F+ + K++ L A
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASP-----------------FLGDTKQETLANVSAVNY 233
Query: 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
E D + A I + +D KR T+ +Q
Sbjct: 234 EFEDEYFSNT--SALAKDFIR---RLLVKDPKKRMTIQDSLQ 270
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (280), Expect = 2e-27
Identities = 62/303 (20%), Positives = 102/303 (33%), Gaps = 47/303 (15%)
Query: 449 SQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAE 507
+ + SY + K +G G G VY+ L D G VA+K++ Q + E
Sbjct: 15 DRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRE 63
Query: 508 VSTIGKIYHMNLVRMWGFCSEG------RHRLLIYEYVEKQSLDKHLFSSYF---LGWKE 558
+ + K+ H N+VR+ F + L+ +YV + S L
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 559 RFKVALGTAKGLAYLH-----------------HDEFEPKIADFGLAKLSQRGSNSSQFS 601
+ LAY+H D K+ DFG AK RG S
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVS 181
Query: 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFV 661
I T+ +DV+S G V+ E++ G + + G Q E+ + +
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEIIKVL 239
Query: 662 REVKRKILYEEEAWIEEIVDPRLKGK-----FNTNQAATLIGIGISCVDEDRSKRPTMDS 716
R+ + E E P++K F I + ++ + R T
Sbjct: 240 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 299
Query: 717 VVQ 719
Sbjct: 300 ACA 302
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 110 bits (276), Expect = 2e-27
Identities = 37/287 (12%), Positives = 78/287 (27%), Gaps = 47/287 (16%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMN-LVRMW 523
+G G G +++G L + + VA+K E T + + ++
Sbjct: 9 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFE-PRRSDAPQLRDEYRTYKLLAGCTGIPNVY 67
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
F EG H +L+ + + D K A + +H + +
Sbjct: 68 YFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDI 127
Query: 579 EP----------------KIADFGLAKLSQRGSNSS-----QFSQIRGTKGYMAPEWASN 617
+P + DFG+ K + + + GT YM+
Sbjct: 128 KPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG 187
Query: 618 LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677
+ + D+ + G V + ++G + +K ++ I
Sbjct: 188 REQSRRDDLEALGHVFMYFLRG------------------SLPWQGLKAATNKQKYERIG 229
Query: 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724
E + + P D + +
Sbjct: 230 EKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 276
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (270), Expect = 3e-26
Identities = 46/280 (16%), Positives = 96/280 (34%), Gaps = 52/280 (18%)
Query: 467 KEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-HMNLVRMWG 524
+ LG G +G V + A+K L D + EV + ++VR+
Sbjct: 17 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIVRIVD 72
Query: 525 FC----SEGRHRLLIYEYVEKQSLDKHLFS--SYFLGWKERFKVALGTAKGLAYLH---- 574
+ + L++ E ++ L + +E ++ + + YLH
Sbjct: 73 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 132
Query: 575 -HDEFEP--------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + +P K+ DFG AK ++ + + T Y+APE
Sbjct: 133 AHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEK 189
Query: 620 ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679
D++S GV++ ++ G + G +K +R + +
Sbjct: 190 YDKSCDMWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIRMGQYEF----------- 236
Query: 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
P + + + LI + + + ++R T+ +
Sbjct: 237 --PNPEWSEVSEEVKMLIR---NLLKTEPTQRMTITEFMN 271
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (265), Expect = 6e-26
Identities = 61/286 (21%), Positives = 102/286 (35%), Gaps = 45/286 (15%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E+S + ++ H N+V++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYF--LGWKERFKVALGTAKGLAYL------HH 575
L++E++ Q L K + +S + +GLA+ H
Sbjct: 68 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 576 D----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAKV 624
D E K+ADFGLA+ G ++ T Y APE + V
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 625 DVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRL 684
D++S G + EMV L G+ + +L R R + +E W P
Sbjct: 185 DIWSLGCIFAEMVTRRALF-----PGDSEIDQLFRIFRTLGT---PDEVVWPGVTSMPDY 236
Query: 685 KGKFNTNQAATLIGIGI-----------SCVDEDRSKRPTMDSVVQ 719
K F + + D +KR + + +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (264), Expect = 1e-25
Identities = 59/291 (20%), Positives = 103/291 (35%), Gaps = 50/291 (17%)
Query: 468 EELGRGGSGAVYKG--VLADGRAVAVKRL------GDLHQGEEVFWAEVSTIGKIYHMNL 519
E+G G G V+K + GR VA+KR+ + A + + H N+
Sbjct: 13 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 72
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYF------LGWKERFKVALGTAKGLAYL 573
VR++ C+ R + + +D+ L + + + + +GL +L
Sbjct: 73 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 132
Query: 574 HH----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN 617
H + K+ADFGLA++ S + + T Y APE
Sbjct: 133 HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPEVLLQ 189
Query: 618 LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677
VD++S G + EM + L G +L + + + L EE W
Sbjct: 190 SSYATPVDLWSVGCIFAEMFRRKPLF-----RGSSDVDQLGKILDVIG---LPGEEDWPR 241
Query: 678 EIVDPRLKGKFNTNQAATLIGIGIS---------CVDEDRSKRPTMDSVVQ 719
++ PR + Q I C+ + +KR + S +
Sbjct: 242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 104 bits (261), Expect = 3e-25
Identities = 50/195 (25%), Positives = 71/195 (36%), Gaps = 26/195 (13%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL----GDLHQGEEVFWAEVSTIGKIYHMNLV 520
LG G G V+ +GR A+K L + E E + + H ++
Sbjct: 8 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFII 67
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH----- 575
RMWG + + +I +Y+E L L S A L YLH
Sbjct: 68 RMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIY 127
Query: 576 -----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
KI DFG AK + GT Y+APE S P +
Sbjct: 128 RDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYTLCGTPDYIAPEVVSTKPYNKSI 182
Query: 625 DVYSYGVVILEMVKG 639
D +S+G++I EM+ G
Sbjct: 183 DWWSFGILIYEMLAG 197
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (257), Expect = 5e-25
Identities = 48/282 (17%), Positives = 101/282 (35%), Gaps = 37/282 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
E++G G G V+K VA+KR+ D E+ + ++ H N+VR+
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH-------- 575
+ L++E+ ++ + L + KGL + H
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL 127
Query: 576 --------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPI-TAKVDV 626
E K+A+FGLA+ G +S T Y P+ + + +D+
Sbjct: 128 KPQNLLINRNGELKLANFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185
Query: 627 YSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKG 686
+S G + E+ R + G + +LKR + + E+ + ++ D +
Sbjct: 186 WSAGCIFAELANAGRP----LFPGNDVDDQLKR-IFRLLGTPTEEQWPSMTKLPDYKPYP 240
Query: 687 KFNTNQAATLIGIGIS---------CVDEDRSKRPTMDSVVQ 719
+ + + ++ + + +R + + +Q
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (257), Expect = 2e-24
Identities = 63/309 (20%), Positives = 109/309 (35%), Gaps = 55/309 (17%)
Query: 454 FSYAELKKSTKSFK------EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV--- 503
F E+ K+ + + +G G GAV V G VA+K+L Q E
Sbjct: 4 FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 63
Query: 504 FWAEVSTIGKIYHMNLVRMWGFCSEGRHR------LLIYEYVEKQSLDKHLFSSYFLGWK 557
+ E+ + + H N++ + + L+ ++ + L LG
Sbjct: 64 AYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMG--TDLGKLMKHEKLGED 121
Query: 558 ERFKVALGTAKGLAYLHH----------------DEFEPKIADFGLAKLSQRGSNSSQFS 601
+ KGL Y+H ++ E KI DFGLA+ S+ +
Sbjct: 122 RIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMT 176
Query: 602 QIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKR- 659
T+ Y APE N + T VD++S G ++ EM+ G L + D Q E+ +
Sbjct: 177 GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTL--FKGSDHLDQLKEIMKV 234
Query: 660 -------FVREVKRKILYEEEAWIEEIVDPRLKGKFN--TNQAATLIGIGISCVDEDRSK 710
FV+ ++ + E+ + A L+ + D +
Sbjct: 235 TGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLE---KMLVLDAEQ 291
Query: 711 RPTMDSVVQ 719
R T +
Sbjct: 292 RVTAGEALA 300
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (255), Expect = 2e-24
Identities = 45/284 (15%), Positives = 95/284 (33%), Gaps = 35/284 (12%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVRMWG 524
+G G G V + VA+K++ E+ + + H N++ +
Sbjct: 14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 73
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFS---SYFLGWKERFKVALGTAKGLAYLH------- 574
+ Y+ + L+ + L +GL Y+H
Sbjct: 74 IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 133
Query: 575 ---------HDEFEPKIADFGLAKLSQRGSNS-SQFSQIRGTKGYMAPEWASN-LPITAK 623
+ + KI DFGLA+++ + ++ T+ Y APE N T
Sbjct: 134 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 193
Query: 624 VDVYSYGVVILEMVKGIRL--SNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681
+D++S G ++ EM+ + ++ L +E I+ + +
Sbjct: 194 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 253
Query: 682 PRLKGKFN------TNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
+ K +N ++A L+ + + KR ++ +
Sbjct: 254 HKNKVPWNRLFPNADSKALDLLD---KMLTFNPHKRIEVEQALA 294
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (253), Expect = 4e-24
Identities = 53/292 (18%), Positives = 94/292 (32%), Gaps = 43/292 (14%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
++G+G G V+K G+ VA+K++ + E+ + + H N+V +
Sbjct: 16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 75
Query: 524 GFCSEGRHR--------LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL-- 573
C L++++ E E +V GL Y+
Sbjct: 76 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 135
Query: 574 ----HHD----------EFEPKIADFGLAKLSQRGSNS--SQFSQIRGTKGYMAPEWASN 617
H D + K+ADFGLA+ NS ++++ T Y PE
Sbjct: 136 NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLG 195
Query: 618 -LPITAKVDVYSYGVVILEMVKG---------IRLSNWVVEDGEGQEAELKRFVREVKRK 667
+D++ G ++ EM + + E+ V +
Sbjct: 196 ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY 255
Query: 668 ILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
E + V RLK A LI + D ++R D +
Sbjct: 256 EKLELVKGQKRKVKDRLKAYVRDPYALDLID---KLLVLDPAQRIDSDDALN 304
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.6 bits (237), Expect = 6e-22
Identities = 45/195 (23%), Positives = 61/195 (31%), Gaps = 23/195 (11%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRL----GDLHQGEEVFWAEVSTIGKIYHMNLV 520
+ + LG+G G V A GR A+K L E + H L
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH----- 575
+ + EY L HL + L YLH
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128
Query: 576 -----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ KI DFGL K S+ + GT Y+APE + V
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKTFCGTPEYLAPEVLEDNDYGRAV 186
Query: 625 DVYSYGVVILEMVKG 639
D + GVV+ EM+ G
Sbjct: 187 DWWGLGVVMYEMMCG 201
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.8 bits (219), Expect = 1e-19
Identities = 53/297 (17%), Positives = 101/297 (34%), Gaps = 54/297 (18%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
+ +G G G V R VA+K+L Q + + E+ + + H N++ +
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 524 GFCS------EGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH-- 575
+ E + L+ E ++ L + + G+ +LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG 139
Query: 576 --------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
+ KI DFGLA+ + S + T+ Y APE +
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYK 196
Query: 622 AKVDVYSYGVVILEMVKGI-----------------RLSNWVVEDGEGQEAELKRFVREV 664
VD++S G ++ EMV+ +L E + + ++ +V
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 256
Query: 665 KRKILYEEEAWIEEIVDPRLK--GKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719
+ + + P K +QA L+ + D +KR ++D +Q
Sbjct: 257 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLS---KMLVIDPAKRISVDDALQ 310
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 86.8 bits (214), Expect = 5e-19
Identities = 39/193 (20%), Positives = 65/193 (33%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRL--GDLHQGEEV--FWAEVSTIGKIYHMNLVRM 522
+ LG G G V G A+K L + + +++ E + + LV++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-------- 574
+ + ++ EYV + HL A YLH
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 575 --------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
+ ++ DFG AK + + GT +APE + VD
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEALAPEIILSKGYNKAVDW 221
Query: 627 YSYGVVILEMVKG 639
++ GV+I EM G
Sbjct: 222 WALGVLIYEMAAG 234
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 86.0 bits (212), Expect = 7e-19
Identities = 43/292 (14%), Positives = 93/292 (31%), Gaps = 50/292 (17%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMW 523
+LGRG V++ + + + V VK L + ++ E+ + + N++ +
Sbjct: 39 LVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLRGGPNIITLA 96
Query: 524 GFCSEGRHRL--LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH------- 574
+ R L++E+V + + L + K L Y H
Sbjct: 97 DIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHR 153
Query: 575 ----------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAK 623
H+ + ++ D+GLA+ +++ ++ + PE
Sbjct: 154 DVKPHNVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKGPELLVDYQMYDYS 210
Query: 624 VDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683
+D++S G ++ M+ G +L R + + + LY+ +DPR
Sbjct: 211 LDMWSLGCMLASMIFRKE----PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 266
Query: 684 LKGKFNTNQAATLIGIGIS----------------CVDEDRSKRPTMDSVVQ 719
+ S + D R T ++
Sbjct: 267 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.7 bits (211), Expect = 9e-19
Identities = 55/277 (19%), Positives = 87/277 (31%), Gaps = 51/277 (18%)
Query: 466 FKEELGRGGSGAVYKGVLA----DGRAVAVKRL-----GDLHQGEEVFWAEVSTIGKIYH 516
+ LG G G V+ G+ A+K L + E E + I
Sbjct: 28 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ 87
Query: 517 M-NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH 575
LV + LI +Y+ L HL E L +LH
Sbjct: 88 SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHK 147
Query: 576 ----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW--ASN 617
+ DFGL+K + + GT YMAP+ +
Sbjct: 148 LGIIYRDIKLENILLDSNGHVVLTDFGLSK-EFVADETERAYDFCGTIEYMAPDIVRGGD 206
Query: 618 LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677
VD +S GV++ E++ G +G++ E+ R+IL E + +
Sbjct: 207 SGHDKAVDWWSLGVLMYELLTGASP-----FTVDGEKNSQA----EISRRILKSEPPYPQ 257
Query: 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM 714
E+ + A LI + +D KR
Sbjct: 258 EM----------SALAKDLI---QRLLMKDPKKRLGC 281
|
| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Score = 75.7 bits (186), Expect = 4e-17
Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
Query: 18 SIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGADRA 77
SI ++ + T + + + R S+ + +VL D DD V RA
Sbjct: 11 SILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDRDDRVWSTNTAGKGTGCRA 70
Query: 78 ELLDTGNLVLKDRHGKILWQSFD--YPTDTLLPNQ 110
L G + + +W S + + Q
Sbjct: 71 VLQPNGRMDVLTNQNIAVWTSGNSRSAGRYVFVLQ 105
|
| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Score = 45.7 bits (108), Expect = 1e-06
Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 32/141 (22%)
Query: 83 GNLVLKDRHGKILW--QSFDYPTDTLLPNQVFRKSTKLISGVGNGTYASGYFSLYFDNDN 140
G++V+ + IL+ Q D TL Q + + L + D
Sbjct: 1 GSVVVANNGNSILYSTQGNDNHPQTLHATQ---------------SLQLSPYRLSMETDC 45
Query: 141 VLRLIYDGPEISSVYWPDPDFDVFQNGRTKYNSSRIAVLDDFGS---FSSSDELKFSAID 197
L L D D V+ + AVL G ++ + +++ +
Sbjct: 46 NLVLF------------DRDDRVWSTNTAGKGTGCRAVLQPNGRMDVLTNQNIAVWTSGN 93
Query: 198 MGFGIKRRLTMDYDGNLRLYS 218
+ + D NL +Y
Sbjct: 94 SRSAGRYVFVLQPDRNLAIYG 114
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 80.5 bits (197), Expect = 9e-17
Identities = 29/209 (13%), Positives = 63/209 (30%), Gaps = 35/209 (16%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+LG G V+ + + VA+K + E E+ + ++ + +
Sbjct: 17 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDS 76
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW----------------KERFKVALGTAK 568
+ +LL + + + + LG +++
Sbjct: 77 MGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL 136
Query: 569 GLAYLHH------------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYM 610
GL Y+H + + +A L ++ T+ Y
Sbjct: 137 GLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYR 196
Query: 611 APEWASNLPITAKVDVYSYGVVILEMVKG 639
+PE P D++S +I E++ G
Sbjct: 197 SPEVLLGAPWGCGADIWSTACLIFELITG 225
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.9 bits (196), Expect = 1e-16
Identities = 63/305 (20%), Positives = 107/305 (35%), Gaps = 47/305 (15%)
Query: 454 FSYAELKKSTKSFKE------ELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGE---EV 503
F EL K+ E +G G G+V G VAVK+L Q +
Sbjct: 4 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 63
Query: 504 FWAEVSTIGKIYHMNLVRMWGFCSEGR-----HRLLIYEYVEKQSLDKHLFSSYFLGWKE 558
+ E+ + + H N++ + + R + + + ++ L+ ++ L
Sbjct: 64 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH 122
Query: 559 RFKVALGTAKGLAYLH----------------HDEFEPKIADFGLAKLSQRGSNSSQFSQ 602
+ +GL Y+H +++ E KI DFGLA+ +
Sbjct: 123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-- 180
Query: 603 IRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFV 661
T+ Y APE N + VD++S G ++ E++ G L + D Q + R V
Sbjct: 181 ---TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLILRLV 235
Query: 662 REVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVD-------EDRSKRPTM 714
++L + + L N A IG VD D KR T
Sbjct: 236 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 715 DSVVQ 719
+
Sbjct: 296 AQALA 300
|
| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Score = 70.4 bits (172), Expect = 3e-15
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Query: 18 SIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGADRA 77
+I F S + + T + + + R +++ + +VL D D +W +NT RA
Sbjct: 2 NILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFD-SDVRVWASNTAGATGCRA 60
Query: 78 ELLDTGNLVLKDRHGKILWQSF 99
L G LV+ I W S
Sbjct: 61 VLQSDGLLVILTAQNTIRWSSG 82
|
| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Garlic (Allium sativum) [TaxId: 4682]
Score = 69.2 bits (169), Expect = 6e-15
Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 8/101 (7%)
Query: 2 TFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDD 61
+ Y + + HS T VW +N +A L+ +G V+ D +
Sbjct: 15 SLDVEPYHFIMQEDCNLVLYDHS---TSVWASNTGILGKKG-CKAVLQSDGNFVVYDAEG 70
Query: 62 TVIWMTNTT-STGADRAELLDTGNLVLKDRHGKILWQSFDY 101
+W +++ G L + GN+V+ +W + Y
Sbjct: 71 RSLWASHSVRGNGNYVLVLQEDGNVVIYGS---DIWSTGTY 108
|
| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Garlic (Allium sativum) [TaxId: 4682]
Score = 36.5 bits (84), Expect = 0.002
Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 17/115 (14%)
Query: 104 DTLLPNQVFRKSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDV 163
+ L + L +G + + D L ++YD V+ +
Sbjct: 2 NLLTNGEG------LYAG---QSLDVEPYHFIMQEDCNL-VLYDHSTS--VWASNTGILG 49
Query: 164 FQNGRTKYNSSRIAVLDDFGSFSSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYS 218
+ + S V+ D + +++ + L + DGN+ +Y
Sbjct: 50 KKGCKAVLQSDGNFVVYD-----AEGRSLWASHSVRGNGNYVLVLQEDGNVVIYG 99
|
| >d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Gastrodianin (antifungal protein) species: Gastrodia elata [TaxId: 91201]
Score = 61.0 bits (147), Expect = 5e-12
Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Query: 28 TVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGADRAELLDTGNLVL 87
VW + + G ++ +G +V+ + G L N+V+
Sbjct: 38 RAVWASGTNGK--ASGCVLKMQNDGNLVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVI 95
Query: 88 KDRHGKILWQSFDYPTD 104
D +W + +
Sbjct: 96 YDNSNNAIWATHTNVGN 112
|
| >d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Gastrodianin (antifungal protein) species: Gastrodia elata [TaxId: 91201]
Score = 45.6 bits (107), Expect = 1e-06
Identities = 20/137 (14%), Positives = 35/137 (25%), Gaps = 28/137 (20%)
Query: 103 TDTLLPNQVFRKSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFD 162
+D L G+ A G + ND L L + W
Sbjct: 1 SDRLNSGHQLDT---------GGSLAEGGYLFIIQNDCNLVLYDNNR----AVW------ 41
Query: 163 VFQNGRTKYNSSRIAVLDDFGSFSSSDELKF--SAIDMGFGIKRRLTMDYDGNLRLYSLN 220
+G S + + + G+ + ++ L + D N+ +Y
Sbjct: 42 --ASGTNGKASGCVLKMQNDGNLVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVIYD-- 97
Query: 221 KVTGSWMISWQALMQPG 237
S W G
Sbjct: 98 ---NSNNAIWATHTNVG 111
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 60.6 bits (146), Expect = 4e-11
Identities = 20/151 (13%), Positives = 36/151 (23%), Gaps = 29/151 (19%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRL-----------GDLHQGEEVFWAEVSTIGK 513
+ + +G G AV+ VK G+ F +
Sbjct: 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSAR 62
Query: 514 IYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
L ++ G + + + K L+ E V + +A
Sbjct: 63 NEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDE---VLDMILEEVAKF 119
Query: 574 HH---------------DEFEPKIADFGLAK 589
+H E I DF +
Sbjct: 120 YHRGIVHGDLSQYNVLVSEEGIWIIDFPQSV 150
|
| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Bluebell (Scilla campanulata) [TaxId: 81759]
Score = 56.6 bits (136), Expect = 2e-10
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 6/75 (8%)
Query: 28 TVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGAD-RAELLDTGNLV 86
+W N G G RA L+ +G +V+ ++ +W + L N+V
Sbjct: 49 NPIWATNTGG--LGNGCRAVLQPDGVLVVITNENVTVWQSPVAGKAGHYVLVLQPDRNVV 106
Query: 87 LKDRHGKILWQSFDY 101
+ +G LW +
Sbjct: 107 I---YGDALWATQTV 118
|
| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Bluebell (Scilla campanulata) [TaxId: 81759]
Score = 46.5 bits (110), Expect = 7e-07
Identities = 17/126 (13%), Positives = 31/126 (24%), Gaps = 26/126 (20%)
Query: 96 WQSFDYPTDTLLPNQVFRKSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVY 155
Q D L + + + + D L ++YD ++
Sbjct: 7 KQPDDNHPQILHATESLEIL-----------FGTHVYRFIMQTDCNL-VLYDN---NNPI 51
Query: 156 WPDPDFDVFQNGRTKYNSSRIAVLDDFGSFSSSDELK---FSAIDMGFGIKRRLTMDYDG 212
W + AVL G + + G L + D
Sbjct: 52 W--------ATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQSPVAGKAGHYVLVLQPDR 103
Query: 213 NLRLYS 218
N+ +Y
Sbjct: 104 NVVIYG 109
|
| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Bluebell (Scilla campanulata) [TaxId: 81759]
Score = 43.5 bits (102), Expect = 7e-06
Identities = 17/86 (19%), Positives = 32/86 (37%)
Query: 13 NAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTST 72
N +FS + + + T + + R ++ + +VL D ++ +
Sbjct: 1 NNIIFSKQPDDNHPQILHATESLEILFGTHVYRFIMQTDCNLVLYDNNNPIWATNTGGLG 60
Query: 73 GADRAELLDTGNLVLKDRHGKILWQS 98
RA L G LV+ +WQS
Sbjct: 61 NGCRAVLQPDGVLVVITNENVTVWQS 86
|
| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Snowdrop (Galanthus nivalis) [TaxId: 4670]
Score = 53.9 bits (129), Expect = 1e-09
Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 17/106 (16%)
Query: 1 KTFSCGFYGLG----GNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVL 56
+ + G + N L+ +W N + S++ +G +V+
Sbjct: 14 EFLNYGSFVFIMQEDCNLVLY-------DVDKPIWATNTGGL--SRSCFLSMQTDGNLVV 64
Query: 57 TDVDDTVIWMTNTTSTGAD-RAELLDTGNLVLKDRHGKILWQSFDY 101
+ + IW +NT + L N+V+ W + +
Sbjct: 65 YNPSNKPIWASNTGGQNGNYVCILQKDRNVVIYGTD---RWATGTH 107
|
| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Snowdrop (Galanthus nivalis) [TaxId: 4670]
Score = 36.9 bits (85), Expect = 0.001
Identities = 14/115 (12%), Positives = 32/115 (27%), Gaps = 18/115 (15%)
Query: 104 DTLLPNQVFRKSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDV 163
+ L + G F D L ++YD W +
Sbjct: 2 NILYSGETLS---------TGEFLNYGSFVFIMQEDCNL-VLYDV---DKPIWATNTGGL 48
Query: 164 FQNGRTKYNSSRIAVLDDFGSFSSSDELKFSAIDMGFGIKRRLTMDYDGNLRLYS 218
++ + V+ + S++ +++ G + D N+ +Y
Sbjct: 49 SRSCFLSMQTDGNLVVYN-----PSNKPIWASNTGGQNGNYVCILQKDRNVVIYG 98
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 736 | |||
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.97 | |
| d1dlpa2 | 120 | Fetuin-binding protein Scafet precursor {Bluebell | 99.7 | |
| d1xd5a_ | 112 | Gastrodianin (antifungal protein) {Gastrodia elata | 99.65 | |
| d1kj1a_ | 109 | Lectin (agglutinin) {Garlic (Allium sativum) [TaxI | 99.63 | |
| d1jpca_ | 108 | Lectin (agglutinin) {Snowdrop (Galanthus nivalis) | 99.6 | |
| d1dlpa1 | 115 | Fetuin-binding protein Scafet precursor {Bluebell | 99.6 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.55 | |
| d1b2pa_ | 119 | Lectin (agglutinin) {Bluebell (Scilla campanulata) | 99.24 | |
| d1dlpa1 | 115 | Fetuin-binding protein Scafet precursor {Bluebell | 98.88 | |
| d1jpca_ | 108 | Lectin (agglutinin) {Snowdrop (Galanthus nivalis) | 98.86 | |
| d1kj1a_ | 109 | Lectin (agglutinin) {Garlic (Allium sativum) [TaxI | 98.85 | |
| d1b2pa_ | 119 | Lectin (agglutinin) {Bluebell (Scilla campanulata) | 98.84 | |
| d1dlpa2 | 120 | Fetuin-binding protein Scafet precursor {Bluebell | 98.67 | |
| d1xd5a_ | 112 | Gastrodianin (antifungal protein) {Gastrodia elata | 98.51 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 94.85 | |
| d1emoa2 | 39 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 94.74 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 90.94 | |
| d2vj3a1 | 42 | Neurogenic locus notch homolog protein 1, Notch1 { | 85.6 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 81.56 | |
| d1emoa1 | 43 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 81.5 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-46 Score=384.08 Aligned_cols=241 Identities=23% Similarity=0.323 Sum_probs=186.6
Q ss_pred hhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
+.|++.++||+|+||+||+|++.+++.||||+++......++|.+|++++++++|||||+++|+|.+++..+||||||++
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~ 84 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 84 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCC
Confidence 45788899999999999999988888999999988777788899999999999999999999999999999999999999
Q ss_pred CCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeeccc
Q 041821 542 QSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQIR 604 (736)
Q Consensus 542 gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~~ 604 (736)
|+|.+++... ..+++..+..++.|||+||.|||+++ ..+||+|||+++......... .....
T Consensus 85 g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~-~~~~~ 163 (263)
T d1sm2a_ 85 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTK 163 (263)
T ss_dssp CBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC------------------
T ss_pred CcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCcee-eccee
Confidence 9999998765 47899999999999999999999763 378999999998775543322 34467
Q ss_pred ccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCcc
Q 041821 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRL 684 (736)
Q Consensus 605 gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 684 (736)
||+.|||||++.+..|+.++|||||||++|||+++..|+..... ...+...+ ..+.
T Consensus 164 gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~--------~~~~~~~i----~~~~------------ 219 (263)
T d1sm2a_ 164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--------NSEVVEDI----STGF------------ 219 (263)
T ss_dssp -CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC--------HHHHHHHH----HHTC------------
T ss_pred cCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC--------HHHHHHHH----HhcC------------
Confidence 99999999999999999999999999999999996555432211 11111111 1111
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 685 KGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 685 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
+...+...+..+.+|+.+||+.||++||||+||+++|+++.+.
T Consensus 220 ~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~es 262 (263)
T d1sm2a_ 220 RLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262 (263)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence 1112223346788999999999999999999999999988653
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6.7e-46 Score=383.66 Aligned_cols=248 Identities=23% Similarity=0.315 Sum_probs=203.5
Q ss_pred HHHHHhhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 457 AELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 457 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
.||....|++.++||+|+||+||+|+.. +++.||||+++......++|.+|+++|++++|||||+++++|.+++..+||
T Consensus 12 wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (287)
T d1opja_ 12 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 91 (287)
T ss_dssp TBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred cEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEE
Confidence 3567788999999999999999999964 588999999987777778899999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCc
Q 041821 536 YEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~ 597 (736)
||||++|+|.+++... ..+++..++.|+.||++||+|||++++ .+||+|||+|+........
T Consensus 92 ~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~ 171 (287)
T d1opja_ 92 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 171 (287)
T ss_dssp EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSE
T ss_pred eecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCce
Confidence 9999999999998654 478999999999999999999997643 7899999999977554332
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
......||+.|||||++.+..|+.++|||||||++|||++|..|+..... ...+..
T Consensus 172 -~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~--------~~~~~~--------------- 227 (287)
T d1opja_ 172 -AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--------LSQVYE--------------- 227 (287)
T ss_dssp -EETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC--------HHHHHH---------------
T ss_pred -eeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch--------HHHHHH---------------
Confidence 24445689999999999999999999999999999999998777653211 111111
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccc
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (736)
.+........+...+..+.+|+.+||+.||++||||+||++.|+.+.++..
T Consensus 228 -~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~~~ 278 (287)
T d1opja_ 228 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 278 (287)
T ss_dssp -HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSSSC
T ss_pred -HHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhCC
Confidence 111111222333445688999999999999999999999999998866543
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-45 Score=371.27 Aligned_cols=237 Identities=21% Similarity=0.317 Sum_probs=196.9
Q ss_pred hhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
..+++.++||+|+||+||+|+.++++.||||+++......++|.+|+.++++++|||||+++|+|.+++..++||||+++
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~ 83 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 83 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTT
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCC
Confidence 45788999999999999999998888999999988777778899999999999999999999999999999999999999
Q ss_pred CCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceeeccc
Q 041821 542 QSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFSQIR 604 (736)
Q Consensus 542 gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~~~~ 604 (736)
|+|.+++... ..+++..+.+++.||++||.|||+. +..+||+|||+++.+...... ......
T Consensus 84 g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~ 162 (258)
T d1k2pa_ 84 GCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSK 162 (258)
T ss_dssp EEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC-CCCCSC
T ss_pred CcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCce-eecccC
Confidence 9999997654 4799999999999999999999976 347899999999877654332 244567
Q ss_pred ccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 605 gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
||+.|||||.+.+..++.++|||||||++|||++ |+.||..... . .. ...+..+
T Consensus 163 ~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~------~---~~----~~~i~~~------------ 217 (258)
T d1k2pa_ 163 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN------S---ET----AEHIAQG------------ 217 (258)
T ss_dssp CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCH------H---HH----HHHHHTT------------
T ss_pred CCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCH------H---HH----HHHHHhC------------
Confidence 9999999999999999999999999999999998 7888864321 1 11 1111111
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.+...+...++.+.+|+.+||+.||++|||+++|+++|.++
T Consensus 218 ~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 218 LRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred CCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence 11122233446789999999999999999999999999764
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-45 Score=378.93 Aligned_cols=242 Identities=26% Similarity=0.341 Sum_probs=195.6
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
||....|++.++||+|+||+||+|++++++.||||+++......+.|.+|+.+|++++|||||+++|++.+ +..+||||
T Consensus 9 ei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~E 87 (272)
T d1qpca_ 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE 87 (272)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred ecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEE
Confidence 34567888999999999999999999888899999998777777889999999999999999999998865 56799999
Q ss_pred cCCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcce
Q 041821 538 YVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~ 599 (736)
||++|+|.+++.... .+++.+++.|+.||++||.|||++ +..+||+|||+|+.+...... .
T Consensus 88 y~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~-~ 166 (272)
T d1qpca_ 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-A 166 (272)
T ss_dssp CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE-C
T ss_pred eCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCccc-c
Confidence 999999999876543 699999999999999999999965 447899999999987654322 2
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.....||+.|||||++.+..++.++|||||||++|||+||..|+..... ...... .+..+
T Consensus 167 ~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~--------~~~~~~----~i~~~-------- 226 (272)
T d1qpca_ 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--------NPEVIQ----NLERG-------- 226 (272)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC--------HHHHHH----HHHTT--------
T ss_pred ccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCC--------HHHHHH----HHHhc--------
Confidence 3456789999999999988999999999999999999997666542211 011111 11111
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
.+...+...+..+.+|+.+||+.||++||||++|+++|+..-
T Consensus 227 ----~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f 268 (272)
T d1qpca_ 227 ----YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (272)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence 111122334467899999999999999999999999998754
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-45 Score=374.75 Aligned_cols=245 Identities=28% Similarity=0.444 Sum_probs=186.9
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcc---cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDL---HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
|..+.|.+.+.||+|+||+||+|+.+ ..||||+++.. ....+.|.+|+.+|++++|||||++++++.+ +..+||
T Consensus 5 i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv 81 (276)
T d1uwha_ 5 IPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIV 81 (276)
T ss_dssp CCTTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred cccccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEE
Confidence 45667889999999999999999864 36999999643 3445789999999999999999999998755 568999
Q ss_pred EecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcc
Q 041821 536 YEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~ 598 (736)
||||++|+|.+++... ..+++..++.|+.||++||+|||++ +..+||+|||+|+.........
T Consensus 82 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~ 161 (276)
T d1uwha_ 82 TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161 (276)
T ss_dssp EECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC--------
T ss_pred EecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcc
Confidence 9999999999999754 4799999999999999999999976 3478999999998776544444
Q ss_pred eeecccccCcccChhcccC---CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 599 QFSQIRGTKGYMAPEWASN---LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
......||+.|||||++.+ .+|+.++|||||||++|||++|+.||..... . ..+...+.+ +
T Consensus 162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~-----~---~~~~~~~~~----~---- 225 (276)
T d1uwha_ 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-----R---DQIIFMVGR----G---- 225 (276)
T ss_dssp ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----H---HHHHHHHHH----T----
T ss_pred cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCCh-----H---HHHHHHHhc----C----
Confidence 4566789999999999864 3589999999999999999999999974321 0 111111111 0
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
...+.+ ...+...+..+.+|+.+||+.||++||||+||+++|+.+.+
T Consensus 226 ---~~~p~~-~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~ 272 (276)
T d1uwha_ 226 ---YLSPDL-SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 272 (276)
T ss_dssp ---SCCCCG-GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCcc-hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 111111 11222345678899999999999999999999999998754
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-44 Score=370.34 Aligned_cols=236 Identities=22% Similarity=0.246 Sum_probs=188.8
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
++|++.+.||+|+||+||+|+. .+++.||||+++... ...+.+.+|+.+|++++|||||++++++.+++..+|||||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy 84 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence 4688899999999999999995 468999999986532 3345689999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
|++|+|.+++.....+++.++..++.||++||+|||++ +..+||+|||+|+.+...........
T Consensus 85 ~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~ 164 (271)
T d1nvra_ 85 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 164 (271)
T ss_dssp CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCC
T ss_pred cCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccc
Confidence 99999999998888899999999999999999999975 34789999999998765443333456
Q ss_pred ccccCcccChhcccCCCC-ccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 603 IRGTKGYMAPEWASNLPI-TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
.+||+.|||||++.+..+ +.++|||||||++|||++|+.||........ ...... .
T Consensus 165 ~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~--------~~~~~~----~----------- 221 (271)
T d1nvra_ 165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--------EYSDWK----E----------- 221 (271)
T ss_dssp CCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSH--------HHHHHH----T-----------
T ss_pred eeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHH--------HHHHHh----c-----------
Confidence 789999999999988876 6789999999999999999999974332111 000000 0
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...........+..+.+|+.+||+.||++|||++||++|
T Consensus 222 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 260 (271)
T d1nvra_ 222 KKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 260 (271)
T ss_dssp TCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000001112234577889999999999999999999875
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-44 Score=363.78 Aligned_cols=229 Identities=23% Similarity=0.266 Sum_probs=190.2
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
++|++.+.||+|+||+||+|+.. +++.||||++.+. ....+.+.+|+++|++++|||||++++++.+++..+|||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence 46889999999999999999964 5889999998642 234567899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|||++|+|.+++.....+++.++..++.||++||+|||+++ ..+||+|||+|+...... .
T Consensus 86 Ey~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~----~ 161 (263)
T d2j4za1 86 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 161 (263)
T ss_dssp ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCC----C
T ss_pred eecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCCc----c
Confidence 99999999999988778999999999999999999999763 378999999998665432 3
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
....||+.|||||++.+..++.++|||||||++|||++|+.||..... .... ..+....
T Consensus 162 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~---------~~~~----~~i~~~~-------- 220 (263)
T d2j4za1 162 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY---------QETY----KRISRVE-------- 220 (263)
T ss_dssp EETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH---------HHHH----HHHHTTC--------
T ss_pred cccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH---------HHHH----HHHHcCC--------
Confidence 456799999999999999999999999999999999999999964321 1111 1111111
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+...++.+.+|+.+||+.||++|||++||++|
T Consensus 221 -----~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~h 255 (263)
T d2j4za1 221 -----FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 255 (263)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -----CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcC
Confidence 11222334678899999999999999999999874
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.4e-44 Score=373.06 Aligned_cols=243 Identities=24% Similarity=0.337 Sum_probs=183.3
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCC-C---cEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLAD-G---RAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
+..+.|++.++||+|+||+||+|+... + ..||||++... ....+.|.+|+++|++++|||||+++|++.+++..
T Consensus 23 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~ 102 (299)
T d1jpaa_ 23 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV 102 (299)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 344567788899999999999999643 3 36899998653 33456799999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~ 595 (736)
++|||||++|+|.+++... ..+++.+++.++.||++||.|||++ ++.+||+|||+|+.+....
T Consensus 103 ~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~ 182 (299)
T d1jpaa_ 103 MIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 182 (299)
T ss_dssp EEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCC
Confidence 9999999999999988774 4799999999999999999999975 4478999999999776543
Q ss_pred Ccce---eecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 596 NSSQ---FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 596 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
.... .....||+.|||||++.+..++.++|||||||++|||++ |+.||..... ..+.. .+..
T Consensus 183 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~---------~~~~~----~i~~- 248 (299)
T d1jpaa_ 183 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN---------QDVIN----AIEQ- 248 (299)
T ss_dssp -------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---------HHHHH----HHHT-
T ss_pred CcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCH---------HHHHH----HHHc-
Confidence 3221 223467999999999999999999999999999999998 8999864321 11111 1111
Q ss_pred ccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 672 EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 672 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
..+...+...+..+.+|+.+||+.||++||||.||+++|+.+.+
T Consensus 249 -----------~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~ 292 (299)
T d1jpaa_ 249 -----------DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292 (299)
T ss_dssp -----------TCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -----------CCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 11122233455678999999999999999999999999998764
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-44 Score=368.84 Aligned_cols=242 Identities=24% Similarity=0.342 Sum_probs=190.5
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
|..+++++.+.||+|+||+||+|+.++++.||||+++......+.|.+|+.+|++++|||||+++|++.+ +..++||||
T Consensus 14 i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey 92 (285)
T d1fmka3 14 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 92 (285)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred cCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEe
Confidence 3456899999999999999999999888899999998777777889999999999999999999999854 567899999
Q ss_pred CCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCccee
Q 041821 539 VEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 539 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|++|+|..++... ..+++.+++.|+.||++||+|||+.+ +.+||+|||+|+........ ..
T Consensus 93 ~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~ 171 (285)
T d1fmka3 93 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-AR 171 (285)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred cCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCce-ee
Confidence 9999999988653 36999999999999999999999763 37899999999876544332 24
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
....||+.|+|||++.+..++.++|||||||++|||++|..|+...... ......+. .
T Consensus 172 ~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~--------~~~~~~i~----~---------- 229 (285)
T d1fmka3 172 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQVE----R---------- 229 (285)
T ss_dssp ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHH----T----------
T ss_pred ccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH--------HHHHHHHH----h----------
Confidence 4567999999999999999999999999999999999987776532211 11111111 1
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
......+...++.+.+++.+||+.||++||||++|+++|+....
T Consensus 230 --~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~ 273 (285)
T d1fmka3 230 --GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 273 (285)
T ss_dssp --TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred --cCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhc
Confidence 11122333445678999999999999999999999999998654
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.7e-44 Score=366.50 Aligned_cols=240 Identities=23% Similarity=0.287 Sum_probs=189.8
Q ss_pred Hhhhhccc-ccCeeceeEEEEeeeC---CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 461 KSTKSFKE-ELGRGGSGAVYKGVLA---DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 461 ~~~~~~~~-~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
++.+.+.+ +||+|+||+||+|..+ ++..||||+++... ...++|.+|+++|++++|||||+++|++.+ +..+|
T Consensus 7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~l 85 (285)
T d1u59a_ 7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 85 (285)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEE
Confidence 34556667 4999999999999753 35579999997533 345779999999999999999999999875 56799
Q ss_pred EEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCc
Q 041821 535 IYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~ 597 (736)
|||||++|+|.+++... ..+++.++..++.||++||+|||++ +..+||+|||+|+.+......
T Consensus 86 vmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~ 165 (285)
T d1u59a_ 86 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 165 (285)
T ss_dssp EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred EEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccccccc
Confidence 99999999999997654 4799999999999999999999976 347899999999987654332
Q ss_pred c-eeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 598 S-QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 598 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
. ......||+.|||||++.+..++.++|||||||++|||++ |+.||..... .. +. ..+..+.
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~------~~---~~----~~i~~~~--- 229 (285)
T d1u59a_ 166 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG------PE---VM----AFIEQGK--- 229 (285)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT------HH---HH----HHHHTTC---
T ss_pred cccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCH------HH---HH----HHHHcCC---
Confidence 2 2234568999999999999999999999999999999998 8999874321 11 11 1111111
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
+...+...+..+.+|+.+||+.||++||||.+|++.|+....
T Consensus 230 ---------~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~ 271 (285)
T d1u59a_ 230 ---------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 271 (285)
T ss_dssp ---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------CCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 112333445678999999999999999999999999986543
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-44 Score=376.35 Aligned_cols=242 Identities=27% Similarity=0.336 Sum_probs=193.5
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCC-C-----cEEEEEEeCcc--cccHHHHHHHHHHHhcC-CCCceeeEEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-G-----RAVAVKRLGDL--HQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE 528 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~-----~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 528 (736)
||..+.+++.++||+|+||+||+|+... + ..||||.+... ......+.+|+.+|.++ +|||||++++++.+
T Consensus 33 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~ 112 (325)
T d1rjba_ 33 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 112 (325)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEee
Confidence 4566789999999999999999998532 2 36999998653 23346789999999998 89999999999999
Q ss_pred CCeEEEEEecCCCCCHhhhcccCC-----------------------CCCHHHHHHHHHHHHHHhhhhhcC---------
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSSY-----------------------FLGWKERFKVALGTAKGLAYLHHD--------- 576 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~~-----------------------~l~~~~~~~i~~~i~~gL~yLH~~--------- 576 (736)
.+..+||||||++|+|.++|+... .+++..++.|+.||++||+|||++
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp 192 (325)
T d1rjba_ 113 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAA 192 (325)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSG
T ss_pred CCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCch
Confidence 999999999999999999997542 489999999999999999999975
Q ss_pred -------CCccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCcccc
Q 041821 577 -------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVE 648 (736)
Q Consensus 577 -------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~ 648 (736)
+..+||+|||+|+...............||+.|||||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 193 ~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~ 272 (325)
T d1rjba_ 193 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 272 (325)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH
Confidence 34789999999987766554444556778999999999999999999999999999999998 8999864322
Q ss_pred CCccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 041821 649 DGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLE 723 (736)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (736)
. ..+.. ++....+...+...+..+.+|+.+||+.||++||||+||+++|..
T Consensus 273 ~-----~~~~~-------------------~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 323 (325)
T d1rjba_ 273 D-----ANFYK-------------------LIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC 323 (325)
T ss_dssp S-----HHHHH-------------------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred H-----HHHHH-------------------HHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence 1 11111 111111222333445689999999999999999999999999963
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-43 Score=366.76 Aligned_cols=244 Identities=24% Similarity=0.370 Sum_probs=185.7
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCCC-----cEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLADG-----RAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~-----~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
..+.+++.+.||+|+||+||+|.++.. ..||||+++... ....+|.+|+.+|++++|||||+++|++.+.+..
T Consensus 5 ~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~ 84 (283)
T d1mqba_ 5 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 84 (283)
T ss_dssp CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred CHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCce
Confidence 345677888999999999999996542 479999996533 3345789999999999999999999999999999
Q ss_pred EEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~ 595 (736)
++|||||.+++|.+++... ..+++.++..++.||++||+|||+. ++.+||+|||+|+.+....
T Consensus 85 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~ 164 (283)
T d1mqba_ 85 MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 164 (283)
T ss_dssp EEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred EEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCC
Confidence 9999999999999987654 4799999999999999999999965 4478999999998775543
Q ss_pred Ccc-eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 596 NSS-QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 596 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
... ......||+.|||||++.+..++.++|||||||++|||+++..|+...... ..+.. .+.
T Consensus 165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~--------~~~~~----~i~----- 227 (283)
T d1mqba_ 165 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--------HEVMK----AIN----- 227 (283)
T ss_dssp ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHH----HHH-----
T ss_pred ccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH--------HHHHH----HHh-----
Confidence 222 233456899999999999999999999999999999999977666432111 11111 111
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
...+...+...+..+.+|+.+||+.||++||||.||+++|+.+.+.
T Consensus 228 -------~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 228 -------DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp -------TTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -------ccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 1112223334556789999999999999999999999999987543
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-43 Score=361.76 Aligned_cols=231 Identities=24% Similarity=0.308 Sum_probs=182.9
Q ss_pred cccCeeceeEEEEeeeCC---CcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCCC
Q 041821 468 EELGRGGSGAVYKGVLAD---GRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 541 (736)
++||+|+||+||+|.+++ ++.||||+++... ...++|.+|+++|++++|||||+++|+|.+ +..+||||||++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 369999999999998543 4689999996432 234679999999999999999999999965 457899999999
Q ss_pred CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcc-eeeccc
Q 041821 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSS-QFSQIR 604 (736)
Q Consensus 542 gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~-~~~~~~ 604 (736)
|+|.+++.....+++.++..++.||++||+|||+++ ..+||+|||+++.+....... ......
T Consensus 92 g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~ 171 (277)
T d1xbba_ 92 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171 (277)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----C
T ss_pred CcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccccccccccC
Confidence 999999998888999999999999999999999763 368999999999776543332 223467
Q ss_pred ccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 605 gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
||+.|||||++.+..++.++|||||||++|||++ |+.||..... . .+. ..+..+
T Consensus 172 gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~------~---~~~----~~i~~~------------ 226 (277)
T d1xbba_ 172 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG------S---EVT----AMLEKG------------ 226 (277)
T ss_dssp CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH------H---HHH----HHHHTT------------
T ss_pred CCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCH------H---HHH----HHHHcC------------
Confidence 8999999999999999999999999999999998 8999864321 1 111 111111
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.+...+...+..+.+|+.+||+.||++|||+++|+++|+..
T Consensus 227 ~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 227 ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence 11222334456788999999999999999999999988765
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.2e-43 Score=367.80 Aligned_cols=235 Identities=24% Similarity=0.321 Sum_probs=176.1
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
.+.|++.+.||+|+||+||+|+. .+++.||||++.... ...+.+.+|+.+|++++|||||++++++.+++..+||||
T Consensus 8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE 87 (307)
T d1a06a_ 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ 87 (307)
T ss_dssp GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 35689999999999999999995 458999999996532 334568899999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC-------------------CccEEcccCcccccCCCCCcc
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE-------------------FEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-------------------~~~kl~DFGla~~~~~~~~~~ 598 (736)
||++|+|.+++.....+++.++..++.||+.||.|||+++ ..+||+|||+|+.......
T Consensus 88 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~-- 165 (307)
T d1a06a_ 88 LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV-- 165 (307)
T ss_dssp CCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-------------
T ss_pred ccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCe--
Confidence 9999999999988889999999999999999999999652 3689999999987654332
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEE 678 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (736)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||..... ..... .+....
T Consensus 166 -~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~---------~~~~~----~i~~~~------ 225 (307)
T d1a06a_ 166 -LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND---------AKLFE----QILKAE------ 225 (307)
T ss_dssp --------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---------HHHHH----HHHTTC------
T ss_pred -eeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCH---------HHHHH----HHhccC------
Confidence 3456799999999999999999999999999999999999999974321 11111 111111
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 679 IVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 679 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...........++.+.+|+.+||+.||++|||+.|+++|
T Consensus 226 ---~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 226 ---YEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp ---CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ---CCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 011111222344678999999999999999999999986
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-43 Score=359.16 Aligned_cols=229 Identities=24% Similarity=0.333 Sum_probs=181.4
Q ss_pred hhcccccCeeceeEEEEeeeC-CCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEe----CCeEEEE
Q 041821 464 KSFKEELGRGGSGAVYKGVLA-DGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE----GRHRLLI 535 (736)
Q Consensus 464 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv 535 (736)
+++.++||+|+||+||+|+.. +++.||+|++.... ...+.+.+|+++|++++|||||++++++.+ ....+||
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv 90 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 90 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence 367778999999999999954 58899999986532 334668999999999999999999999875 4567999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC--C-----------------ccEEcccCcccccCCCCC
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE--F-----------------EPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~--~-----------------~~kl~DFGla~~~~~~~~ 596 (736)
||||++|+|.+++.+...+++..+..++.||++||+|||+++ + .+||+|||+|+......
T Consensus 91 mE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~- 169 (270)
T d1t4ha_ 91 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF- 169 (270)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS-
T ss_pred EeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCc-
Confidence 999999999999988788999999999999999999999764 2 68999999998654322
Q ss_pred cceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
....+||+.|||||++.+ .++.++|||||||++|||++|+.||..... . .. ..+.+..+.
T Consensus 170 ---~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~-----~---~~----~~~~i~~~~---- 229 (270)
T d1t4ha_ 170 ---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-----A---AQ----IYRRVTSGV---- 229 (270)
T ss_dssp ---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----H---HH----HHHHHTTTC----
T ss_pred ---cCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCccc-----H---HH----HHHHHHcCC----
Confidence 345689999999999875 599999999999999999999999963211 0 11 111111111
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
..+.+ +...++.+.+|+.+||+.||++|||+.|+++|
T Consensus 230 ---~~~~~----~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H 266 (270)
T d1t4ha_ 230 ---KPASF----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 266 (270)
T ss_dssp ---CCGGG----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ---CCccc----CccCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence 00111 11123468899999999999999999999875
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-43 Score=362.26 Aligned_cols=233 Identities=22% Similarity=0.305 Sum_probs=190.1
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
.+|++.++||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+.+|++++|||||++++++.+++..+||||||
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~ 99 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence 4688999999999999999994 569999999996543 45677899999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceeecc
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
++|+|.+++.+. .+++.++..++.||+.||.|||++ +..+||+|||+|+.+...... ....
T Consensus 100 ~gg~L~~~~~~~-~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~--~~~~ 176 (293)
T d1yhwa1 100 AGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTM 176 (293)
T ss_dssp TTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC--BCCC
T ss_pred CCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeecccccc--cccc
Confidence 999999988654 699999999999999999999975 347899999999977544322 4456
Q ss_pred cccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccccCc
Q 041821 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPR 683 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (736)
+||+.|||||++.+..|+.++|||||||++|||++|+.||..... .. ....... .. .+.
T Consensus 177 ~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~--------~~-~~~~~~~---~~---------~~~ 235 (293)
T d1yhwa1 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--------LR-ALYLIAT---NG---------TPE 235 (293)
T ss_dssp CSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HH-HHHHHHH---HC---------SCC
T ss_pred ccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCH--------HH-HHHHHHh---CC---------CCC
Confidence 799999999999999999999999999999999999999963211 00 1111100 00 000
Q ss_pred cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 684 LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 684 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+...+..+.+|+.+||+.||++|||+.|+++|
T Consensus 236 --~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H 270 (293)
T d1yhwa1 236 --LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (293)
T ss_dssp --CSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred --CCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11223345678899999999999999999999875
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-43 Score=361.78 Aligned_cols=233 Identities=20% Similarity=0.281 Sum_probs=181.1
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEe--CCeEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE--GRHRLL 534 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 534 (736)
.+.|++.+.||+|+||+||+|+. .+|+.||||++.... ...+.+.+|+++|++++|||||++++++.+ ++..+|
T Consensus 3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i 82 (269)
T d2java1 3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 82 (269)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence 35789999999999999999995 568999999996543 234568899999999999999999999965 456899
Q ss_pred EEecCCCCCHhhhccc----CCCCCHHHHHHHHHHHHHHhhhhhcC---------------------CCccEEcccCccc
Q 041821 535 IYEYVEKQSLDKHLFS----SYFLGWKERFKVALGTAKGLAYLHHD---------------------EFEPKIADFGLAK 589 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~gL~yLH~~---------------------~~~~kl~DFGla~ 589 (736)
|||||++|+|.+++.. ...+++..++.++.||+.||.|||++ +..+||+|||+|+
T Consensus 83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~ 162 (269)
T d2java1 83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 162 (269)
T ss_dssp EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence 9999999999999864 34799999999999999999999953 3378999999999
Q ss_pred ccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHh
Q 041821 590 LSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669 (736)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (736)
.+..... ......||+.|||||++.+..|+.++|||||||++|||++|+.||..... ..+. ..+.
T Consensus 163 ~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~---------~~~~----~~i~ 227 (269)
T d2java1 163 ILNHDTS--FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---------KELA----GKIR 227 (269)
T ss_dssp HC-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH---------HHHH----HHHH
T ss_pred ecccCCC--ccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCH---------HHHH----HHHH
Confidence 8755332 23457899999999999999999999999999999999999999964311 1111 1111
Q ss_pred hhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 670 YEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 670 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+. .. ..+...++.+.+|+.+||+.||++|||++||++|
T Consensus 228 ~~~---~~---------~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h 266 (269)
T d2java1 228 EGK---FR---------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 266 (269)
T ss_dssp HTC---CC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cCC---CC---------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 111 11 1122334578899999999999999999999864
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-43 Score=363.66 Aligned_cols=233 Identities=19% Similarity=0.191 Sum_probs=187.6
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
++|++.+.||+|+||+||+|+. .+++.||||++.+. ....+.+.+|+++|++++|||||++++++.+++..+|||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 5689999999999999999995 46899999999642 234567899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|||++|+|.+++...+.+++..+..++.|++.||+|||+. +..+||+|||+|+.+.........
T Consensus 88 Ey~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~ 167 (288)
T d1uu3a_ 88 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 167 (288)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred EccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCccccc
Confidence 9999999999998888899999999999999999999965 347899999999987655444445
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...+||+.|||||++.+..|+.++|||||||++|||++|+.||..... ... ...+....
T Consensus 168 ~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~---------~~~----~~~i~~~~-------- 226 (288)
T d1uu3a_ 168 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE---------YLI----FQKIIKLE-------- 226 (288)
T ss_dssp --CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHH----HHHHHTTC--------
T ss_pred ccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCH---------HHH----HHHHHcCC--------
Confidence 567899999999999999999999999999999999999999974311 111 11111111
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. .++...+..+.+|+.+||+.||++|||++|++++
T Consensus 227 -~----~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~ 261 (288)
T d1uu3a_ 227 -Y----DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 261 (288)
T ss_dssp -C----CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCH
T ss_pred -C----CCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCC
Confidence 0 1222334578899999999999999999987543
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-43 Score=369.33 Aligned_cols=184 Identities=24% Similarity=0.263 Sum_probs=161.8
Q ss_pred HHHhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
|..++|++.++||+|+||+||+|+. .+++.||||+++.. ....+.+.+|+.+|++++|||||+++++|.+.+..+||
T Consensus 3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iV 82 (322)
T d1s9ja_ 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 82 (322)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 4567899999999999999999995 56899999999653 23356789999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEcccCcccccCCCCCcc
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~~~~~~~~~~ 598 (736)
||||++|+|.+++.+...+++..+..++.|+++||.|||++ +..+||+|||+|+......
T Consensus 83 mEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~--- 159 (322)
T d1s9ja_ 83 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 159 (322)
T ss_dssp EECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHT---
T ss_pred EEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCc---
Confidence 99999999999998877899999999999999999999953 3378999999998764322
Q ss_pred eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCcc
Q 041821 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWV 646 (736)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~ 646 (736)
....+||+.|||||++.+.+|+.++||||+||++|||++|+.||...
T Consensus 160 -~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~ 206 (322)
T d1s9ja_ 160 -ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206 (322)
T ss_dssp -C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCC
T ss_pred -cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 34568999999999999999999999999999999999999999753
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.1e-42 Score=362.57 Aligned_cols=230 Identities=25% Similarity=0.267 Sum_probs=185.0
Q ss_pred HhhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 535 (736)
...|+..++||+|+||+||+|+. .+++.||||++.... ...+.+.+|+.+|++++|||||++++++.+++..+||
T Consensus 14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 93 (309)
T d1u5ra_ 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (309)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEE
Confidence 35688899999999999999994 568899999996532 2335688999999999999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
||||++|+|..++.....+++.++..++.||+.||.|||+++ ..+||+|||+|+....
T Consensus 94 ~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~------ 167 (309)
T d1u5ra_ 94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------ 167 (309)
T ss_dssp EECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS------
T ss_pred EEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCC------
Confidence 999999999888777778999999999999999999999763 3689999999986543
Q ss_pred eecccccCcccChhcccC---CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 600 FSQIRGTKGYMAPEWASN---LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
.....||+.|||||++.+ ..|+.++|||||||++|||++|+.||..... . .... .+....
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~-----~----~~~~----~i~~~~---- 230 (309)
T d1u5ra_ 168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----M----SALY----HIAQNE---- 230 (309)
T ss_dssp BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----H----HHHH----HHHHSC----
T ss_pred CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH-----H----HHHH----HHHhCC----
Confidence 234579999999999864 4689999999999999999999999863211 0 0111 111110
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.+.+ .+...++.+.+|+.+||+.||++|||++|+++|
T Consensus 231 ----~~~~---~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H 267 (309)
T d1u5ra_ 231 ----SPAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (309)
T ss_dssp ----CCCC---SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred ----CCCC---CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence 1111 112234578899999999999999999999874
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=9.8e-43 Score=363.09 Aligned_cols=243 Identities=23% Similarity=0.279 Sum_probs=193.0
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR 530 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 530 (736)
+..+.|++.++||+|+||+||+|+.. +++.||||+++... +..++|.+|+++|++++||||++++++|.+.+
T Consensus 10 ~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~ 89 (301)
T d1lufa_ 10 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 89 (301)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred CCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCC
Confidence 34567899999999999999999853 35789999997543 33567999999999999999999999999999
Q ss_pred eEEEEEecCCCCCHhhhcccCC------------------------CCCHHHHHHHHHHHHHHhhhhhcCC---------
Q 041821 531 HRLLIYEYVEKQSLDKHLFSSY------------------------FLGWKERFKVALGTAKGLAYLHHDE--------- 577 (736)
Q Consensus 531 ~~~lv~e~~~~gsL~~~l~~~~------------------------~l~~~~~~~i~~~i~~gL~yLH~~~--------- 577 (736)
..++||||+++|+|.+++.... .+++..++.|+.|+++||+|||+.+
T Consensus 90 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~ 169 (301)
T d1lufa_ 90 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATR 169 (301)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred ceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEccc
Confidence 9999999999999999986421 4889999999999999999999753
Q ss_pred -------CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCC-CCCCccccC
Q 041821 578 -------FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI-RLSNWVVED 649 (736)
Q Consensus 578 -------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~-~p~~~~~~~ 649 (736)
+.+||+|||+|+...............||+.|||||.+.+..|+.++|||||||++|||++|. +||.....
T Consensus 170 NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~- 248 (301)
T d1lufa_ 170 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH- 248 (301)
T ss_dssp GEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-
T ss_pred ceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCH-
Confidence 378999999998765544443345567899999999999999999999999999999999996 45543211
Q ss_pred CccchhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 650 GEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
. .... .+..+. ....+...+..+.+|+.+||+.||++||||.||+++|+++.+
T Consensus 249 -----~---e~~~----~v~~~~------------~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~ 301 (301)
T d1lufa_ 249 -----E---EVIY----YVRDGN------------ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301 (301)
T ss_dssp -----H---HHHH----HHHTTC------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -----H---HHHH----HHHcCC------------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 1 1111 111111 112233344678999999999999999999999999998864
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-43 Score=356.09 Aligned_cols=235 Identities=25% Similarity=0.321 Sum_probs=181.4
Q ss_pred HHhhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEe-CCeEEEEEec
Q 041821 460 KKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE-GRHRLLIYEY 538 (736)
Q Consensus 460 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~ 538 (736)
..+++++.+.||+|+||.||+|+. .|+.||||+++.. ...+.+.+|+++|++++|||||+++|+|.+ .+..+|||||
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey 82 (262)
T d1byga_ 5 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 82 (262)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC-C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred CHHHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence 345678899999999999999998 4789999999754 345678999999999999999999999865 4568999999
Q ss_pred CCCCCHhhhcccCC--CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCccee
Q 041821 539 VEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 539 ~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
+++|+|.++|.... .+++..++.|+.||+.||.|||+. +..+||+|||+++..... .
T Consensus 83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~-----~ 157 (262)
T d1byga_ 83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-----Q 157 (262)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-------------
T ss_pred cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCC-----C
Confidence 99999999997543 589999999999999999999976 347899999999865432 2
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....+|+.|+|||++.+..++.++|||||||++|||++ |+.|+..... ..+...+ .
T Consensus 158 ~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~---------~~~~~~i----~---------- 214 (262)
T d1byga_ 158 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---------KDVVPRV----E---------- 214 (262)
T ss_dssp ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG---------GGHHHHH----T----------
T ss_pred ccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCH---------HHHHHHH----H----------
Confidence 33468999999999999999999999999999999998 5666653211 1111111 1
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
...+.+.+...+..+.+|+.+||+.||++||||.+|+++|+.+..
T Consensus 215 --~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~ 259 (262)
T d1byga_ 215 --KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 259 (262)
T ss_dssp --TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --cCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence 111222333445678899999999999999999999999998753
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-43 Score=360.73 Aligned_cols=234 Identities=21% Similarity=0.265 Sum_probs=186.6
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc-cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL-HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
+.|++.+.||+|+||+||+|+. .+++.||||+++.. ....+.+.+|+++|++++|||||++++++.+++..+||||||
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~ 91 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 91 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence 3578899999999999999995 46899999999653 344567899999999999999999999999999999999999
Q ss_pred CCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcceeec
Q 041821 540 EKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 540 ~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
++|+|.+++.+ ...+++.++..++.||++||.|||++ +..+||+|||+|+...... .....
T Consensus 92 ~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~--~~~~~ 169 (288)
T d2jfla1 92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--QRRDS 169 (288)
T ss_dssp TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHH--HHHTC
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCc--ccccc
Confidence 99999998765 45799999999999999999999965 3478999999997653321 11335
Q ss_pred ccccCcccChhccc-----CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccc
Q 041821 603 IRGTKGYMAPEWAS-----NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIE 677 (736)
Q Consensus 603 ~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (736)
..||+.|||||++. +..|+.++|||||||++|||++|+.||...... . ....+ .... .
T Consensus 170 ~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~-----~----~~~~i----~~~~---~- 232 (288)
T d2jfla1 170 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM-----R----VLLKI----AKSE---P- 232 (288)
T ss_dssp CCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGG-----G----HHHHH----HHSC---C-
T ss_pred cccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHH-----H----HHHHH----HcCC---C-
Confidence 67999999999984 456899999999999999999999999743211 1 11111 1110 0
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 678 EIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 678 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+. ...+...+..+.+|+.+||+.||++|||++|+++|
T Consensus 233 ----~~--~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h 269 (288)
T d2jfla1 233 ----PT--LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH 269 (288)
T ss_dssp ----CC--CSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ----CC--CCccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00 11123345678899999999999999999999875
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.7e-43 Score=357.97 Aligned_cols=243 Identities=23% Similarity=0.312 Sum_probs=182.5
Q ss_pred HHHhhhhcccccCeeceeEEEEeeeCC----CcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 459 LKKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 459 i~~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
|..+.|++.+.||+|+||.||+|+... +..||||.++... ...+.+.+|+.+|++++|||||+++|++. .+..
T Consensus 4 i~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 82 (273)
T d1mp8a_ 4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 82 (273)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred cCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeE
Confidence 456789999999999999999998543 3568999986533 33567999999999999999999999986 4678
Q ss_pred EEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
++||||+++|+|.+++... ..+++..++.++.||++||.|||+++ ..+||+|||+|+.+....
T Consensus 83 ~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~ 162 (273)
T d1mp8a_ 83 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162 (273)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCc
Confidence 9999999999999987654 47999999999999999999999763 378999999998765433
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
.. ......||+.|||||++.+..++.++|||||||++|||++ |.+||...... .+.. .+..+.
T Consensus 163 ~~-~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~---------~~~~----~i~~~~-- 226 (273)
T d1mp8a_ 163 YY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---------DVIG----RIENGE-- 226 (273)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---------GHHH----HHHTTC--
T ss_pred ce-eccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH---------HHHH----HHHcCC--
Confidence 22 2345678999999999999999999999999999999998 78888643211 1111 111111
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
....+...+..+.+|+.+||+.||++|||+.||+++|+.+.++.
T Consensus 227 ----------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~ 270 (273)
T d1mp8a_ 227 ----------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 270 (273)
T ss_dssp ----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----------CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 11223344567899999999999999999999999999886543
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-42 Score=357.40 Aligned_cols=234 Identities=24% Similarity=0.258 Sum_probs=189.9
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc-------cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL-------HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
+.|++.+.||+|+||+||+|+. .+|+.||||++++. ....+.+.+|+.+|++++|||||++++++.+.+..+
T Consensus 10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 89 (293)
T d1jksa_ 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 89 (293)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 5689999999999999999995 56899999998542 123577999999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC--------------------ccEEcccCcccccCC
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF--------------------EPKIADFGLAKLSQR 593 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~--------------------~~kl~DFGla~~~~~ 593 (736)
||||||++|+|.+++.....+++..++.++.||+.||+|||+.++ .+||+|||+|+....
T Consensus 90 iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~ 169 (293)
T d1jksa_ 90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 169 (293)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTT
T ss_pred EEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCC
Confidence 999999999999999887789999999999999999999997522 489999999988755
Q ss_pred CCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
... .....||+.|||||++.+..++.++|||||||++|||++|+.||..... ..... .+....
T Consensus 170 ~~~---~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~---------~~~~~----~i~~~~- 232 (293)
T d1jksa_ 170 GNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK---------QETLA----NVSAVN- 232 (293)
T ss_dssp SCB---CSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHH----HHHTTC-
T ss_pred Ccc---ccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCH---------HHHHH----HHHhcC-
Confidence 432 3456799999999999999999999999999999999999999974321 01111 111110
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.......+...+..+.+|+.+||+.||++|||++|+++|
T Consensus 233 --------~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 271 (293)
T d1jksa_ 233 --------YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271 (293)
T ss_dssp --------CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --------CCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000000011224578899999999999999999999985
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=5.7e-42 Score=363.30 Aligned_cols=234 Identities=21% Similarity=0.265 Sum_probs=190.5
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
++|++.+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+.+|++++|||||++++++.+++..+||||||
T Consensus 26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~ 105 (350)
T d1koaa2 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 105 (350)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 4789999999999999999995 468999999997644 34567889999999999999999999999999999999999
Q ss_pred CCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC------------------CccEEcccCcccccCCCCCccee
Q 041821 540 EKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE------------------FEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 540 ~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~------------------~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
++|+|.+++.. ...+++.++..|+.||+.||.|||+++ ..+||+|||+|+.+..... .
T Consensus 106 ~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~---~ 182 (350)
T d1koaa2 106 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS---V 182 (350)
T ss_dssp CSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSC---E
T ss_pred CCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccc---c
Confidence 99999999864 447999999999999999999999652 3689999999998765432 4
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
....||+.|||||++.+..++.++|||||||++|||++|+.||..... ......+ ....
T Consensus 183 ~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~---------~~~~~~i----~~~~-------- 241 (350)
T d1koaa2 183 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND---------DETLRNV----KSCD-------- 241 (350)
T ss_dssp EEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHH----HHTC--------
T ss_pred ceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH---------HHHHHHH----HhCC--------
Confidence 456799999999999999999999999999999999999999964321 1111111 1111
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...........++.+.+|+.+||+.||++|||++|+++|
T Consensus 242 -~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 242 -WNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp -CCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred -CCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000011112234578899999999999999999999987
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-42 Score=360.67 Aligned_cols=239 Identities=22% Similarity=0.282 Sum_probs=185.3
Q ss_pred hhhhcccccCeeceeEEEEeeeC-CCc----EEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLA-DGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL 534 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 534 (736)
.+|++.++||+|+||+||+|+.. +|+ +||||+++.. .+..++|.+|+.+|++++|||||+++|+|.++ ..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence 45888999999999999999853 343 6899998643 34567899999999999999999999999875 5678
Q ss_pred EEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCc
Q 041821 535 IYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~ 597 (736)
++||+.+|+|.+++... ..+++..++.++.||++||+|||+++ ..+||+|||+|+........
T Consensus 88 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~ 167 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 167 (317)
T ss_dssp EEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC-
T ss_pred EEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceeccccccc
Confidence 88999999999887764 47999999999999999999999763 37899999999987765554
Q ss_pred ceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
.......||+.|||||++.+..|+.++|||||||++|||+| |.+||..... .. +...+. .+
T Consensus 168 ~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~------~~---~~~~i~----~~----- 229 (317)
T d1xkka_ 168 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA------SE---ISSILE----KG----- 229 (317)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCG------GG---HHHHHH----HT-----
T ss_pred ccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCH------HH---HHHHHH----cC-----
Confidence 44555679999999999999999999999999999999998 6777763321 11 111111 11
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECET 726 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (736)
.+...+...+..+.+|+.+||+.||++|||+.||+++|+.+..
T Consensus 230 -------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~ 272 (317)
T d1xkka_ 230 -------ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 272 (317)
T ss_dssp -------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------CCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence 1112233445678999999999999999999999999987643
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-42 Score=361.86 Aligned_cols=247 Identities=28% Similarity=0.351 Sum_probs=198.2
Q ss_pred HHHHhhhhcccccCeeceeEEEEeee------CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE 528 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 528 (736)
|+..+.+++.++||+|+||.||+|++ .+++.||||+++... .....+.+|+.+++++ +|||||+++|+|.+
T Consensus 19 ~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~ 98 (311)
T d1t46a_ 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98 (311)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEee
Confidence 56778899999999999999999974 235789999997543 3445789999999999 69999999999999
Q ss_pred CCeEEEEEecCCCCCHhhhcccCC------------------CCCHHHHHHHHHHHHHHhhhhhcCCC------------
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFSSY------------------FLGWKERFKVALGTAKGLAYLHHDEF------------ 578 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~~~------------------~l~~~~~~~i~~~i~~gL~yLH~~~~------------ 578 (736)
.+..+||||||++|+|.++++... .+++..+..++.||++||+|||++++
T Consensus 99 ~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~ 178 (311)
T d1t46a_ 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL 178 (311)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred CCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccc
Confidence 999999999999999999986432 58999999999999999999997643
Q ss_pred ----ccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccch
Q 041821 579 ----EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQE 654 (736)
Q Consensus 579 ----~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~ 654 (736)
.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||++++.|+.......
T Consensus 179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~---- 254 (311)
T d1t46a_ 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD---- 254 (311)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS----
T ss_pred cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHH----
Confidence 679999999998776555544556789999999999999999999999999999999999555543222111
Q ss_pred hHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 655 AELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
..+..+ +....+...+...+..+.+|+.+||+.||++||||++|+++|+++..+
T Consensus 255 ~~~~~~-------------------i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~ 308 (311)
T d1t46a_ 255 SKFYKM-------------------IKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (311)
T ss_dssp HHHHHH-------------------HHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHH-------------------HhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence 111111 111111222333456789999999999999999999999999987655
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-42 Score=358.58 Aligned_cols=243 Identities=24% Similarity=0.313 Sum_probs=189.5
Q ss_pred hhhhcccccCeeceeEEEEeeeCC-Cc--EEEEEEeCcc--cccHHHHHHHHHHHhcC-CCCceeeEEEEEEeCCeEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVLAD-GR--AVAVKRLGDL--HQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~--~vavK~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 535 (736)
+.+++.++||+|+||+||+|++.+ +. .||||+++.. ....+.|.+|+++|+++ +|||||+++|+|.+.+..+||
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV 89 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 89 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence 567888999999999999999644 43 5788888542 33456799999999999 799999999999999999999
Q ss_pred EecCCCCCHhhhcccC----------------CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEc
Q 041821 536 YEYVEKQSLDKHLFSS----------------YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIA 583 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~ 583 (736)
|||+++|+|.++|+.. ..+++..+..++.||++||.|||+.+ ..+||+
T Consensus 90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~ 169 (309)
T d1fvra_ 90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 169 (309)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEc
Confidence 9999999999999654 46899999999999999999999763 378999
Q ss_pred ccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCC-CCCccccCCccchhHHHHHHH
Q 041821 584 DFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIR-LSNWVVEDGEGQEAELKRFVR 662 (736)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~-p~~~~~~~~~~~~~~~~~~~~ 662 (736)
|||+|+....... .....||..|+|||.+.+..++.++|||||||++|||++|.. ||.... ...+
T Consensus 170 DfG~a~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~---------~~~~-- 235 (309)
T d1fvra_ 170 DFGLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT---------CAEL-- 235 (309)
T ss_dssp CTTCEESSCEECC---C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC---------HHHH--
T ss_pred ccccccccccccc---ccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCC---------HHHH--
Confidence 9999986543322 234568999999999999999999999999999999999765 454221 0111
Q ss_pred HHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccccccc
Q 041821 663 EVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEIHI 732 (736)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 732 (736)
...+.. ..+...+...+..+.+|+.+||+.||++||||+||+++|+++.++....+
T Consensus 236 --~~~i~~------------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~~~~~ 291 (309)
T d1fvra_ 236 --YEKLPQ------------GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYV 291 (309)
T ss_dssp --HHHGGG------------TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCSB
T ss_pred --HHHHHh------------cCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCcCCC
Confidence 111111 11122333455689999999999999999999999999999876655443
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-41 Score=353.17 Aligned_cols=241 Identities=24% Similarity=0.313 Sum_probs=188.4
Q ss_pred hhhcccccCeeceeEEEEeeeCCC----cEEEEEEeCcc--cccHHHHHHHHHHHhcCCCCceeeEEEEEEe-CCeEEEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVLADG----RAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE-GRHRLLI 535 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~~~~----~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv 535 (736)
+++|.++||+|+||+||+|++.++ ..||||+++.. ....++|.+|+++|++++|||||+++|++.+ +...++|
T Consensus 28 ~~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv 107 (311)
T d1r0pa_ 28 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 107 (311)
T ss_dssp EEEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEE
T ss_pred eeccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEE
Confidence 345678899999999999996442 36899999753 3344779999999999999999999999876 4588999
Q ss_pred EecCCCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcc
Q 041821 536 YEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~ 598 (736)
||||++|+|.+++.... .+++..++.++.|+++||.|||+. +..+||+|||+++.........
T Consensus 108 ~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~ 187 (311)
T d1r0pa_ 108 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 187 (311)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCC
T ss_pred EEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhcccccccc
Confidence 99999999999987654 688999999999999999999975 3478999999998775543222
Q ss_pred --eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 599 --QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 599 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
......||+.|+|||.+....++.++||||||+++|||++|+.||.......+ +.. .+..+.
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~--------~~~----~i~~g~---- 251 (311)
T d1r0pa_ 188 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--------ITV----YLLQGR---- 251 (311)
T ss_dssp TTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--------------CHH----HHHTTC----
T ss_pred ceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHH--------HHH----HHHcCC----
Confidence 22345789999999999999999999999999999999998888764321111 111 111111
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
+...+...+..+.+|+.+||+.||++||||.||+++|+++...
T Consensus 252 --------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 252 --------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 294 (311)
T ss_dssp --------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred --------CCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 1112223346788999999999999999999999999988654
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=5e-41 Score=356.27 Aligned_cols=234 Identities=19% Similarity=0.215 Sum_probs=190.9
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
+.|++.+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+.+|++++|||||++++++.+++..+||||||
T Consensus 29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~ 108 (352)
T d1koba_ 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 108 (352)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 4689999999999999999995 569999999996543 34567889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcC------------------CCccEEcccCcccccCCCCCccee
Q 041821 540 EKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHD------------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 540 ~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~------------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
++|+|.+++.... .+++.++..|+.||+.||.|||+. +..+||+|||+|+.+..... .
T Consensus 109 ~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~---~ 185 (352)
T d1koba_ 109 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI---V 185 (352)
T ss_dssp CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC---E
T ss_pred CCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCc---e
Confidence 9999998876654 799999999999999999999965 23689999999998765432 4
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
....||+.|||||++.+..++.++|||||||++|||++|+.||..... ......+ ....
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~---------~~~~~~i----~~~~-------- 244 (352)
T d1koba_ 186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD---------LETLQNV----KRCD-------- 244 (352)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH---------HHHHHHH----HHCC--------
T ss_pred eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHH----HhCC--------
Confidence 456799999999999999999999999999999999999999964321 1111111 1110
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...........+..+.+|+.+||+.||.+|||+.|+++|
T Consensus 245 -~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 245 -WEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp -CCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred -CCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 011111222344678899999999999999999999986
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-42 Score=357.99 Aligned_cols=246 Identities=25% Similarity=0.326 Sum_probs=184.4
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEEEe
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE 528 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 528 (736)
||..+.|++.++||+|+||.||+|+.. +++.||||+++... ...+.+.+|+.++.++ +|+|||++++++.+
T Consensus 9 ei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~ 88 (299)
T d1ywna1 9 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 88 (299)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeecc
Confidence 466678999999999999999999843 24689999997532 3446678888888777 68999999999876
Q ss_pred C-CeEEEEEecCCCCCHhhhcccC----------------CCCCHHHHHHHHHHHHHHhhhhhcCCC-------------
Q 041821 529 G-RHRLLIYEYVEKQSLDKHLFSS----------------YFLGWKERFKVALGTAKGLAYLHHDEF------------- 578 (736)
Q Consensus 529 ~-~~~~lv~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~i~~gL~yLH~~~~------------- 578 (736)
. ...++|||||++|+|.++|+.. ..+++.+++.++.||++||.|||++++
T Consensus 89 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~ 168 (299)
T d1ywna1 89 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 168 (299)
T ss_dssp TTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred CCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeEC
Confidence 4 4689999999999999998643 248999999999999999999997633
Q ss_pred ---ccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCC-CCCccccCCccch
Q 041821 579 ---EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIR-LSNWVVEDGEGQE 654 (736)
Q Consensus 579 ---~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~-p~~~~~~~~~~~~ 654 (736)
.+||+|||+|+...............||+.|||||++.+..++.++|||||||++|||++|.. ||......
T Consensus 169 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~----- 243 (299)
T d1ywna1 169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----- 243 (299)
T ss_dssp GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-----
T ss_pred CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH-----
Confidence 789999999987765554444456789999999999999999999999999999999999754 56432211
Q ss_pred hHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccc
Q 041821 655 AELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETE 727 (736)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (736)
.. +...+ ..+ .....+...+..+.+++.+||+.||++|||++||+++|+++.+.
T Consensus 244 ~~---~~~~~----~~~------------~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~ 297 (299)
T d1ywna1 244 EE---FCRRL----KEG------------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 297 (299)
T ss_dssp HH---HHHHH----HHT------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HH---HHHHH----hcC------------CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 11 11111 111 11122233445789999999999999999999999999988653
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-42 Score=351.04 Aligned_cols=239 Identities=22% Similarity=0.274 Sum_probs=179.6
Q ss_pred HhhhhcccccCeeceeEEEEeeeCC--C--cEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeE
Q 041821 461 KSTKSFKEELGRGGSGAVYKGVLAD--G--RAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR 532 (736)
Q Consensus 461 ~~~~~~~~~lG~G~fg~Vy~~~~~~--~--~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 532 (736)
..+|++.+.||+|+||.||+|+... + ..||||+++.. .+..+.|.+|+.+|++++|||||+++|++.+ +..
T Consensus 7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~ 85 (273)
T d1u46a_ 7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPM 85 (273)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cch
Confidence 4568899999999999999998532 2 37899998653 2334679999999999999999999999976 467
Q ss_pred EEEEecCCCCCHhhhcccC-CCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
++|||||++|+|.+++... ..+++..++.++.||++||.|||+++ ..+||+|||+++.+....
T Consensus 86 ~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~ 165 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165 (273)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred heeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCC
Confidence 8999999999999887654 47999999999999999999999763 378999999999876554
Q ss_pred Ccce-eecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 596 NSSQ-FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 596 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
.... .....|+..|+|||.+.+..++.++|||||||++|||++ |+.||..... ......+
T Consensus 166 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~---------~~~~~~i--------- 227 (273)
T d1u46a_ 166 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG---------SQILHKI--------- 227 (273)
T ss_dssp CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH---------HHHHHHH---------
T ss_pred CcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCH---------HHHHHHH---------
Confidence 3322 234567889999999999999999999999999999998 8999863321 1111111
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLEC 724 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (736)
.....+.+.+...+..+.+|+.+||+.||++||||.||++.|++.
T Consensus 228 ------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 228 ------DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp ------HTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ------HhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 111111122333446788999999999999999999999999764
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-41 Score=351.57 Aligned_cols=231 Identities=23% Similarity=0.217 Sum_probs=191.3
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|++.+.||+|+||.||+|+. .+++.||||++++. ....+.+.+|+.+|++++|||||++++++.+.+..++||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ 84 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence 4688999999999999999995 56999999999653 234577899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|||++|+|.+++.....+++..++.++.||+.||+|||++ +..+||+|||+|+....... ..
T Consensus 85 ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~--~~ 162 (337)
T d1o6la_ 85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TM 162 (337)
T ss_dssp ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC--CB
T ss_pred eccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCCc--cc
Confidence 9999999999999888899999999999999999999975 34789999999987654332 24
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...+||+.|||||++.+..|+.++||||+||++|||++|++||..... ..+. +.+....
T Consensus 163 ~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~---------~~~~----~~i~~~~-------- 221 (337)
T d1o6la_ 163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---------ERLF----ELILMEE-------- 221 (337)
T ss_dssp CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHH----HHHHHCC--------
T ss_pred ccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCH---------HHHH----HHHhcCC--------
Confidence 567899999999999999999999999999999999999999974321 1111 1111111
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT-----MDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 720 (736)
..++...+..+.+|+.+||+.||++||+ +.||++|
T Consensus 222 -----~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 222 -----IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -----CCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence 1122234457889999999999999995 8888875
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-41 Score=352.14 Aligned_cols=234 Identities=19% Similarity=0.257 Sum_probs=190.9
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecCC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVE 540 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 540 (736)
++|.+.+.||+|+||+||+|+. .+++.||||.++........+.+|+++|++++|||||++++++.+++..|||||||+
T Consensus 5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~ 84 (321)
T d1tkia_ 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS 84 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCC
Confidence 4688999999999999999995 468899999998766666778999999999999999999999999999999999999
Q ss_pred CCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCC------------------CccEEcccCcccccCCCCCcceee
Q 041821 541 KQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDE------------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 541 ~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~------------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
+|+|.+++.... .+++.++..++.||+.||.|||+.+ ..+||+|||+++....... ..
T Consensus 85 gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~---~~ 161 (321)
T d1tkia_ 85 GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN---FR 161 (321)
T ss_dssp CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE---EE
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCc---cc
Confidence 999999998765 7999999999999999999999652 2689999999987654332 44
Q ss_pred cccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccccc
Q 041821 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 681 (736)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+ ..... ..+
T Consensus 162 ~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~---------~~~~~~i----~~~~~-----~~~ 223 (321)
T d1tkia_ 162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN---------QQIIENI----MNAEY-----TFD 223 (321)
T ss_dssp EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH---------HHHHHHH----HHTCC-----CCC
T ss_pred ccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCH---------HHHHHHH----HhCCC-----CCC
Confidence 56799999999999999999999999999999999999999974321 1111111 11110 000
Q ss_pred CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 682 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.... ...+..+.+|+.+||+.||++|||+.|+++|
T Consensus 224 ~~~~----~~~s~~~~~li~~~L~~dp~~R~s~~eil~h 258 (321)
T d1tkia_ 224 EEAF----KEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHH----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhhc----cCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000 0123568899999999999999999999985
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-41 Score=355.11 Aligned_cols=246 Identities=24% Similarity=0.309 Sum_probs=195.9
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeC------CCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG 529 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 529 (736)
||..+.+++.++||+|+||+||+|++. +++.||||+++... +....|.+|+.++++++|||||+++|+|...
T Consensus 16 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~ 95 (308)
T d1p4oa_ 16 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 95 (308)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred eecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecC
Confidence 455678889999999999999999853 25789999997533 3345689999999999999999999999999
Q ss_pred CeEEEEEecCCCCCHhhhcccC----------CCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEc
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSS----------YFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIA 583 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~----------~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~ 583 (736)
+..++|||||++|+|.+++... ..+++..+..++.|+|+||.|||++ +.++||+
T Consensus 96 ~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~ 175 (308)
T d1p4oa_ 96 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 175 (308)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEEC
T ss_pred CceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEe
Confidence 9999999999999999988632 2578999999999999999999975 3479999
Q ss_pred ccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCC-CCCCccccCCccchhHHHHHHH
Q 041821 584 DFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI-RLSNWVVEDGEGQEAELKRFVR 662 (736)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~-~p~~~~~~~~~~~~~~~~~~~~ 662 (736)
|||+|+.+.............||+.|||||.+.+..++.++||||||+++|||++|+ +|+.... ......
T Consensus 176 DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~---------~~~~~~ 246 (308)
T d1p4oa_ 176 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS---------NEQVLR 246 (308)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC---------HHHHHH
T ss_pred ecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCC---------HHHHHH
Confidence 999998775544433344567999999999999999999999999999999999986 5554221 011111
Q ss_pred HHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 663 EVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
.+..+. ....+...+..+.+|+.+||+.||++||||.+|+++|++..+..
T Consensus 247 ----~i~~~~------------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~ 296 (308)
T d1p4oa_ 247 ----FVMEGG------------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 296 (308)
T ss_dssp ----HHHTTC------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred ----HHHhCC------------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 111111 11122334467999999999999999999999999999886643
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-40 Score=346.08 Aligned_cols=260 Identities=23% Similarity=0.282 Sum_probs=190.9
Q ss_pred hhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC----eEEEEEe
Q 041821 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR----HRLLIYE 537 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~e 537 (736)
.++.+.+.||+|+||.||+|++ +|+.||||+++...........|+..+.+++|||||+++++|.+.+ ..++|||
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~E 81 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEe
Confidence 4677888999999999999997 6889999999765443333445666667889999999999998654 6799999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC------------------------CCccEEcccCcccccCC
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD------------------------EFEPKIADFGLAKLSQR 593 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~------------------------~~~~kl~DFGla~~~~~ 593 (736)
||++|+|.++|++. .++|..+..++.|+|.||+|||+. ++.+||+|||+++....
T Consensus 82 y~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~ 160 (303)
T d1vjya_ 82 YHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160 (303)
T ss_dssp CCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred cccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccC
Confidence 99999999999765 599999999999999999999951 44889999999987765
Q ss_pred CCCcc--eeecccccCcccChhcccCCC------CccccceechhHHHHHHHhCCCCCCccccCCccchhH--HHHHHHH
Q 041821 594 GSNSS--QFSQIRGTKGYMAPEWASNLP------ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAE--LKRFVRE 663 (736)
Q Consensus 594 ~~~~~--~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~--~~~~~~~ 663 (736)
..... ......||+.|||||++.+.. ++.++|||||||+||||++|..|+............. .......
T Consensus 161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (303)
T d1vjya_ 161 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240 (303)
T ss_dssp TTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHH
T ss_pred CCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHH
Confidence 43322 234567999999999987642 6789999999999999999988875432221111000 0001111
Q ss_pred HHHHHhhhccccccccccCccCCCC-CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccccc
Q 041821 664 VKRKILYEEEAWIEEIVDPRLKGKF-NTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESEI 730 (736)
Q Consensus 664 ~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 730 (736)
..... ..+..+|.+.... +.+....+.+|+.+||+.||++|||+.||+++|+++.++...
T Consensus 241 ~~~~~-------~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~~~ 301 (303)
T d1vjya_ 241 MRKVV-------CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 301 (303)
T ss_dssp HHHHH-------TTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHH-------hccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhcCC
Confidence 11111 1122223222111 234556799999999999999999999999999998766543
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.6e-40 Score=347.54 Aligned_cols=228 Identities=26% Similarity=0.277 Sum_probs=189.6
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
..|++.+.||+|+||+||+|+. .+|+.||||++++. ....+.+.+|+.+|++++|||||++++++.+++..++||
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 4588999999999999999995 56899999999642 234577899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|||++|+|..++.....+++..+..++.||+.||+|||++ +..+||+|||+|+..... .
T Consensus 84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~-----~ 158 (316)
T d1fota_ 84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-----T 158 (316)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-----B
T ss_pred eecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccc-----c
Confidence 9999999999999888899999999999999999999976 347899999999876542 3
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
...+||+.|||||++.+..|+.++|||||||++|||++|+.||..... ... ...+..+.
T Consensus 159 ~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~---------~~~----~~~i~~~~-------- 217 (316)
T d1fota_ 159 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT---------MKT----YEKILNAE-------- 217 (316)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH---------HHH----HHHHHHCC--------
T ss_pred ccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCH---------HHH----HHHHHcCC--------
Confidence 456899999999999999999999999999999999999999974321 111 11111111
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
...+...+..+.+++.+||+.||.+|| |++++++|
T Consensus 218 -----~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 218 -----LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred -----CCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence 011223345788999999999999996 89999876
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-41 Score=350.16 Aligned_cols=243 Identities=26% Similarity=0.285 Sum_probs=190.8
Q ss_pred HHHHhhhhcccccCeeceeEEEEeeeCC--------CcEEEEEEeCccc--ccHHHHHHHHHHHhcC-CCCceeeEEEEE
Q 041821 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD--------GRAVAVKRLGDLH--QGEEVFWAEVSTIGKI-YHMNLVRMWGFC 526 (736)
Q Consensus 458 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 526 (736)
+|..+.|++.+.||+|+||.||+|+... +..||||+++... ....++.+|+..+.++ +|||||+++++|
T Consensus 9 ~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~ 88 (299)
T d1fgka_ 9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 88 (299)
T ss_dssp BCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccc
Confidence 3566789999999999999999998422 2479999996543 3446788999999888 799999999999
Q ss_pred EeCCeEEEEEecCCCCCHhhhcccCC----------------CCCHHHHHHHHHHHHHHhhhhhcCC-------------
Q 041821 527 SEGRHRLLIYEYVEKQSLDKHLFSSY----------------FLGWKERFKVALGTAKGLAYLHHDE------------- 577 (736)
Q Consensus 527 ~~~~~~~lv~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~i~~gL~yLH~~~------------- 577 (736)
.+++..++|||||++|+|.++|.... .+++.+++.++.||+.||+|||+.+
T Consensus 89 ~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl 168 (299)
T d1fgka_ 89 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 168 (299)
T ss_dssp CSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred ccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceee
Confidence 99999999999999999999996542 5899999999999999999999753
Q ss_pred ---CccEEcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHh-CCCCCCccccCCccc
Q 041821 578 ---FEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVK-GIRLSNWVVEDGEGQ 653 (736)
Q Consensus 578 ---~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~p~~~~~~~~~~~ 653 (736)
..+||+|||+++...............||+.|+|||.+.+..|+.++|||||||++|||++ |.+||.....
T Consensus 169 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~----- 243 (299)
T d1fgka_ 169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV----- 243 (299)
T ss_dssp CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH-----
Confidence 3789999999998766555444556779999999999999999999999999999999998 6777753211
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 041821 654 EAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECE 725 (736)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (736)
.... ..+..+ .....+...+..+.+|+.+||+.||++||||.||++.|+++.
T Consensus 244 ----~~~~----~~i~~~------------~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~ 295 (299)
T d1fgka_ 244 ----EELF----KLLKEG------------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295 (299)
T ss_dssp ----HHHH----HHHHTT------------CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----HHHH----HHHHcC------------CCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence 1111 111111 111223334567899999999999999999999999998874
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.1e-40 Score=341.94 Aligned_cols=234 Identities=21% Similarity=0.249 Sum_probs=188.3
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----------ccHHHHHHHHHHHhcCC-CCceeeEEEEEEeC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----------QGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEG 529 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----------~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~ 529 (736)
++|++.+.||+|+||+||+|+. .+++.||||++++.. ...+.+.+|+.+|++++ |||||++++++.++
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 82 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 82 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence 5688999999999999999995 568999999985432 11245889999999997 99999999999999
Q ss_pred CeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCC
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQR 593 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~ 593 (736)
+..+||||||++|+|.++|.....+++.+++.++.||++||+|||+. +..+||+|||+++.+..
T Consensus 83 ~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 162 (277)
T d1phka_ 83 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 162 (277)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred cceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccC
Confidence 99999999999999999998888899999999999999999999975 34789999999998765
Q ss_pred CCCcceeecccccCcccChhccc------CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHH
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWAS------NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRK 667 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (736)
... .....||+.|+|||++. ...++.++||||+||++|||++|+.||..... . .. ...
T Consensus 163 ~~~---~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~------~---~~----~~~ 226 (277)
T d1phka_ 163 GEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ------M---LM----LRM 226 (277)
T ss_dssp TCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------H---HH----HHH
T ss_pred CCc---eeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCH------H---HH----HHH
Confidence 432 34567999999999985 34578899999999999999999999974321 0 11 111
Q ss_pred HhhhccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 668 ILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 668 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
+..+. . ..........++.+.+|+.+||+.||++|||+.||++|
T Consensus 227 i~~~~---~------~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 227 IMSGN---Y------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp HHHTC---C------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHhCC---C------CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 11111 0 01111122345678999999999999999999999876
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-40 Score=347.87 Aligned_cols=230 Identities=22% Similarity=0.269 Sum_probs=186.6
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc----cccHHHHHHHHHHHh-cCCCCceeeEEEEEEeCCeEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL----HQGEEVFWAEVSTIG-KIYHMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~lv 535 (736)
++|++.+.||+|+||+||+|+. .+++.||||++++. ....+.+..|..++. .++|||||++++++.+++..+||
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 4688999999999999999995 46899999999653 234456777777765 68999999999999999999999
Q ss_pred EecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcce
Q 041821 536 YEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQ 599 (736)
Q Consensus 536 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~ 599 (736)
||||++|+|.+++.....+++.++..++.||+.||+|||+++ ..+||+|||+|+....... .
T Consensus 82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~--~ 159 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA--K 159 (320)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC--C
T ss_pred EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccccc--c
Confidence 999999999999988888999999999999999999999763 3789999999986654332 2
Q ss_pred eecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
.....||+.|||||++.+..++.++|||||||++|||++|+.||..... ..+. ..+..+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~---------~~~~----~~i~~~~------- 219 (320)
T d1xjda_ 160 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE---------EELF----HSIRMDN------- 219 (320)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHH----HHHHHCC-------
T ss_pred ccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCH---------HHHH----HHHHcCC-------
Confidence 4456799999999999999999999999999999999999999974321 1111 1111111
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 041821 680 VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMD-SVVQ 719 (736)
Q Consensus 680 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 719 (736)
+ ..+...+..+.+|+.+||+.||++|||+. +|++
T Consensus 220 --~----~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~ 254 (320)
T d1xjda_ 220 --P----FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 254 (320)
T ss_dssp --C----CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred --C----CCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence 1 11223346788999999999999999995 7765
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.6e-40 Score=340.58 Aligned_cols=242 Identities=22% Similarity=0.260 Sum_probs=183.3
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC----eE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR----HR 532 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~ 532 (736)
++|++.+.||+|+||+||+|+. .+++.||||+++... ...+.+.+|+++|++++|||||++++++...+ ..
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~ 86 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 86 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence 5688999999999999999994 569999999996532 23456899999999999999999999997644 47
Q ss_pred EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~ 596 (736)
+||||||++++|.+++...+.+++.+++.++.||++||+|||+.+ ..++|+|||.++.......
T Consensus 87 ~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~ 166 (277)
T d1o6ya_ 87 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 166 (277)
T ss_dssp EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----
T ss_pred EEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhccccc
Confidence 899999999999999988888999999999999999999999763 3679999999876644332
Q ss_pred c-ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc
Q 041821 597 S-SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW 675 (736)
Q Consensus 597 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (736)
. ......+||+.|||||++.+..++.++|||||||++|||++|+.||..... . .... .......
T Consensus 167 ~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~----~~~~---~~~~~~~--- 231 (277)
T d1o6ya_ 167 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-----V----SVAY---QHVREDP--- 231 (277)
T ss_dssp ------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----H----HHHH---HHHHCCC---
T ss_pred cccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCH-----H----HHHH---HHHhcCC---
Confidence 2 234456899999999999999999999999999999999999999964321 0 0111 1111100
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhccc
Q 041821 676 IEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-TMDSVVQSLLECE 725 (736)
Q Consensus 676 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~ 725 (736)
..+. ......+..+.+++.+||+.||++|| |++++++.|.++.
T Consensus 232 ----~~~~---~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 232 ----IPPS---ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp ----CCGG---GTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ----CCCc---hhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 0000 01112345788999999999999999 8999999988764
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1e-39 Score=346.20 Aligned_cols=228 Identities=21% Similarity=0.161 Sum_probs=188.9
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcc----cccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDL----HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIY 536 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 536 (736)
+.|++.+.||+|+||.||+|+. .+|+.||||++.+. ....+.+.+|+++|+.++|||||++++++.+....++||
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~ 120 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence 4788999999999999999995 46999999999642 234567899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCccee
Q 041821 537 EYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 537 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~~~ 600 (736)
||+.+|+|..++.....+++.++..++.||+.||.|||+. +..+||+|||+|+.+... .
T Consensus 121 e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~-----~ 195 (350)
T d1rdqe_ 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----T 195 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-----B
T ss_pred ccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccc-----c
Confidence 9999999999998888899999999999999999999965 337899999999977542 3
Q ss_pred ecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIV 680 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (736)
....||+.|||||++.+..++.++|||||||++|||++|+.||..... ..... .+..+.
T Consensus 196 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~---------~~~~~----~i~~~~-------- 254 (350)
T d1rdqe_ 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---------IQIYE----KIVSGK-------- 254 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHH----HHHHCC--------
T ss_pred ccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCH---------HHHHH----HHhcCC--------
Confidence 356799999999999999999999999999999999999999964311 11111 111111
Q ss_pred cCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 681 DPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 681 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
...+...+..+.+++.+||+.||.+|+ |+++|++|
T Consensus 255 -----~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H 294 (350)
T d1rdqe_ 255 -----VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp -----CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred -----CCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcC
Confidence 011223345788999999999999994 89999874
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-39 Score=343.36 Aligned_cols=232 Identities=17% Similarity=0.132 Sum_probs=181.7
Q ss_pred hhhhccc-ccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhc-CCCCceeeEEEEEEe----CCeEEE
Q 041821 462 STKSFKE-ELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGK-IYHMNLVRMWGFCSE----GRHRLL 534 (736)
Q Consensus 462 ~~~~~~~-~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~~~~l 534 (736)
..|.+.+ .||+|+||+||+|+. .+++.||||+++.. +.+.+|+.++.+ .+|||||++++++.+ ....+|
T Consensus 11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~i 86 (335)
T d2ozaa1 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 86 (335)
T ss_dssp GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEE
Confidence 4677765 599999999999994 56899999998543 346789988665 589999999999876 467899
Q ss_pred EEecCCCCCHhhhcccC--CCCCHHHHHHHHHHHHHHhhhhhcCC-------------------CccEEcccCcccccCC
Q 041821 535 IYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDE-------------------FEPKIADFGLAKLSQR 593 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~gL~yLH~~~-------------------~~~kl~DFGla~~~~~ 593 (736)
|||||++|+|.++|... ..+++.++..|+.||+.||+|||+.+ ..+||+|||+|+....
T Consensus 87 vmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~ 166 (335)
T d2ozaa1 87 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 166 (335)
T ss_dssp EEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCC
T ss_pred EEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccC
Confidence 99999999999999764 36999999999999999999999652 2589999999987765
Q ss_pred CCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
... .....||+.|||||++.+..|+.++|||||||++|||++|+.||........ ....
T Consensus 167 ~~~---~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~---------~~~~--------- 225 (335)
T d2ozaa1 167 HNS---LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI---------SPGM--------- 225 (335)
T ss_dssp CCC---CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC------------------------
T ss_pred CCc---cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH---------HHHH---------
Confidence 433 3456799999999999999999999999999999999999999974322111 0000
Q ss_pred ccccccccCccCCC--CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 674 AWIEEIVDPRLKGK--FNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+........ .....++.+.+|+.+||+.||++|||+.|+++|
T Consensus 226 --~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 226 --KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp ----CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --HHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 011111111111 112345689999999999999999999999986
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.9e-39 Score=345.99 Aligned_cols=232 Identities=22% Similarity=0.229 Sum_probs=183.9
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc----ccHHHHHH---HHHHHhcCCCCceeeEEEEEEeCCeEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH----QGEEVFWA---EVSTIGKIYHMNLVRMWGFCSEGRHRL 533 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~---E~~~l~~l~h~niv~l~~~~~~~~~~~ 533 (736)
..|++.+.||+|+||.||+|+. .+|+.||||++.+.. .....+.+ |+.+++.++|||||++++++.+.+..+
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ 83 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 83 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence 4588899999999999999995 468999999986422 22333444 477788889999999999999999999
Q ss_pred EEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCc
Q 041821 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 534 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~ 597 (736)
||||||++|+|.++|.....+++..+..++.||+.||.|||++ +..+||+|||+|+.+....
T Consensus 84 ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~-- 161 (364)
T d1omwa3 84 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 161 (364)
T ss_dssp EEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSC--
T ss_pred EEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCc--
Confidence 9999999999999998888899999999999999999999975 3478999999998775432
Q ss_pred ceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccccc
Q 041821 598 SQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWI 676 (736)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (736)
.....||+.|||||++.. ..|+.++|||||||++|||++|+.||........ . ...+..
T Consensus 162 --~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~------~----~~~~~~-------- 221 (364)
T d1omwa3 162 --PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK------H----EIDRMT-------- 221 (364)
T ss_dssp --CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCH------H----HHHHHS--------
T ss_pred --ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHH------H----HHHHhc--------
Confidence 345679999999999874 5689999999999999999999999975432111 0 011110
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 041821 677 EEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPT-----MDSVVQS 720 (736)
Q Consensus 677 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 720 (736)
... ....+...+..+.+|+.+||+.||++||| ++|+++|
T Consensus 222 ---~~~--~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H 265 (364)
T d1omwa3 222 ---LTM--AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 265 (364)
T ss_dssp ---SSC--CCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred ---ccC--CCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence 000 01112233457899999999999999999 7888865
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-39 Score=336.12 Aligned_cols=243 Identities=20% Similarity=0.197 Sum_probs=180.8
Q ss_pred ccccCeeceeEEEEeee-CCCcEEEEEEeCccccc------HHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEecC
Q 041821 467 KEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQG------EEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 467 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
.++||+|+||+||+|+. .+|+.||||+++..... .+.+.+|+.+|++++|||||++++++.+++..+|||||+
T Consensus 3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~ 82 (299)
T d1ua2a_ 3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 82 (299)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence 46899999999999995 45899999999653221 245889999999999999999999999999999999999
Q ss_pred CCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeecc
Q 041821 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQI 603 (736)
Q Consensus 540 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~~ 603 (736)
.++++..++.....+++.++..++.||+.||+|||+++ ..+||+|||+|+........ ....
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~--~~~~ 160 (299)
T d1ua2a_ 83 ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA--YTHQ 160 (299)
T ss_dssp SEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC--CCCS
T ss_pred cchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCccc--ccce
Confidence 99888888777778999999999999999999999763 37899999999876554322 3456
Q ss_pred cccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc---
Q 041821 604 RGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI--- 679 (736)
Q Consensus 604 ~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 679 (736)
+||+.|||||++... .|+.++|||||||++|||++|..||....+ ...+.. +.+.............
T Consensus 161 ~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~-----~~~l~~----i~~~~~~~~~~~~~~~~~~ 231 (299)
T d1ua2a_ 161 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-----LDQLTR----IFETLGTPTEEQWPDMCSL 231 (299)
T ss_dssp CCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH----HHHHHCCCCTTTSSSTTSS
T ss_pred ecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCH-----HHHHHH----HHHhcCCCChhhccchhcc
Confidence 799999999998754 589999999999999999999999864321 111111 1111110000000000
Q ss_pred ---ccCccCCCCCH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 680 ---VDPRLKGKFNT-----NQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 680 ---~d~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.........+. ...+.+.+|+.+||+.||++|||++|+++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 232 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred chhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence 00000001111 224578999999999999999999999986
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-39 Score=332.04 Aligned_cols=227 Identities=22% Similarity=0.276 Sum_probs=183.1
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc-------ccHHHHHHHHHHHhcCC--CCceeeEEEEEEeCCe
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH-------QGEEVFWAEVSTIGKIY--HMNLVRMWGFCSEGRH 531 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~ 531 (736)
.+|++.+.||+|+||+||+|+. .+++.||||++++.. ....++.+|+.+|++++ |||||++++++.+++.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 4688999999999999999995 568999999986422 11234678999999986 8999999999999999
Q ss_pred EEEEEecCCC-CCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC-----------------CCccEEcccCcccccCC
Q 041821 532 RLLIYEYVEK-QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD-----------------EFEPKIADFGLAKLSQR 593 (736)
Q Consensus 532 ~~lv~e~~~~-gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~-----------------~~~~kl~DFGla~~~~~ 593 (736)
.++||||+.+ +++.+++.....+++.++..++.||++||+|||+. +..+||+|||+|+....
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~ 163 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 163 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCS
T ss_pred EEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceeccc
Confidence 9999999976 68888888777899999999999999999999965 23689999999987644
Q ss_pred CCCcceeecccccCcccChhcccCCCC-ccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhc
Q 041821 594 GSNSSQFSQIRGTKGYMAPEWASNLPI-TAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (736)
.. .....||+.|||||++.+..+ +.++|||||||++|||++|+.||.... .+ ..+
T Consensus 164 ~~----~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~---------------~i----~~~- 219 (273)
T d1xwsa_ 164 TV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------EI----IRG- 219 (273)
T ss_dssp SC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---------------HH----HHC-
T ss_pred cc----ccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch---------------HH----hhc-
Confidence 32 345679999999999987665 678999999999999999999996321 00 000
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hhcc
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS--LLEC 724 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~ 724 (736)
.. .+.. ..+..+.+|+.+||+.||++|||++|+++| ++++
T Consensus 220 ----~~----~~~~----~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~ 261 (273)
T d1xwsa_ 220 ----QV----FFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261 (273)
T ss_dssp ----CC----CCSS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred ----cc----CCCC----CCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence 00 1111 223578899999999999999999999986 5554
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-38 Score=324.84 Aligned_cols=253 Identities=21% Similarity=0.215 Sum_probs=184.7
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
+.|++.++||+|+||+||+|+. .+++.||||+++... ...+.+.+|+++|++++|||||++++++.+++..++|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 4678899999999999999995 568999999996533 234678999999999999999999999999999999999
Q ss_pred cCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCCCccee
Q 041821 538 YVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 538 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~~~~~~ 600 (736)
|+.++.+...... ...+++..+..++.||+.||+|||++++ .+||+|||+|+....... ..
T Consensus 82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~--~~ 159 (298)
T d1gz8a_ 82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TY 159 (298)
T ss_dssp CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSB--CT
T ss_pred ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCcc--cc
Confidence 9975544433333 3479999999999999999999997643 679999999987754332 23
Q ss_pred ecccccCcccChhcccCCC-CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccccccc
Q 041821 601 SQIRGTKGYMAPEWASNLP-ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEI 679 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (736)
....||+.|+|||.+.... ++.++|||||||++|||++|+.||..... ...+.... ..............
T Consensus 160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~-----~~~~~~i~----~~~~~~~~~~~~~~ 230 (298)
T d1gz8a_ 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-----IDQLFRIF----RTLGTPDEVVWPGV 230 (298)
T ss_dssp TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHH----HHHCCCCTTTSTTG
T ss_pred eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCH-----HHHHHHHH----HhcCCCchhhcccc
Confidence 4467999999999987766 57899999999999999999999974321 11111111 11111000000000
Q ss_pred c-cCccC------CCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hhccc
Q 041821 680 V-DPRLK------GKFN-----TNQAATLIGIGISCVDEDRSKRPTMDSVVQS--LLECE 725 (736)
Q Consensus 680 ~-d~~~~------~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 725 (736)
. .+... ...+ ...+..+.+|+.+||+.||++|||++|+++| ++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~ 290 (298)
T d1gz8a_ 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290 (298)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred ccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCC
Confidence 0 00000 0001 1223578899999999999999999999997 65553
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=9.8e-38 Score=322.97 Aligned_cols=248 Identities=23% Similarity=0.279 Sum_probs=185.7
Q ss_pred hhhhcccccCeeceeEEEEeeeCCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEec
Q 041821 462 STKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY 538 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 538 (736)
++|++.++||+|+||+||+|+.++++.||||+++... ...+.+.+|+.+|++++|||||++++++.+++..+++|||
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 3678899999999999999998889999999996532 2346789999999999999999999999999999999999
Q ss_pred CCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceeec
Q 041821 539 VEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFSQ 602 (736)
Q Consensus 539 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~~ 602 (736)
+.++.+..+......+++..+..++.||+.||+|||+.+ ..+||+|||++......... ...
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~ 159 (286)
T d1ob3a_ 82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK--YTH 159 (286)
T ss_dssp CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred ehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCccc--cce
Confidence 998888888777778999999999999999999999763 37899999999876543322 344
Q ss_pred ccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhc-ccc--ccc
Q 041821 603 IRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE-EAW--IEE 678 (736)
Q Consensus 603 ~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~ 678 (736)
..|++.|+|||.+.+. .++.++|||||||++|||++|+.||..... .....+.. ....... ..+ ...
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~-----~~~~~~i~----~~~~~~~~~~~~~~~~ 230 (286)
T d1ob3a_ 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE-----ADQLMRIF----RILGTPNSKNWPNVTE 230 (286)
T ss_dssp --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHH----HHHCCCCTTTSTTGGG
T ss_pred ecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCH-----HHHHHHHH----HhhCCCChhhccchhh
Confidence 5689999999998754 579999999999999999999999974321 11111111 1110000 000 000
Q ss_pred c---------ccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 679 I---------VDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 679 ~---------~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
. ..+.............+.+|+.+||+.||++|||++|+++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H 281 (286)
T d1ob3a_ 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (286)
T ss_dssp STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 00000011122234578899999999999999999999865
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-37 Score=323.13 Aligned_cols=254 Identities=23% Similarity=0.284 Sum_probs=182.0
Q ss_pred hhhhcccccCeeceeEEEEeee-CC-CcEEEEEEeCccc---ccHHHHHHHHHHHhcC---CCCceeeEEEEEEe-----
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-AD-GRAVAVKRLGDLH---QGEEVFWAEVSTIGKI---YHMNLVRMWGFCSE----- 528 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~----- 528 (736)
.+|++.++||+|+||+||+|+. .+ ++.||||+++... .....+.+|+.+|+.+ +||||+++++++..
T Consensus 7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~ 86 (305)
T d1blxa_ 7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 86 (305)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence 5788999999999999999995 34 6679999985422 1223456777776665 79999999999864
Q ss_pred CCeEEEEEecCCCCCHhhhccc-CCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCccccc
Q 041821 529 GRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLS 591 (736)
Q Consensus 529 ~~~~~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~ 591 (736)
....+++|||+.++.+...... ...+++..++.++.|++.||+|||+++ ..+||+|||+++..
T Consensus 87 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~ 166 (305)
T d1blxa_ 87 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY 166 (305)
T ss_dssp EEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCC
T ss_pred CceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhh
Confidence 3467999999998877654433 347899999999999999999999763 37899999999865
Q ss_pred CCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhh
Q 041821 592 QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671 (736)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (736)
.... ......||+.|||||++.+.+|+.++||||+||++|||++|+.||..... ...+..+..... ...
T Consensus 167 ~~~~---~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~-----~~~~~~i~~~~~---~~~ 235 (305)
T d1blxa_ 167 SFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-----VDQLGKILDVIG---LPG 235 (305)
T ss_dssp CGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHC---CCC
T ss_pred cccc---cCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCH-----HHHHHHHHHhhC---CCc
Confidence 4332 24567899999999999999999999999999999999999999974321 111111111100 000
Q ss_pred ccccccc------cc---cCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hhcccc
Q 041821 672 EEAWIEE------IV---DPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS--LLECET 726 (736)
Q Consensus 672 ~~~~~~~------~~---d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~~ 726 (736)
...+... .. .............+.+.+|+.+||+.||++|||+.|+++| ++++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~ 301 (305)
T d1blxa_ 236 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 301 (305)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred hhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchh
Confidence 0000000 00 0000011122334578899999999999999999999987 655543
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-36 Score=316.88 Aligned_cols=250 Identities=18% Similarity=0.168 Sum_probs=180.5
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEe--------C
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE--------G 529 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~ 529 (736)
.+|++.++||+|+||+||+|+. .+|+.||||++.... ...+.+.+|+.+|++++||||+++++++.. .
T Consensus 10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~ 89 (318)
T d3blha1 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 89 (318)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence 6788999999999999999995 569999999985432 334678899999999999999999999865 3
Q ss_pred CeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCC
Q 041821 530 RHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQR 593 (736)
Q Consensus 530 ~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~ 593 (736)
...++||||+.++.+.........++...++.++.||++||.|||+. +..+||+|||+++.+..
T Consensus 90 ~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~ 169 (318)
T d3blha1 90 GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 169 (318)
T ss_dssp -CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC
T ss_pred ceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeeccc
Confidence 46799999999888877776667899999999999999999999975 33789999999987654
Q ss_pred CCCcc--eeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhh
Q 041821 594 GSNSS--QFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILY 670 (736)
Q Consensus 594 ~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (736)
..... .....+||+.|+|||++.+. .++.++|||||||++|||++|+.||..... .... ....+....
T Consensus 170 ~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~------~~~~---~~i~~~~~~ 240 (318)
T d3blha1 170 AKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE------QHQL---ALISQLCGS 240 (318)
T ss_dssp -----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHH---HHHHHHHCC
T ss_pred ccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCH------HHHH---HHHHHhcCC
Confidence 33221 23345799999999998765 689999999999999999999999964321 1111 111111110
Q ss_pred hccccccccc--------cCccCCCCCHH-------HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 671 EEEAWIEEIV--------DPRLKGKFNTN-------QAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 671 ~~~~~~~~~~--------d~~~~~~~~~~-------~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
.......... ........... ....+++|+.+||+.||++|||++|+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 241 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp CCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence 0000000000 00000011111 13467889999999999999999999987
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.7e-36 Score=313.16 Aligned_cols=247 Identities=18% Similarity=0.170 Sum_probs=182.5
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCce-eeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNL-VRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~ 539 (736)
.+|++.+.||+|+||.||+|+. .+++.||||++.... ..+++..|++++++++|+|+ +.+.++..+++..++||||+
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~ 85 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 85 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence 3588999999999999999995 568999999886532 22347789999999987665 45566667888999999999
Q ss_pred CCCCHhhhcc-cCCCCCHHHHHHHHHHHHHHhhhhhcCCC-------------------ccEEcccCcccccCCCCCcc-
Q 041821 540 EKQSLDKHLF-SSYFLGWKERFKVALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSS- 598 (736)
Q Consensus 540 ~~gsL~~~l~-~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-------------------~~kl~DFGla~~~~~~~~~~- 598 (736)
. ++|...+. ....+++..+..++.|++.||+|||++++ .+||+|||+|+.+.......
T Consensus 86 ~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~ 164 (299)
T d1ckia_ 86 G-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 164 (299)
T ss_dssp C-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCB
T ss_pred C-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccc
Confidence 5 56655554 45589999999999999999999997532 58999999999876543221
Q ss_pred ----eeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhccc
Q 041821 599 ----QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEA 674 (736)
Q Consensus 599 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (736)
......||+.|||||++.+..++.++|||||||++|||++|+.||........ ...............
T Consensus 165 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~-----~~~~~~~~~~~~~~~--- 236 (299)
T d1ckia_ 165 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-----RQKYERISEKKMSTP--- 236 (299)
T ss_dssp CCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC------------HHHHHHHHHHSC---
T ss_pred eeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHH-----HHHHHHhhcccCCCC---
Confidence 23456799999999999999999999999999999999999999975432211 011111111100000
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccccc
Q 041821 675 WIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETES 728 (736)
Q Consensus 675 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (736)
. +.+.. ..+..+.+++.+||+.||++||+++++.+.|+.+....
T Consensus 237 -~-----~~~~~----~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~ 280 (299)
T d1ckia_ 237 -I-----EVLCK----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 280 (299)
T ss_dssp -H-----HHHTT----TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred -h-----hHhcc----CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHc
Confidence 0 00111 12356888999999999999999999998888765433
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-36 Score=321.11 Aligned_cols=251 Identities=22% Similarity=0.195 Sum_probs=179.3
Q ss_pred hhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCCCceeeEEEEEEeC------CeEEEE
Q 041821 463 TKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG------RHRLLI 535 (736)
Q Consensus 463 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~lv 535 (736)
+|+..++||+|+||+||+|+. .+++.||||++...... ..+|+++|++++|||||++++++... .+.+||
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~---~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 97 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF---KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 97 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS---CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH---HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEE
Confidence 577788999999999999995 45899999999654322 24799999999999999999998643 357899
Q ss_pred EecCCCCCHhhh---cccCCCCCHHHHHHHHHHHHHHhhhhhcCC-----------------CccEEcccCcccccCCCC
Q 041821 536 YEYVEKQSLDKH---LFSSYFLGWKERFKVALGTAKGLAYLHHDE-----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 536 ~e~~~~gsL~~~---l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~-----------------~~~kl~DFGla~~~~~~~ 595 (736)
||||+++.+..+ ......+++.+++.++.||++||+|||+++ ..+||+|||+++.+....
T Consensus 98 ~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~ 177 (350)
T d1q5ka_ 98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177 (350)
T ss_dssp EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTS
T ss_pred EeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCCc
Confidence 999986643333 234557999999999999999999999752 268999999998775543
Q ss_pred CcceeecccccCcccChhcccC-CCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHH-------HHHH
Q 041821 596 NSSQFSQIRGTKGYMAPEWASN-LPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVRE-------VKRK 667 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~ 667 (736)
. .....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||..... ...+...... ....
T Consensus 178 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~-----~~~l~~i~~~~g~~~~~~~~~ 249 (350)
T d1q5ka_ 178 P---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-----VDQLVEIIKVLGTPTREQIRE 249 (350)
T ss_dssp C---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSH-----HHHHHHHHHHHCCCCHHHHHH
T ss_pred c---cccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCH-----HHHHHHHHHHhCCChHHhhhh
Confidence 3 344679999999998875 4689999999999999999999999974321 1111111110 0000
Q ss_pred Hhhh-ccccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hhcc
Q 041821 668 ILYE-EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS--LLEC 724 (736)
Q Consensus 668 ~~~~-~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~ 724 (736)
.... ........................+.+|+.+||+.||++|||+.|+++| ++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 309 (350)
T d1q5ka_ 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309 (350)
T ss_dssp HCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred hccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence 0000 0000111111111111122334578899999999999999999999986 5554
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.1e-35 Score=313.92 Aligned_cols=250 Identities=15% Similarity=0.210 Sum_probs=183.3
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCC-CCceeeEEEEEEeC--CeEEEEEe
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEG--RHRLLIYE 537 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e 537 (736)
++|++.++||+|+||+||+|+. .+++.||||+++.. ..+++.+|+.+|++++ ||||+++++++... ...++|||
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e 112 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 112 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH--HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEe
Confidence 5789999999999999999995 56899999999653 3466889999999995 99999999999853 56899999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC-----------------ccEEcccCcccccCCCCCccee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-----------------EPKIADFGLAKLSQRGSNSSQF 600 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~-----------------~~kl~DFGla~~~~~~~~~~~~ 600 (736)
||++++|..+. ..+++.+++.++.||+.||+|||++++ .+||+|||+|+....... .
T Consensus 113 ~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~---~ 186 (328)
T d3bqca1 113 HVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE---Y 186 (328)
T ss_dssp CCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCC---C
T ss_pred ecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCc---c
Confidence 99999998764 358999999999999999999997532 579999999987765433 3
Q ss_pred ecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHH-----HHHHHHHHhhhccc
Q 041821 601 SQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRF-----VREVKRKILYEEEA 674 (736)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 674 (736)
....||+.|+|||.+.+. .++.++||||+||++|||++|+.||.......... ..+... ..............
T Consensus 187 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~~~~~~~ 265 (328)
T d3bqca1 187 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL-VRIAKVLGTEDLYDYIDKYNIELDP 265 (328)
T ss_dssp CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHH-HHHHHHHCHHHHHHHHHHTTCCCCG
T ss_pred cccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHH-HHHHHHHCCchhhhhhhhcccccCc
Confidence 456799999999998765 47999999999999999999999997443211100 000000 00001100000000
Q ss_pred cccccccCc--------cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 675 WIEEIVDPR--------LKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 675 ~~~~~~d~~--------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
......... ............+.+|+.+||+.||++|||++|+++|
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H 319 (328)
T d3bqca1 266 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319 (328)
T ss_dssp GGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 011111100 0111112234578899999999999999999999975
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-35 Score=308.21 Aligned_cols=249 Identities=18% Similarity=0.171 Sum_probs=189.2
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCCeEEEEEe
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYE 537 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 537 (736)
++|++.++||+|+||+||+|+. .+++.||||+++... ...+.+.+|+.+|+.++||||+++++++.+....++|+|
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 3578899999999999999995 568999999985432 335678999999999999999999999999999999999
Q ss_pred cCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCCcceee
Q 041821 538 YVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSNSSQFS 601 (736)
Q Consensus 538 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~~~~~~ 601 (736)
++.+++|..++.....+++..+..++.|++.||+|||+++ ..+||+|||.|+........ ..
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~--~~ 159 (292)
T d1unla_ 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC--YS 159 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSC--CC
T ss_pred eccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCcc--ce
Confidence 9999999998888888999999999999999999999763 36899999999877654332 33
Q ss_pred cccccCcccChhcccCCC-CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcccc---cc
Q 041821 602 QIRGTKGYMAPEWASNLP-ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAW---IE 677 (736)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 677 (736)
...+++.|+|||.+.... ++.++|||||||++|||++|+.||...... .... ..+........... ..
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~ 231 (292)
T d1unla_ 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV----DDQL----KRIFRLLGTPTEEQWPSMT 231 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH----HHHH----HHHHHHHCCCCTTTCTTGG
T ss_pred eeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCH----HHHH----HHHHhhcCCCChhhhhhhh
Confidence 456788999999988665 699999999999999999999997532211 1111 11111111100000 00
Q ss_pred cccc---------CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 678 EIVD---------PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 678 ~~~d---------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
...+ ..............+.+|+.+||+.||++|||++||++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000 000111223344678899999999999999999999876
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-36 Score=314.19 Aligned_cols=236 Identities=21% Similarity=0.187 Sum_probs=186.6
Q ss_pred hhhhcccccCeeceeEEEEeee----CCCcEEEEEEeCccc-----ccHHHHHHHHHHHhcCCC-CceeeEEEEEEeCCe
Q 041821 462 STKSFKEELGRGGSGAVYKGVL----ADGRAVAVKRLGDLH-----QGEEVFWAEVSTIGKIYH-MNLVRMWGFCSEGRH 531 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~ 531 (736)
++|++.++||+|+||+||+|+. .+|+.||||++++.. ...+.+.+|+++|++++| |||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 5699999999999999999984 247899999996532 234567899999999976 899999999999999
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~ 595 (736)
.+++|||+.+|+|.+++.....+++..+..++.||+.||.|||+.+ ..+||+|||+++.+....
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~ 183 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE 183 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGG
T ss_pred eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcccc
Confidence 9999999999999999988888899999999999999999999753 378999999998765433
Q ss_pred CcceeecccccCcccChhcccCC--CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhcc
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNL--PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEE 673 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (736)
.. ......|++.|+|||.+... .++.++|||||||+||||++|+.||........ ...+.... ...
T Consensus 184 ~~-~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~-----~~~i~~~~----~~~-- 251 (322)
T d1vzoa_ 184 TE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-----QAEISRRI----LKS-- 251 (322)
T ss_dssp GG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-----HHHHHHHH----HHC--
T ss_pred cc-cccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHHhc----ccC--
Confidence 22 24456799999999999754 478899999999999999999999975533221 11111111 000
Q ss_pred ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 041821 674 AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRP-----TMDSVVQS 720 (736)
Q Consensus 674 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 720 (736)
....+...+..+.+|+.+||+.||++|| |++|+++|
T Consensus 252 -----------~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H 292 (322)
T d1vzoa_ 252 -----------EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 292 (322)
T ss_dssp -----------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred -----------CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence 0112334457889999999999999999 48899875
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.5e-36 Score=316.98 Aligned_cols=250 Identities=22% Similarity=0.272 Sum_probs=177.5
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC------e
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR------H 531 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 531 (736)
.+|++.++||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||+++++|...+ +
T Consensus 18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~ 97 (346)
T d1cm8a_ 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 97 (346)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccce
Confidence 5688899999999999999995 469999999997533 23457889999999999999999999998755 5
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~ 595 (736)
.+|||||+ +.+|..+++. ..+++..++.++.||+.||.|||++ +..+||+|||+|+.....
T Consensus 98 ~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~- 174 (346)
T d1cm8a_ 98 FYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE- 174 (346)
T ss_dssp CEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS-
T ss_pred EEEEEecc-cccHHHHHHh-ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCCc-
Confidence 69999999 5677777654 4699999999999999999999975 347899999999876543
Q ss_pred CcceeecccccCcccChhcccCC-CCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHH-------HHHH
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNL-PITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVRE-------VKRK 667 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~ 667 (736)
.+...||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..+...... ....
T Consensus 175 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 245 (346)
T d1cm8a_ 175 ----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-----DQLKEIMKVTGTPPAEFVQR 245 (346)
T ss_dssp ----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHHHHCCCCHHHHHT
T ss_pred ----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChH-----HHHHHHHhccCCCcHHHHhh
Confidence 3456799999999998764 5789999999999999999999999743211 111111000 0000
Q ss_pred Hhhhcc----ccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hhcc
Q 041821 668 ILYEEE----AWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS--LLEC 724 (736)
Q Consensus 668 ~~~~~~----~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~ 724 (736)
...... ....+.....+. .........+.+|+.+||+.||++|||+.|+++| ++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~ 307 (346)
T d1cm8a_ 246 LQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 307 (346)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred hcchhhhhhhccCCcccccchH-HhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence 000000 000000001000 1112234567899999999999999999999987 6554
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=2.7e-35 Score=305.05 Aligned_cols=248 Identities=15% Similarity=0.156 Sum_probs=189.7
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCCC-CceeeEEEEEEeCCeEEEEEecC
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH-MNLVRMWGFCSEGRHRLLIYEYV 539 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~~ 539 (736)
..|.+.++||+|+||+||+|+. .+++.||||++.... ..+.+.+|+++++.++| +|++.+++++..+...++||||+
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~ 83 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 83 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence 4688999999999999999994 468999999885432 22346789999999975 89999999999999999999999
Q ss_pred CCCCHhhhcccCC-CCCHHHHHHHHHHHHHHhhhhhcCCC---------------------ccEEcccCcccccCCCCCc
Q 041821 540 EKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLHHDEF---------------------EPKIADFGLAKLSQRGSNS 597 (736)
Q Consensus 540 ~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~gL~yLH~~~~---------------------~~kl~DFGla~~~~~~~~~ 597 (736)
+++|.+++.... .+++.++..++.|++.||+|||+.++ .+||+|||+|+........
T Consensus 84 -~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~ 162 (293)
T d1csna_ 84 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTK 162 (293)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTC
T ss_pred -CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccc
Confidence 689999887654 79999999999999999999997532 5799999999876543221
Q ss_pred -----ceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHHHHhhhc
Q 041821 598 -----SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEE 672 (736)
Q Consensus 598 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (736)
......+||+.|||||++.+..++.++|||||||++|||++|+.||........ .. ....+........
T Consensus 163 ~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~-----~~-~~~~i~~~~~~~~ 236 (293)
T d1csna_ 163 QHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-----KQ-KYERIGEKKQSTP 236 (293)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-----HH-HHHHHHHHHHHSC
T ss_pred cceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhH-----HH-HHHHHHhccCCCC
Confidence 123456799999999999999999999999999999999999999974432211 11 1111111000000
Q ss_pred cccccccccCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccccc
Q 041821 673 EAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSLLECETESE 729 (736)
Q Consensus 673 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (736)
..+ +.... ++.+.+++..|++.+|++||+++.+.+.|+++.+...
T Consensus 237 ---~~~-----l~~~~----p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~~ 281 (293)
T d1csna_ 237 ---LRE-----LCAGF----PEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 281 (293)
T ss_dssp ---HHH-----HTTTS----CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ---hHH-----hcCCC----CHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHcC
Confidence 111 11112 3468889999999999999999999998888765443
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-35 Score=314.68 Aligned_cols=257 Identities=17% Similarity=0.191 Sum_probs=179.3
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc--ccHHHHHHHHHHHhcCCCCceeeEEEEEEeCC----eEEE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGR----HRLL 534 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~l 534 (736)
.+|++.++||+|+||+||+|+. .+++.||||+++... ...+.+.+|+.+|++++||||+++++++.... ..++
T Consensus 8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~ 87 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 87 (345)
T ss_dssp TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence 3588899999999999999984 579999999997543 33467889999999999999999999997653 2345
Q ss_pred EEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcC----------------CCccEEcccCcccccCCCCCcc
Q 041821 535 IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSS 598 (736)
Q Consensus 535 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~----------------~~~~kl~DFGla~~~~~~~~~~ 598 (736)
++||+.+|+|.+++... .+++..++.++.||+.||+|||++ +..+||+|||+|+.........
T Consensus 88 l~~~~~~g~L~~~l~~~-~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~ 166 (345)
T d1pmea_ 88 LVTHLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 166 (345)
T ss_dssp EEEECCCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBC
T ss_pred EEEeecCCchhhhhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccc
Confidence 55667799999999754 599999999999999999999965 3378999999998765432221
Q ss_pred -eeecccccCcccChhccc-CCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHH---HHhhhc-
Q 041821 599 -QFSQIRGTKGYMAPEWAS-NLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR---KILYEE- 672 (736)
Q Consensus 599 -~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~- 672 (736)
.....+||+.|+|||++. +..++.++||||+||++|||++|+.||....... ........... ......
T Consensus 167 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 241 (345)
T d1pmea_ 167 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-----QLNHILGILGSPSQEDLNCII 241 (345)
T ss_dssp CTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHHHCSCCHHHHHTCC
T ss_pred eeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHH-----HHHHHhhhccCCChhhhhhhh
Confidence 234567999999999985 4567999999999999999999999997432110 00000000000 000000
Q ss_pred -cccccccccCccCCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hhcc
Q 041821 673 -EAWIEEIVDPRLKGKFN-----TNQAATLIGIGISCVDEDRSKRPTMDSVVQS--LLEC 724 (736)
Q Consensus 673 -~~~~~~~~d~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~ 724 (736)
................+ +.....+.+|+.+||+.||++|||+.|+++| |+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~ 301 (345)
T d1pmea_ 242 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 301 (345)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred hhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence 00000000000000111 1123468899999999999999999999987 5543
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-35 Score=311.07 Aligned_cols=248 Identities=19% Similarity=0.201 Sum_probs=171.3
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEe------CCe
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSE------GRH 531 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 531 (736)
.+|++.++||+|+||+||+|+. .+|+.||||++.... ...+.+.+|+.+|++++|||||++++++.. ...
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~ 96 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence 3578889999999999999995 469999999996532 334568899999999999999999999964 468
Q ss_pred EEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC----------------ccEEcccCcccccCCCC
Q 041821 532 RLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGS 595 (736)
Q Consensus 532 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~----------------~~kl~DFGla~~~~~~~ 595 (736)
.|+|||||.++.+ +.+. ..+++..++.++.||+.||.|||+.++ .+||+|||+++......
T Consensus 97 ~~iv~Ey~~~~l~-~~~~--~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~ 173 (355)
T d2b1pa1 97 VYLVMELMDANLC-QVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 173 (355)
T ss_dssp EEEEEECCSEEHH-HHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred eEEEEeccchHHH-Hhhh--cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcccccc
Confidence 8999999976544 4443 358999999999999999999997643 67999999998765433
Q ss_pred CcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHH-------H---
Q 041821 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV-------K--- 665 (736)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~--- 665 (736)
. .....||+.|+|||++.+..++.++||||+||+++||++|+.||...... .......... .
T Consensus 174 ~---~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~-----~~~~~i~~~~~~~~~~~~~~~ 245 (355)
T d2b1pa1 174 M---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-----DQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_dssp ----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHHHHCCCCHHHHTTS
T ss_pred c---cccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHH-----HHHHHHHHhccCCCHHHHHHh
Confidence 2 44567999999999999999999999999999999999999999643211 1111110000 0
Q ss_pred ----HHHhhhcc----ccccccccCccCC---CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 666 ----RKILYEEE----AWIEEIVDPRLKG---KFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 666 ----~~~~~~~~----~~~~~~~d~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
........ ............. ......+..+.+|+.+||+.||++|||++||++|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000000 0000011111111 1123456789999999999999999999999987
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-34 Score=306.58 Aligned_cols=248 Identities=21% Similarity=0.238 Sum_probs=175.6
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCccc---ccHHHHHHHHHHHhcCCCCceeeEEEEEEeC-----CeE
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG-----RHR 532 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 532 (736)
++|++.++||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++... ...
T Consensus 18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~ 97 (348)
T d2gfsa1 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 97 (348)
T ss_dssp TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCC
T ss_pred CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCce
Confidence 4688999999999999999994 569999999997543 2345688999999999999999999998643 334
Q ss_pred EEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC----------------CccEEcccCcccccCCCCC
Q 041821 533 LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596 (736)
Q Consensus 533 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~----------------~~~kl~DFGla~~~~~~~~ 596 (736)
++++||+.+|+|.+++... .+++.+++.++.||+.||+|||+++ ..+|++|||++......
T Consensus 98 ~~i~~~~~gg~L~~~~~~~-~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~-- 174 (348)
T d2gfsa1 98 VYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-- 174 (348)
T ss_dssp CEEEEECCSEEHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGG--
T ss_pred EEEEEeecCCchhhhcccc-cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCcc--
Confidence 6677788899999998654 6999999999999999999999763 36899999999755332
Q ss_pred cceeecccccCcccChhcccCCC-CccccceechhHHHHHHHhCCCCCCccccCCccchhHHHHHHHHHHH---HHhhhc
Q 041821 597 SSQFSQIRGTKGYMAPEWASNLP-ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR---KILYEE 672 (736)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 672 (736)
.....||+.|+|||.+.+.. ++.++|||||||++|||++|+.||...... .....+...... ......
T Consensus 175 ---~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~-----~~~~~i~~~~~~~~~~~~~~~ 246 (348)
T d2gfsa1 175 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-----DQLKLILRLVGTPGAELLKKI 246 (348)
T ss_dssp ---GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHHHCCCCHHHHTTC
T ss_pred ---cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHH-----HHHHHHHHhcCCCChHHhhhc
Confidence 34567999999999877654 689999999999999999999999743211 111111100000 000000
Q ss_pred -cccccccccCcc-CCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 041821 673 -EAWIEEIVDPRL-KGKFN-----TNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720 (736)
Q Consensus 673 -~~~~~~~~d~~~-~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 720 (736)
............ ..... ......+.+|+.+||+.||++|||+.|+++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H 301 (348)
T d2gfsa1 247 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301 (348)
T ss_dssp CCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence 000000000000 00001 1123568899999999999999999999986
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=4.3e-31 Score=282.53 Aligned_cols=268 Identities=16% Similarity=0.181 Sum_probs=185.7
Q ss_pred hhhhcccccCeeceeEEEEeee-CCCcEEEEEEeCcccccHHHHHHHHHHHhcCC-----------CCceeeEEEEEEe-
Q 041821 462 STKSFKEELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY-----------HMNLVRMWGFCSE- 528 (736)
Q Consensus 462 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~~- 528 (736)
.+|++.++||+|+||+||+|+. .+|+.||||+++......+.+.+|++++++++ |+||+++++++..
T Consensus 13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence 4589999999999999999995 56999999999876555667888999988875 5789999998864
Q ss_pred -CCeEEEEEecCCCCCHhhh-c--ccCCCCCHHHHHHHHHHHHHHhhhhhc-CCC----------------------ccE
Q 041821 529 -GRHRLLIYEYVEKQSLDKH-L--FSSYFLGWKERFKVALGTAKGLAYLHH-DEF----------------------EPK 581 (736)
Q Consensus 529 -~~~~~lv~e~~~~gsL~~~-l--~~~~~l~~~~~~~i~~~i~~gL~yLH~-~~~----------------------~~k 581 (736)
....+++|+++..+..... . .....+++..+..++.||++||+|||+ .++ .+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~k 172 (362)
T d1q8ya_ 93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK 172 (362)
T ss_dssp ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceee
Confidence 4566677777655543222 2 233478999999999999999999997 422 379
Q ss_pred EcccCcccccCCCCCcceeecccccCcccChhcccCCCCccccceechhHHHHHHHhCCCCCCccccCCccchh-HHHHH
Q 041821 582 IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEA-ELKRF 660 (736)
Q Consensus 582 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p~~~~~~~~~~~~~-~~~~~ 660 (736)
|+|||.+...... ....+||+.|+|||++....++.++||||+||+++||++|+.||............ .....
T Consensus 173 l~dfg~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~ 247 (362)
T d1q8ya_ 173 IADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 247 (362)
T ss_dssp ECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHH
T ss_pred Eeecccccccccc-----cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHH
Confidence 9999999865432 33457999999999999999999999999999999999999998743221111100 01111
Q ss_pred HH-------HHHHHHhhhcccc----ccccccC----------ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 041821 661 VR-------EVKRKILYEEEAW----IEEIVDP----------RLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQ 719 (736)
Q Consensus 661 ~~-------~~~~~~~~~~~~~----~~~~~d~----------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 719 (736)
.. ............+ ....+.. .............+.+|+.+||+.||++|||++|+++
T Consensus 248 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~ 327 (362)
T d1q8ya_ 248 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 327 (362)
T ss_dssp HHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred HHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 0000000000000 0000000 0112345677889999999999999999999999999
Q ss_pred H--HhcccccccccccC
Q 041821 720 S--LLECETESEIHITD 734 (736)
Q Consensus 720 ~--L~~~~~~~~~~~~~ 734 (736)
| +++.....+..+++
T Consensus 328 Hp~f~~~~~~~~~~~p~ 344 (362)
T d1q8ya_ 328 HPWLKDTLGMEEIRVPD 344 (362)
T ss_dssp CGGGTTCTTCTTCCCTT
T ss_pred CcccCCCCCcccCCCCC
Confidence 7 76665555555544
|
| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=99.70 E-value=1.9e-17 Score=143.93 Aligned_cols=102 Identities=23% Similarity=0.352 Sum_probs=87.4
Q ss_pred EEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCCC-cceEEEccCCCeEEEccCCceee
Q 041821 18 SIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTG-ADRAELLDTGNLVLKDRHGKILW 96 (736)
Q Consensus 18 giw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~~-~~~a~LldsGNlVl~~~~~~~lW 96 (736)
-|||..+++++.+|++|++.|+.....+|.+..||||+|.+. +.++|++++...+ ...|+|+|+|||||+|.++++||
T Consensus 11 ~il~~~~~~~~~~~~l~~~q~l~~g~y~L~~q~DGNLvL~~~-~~~vW~s~t~~~~~~~~~~l~~~GnLvl~d~~~~~lW 89 (120)
T d1dlpa2 11 SILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDR-DDRVWSTNTAGKGTGCRAVLQPNGRMDVLTNQNIAVW 89 (120)
T ss_dssp EECCCC--CCCCCCEECSSCCCBCSSCEEEEETTTEEEEEBT-TBCCSCCCCCSSCSSCEEEEETTTEEEEEETTTEEEE
T ss_pred eEEEcCCCCCCcccEEcCCCeeEcCCEEEEEcCCCcEEEecC-CcEEEEEccccCCCcEEEEEeCCeeEEEEcCCCCEEE
Confidence 399999999999999999999976667999999999999986 6788999876443 46799999999999999999999
Q ss_pred eecCCCCCccCCCcccCCCceEEecCCCCCCCCCcceEEEcCCCceEEE
Q 041821 97 QSFDYPTDTLLPNQVFRKSTKLISGVGNGTYASGYFSLYFDNDNVLRLI 145 (736)
Q Consensus 97 qSFd~PTDTlLpg~~l~~~~~L~S~~s~~d~s~G~~~l~~~~~g~~~~~ 145 (736)
|||. +.++|.|.|.++++|.+.++
T Consensus 90 ~S~t-------------------------~~~~~~~~l~Lq~DGnlvlY 113 (120)
T d1dlpa2 90 TSGN-------------------------SRSAGRYVFVLQPDRNLAIY 113 (120)
T ss_dssp ECCC-------------------------CCSSSCCEEEECSSSCEEEE
T ss_pred EeCC-------------------------CCCCCcEEEEECCCCcEEEe
Confidence 9984 24578899999999999875
|
| >d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Gastrodianin (antifungal protein) species: Gastrodia elata [TaxId: 91201]
Probab=99.65 E-value=2.7e-16 Score=135.57 Aligned_cols=93 Identities=16% Similarity=0.334 Sum_probs=74.9
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCC-CCCcceEEE
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTT-STGADRAEL 79 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~-~~~~~~a~L 79 (736)
|.|+|+|...+ + |.|+. ..++||.||++.|. .++.+.|..+|+|+|.|.+ ..+|+++++ ..+...|+|
T Consensus 19 g~~~l~~q~DG--N--Lvly~----~~~~vW~s~~~~~~--~~~~l~l~~dGnLvl~~~~-~~~w~s~t~~~~~~~~l~L 87 (112)
T d1xd5a_ 19 GGYLFIIQNDC--N--LVLYD----NNRAVWASGTNGKA--SGCVLKMQNDGNLVIYSGS-RAIWASNTNRQNGNYYLIL 87 (112)
T ss_dssp TTEEEEECTTS--C--EEEEE----TTEEEEECCCTTSC--SSEEEEECTTSCEEEEETT-EEEEECCCCCSCCCCEEEE
T ss_pred CCEEEEEcCCC--C--EEEEc----CCcEEEEccCccCC--CCcEEEEeccccEEEEecC-CeEEEEeeccCCCceEEEE
Confidence 67999997644 2 34554 35899999999885 4578999999999999974 556666654 344568999
Q ss_pred ccCCCeEEEccCCceeeeecCCCCC
Q 041821 80 LDTGNLVLKDRHGKILWQSFDYPTD 104 (736)
Q Consensus 80 ldsGNlVl~~~~~~~lWqSFd~PTD 104 (736)
+|+|||||++.++.++|||+.+|++
T Consensus 88 ~ddGNlvly~~~~~~~W~S~t~~~n 112 (112)
T d1xd5a_ 88 QRDRNVVIYDNSNNAIWATHTNVGN 112 (112)
T ss_dssp CTTSCEEEECTTSCEEEECCCCCCC
T ss_pred cCCCCEEEECCCCcEEecCCCccCC
Confidence 9999999999999999999999986
|
| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Garlic (Allium sativum) [TaxId: 4682]
Probab=99.63 E-value=7.8e-16 Score=131.33 Aligned_cols=89 Identities=20% Similarity=0.417 Sum_probs=72.4
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCC-CCCcceEEE
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTT-STGADRAEL 79 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~-~~~~~~a~L 79 (736)
|.|.|+|...+ + |.++. ..++||+||++.|.. .++.|.|..+|+|+|.|++|.+||+++++ +.+...|+|
T Consensus 19 g~~~l~~q~dg--n--Lvl~~----~~~~vW~ant~~~~~-~~~~l~l~~dGnLvl~~~~g~~vW~s~t~~~~~~~~l~L 89 (109)
T d1kj1a_ 19 EPYHFIMQEDC--N--LVLYD----HSTSVWASNTGILGK-KGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVL 89 (109)
T ss_dssp TTEEEEECTTS--C--EEEEE----TTEEEEECCCCCTTC-CCCEEEECTTSCEEEECSSSCEEEECCCCCCSSCCEEEE
T ss_pred CCEEEEecCCC--e--EEEEe----CCEEEEEeCCCCCCc-eeEEEEEcCCceEEEEeCCCcEEEEEeeECCCCCEEEEE
Confidence 57889986533 2 33443 357899999999985 56789999999999999999999999976 344567999
Q ss_pred ccCCCeEEEccCCceeeeecCC
Q 041821 80 LDTGNLVLKDRHGKILWQSFDY 101 (736)
Q Consensus 80 ldsGNlVl~~~~~~~lWqSFd~ 101 (736)
+|+|||||++ ..+|||+.|
T Consensus 90 ~ddGNlvly~---~~~W~S~t~ 108 (109)
T d1kj1a_ 90 QEDGNVVIYG---SDIWSTGTY 108 (109)
T ss_dssp CTTSCEEEEC---CEEEECCCC
T ss_pred eCCCcEEEEC---CCEecCCCc
Confidence 9999999996 469999976
|
| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Snowdrop (Galanthus nivalis) [TaxId: 4670]
Probab=99.60 E-value=1.3e-15 Score=129.91 Aligned_cols=88 Identities=16% Similarity=0.246 Sum_probs=72.1
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCCC-cceEEE
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTG-ADRAEL 79 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~~-~~~a~L 79 (736)
|.|.|.|...+ + |.|+.. .++||.||++.|- .+..+.+..+|+|+|.|++|.+||++++.... ...|+|
T Consensus 19 g~~~l~~q~DG--N--Lvly~~----~~~vW~s~~~~~~--~~~~l~l~~~Gnlvl~~~~g~~vWsS~t~~~~~~~~l~L 88 (108)
T d1jpca_ 19 GSFVFIMQEDC--N--LVLYDV----DKPIWATNTGGLS--RSCFLSMQTDGNLVVYNPSNKPIWASNTGGQNGNYVCIL 88 (108)
T ss_dssp TTEEEEECTTS--C--EEEEET----TEEEEECCCTTSC--SSCEEEECTTSCEEEECTTCCEEEECCCCCSCSCEEEEE
T ss_pred CCEEEEECCCC--e--EEEEeC----CceeeEeCCCCCC--CccEEEEeccceEEEECCCccceEEccccCCCCcEEEEE
Confidence 67889887654 2 456653 4789999999884 45789999999999999999999999976443 346899
Q ss_pred ccCCCeEEEccCCceeeeecCC
Q 041821 80 LDTGNLVLKDRHGKILWQSFDY 101 (736)
Q Consensus 80 ldsGNlVl~~~~~~~lWqSFd~ 101 (736)
+|+|||||++. .+||||+|
T Consensus 89 ~ddGNlVly~~---~~W~S~t~ 107 (108)
T d1jpca_ 89 QKDRNVVIYGT---DRWATGTH 107 (108)
T ss_dssp CTTSCEEEEEC---CCCCCCCC
T ss_pred cCCCCEEEeCC---CcccCCCC
Confidence 99999999964 59999998
|
| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=99.60 E-value=3.1e-16 Score=134.57 Aligned_cols=110 Identities=23% Similarity=0.344 Sum_probs=94.0
Q ss_pred EEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCCCcceEEEccCCCeEEEccCCceeeee
Q 041821 19 IWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGADRAELLDTGNLVLKDRHGKILWQS 98 (736)
Q Consensus 19 iw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~~~~~a~LldsGNlVl~~~~~~~lWqS 98 (736)
|||.-.++.+..|+.+.+.++.+...+|.+..||||||.++ +.++|++++.+..+..|.|+|+|||||++.++.+||||
T Consensus 3 ~~~~~~~~~~~~~tl~~~~~l~~g~~~l~~q~DGNLvL~~~-~~~vW~s~t~~~~~~~l~l~~dGNLvl~d~~~~~vWsS 81 (115)
T d1dlpa1 3 ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDS-DVRVWASNTAGATGCRAVLQSDGLLVILTAQNTIRWSS 81 (115)
T ss_dssp CCBCSSSSSCSCSCCCTTCEECSTTEEEEECTTSCEEEEES-SSEEECCCCCSCSCCBCCBCSSSCBCCBCTTTCCSCCC
T ss_pred EEEecCCCCCCcceecCCCcEEcCCEEEEECCCCeEEEEcC-CeeEEEcccCCCCceEEEEeccCCEEEEccCCCEEEEc
Confidence 78876677888999999999987677899999999999984 67899999876677889999999999999999999998
Q ss_pred cCCCCCccCCCcccCCCceEEecCCCCCCCCCcceEEEcCCCceEEEecCCCccceecCCCC
Q 041821 99 FDYPTDTLLPNQVFRKSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPD 160 (736)
Q Consensus 99 Fd~PTDTlLpg~~l~~~~~L~S~~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~yw~~~~ 160 (736)
+. +.+.|.|.|.++++|.+.++ . ..+|.+++
T Consensus 82 ~t-------------------------~~~~g~y~l~Lq~DGNlvlY-~-----~~~Wssgt 112 (115)
T d1dlpa1 82 GT-------------------------KGSIGNYVLVLQPDRTVTIY-G-----PGLWDSGT 112 (115)
T ss_dssp CC-------------------------CCCSSCCEEEECSSSCEEEE-C-----SEEEECSC
T ss_pred CC-------------------------CCCCCCEEEEECCCCcEEEe-C-----CCeecCCC
Confidence 74 34588999999999999765 2 35887664
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.55 E-value=5.5e-16 Score=148.21 Aligned_cols=146 Identities=13% Similarity=0.080 Sum_probs=104.5
Q ss_pred hcccccCeeceeEEEEeeeCCCcEEEEEEeCcccc-------------------cHHHHHHHHHHHhcCCCCceeeEEEE
Q 041821 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQ-------------------GEEVFWAEVSTIGKIYHMNLVRMWGF 525 (736)
Q Consensus 465 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-------------------~~~~~~~E~~~l~~l~h~niv~l~~~ 525 (736)
.+.++||+|+||+||+|+..+|+.||||+++.... ......+|+..+.++.|++++..+++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~ 82 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW 82 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence 45689999999999999988899999998743110 01234568899999999999998865
Q ss_pred EEeCCeEEEEEecCCCCCHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCCC---------------ccEEcccCcccc
Q 041821 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF---------------EPKIADFGLAKL 590 (736)
Q Consensus 526 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~~---------------~~kl~DFGla~~ 590 (736)
. ..+++|||+++..+.+ ++...+..++.|++++|.|||+.++ .++|+|||+|+.
T Consensus 83 ~----~~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~~~liDFG~a~~ 151 (191)
T d1zara2 83 E----GNAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEGIWIIDFPQSVE 151 (191)
T ss_dssp E----TTEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTEEEECCCTTCEE
T ss_pred c----CCEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCCCEEEEECCCccc
Confidence 3 2379999998766543 3344567899999999999997633 579999999976
Q ss_pred cCCCCCcceeecccccCcccC------hhcccCCCCccccceechhHH
Q 041821 591 SQRGSNSSQFSQIRGTKGYMA------PEWASNLPITAKVDVYSYGVV 632 (736)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~a------PE~~~~~~~~~~~DvwS~Gvv 632 (736)
....... .|.. .|.+ .+.|+.++|+||..--
T Consensus 152 ~~~~~~~----------~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~ 188 (191)
T d1zara2 152 VGEEGWR----------EILERDVRNIITYF-SRTYRTEKDINSAIDR 188 (191)
T ss_dssp TTSTTHH----------HHHHHHHHHHHHHH-HHHHCCCCCHHHHHHH
T ss_pred CCCCCcH----------HHHHHHHHHHHHHH-cCCCCCcccHHHHHHH
Confidence 5432211 1111 1112 3568889999997543
|
| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=99.24 E-value=1.7e-11 Score=105.34 Aligned_cols=88 Identities=16% Similarity=0.342 Sum_probs=68.2
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCCC-cceEEE
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTG-ADRAEL 79 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~~-~~~a~L 79 (736)
|.|.|.|-..| +. +.|. ..++||.||+..|. ....|.+..+|+|+|.|++|.+||++++.... ...|+|
T Consensus 30 ~~y~l~mQ~DG--NL---VLy~---~~~~vWssnt~~~~--~~~~l~l~~dGnLvL~d~~g~~vWsS~t~~~~~~~~l~L 99 (119)
T d1b2pa_ 30 HVYRFIMQTDC--NL---VLYD---NNNPIWATNTGGLG--NGCRAVLQPDGVLVVITNENVTVWQSPVAGKAGHYVLVL 99 (119)
T ss_dssp EEEEEEECTTS--CE---EEEE---TTEEEEECCCTTSC--SSCEEEECTTSCEEEECTTCCEEEECSCCCCSSCEEEEE
T ss_pred ceEEEEECCCC--cE---EEEE---CCeEEEEecCCCCC--cceEEEEEeCCCEEEECCCCcEEEECCCcCCCCceEEEE
Confidence 35777765433 32 3353 35789999998774 35789999999999999999999999876433 456999
Q ss_pred ccCCCeEEEccCCceeeeecCC
Q 041821 80 LDTGNLVLKDRHGKILWQSFDY 101 (736)
Q Consensus 80 ldsGNlVl~~~~~~~lWqSFd~ 101 (736)
+|+|||||++ .++|||-.+
T Consensus 100 q~DGNlvlYg---~~~W~S~T~ 118 (119)
T d1b2pa_ 100 QPDRNVVIYG---DALWATQTV 118 (119)
T ss_dssp CTTSCEEEEE---SEEEECCCC
T ss_pred cCCCCEEEEC---CCEeccCCc
Confidence 9999999995 589999753
|
| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=98.88 E-value=9e-10 Score=93.68 Aligned_cols=86 Identities=21% Similarity=0.372 Sum_probs=66.2
Q ss_pred CceEeeeEecCCCCeEEEEEEcCCCCCceEEEecCCCCCCCCCceEEEeeCCcEEEEeCCCcEEEeCCCCCC-CcceEEE
Q 041821 1 KTFSCGFYGLGGNAYLFSIWFTHSRDRTVVWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTST-GADRAEL 79 (736)
Q Consensus 1 ~~F~~GF~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~l~~~G~L~l~~~~~~~vWstn~~~~-~~~~a~L 79 (736)
|.|.|.|...| + |.|+. ..++||.+|...+ ..+.+.|..+|+|||.|.++.+||++++... ....++|
T Consensus 26 g~~~l~~q~DG--N--LvL~~----~~~~vW~s~t~~~---~~~~l~l~~dGNLvl~d~~~~~vWsS~t~~~~g~y~l~L 94 (115)
T d1dlpa1 26 SSFRFTMQSDC--N--LVLFD----SDVRVWASNTAGA---TGCRAVLQSDGLLVILTAQNTIRWSSGTKGSIGNYVLVL 94 (115)
T ss_dssp TTEEEEECTTS--C--EEEEE----SSSEEECCCCCSC---SCCBCCBCSSSCBCCBCTTTCCSCCCCCCCCSSCCEEEE
T ss_pred CCEEEEECCCC--e--EEEEc----CCeeEEEcccCCC---CceEEEEeccCCEEEEccCCCEEEEcCCCCCCCCEEEEE
Confidence 56778776533 2 34554 2478999997643 4578899999999999999999999988643 3457999
Q ss_pred ccCCCeEEEccCCceeeeecC
Q 041821 80 LDTGNLVLKDRHGKILWQSFD 100 (736)
Q Consensus 80 ldsGNlVl~~~~~~~lWqSFd 100 (736)
.++|||||++ ..+|+|-.
T Consensus 95 q~DGNlvlY~---~~~Wssgt 112 (115)
T d1dlpa1 95 QPDRTVTIYG---PGLWDSGT 112 (115)
T ss_dssp CSSSCEEEEC---SEEEECSC
T ss_pred CCCCcEEEeC---CCeecCCC
Confidence 9999999994 57999864
|
| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Snowdrop (Galanthus nivalis) [TaxId: 4670]
Probab=98.86 E-value=1e-08 Score=86.38 Aligned_cols=76 Identities=25% Similarity=0.353 Sum_probs=62.0
Q ss_pred ceEEEeeCCcEEEEeCCCcEEEeCCCCCCC-cceEEEccCCCeEEEccCCceeeeecCCCCCccCCCcccCCCceEEecC
Q 041821 44 SRASLRRNGAMVLTDVDDTVIWMTNTTSTG-ADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLISGV 122 (736)
Q Consensus 44 ~~l~l~~~G~L~l~~~~~~~vWstn~~~~~-~~~a~LldsGNlVl~~~~~~~lWqSFd~PTDTlLpg~~l~~~~~L~S~~ 122 (736)
-+|.+-.||||||.+. +.+||++++.+.. ...++|.++|||||++.++.++|+|-
T Consensus 21 ~~l~~q~DGNLvly~~-~~~vW~s~~~~~~~~~~l~l~~~Gnlvl~~~~g~~vWsS~----------------------- 76 (108)
T d1jpca_ 21 FVFIMQEDCNLVLYDV-DKPIWATNTGGLSRSCFLSMQTDGNLVVYNPSNKPIWASN----------------------- 76 (108)
T ss_dssp EEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECC-----------------------
T ss_pred EEEEECCCCeEEEEeC-CceeeEeCCCCCCCccEEEEeccceEEEECCCccceEEcc-----------------------
Confidence 4677889999999984 6889999987543 45799999999999999999999861
Q ss_pred CCCCCCCCcceEEEcCCCceEEE
Q 041821 123 GNGTYASGYFSLYFDNDNVLRLI 145 (736)
Q Consensus 123 s~~d~s~G~~~l~~~~~g~~~~~ 145 (736)
+..+.+.|.+.++.+|.+.++
T Consensus 77 --t~~~~~~~~l~L~ddGNlVly 97 (108)
T d1jpca_ 77 --TGGQNGNYVCILQKDRNVVIY 97 (108)
T ss_dssp --CCCSCSCEEEEECTTSCEEEE
T ss_pred --ccCCCCcEEEEEcCCCCEEEe
Confidence 112356788999999999876
|
| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Garlic (Allium sativum) [TaxId: 4682]
Probab=98.85 E-value=1e-08 Score=86.47 Aligned_cols=77 Identities=26% Similarity=0.457 Sum_probs=61.8
Q ss_pred CceEEEeeCCcEEEEeCCCcEEEeCCCCC--CCcceEEEccCCCeEEEccCCceeeeecCCCCCccCCCcccCCCceEEe
Q 041821 43 GSRASLRRNGAMVLTDVDDTVIWMTNTTS--TGADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLIS 120 (736)
Q Consensus 43 ~~~l~l~~~G~L~l~~~~~~~vWstn~~~--~~~~~a~LldsGNlVl~~~~~~~lWqSFd~PTDTlLpg~~l~~~~~L~S 120 (736)
.-.|.+-.||||+|.+ .+.+||++|+.. .....+.|.++|||||++.++.++|+|-.
T Consensus 20 ~~~l~~q~dgnLvl~~-~~~~vW~ant~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~s~t-------------------- 78 (109)
T d1kj1a_ 20 PYHFIMQEDCNLVLYD-HSTSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASHS-------------------- 78 (109)
T ss_dssp TEEEEECTTSCEEEEE-TTEEEEECCCCCTTCCCCEEEECTTSCEEEECSSSCEEEECCC--------------------
T ss_pred CEEEEecCCCeEEEEe-CCEEEEEeCCCCCCceeEEEEEcCCceEEEEeCCCcEEEEEee--------------------
Confidence 3567788999999987 568899999863 33567999999999999999999998721
Q ss_pred cCCCCCCCCCcceEEEcCCCceEEE
Q 041821 121 GVGNGTYASGYFSLYFDNDNVLRLI 145 (736)
Q Consensus 121 ~~s~~d~s~G~~~l~~~~~g~~~~~ 145 (736)
....|.|.+.++++|.+.++
T Consensus 79 -----~~~~~~~~l~L~ddGNlvly 98 (109)
T d1kj1a_ 79 -----VRGNGNYVLVLQEDGNVVIY 98 (109)
T ss_dssp -----CCCSSCCEEEECTTSCEEEE
T ss_pred -----ECCCCCEEEEEeCCCcEEEE
Confidence 12256789999999999875
|
| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=98.84 E-value=1.2e-08 Score=87.29 Aligned_cols=84 Identities=26% Similarity=0.398 Sum_probs=65.3
Q ss_pred eEEEeeCCcEEEEeCCCcEEEeCCCCCC-CcceEEEccCCCeEEEccCCceeeeecCCCCCccCCCcccCCCceEEecCC
Q 041821 45 RASLRRNGAMVLTDVDDTVIWMTNTTST-GADRAELLDTGNLVLKDRHGKILWQSFDYPTDTLLPNQVFRKSTKLISGVG 123 (736)
Q Consensus 45 ~l~l~~~G~L~l~~~~~~~vWstn~~~~-~~~~a~LldsGNlVl~~~~~~~lWqSFd~PTDTlLpg~~l~~~~~L~S~~s 123 (736)
+|.+-.||||||.++ +.++|++++.+. .+..+.|.++|||||+|.++.++|+|..
T Consensus 33 ~l~mQ~DGNLVLy~~-~~~vWssnt~~~~~~~~l~l~~dGnLvL~d~~g~~vWsS~t----------------------- 88 (119)
T d1b2pa_ 33 RFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQSPV----------------------- 88 (119)
T ss_dssp EEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECSC-----------------------
T ss_pred EEEECCCCcEEEEEC-CeEEEEecCCCCCcceEEEEEeCCCEEEECCCCcEEEECCC-----------------------
Confidence 455668999999975 578999998744 3568999999999999999999998642
Q ss_pred CCCCCCCcceEEEcCCCceEEEecCCCccceecCCCC
Q 041821 124 NGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPD 160 (736)
Q Consensus 124 ~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~yw~~~~ 160 (736)
.-+.|.|.+.++++|.+.++ . ...|.+++
T Consensus 89 --~~~~~~~~l~Lq~DGNlvlY-g-----~~~W~S~T 117 (119)
T d1b2pa_ 89 --AGKAGHYVLVLQPDRNVVIY-G-----DALWATQT 117 (119)
T ss_dssp --CCCSSCEEEEECTTSCEEEE-E-----SEEEECCC
T ss_pred --cCCCCceEEEEcCCCCEEEE-C-----CCEeccCC
Confidence 12356789999999999875 1 24676654
|
| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=98.67 E-value=3.3e-08 Score=84.68 Aligned_cols=108 Identities=20% Similarity=0.249 Sum_probs=64.8
Q ss_pred CCeEEEccCCceee--eecCCCCCccCCCcccCCCceEEecCCCCCCCCCcceEEEcCCCceEEEecCCCccceecCCCC
Q 041821 83 GNLVLKDRHGKILW--QSFDYPTDTLLPNQVFRKSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPD 160 (736)
Q Consensus 83 GNlVl~~~~~~~lW--qSFd~PTDTlLpg~~l~~~~~L~S~~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~yw~~~~ 160 (736)
||+|+++..+.++| +|+|.|+++|.++|.|. .|.|+|.|+.+|.+.++..+ ..+|.+..
T Consensus 1 g~~v~~~~~n~il~~~~~~~~~~~~l~~~q~l~---------------~g~y~L~~q~DGNLvL~~~~----~~vW~s~t 61 (120)
T d1dlpa2 1 GSVVVANNGNSILYSTQGNDNHPQTLHATQSLQ---------------LSPYRLSMETDCNLVLFDRD----DRVWSTNT 61 (120)
T ss_dssp SCCCCSSCCCEECCCC--CCCCCCEECSSCCCB---------------CSSCEEEEETTTEEEEEBTT----BCCSCCCC
T ss_pred CcEEEEeCCCeEEEcCCCCCCcccEEcCCCeeE---------------cCCEEEEEcCCCcEEEecCC----cEEEEEcc
Confidence 45555555555555 67899999999999874 57799999999999876432 46787654
Q ss_pred CCccccCcccccccceEeecCCCcccc---CCceEEEEeecCCceEEEEEEccCccEEEE
Q 041821 161 FDVFQNGRTKYNSSRIAVLDDFGSFSS---SDELKFSAIDMGFGIKRRLTMDYDGNLRLY 217 (736)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~rl~l~~~G~l~~~ 217 (736)
...... ....+...|.+.. .....+..........++++|++||+|++|
T Consensus 62 ~~~~~~--------~~~~l~~~GnLvl~d~~~~~lW~S~t~~~~~~~~l~Lq~DGnlvlY 113 (120)
T d1dlpa2 62 AGKGTG--------CRAVLQPNGRMDVLTNQNIAVWTSGNSRSAGRYVFVLQPDRNLAIY 113 (120)
T ss_dssp CSSCSS--------CEEEEETTTEEEEEETTTEEEEECCCCCSSSCCEEEECSSSCEEEE
T ss_pred ccCCCc--------EEEEEeCCeeEEEEcCCCCEEEEeCCCCCCCcEEEEECCCCcEEEe
Confidence 321111 1122333333221 112223322222233468999999999998
|
| >d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Gastrodianin (antifungal protein) species: Gastrodia elata [TaxId: 91201]
Probab=98.51 E-value=1.5e-07 Score=79.70 Aligned_cols=109 Identities=16% Similarity=0.194 Sum_probs=69.9
Q ss_pred CCccCCCcccCCCceEEecCCCCCCCCCcceEEEcCCCceEEEecCCCccceecCCCCCCccccCcccccccceEeecCC
Q 041821 103 TDTLLPNQVFRKSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFDVFQNGRTKYNSSRIAVLDDF 182 (736)
Q Consensus 103 TDTlLpg~~l~~~~~L~S~~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (736)
||||+|||.|..+..|++ |.|.|.|+.+|.+.++..+ .++|......... .....+...
T Consensus 1 tDtL~~gq~L~~g~~l~~---------g~~~l~~q~DGNLvly~~~----~~vW~s~~~~~~~--------~~~l~l~~d 59 (112)
T d1xd5a_ 1 SDRLNSGHQLDTGGSLAE---------GGYLFIIQNDCNLVLYDNN----RAVWASGTNGKAS--------GCVLKMQND 59 (112)
T ss_dssp CCEEETTEEECTTCEEEE---------TTEEEEECTTSCEEEEETT----EEEEECCCTTSCS--------SEEEEECTT
T ss_pred CCEecCCCEecCCCEEEE---------CCEEEEEcCCCCEEEEcCC----cEEEEccCccCCC--------CcEEEEecc
Confidence 799999999999999964 8999999999999886543 4678765432111 112334444
Q ss_pred Ccccc--CCceEEEEeecCCceEEEEEEccCccEEEEEecCCCCceEEEeeeccCCC
Q 041821 183 GSFSS--SDELKFSAIDMGFGIKRRLTMDYDGNLRLYSLNKVTGSWMISWQALMQPG 237 (736)
Q Consensus 183 ~~~~~--~~~~~~~~~~~~~~~~~rl~l~~~G~l~~~~w~~~~~~W~~~~~~p~~~C 237 (736)
|.+.. .....+..........++++|..||+|++|.- .....|+...+.|
T Consensus 60 GnLvl~~~~~~~w~s~t~~~~~~~~l~L~ddGNlvly~~-----~~~~~W~S~t~~~ 111 (112)
T d1xd5a_ 60 GNLVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVIYDN-----SNNAIWATHTNVG 111 (112)
T ss_dssp SCEEEEETTEEEEECCCCCSCCCCEEEECTTSCEEEECT-----TSCEEEECCCCCC
T ss_pred ccEEEEecCCeEEEEeeccCCCceEEEEcCCCCEEEECC-----CCcEEecCCCccC
Confidence 43321 12222222222233456899999999999841 2245687766665
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=94.85 E-value=0.021 Score=54.53 Aligned_cols=107 Identities=10% Similarity=-0.007 Sum_probs=73.5
Q ss_pred hcccccCeeceeEEEEeeeCCCcEEEEEEeCccc-ccHHHHHHHHHHHhcCC-CCceeeEEEEEEeCCeEEEEEecCCCC
Q 041821 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH-QGEEVFWAEVSTIGKIY-HMNLVRMWGFCSEGRHRLLIYEYVEKQ 542 (736)
Q Consensus 465 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 542 (736)
...+..+-++.+.||+... +++.++||+..... .....+.+|...+..+. +--+.+++.+..+++..++|||++++.
T Consensus 17 ~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~ 95 (263)
T d1j7la_ 17 RCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGV 95 (263)
T ss_dssp EEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSE
T ss_pred EEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccc
Confidence 3344433344568998875 45667888876433 23334677888877664 444677888888899999999999998
Q ss_pred CHhhhcccCCCCCHHHHHHHHHHHHHHhhhhhcCC
Q 041821 543 SLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDE 577 (736)
Q Consensus 543 sL~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~ 577 (736)
.+.+..... .....++.++++.|..||+..
T Consensus 96 ~~~~~~~~~-----~~~~~~~~~l~~~l~~lH~~~ 125 (263)
T d1j7la_ 96 LCSEEYEDE-----QSPEKIIELYAECIRLFHSID 125 (263)
T ss_dssp EHHHHTTTC-----SCHHHHHHHHHHHHHHHHTSC
T ss_pred ccccccccc-----ccHHHHHHHHHHHHHHHhccC
Confidence 887655322 223456788888899999753
|
| >d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: EGF-type module domain: Fibrillin-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.74 E-value=0.0063 Score=37.12 Aligned_cols=31 Identities=32% Similarity=0.748 Sum_probs=25.1
Q ss_pred CCCCCCCCCCCCcccccCCCC-cCCCCCCCCcC
Q 041821 235 QPGKVHGVCGKNGICVYTPEP-KCSCPPGYEAT 266 (736)
Q Consensus 235 ~~Cd~~~~CG~~g~C~~~~~~-~C~C~~GF~~~ 266 (736)
|.|.+-..|| +|.|+.--.. -|.|-.||+|.
T Consensus 2 dECsignpCG-nGTCtNviGgFec~C~~GFepg 33 (39)
T d1emoa2 2 DECSVGNPCG-NGTCKNVIGGFECTCEEGFEPG 33 (39)
T ss_dssp CGGGTTCSSS-SSCEEECSSSEEECCSSSSCCC
T ss_pred CccccCCccC-CceeeecccceEEeecCCcCCC
Confidence 6899999999 7889655444 49999999984
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=90.94 E-value=0.26 Score=46.09 Aligned_cols=98 Identities=15% Similarity=0.038 Sum_probs=66.8
Q ss_pred cCeec-eeEEEEeeeCCCcEEEEEEeCcccccHHHHHHHHHHHhcCC--CCceeeEEEEEEeCCeEEEEEecCCCCCHhh
Q 041821 470 LGRGG-SGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY--HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDK 546 (736)
Q Consensus 470 lG~G~-fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 546 (736)
+..|. -+.||+.....+..+++|.-..... ..+..|+..|+.+. .-.+.+++.+..+++..++|||++++.++.+
T Consensus 18 ~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~--~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~ 95 (255)
T d1nd4a_ 18 QTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL--NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS 95 (255)
T ss_dssp CSCTTSSCEEEEEECTTSCCEEEEEECSCTT--SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETTT
T ss_pred cCCcccCCeEEEEEeCCCCEEEEEeCCccCH--hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccccc
Confidence 33443 3679999887788889998754332 23566777777663 3346778888888889999999999877654
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHhhhhhcCC
Q 041821 547 HLFSSYFLGWKERFKVALGTAKGLAYLHHDE 577 (736)
Q Consensus 547 ~l~~~~~l~~~~~~~i~~~i~~gL~yLH~~~ 577 (736)
.. ... ..++.++++.|.-||.-.
T Consensus 96 ~~-----~~~---~~~~~~l~~~la~LH~~~ 118 (255)
T d1nd4a_ 96 SH-----LAP---AEKVSIMADAMRRLHTLD 118 (255)
T ss_dssp SC-----CCH---HHHHHHHHHHHHHHTTSC
T ss_pred cc-----ccH---HHHHHHHHHHHHHHccCC
Confidence 22 222 234567778888889653
|
| >d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: EGF-type module domain: Neurogenic locus notch homolog protein 1, Notch1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.60 E-value=0.12 Score=33.60 Aligned_cols=30 Identities=27% Similarity=0.651 Sum_probs=23.6
Q ss_pred CCCCC-CCCCCCCcccccCCC-CcCCCCCCCC
Q 041821 235 QPGKV-HGVCGKNGICVYTPE-PKCSCPPGYE 264 (736)
Q Consensus 235 ~~Cd~-~~~CG~~g~C~~~~~-~~C~C~~GF~ 264 (736)
|.|.. ...|...|.|..... -.|.|++||+
T Consensus 4 deC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~ 35 (42)
T d2vj3a1 4 DECSLGANPCEHAGKCINTLGSFECQCLQGYT 35 (42)
T ss_dssp CTTTSSSCSSSTTCEEEECSSSEEEECCTTEE
T ss_pred ccccCCCCCCCCCcEeECCCCCEEeECCCCCc
Confidence 56765 468999999976644 4599999996
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=81.56 E-value=0.93 Score=45.48 Aligned_cols=105 Identities=15% Similarity=0.062 Sum_probs=60.1
Q ss_pred cccCeeceeEEEEeeeCC-CcEEEEEEeCcc--------cccHHHHHHHHHHHhcCC---CCceeeEEEEEEeCCeEEEE
Q 041821 468 EELGRGGSGAVYKGVLAD-GRAVAVKRLGDL--------HQGEEVFWAEVSTIGKIY---HMNLVRMWGFCSEGRHRLLI 535 (736)
Q Consensus 468 ~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv 535 (736)
+.||.|....||+....+ ++.++||.-... .....+...|...|+.+. ...+.+++.+ +++..++|
T Consensus 32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lv 109 (392)
T d2pula1 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 109 (392)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEEE
Confidence 468999999999998654 678999975321 111233456777776652 2345666654 45566899
Q ss_pred EecCCCCCH-hhhcccCCCCCHHHHHHHHHHHHHHhhhhhc
Q 041821 536 YEYVEKQSL-DKHLFSSYFLGWKERFKVALGTAKGLAYLHH 575 (736)
Q Consensus 536 ~e~~~~gsL-~~~l~~~~~l~~~~~~~i~~~i~~gL~yLH~ 575 (736)
||++++..+ ...+.... .....+..+...+++-+.+.|+
T Consensus 110 mE~L~~~~~~~~~l~~~~-~~~~~a~~lg~~La~~h~~~~~ 149 (392)
T d2pula1 110 MEDLSHLKIARKGLIEGE-NYPHLSQHIGEFLGKTLFYSSD 149 (392)
T ss_dssp ECCCTTSEEHHHHHHHTC-CCTTHHHHHHHHHHHHHHHTST
T ss_pred EeccCCcccchhhhcccc-hhHHHHHHHHHHHHHHHHHhcc
Confidence 999987554 33332222 2233344444445554444443
|
| >d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: EGF-type module domain: Fibrillin-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.50 E-value=0.45 Score=30.93 Aligned_cols=31 Identities=35% Similarity=0.628 Sum_probs=23.0
Q ss_pred cCCCCCCCCCCCCcccccCCC-CcCCCCCCCCc
Q 041821 234 MQPGKVHGVCGKNGICVYTPE-PKCSCPPGYEA 265 (736)
Q Consensus 234 ~~~Cd~~~~CG~~g~C~~~~~-~~C~C~~GF~~ 265 (736)
.|+|... .|+..+.|..+.. -.|.|++||+.
T Consensus 5 idEC~~~-~~~~~~~C~Nt~Gsy~C~C~~Gy~~ 36 (43)
T d1emoa1 5 MDECKEP-DVCKHGQCINTDGSYRCECPFGYIL 36 (43)
T ss_dssp CCSSSST-TSCSSSCCCCCSSCCCCCCCTTEEE
T ss_pred eeccCCc-CCCCCCEeECCCCCeEeECCCCccc
Confidence 3778755 4556889977654 45999999975
|